mRNA_L-elsbetiae_contig11146.1031.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11146.1031.1
Unique NamemRNA_L-elsbetiae_contig11146.1031.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: D7FYJ6_ECTSI (Non-specific serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ6_ECTSI)

HSP 1 Score: 528 bits (1360), Expect = 3.000e-166
Identity = 352/536 (65.67%), Postives = 386/536 (72.01%), Query Frame = 1
Query:    4 AVASGFRTFLFQQVRLLVFAAGPRLPPRSVSQLVQVVHQLLAAVKDSLEGYLQLLLPFLLRMVERRHVALKVRHVTLVVRDLFDAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRRARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRSSGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKLWSDFGKPVLSRPSSGRQWSAE-LLGVGGLAVAGXXXXXXXXXXXXXXXXXXXXXXXXSRPARPVGAA----VXXXXXXXXXXXXXXXDESTIPFDPLHVHLGSFNSDEAFAE---GGAGAASLXXXXXXXXXXXXXXXXXXXXXVSTTDVVVEWYEVMLGRLRCLDALGEHRKVLDSSMALCKNLQEDLARVEFGREPTGGFAEVAAALEPPRVAKRSPLASLVS 1587
            AVA GFRTFLF+QV +L++AAGPRLPP +VS+LVQ+VHQ      DSLEGYLQLLLP LLRM+ERR V L +RH+TL VR LF+AMDTTGCTKRGDWTEWMRVVSVELLRQSPSR LRPCAALAEA+QPVAQDLFNAAFLTVWDELFME WEGDN+H+PVIEAIQSALSSPSLPPEIQTQLLNLA       L+ +SVTS+M+SDFGFA GG+GWG AWEG  A    GGGE           XXXXXXXXXXX  C  SGP+PDTLEALISVNHKLGLDMAAAGILRQAEQQ+E G+C  VVRPSWLEKLW      V+SRP++GRQ S + LLG        XXXXXXXXXXXXXXXXXXXX       +R   A     V    X          DE T  FDP  + LGSFNSDEAFAE    GA A+S XXXXXXXXX            +STTDVVVEWY+VMLGRLRCLDALGEHRK             ED ARV  GREP GGF+ VAA    PR  K  P  +L +
Sbjct:    2 AVAGGFRTFLFRQVIVLIYAAGPRLPPWAVSRLVQIVHQ------DSLEGYLQLLLPVLLRMIERRDVGLAMRHITLAVRALFEAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRVLRPCAALAEAHQPVAQDLFNAAFLTVWDELFMENWEGDNTHSPVIEAIQSALSSPSLPPEIQTQLLNLAGFME---LQDKSVTSVMESDFGFAAGGVGWGAAWEGVPAAVPPGGGESVAGSESGAGGXXXXXXXXXXX--CSGSGPNPDTLEALISVNHKLGLDMAAAGILRQAEQQAEAGLCEFVVRPSWLEKLWRPT---VMSRPAAGRQGSGDSLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPSPAVSRSSSAGLIPGVGPAAXAAVKGGAAGGDEHTPAFDPDRMLLGSFNSDEAFAEVGPAGAPASSXXXXXXXXXXGAGAWSGGFDGGLSTTDVVVEWYQVMLGRLRCLDALGEHRK-------------EDWARVGVGREPAGGFSTVAAGARGPRAPKMLPPPALAT 510          
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: A0A6H5K683_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K683_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 3.130e-104
Identity = 194/241 (80.50%), Postives = 204/241 (84.65%), Query Frame = 1
Query:  241 RDLFDAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLA--------DGRRRARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRSSGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKLW 939
            R LF+AMDTTGCTKRGDWTEWMRVVSVELLRQSPSR LRPCAALAEA+QPVAQDLFNAAFLTVWDELF+E WEGDN+H+PVIEAIQSALSSPSLPPEIQTQLLNLA        DGRRR R+RTESVTS M+SDFGFA GG+GWG AWEG  AV   GGGE       XXXXXXXXXXXXXXX      GP PDTLEALISVNHKLGLDMAAAGILRQAEQQ+E G+C  VVRPSWLEKLW
Sbjct:  492 RALFEAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRVLRPCAALAEAHQPVAQDLFNAAFLTVWDELFVENWEGDNAHSPVIEAIQSALSSPSLPPEIQTQLLNLAGFMELQDKDGRRRTRMRTESVTSAMESDFGFAAGGVGWGAAWEGVPAVVPQGGGESVAESESXXXXXXXXXXXXXXXXX----GPDPDTLEALISVNHKLGLDMAAAGILRQAEQQAEAGLCEFVVRPSWLEKLW 728          
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: A0A0D2UH62_CAPO3 (DNA-directed RNA polymerase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UH62_CAPO3)

HSP 1 Score: 116 bits (290), Expect = 3.260e-23
Identity = 83/232 (35.78%), Postives = 118/232 (50.86%), Query Frame = 1
Query:  241 RDLFDAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRRARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRSSGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKL 936
            ++L    + T  + + DWTEW+R  SVELL++SPS ALR C+AL++ Y P+A++LFNAAF++ W EL+ +Y E       +++A+++AL SP +PPEIQ  LLNLA+         E     +  DF   G         E AS   A                                S P+P T+EALI++N+ L    AAAGIL  A+Q  +     + V  SW EKL
Sbjct: 2592 KNLKKMWEVTQKSTKEDWTEWIRRFSVELLKESPSPALRSCSALSQIYTPLARELFNAAFVSCWTELYEQYQE------ELVQALETALLSPHIPPEIQQTLLNLAEFM-------EHDDKTLPIDFKTLG---------EYASKCHA-------------------YAKALHYKEIEFYSAPNPQTIEALITINNLLQKPEAAAGILVYAQQNPD---IEITVHESWYEKL 2779          
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: G7DS05_MIXOS (Serine/threonine-protein kinase TOR n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7DS05_MIXOS)

HSP 1 Score: 114 bits (286), Expect = 9.330e-23
Identity = 78/237 (32.91%), Postives = 115/237 (48.52%), Query Frame = 1
Query:  241 RDLFDAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRRARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRSSGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKL--WSD 945
            ++L  A +T    K  DW EW++ +SV+LL+ SPS +LR CA LAE YQP+A+DLFNA+F++ W EL+ +Y +       ++ AI+SALSSP++PPEI   LLNLA+         + V  I     G                                                +C +  P P+T+EALI +N++L     A GIL  A++Q +     + ++  W EKL  W D
Sbjct: 1125 QNLKSAWETVDRAKPDDWREWLKRLSVQLLKSSPSHSLRACANLAEVYQPLARDLFNASFVSCWTELYDQYQD------ELVRAIESALSSPTVPPEIMQTLLNLAEFMEH----DDKVLPISIRALG------------------------------SYATKCHAYAKALHYKELECMTE-PMPETIEALIRINNQLQQPDVAVGILTHAQRQYD-----IALKEDWYEKLERWED 1315          
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: A0A0W4ZU42_PNEJ7 (Serine/threonine-protein kinase TOR n=3 Tax=Pneumocystis TaxID=4753 RepID=A0A0W4ZU42_PNEJ7)

HSP 1 Score: 110 bits (276), Expect = 1.580e-21
Identity = 82/235 (34.89%), Postives = 118/235 (50.21%), Query Frame = 1
Query:  247 LFDAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRRARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRSSGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKL--WSD 945
            L +A +T+  + + DW EW+R +SVELL++SPS ALR CA+LA  Y P+A++LFNAAFL+ W EL+ +Y +       ++ +I+ AL+SP++PPEI   LLNLA+      +  +  T  +D                 GA A       +                           S PS DT+EALIS+N+ L    AA GIL  A+Q   E      ++ +W EKL  W D
Sbjct: 1122 LKNAWETSQKSTKDDWQEWIRRLSVELLKESPSHALRACASLAGVYYPLARELFNAAFLSCWTELYEQYQD------ELVRSIEIALTSPNIPPEILQSLLNLAEF-----MEHDDKTLPIDIRT-------------LGAYAAKCHAFAKALHYKELEFI-----------------SEPSTDTIEALISINNHLQQPDAAIGILSYAQQHGLE------LKETWYEKLERWED 1309          
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: A0A0E9NCA5_SAICN (Serine/threonine-protein kinase TOR n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NCA5_SAICN)

HSP 1 Score: 110 bits (275), Expect = 2.140e-21
Identity = 82/248 (33.06%), Postives = 117/248 (47.18%), Query Frame = 1
Query:  247 LFDAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRRARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRS-------------SGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKL--WSD 945
            L  A + +  + R DW EW+R +SVELL++SPS ALR CA LA  Y P+A++LFNAAF++ W EL+ +Y +       ++ AI++AL SP++PPEI   LLNLA+               M+ D                  A+P                            +KC +             S PS DT+EALIS+N++L    AA GIL  A+   +     L ++ +W EKL  W D
Sbjct: 1319 LKSAWEASQRSTRDDWQEWIRRLSVELLKESPSHALRACAGLAGVYYPLARELFNAAFVSCWTELYDQYQD------ELVRAIETALISPNIPPEILQTLLNLAE--------------FMEHDD----------------KALPI------------------DIRTLGLYASKCHAFAKALHYKELEFISEPSTDTIEALISINNQLQQPDAAIGILSHAQHHHD-----LELKETWYEKLQRWED 1507          
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: U4L8V8_PYROM (Serine/threonine-protein kinase TOR n=2 Tax=Pyronemataceae TaxID=110846 RepID=U4L8V8_PYROM)

HSP 1 Score: 110 bits (274), Expect = 2.790e-21
Identity = 85/260 (32.69%), Postives = 122/260 (46.92%), Query Frame = 1
Query:  256 AMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRRARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRSSG-------------PSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKL--WSD----FGKPVLSRPSS 978
            A + +  + + DW EW+R  SVELL+QSPS ALR CA LA AY P+A+DLFNAAF++ W EL+ ++ E       ++ +I++AL SP++PPEI   LLNLA+               M+ D                  A+P                             KC +               P P+T+EALIS+N+ L    AA GILR+A+  S+     + +R SW EKL  W +    + +  L+ P S
Sbjct: 1128 AWEASQRSTKEDWQEWIRRFSVELLKQSPSHALRACAGLAGAYYPLARDLFNAAFVSCWTELYEQFQE------ELVRSIETALISPNIPPEILQILLNLAE--------------FMEHDD----------------KALPI------------------DIRTLGVYAAKCHAYAKALHYKELEFLQEPQPNTIEALISINNLLQQSDAAIGILRRAQVYSD-----VPLRESWFEKLQRWEEALKAYQEKELTEPDS 1328          
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: A0A1Y2F9P3_PROLT (Non-specific serine/threonine protein kinase n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2F9P3_PROLT)

HSP 1 Score: 109 bits (273), Expect = 3.700e-21
Identity = 81/248 (32.66%), Postives = 118/248 (47.58%), Query Frame = 1
Query:  247 LFDAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRRARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRS-------------SGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKL--WSD 945
            L +A + +  + R DW EW+R +SVELL +SPS ALR CA LA  Y P+A++LFNAAF++ W EL+ +Y +       ++ AI++AL+SP++PPEI   LLNLA+               M+ D                  A+P                             KC +             S PS +T+E+LIS+N++L    AA GIL  A+Q  +     L ++ +W EKL  W D
Sbjct: 1116 LKNAWEASQRSTRDDWQEWIRRLSVELLNESPSHALRACAGLAGLYYPLARELFNAAFVSCWTELYEQYQD------ELVRAIETALTSPNIPPEILQALLNLAE--------------FMEHDD----------------KALPI------------------DIRTLGSYAAKCHAFAKALHYKELEFISEPSAETIESLISINNQLQQPDAAIGILTNAQQHDD-----LELKETWYEKLQRWED 1304          
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: B6K105_SCHJY (Serine/threonine-protein kinase TOR n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K105_SCHJY)

HSP 1 Score: 109 bits (272), Expect = 4.900e-21
Identity = 79/241 (32.78%), Postives = 120/241 (49.79%), Query Frame = 1
Query:  247 LFDAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRR------ARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRSSGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKL--WSD 945
            L +A + +  + + DW EW+R +SVELL++SPS ALR CAALA  YQP+A+ LFNA+F++ W EL+      D+    ++++I+ AL+SP +PPEI   LLNLA+            +RT    +     F               A A+                              +   + PSPDT+EALIS+N++L    AA GIL+ A++  +     + ++ +W EKL  W D
Sbjct: 1116 LRNAWEASQRSTKDDWHEWIRRLSVELLKESPSHALRACAALASTYQPLARVLFNASFVSCWSELY------DHFQEELVKSIEIALTSPHIPPEILQILLNLAEFMEHDDKPLPIDIRTLGAYAAKCHAF---------------AKAL---------------------HYKELEFIEEELVTKPSPDTVEALISINNQLQQPDAAIGILKHAQRHDQ-----INLKEAWYEKLQRWDD 1309          
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Match: A0A507CFK0_9FUNG (Non-specific serine/threonine protein kinase n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CFK0_9FUNG)

HSP 1 Score: 108 bits (270), Expect = 8.580e-21
Identity = 80/266 (30.08%), Postives = 124/266 (46.62%), Query Frame = 1
Query:  193 ERRHVALKVRHVTLVVRDLFDAMDTTGCTKRGDWTEWMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFMEYWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRRARLRTESVTSIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEXXXXXXXXXXXXXXXXXXXXXXNKCRS-------------SGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVCRLVVRPSWLEKL--WSD 945
            E  H     + + +  ++L  A + +  + R DW EW+R  SVELL++SPS ALR CA+LA +Y P+A++LFNA F++ W EL+ ++ +       ++ ++++AL+SP++PPEI   LLNLA+               M+ D                  A+P                             KC +             S PSP T+E LIS+N++L    +A GIL  A+Q  E     + ++ SW EKL  W D
Sbjct: 1095 EETHAETGAKKLPVNQQNLKKAWEASQRSTRDDWAEWIRRFSVELLKESPSHALRACASLAASYPPLARELFNAGFVSCWSELYDQFQD------ELVRSLETALTSPNIPPEILQTLLNLAE--------------FMEHDD----------------KALPI------------------DIRTLGKYAAKCHAFAKALHYKELEFISEPSPGTIENLISINNQLQQPDSAVGILTYAQQNHE-----VELKESWYEKLQRWED 1301          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11146.1031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYJ6_ECTSI3.000e-16665.67Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6H5K683_9PHAE3.130e-10480.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0D2UH62_CAPO33.260e-2335.78DNA-directed RNA polymerase n=2 Tax=Capsaspora owc... [more]
G7DS05_MIXOS9.330e-2332.91Serine/threonine-protein kinase TOR n=1 Tax=Mixia ... [more]
A0A0W4ZU42_PNEJ71.580e-2134.89Serine/threonine-protein kinase TOR n=3 Tax=Pneumo... [more]
A0A0E9NCA5_SAICN2.140e-2133.06Serine/threonine-protein kinase TOR n=2 Tax=Saitoe... [more]
U4L8V8_PYROM2.790e-2132.69Serine/threonine-protein kinase TOR n=2 Tax=Pyrone... [more]
A0A1Y2F9P3_PROLT3.700e-2132.66Non-specific serine/threonine protein kinase n=1 T... [more]
B6K105_SCHJY4.900e-2132.78Serine/threonine-protein kinase TOR n=1 Tax=Schizo... [more]
A0A507CFK0_9FUNG8.580e-2130.08Non-specific serine/threonine protein kinase n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11146contigL-elsbetiae_contig11146:1380..4340 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score527.3
Seed ortholog evalue8.8e-147
Seed eggNOG ortholog2880.D7FYJ6
Preferred nameTOR1
KEGG koko:K07203
KEGG Pathwayko01521,ko01522,ko04012,ko04066,ko04072,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04012,map04066,map04072,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0891@2759
Ec32 ortholog descriptionTarget of rapamycin 2
Ec32 orthologEc-23_002960.1
EC2.7.11.1
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Exons5
Model size1728
Cds size1728
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11146.1031.1prot_L-elsbetiae_contig11146.1031.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11146 1380..4340 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815328.6398501-CDS-L-elsbetiae_contig11146:1379..21661622815328.6398501-CDS-L-elsbetiae_contig11146:1379..2166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 1380..2166 -
1691682841.8260756-CDS-L-elsbetiae_contig11146:1379..21661691682841.8260756-CDS-L-elsbetiae_contig11146:1379..2166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 1380..2166 -
1622815328.6517253-CDS-L-elsbetiae_contig11146:2325..27081622815328.6517253-CDS-L-elsbetiae_contig11146:2325..2708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 2326..2708 -
1691682841.8384428-CDS-L-elsbetiae_contig11146:2325..27081691682841.8384428-CDS-L-elsbetiae_contig11146:2325..2708Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 2326..2708 -
1622815328.668247-CDS-L-elsbetiae_contig11146:2987..33051622815328.668247-CDS-L-elsbetiae_contig11146:2987..3305Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 2988..3305 -
1691682841.8477983-CDS-L-elsbetiae_contig11146:2987..33051691682841.8477983-CDS-L-elsbetiae_contig11146:2987..3305Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 2988..3305 -
1622815328.6785848-CDS-L-elsbetiae_contig11146:3917..40381622815328.6785848-CDS-L-elsbetiae_contig11146:3917..4038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 3918..4038 -
1691682841.857267-CDS-L-elsbetiae_contig11146:3917..40381691682841.857267-CDS-L-elsbetiae_contig11146:3917..4038Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 3918..4038 -
1622815328.6917827-CDS-L-elsbetiae_contig11146:4221..43401622815328.6917827-CDS-L-elsbetiae_contig11146:4221..4340Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 4222..4340 -
1691682841.8727477-CDS-L-elsbetiae_contig11146:4221..43401691682841.8727477-CDS-L-elsbetiae_contig11146:4221..4340Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11146 4222..4340 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11146.1031.1

>prot_L-elsbetiae_contig11146.1031.1 ID=prot_L-elsbetiae_contig11146.1031.1|Name=mRNA_L-elsbetiae_contig11146.1031.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=576bp
VAVASGFRTFLFQQVRLLVFAAGPRLPPRSVSQLVQVVHQLLAAVKDSLE
GYLQLLLPFLLRMVERRHVALKVRHVTLVVRDLFDAMDTTGCTKRGDWTE
WMRVVSVELLRQSPSRALRPCAALAEAYQPVAQDLFNAAFLTVWDELFME
YWEGDNSHAPVIEAIQSALSSPSLPPEIQTQLLNLADGRRRARLRTESVT
SIMDSDFGFAGGGIGWGGAWEGASAVPAAGGGEAGAAQSVAGSESAAGSS
SGGGGNKCRSSGPSPDTLEALISVNHKLGLDMAAAGILRQAEQQSEEGVC
RLVVRPSWLEKLWSDFGKPVLSRPSSGRQWSAELLGVGGLAVAGGAGGGE
QQPPPPPPPPAQATVSSASRPARPVGAAVAVTATVRAAGGGGGGDESTIP
FDPLHVHLGSFNSDEAFAEGGAGAASLTAAGGGGGGGSASCGGGGEGGVS
TTDVVVEWYEVMLGRLRCLDALGEHRKVLDSSMALCKNLQEDLARVEFGR
EPTGGFAEVAAALEPPRVAKRSPLASLVSVSRPTTPKIMPPPAAAVSVAA
TGAAAAAVAAASAAAAVSSAPASAVP
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mRNA from alignment at L-elsbetiae_contig11146:1380..4340-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11146.1031.1 ID=mRNA_L-elsbetiae_contig11146.1031.1|Name=mRNA_L-elsbetiae_contig11146.1031.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2961bp|location=Sequence derived from alignment at L-elsbetiae_contig11146:1380..4340- (Laminarionema elsbetiae ELsaHSoW15)
GTAGCGGTCGCCAGCGGATTCCGCACCTTCCTGTTCCAGCAGGTTAGGCT GCTGGTCTTCGCCGCGGGTCCTCGGCTGCCTCCGCGGTCTGTGTCCCAGC TGGTCCAAGTCGTCCACCAGTCCTGGGAAGGGCACCAAGGGCAGTGCATT CAGGTTGTCCGGGCCCTCCACGGAGCGCTAGGGGCGCGGGGCTTCCGGCT CCTCCTCCCGGACCTGCTGCCGCTGCTCCTCGGCACCCTGAAGGCTGAGA GGGACAACGTGCCGGCGGGGGGAGAGAGGCCCGGCAGCCTTGCGGTGATG AGGCTGCTGGCGGCGGTCAAGGACAGCCTGGAGGGCTACCTCCAGCTGCT GCTGCCGTTCCTGCTGAGAATGGTCGAGCGCAGGCACGTGGCGCTGAAGG TGCGCCACGTCACGCTGGTGGTGGTGTTGCAGCTCACCAACGACACTCGG TACCTCTTCGACAACGCGTCCCGTATCGTGCACGCCTTTGTCCGGCTCGT GGCCTCGGAGAGCGCGGCGCCTGCCGGCTCGACGTCCTCCGCGAGCGACT CGGCCGCCACCGCGTCGGGCAGAAGAACATCTTCCGGCGGCGGCGACGGC GGCGGCGGCGGTGGCGGCTTGCCAGAAGGCTGCAGGTTTAGCGCCGAGGT CGAGACCCCCAGAGAGCTGGCGAGGATGGGCGTGCTCGCGCTGTGCTGCA TGGTGCACCGGCTGAAGATGCGCTACATCCCGTTCGTGGCCCCGGCTCAT GACCAGGTGGCGGCCTTCAAGGGGTCCGAGGCGTACGAGTACTACCGGAC CCTGGTGTCGCGCCTGATCAAGAGGGGCGGCACCGGGTCGCTGCCGGAGC CCGTGGTTCCTGCGGTGGAAGAGCTGCTCGGGGACGTGGAGGTAGAGGTC GACTTCGACGCGTCGTGCTCCCTCCACCACCACCGGGGCGGGAGCATGGA CGGCCTGCGGTTTTCCATGGGCCAGGAGGGGATAGTCGGCGTCGGCGGGG CCGGGGAGGACGACGACCGCCTCGTCGTCAACCAGCGCGACCTGTTCGAC GCCATGGACACCACCGGGTGCACCAAGAGGGGGGACTGGACCGAGTGGAT GCGCGTGGTGTCCGTGGAGCTCCTGCGACAGTCCCCGTCGCGAGCCCTGC GGCCGTGCGCCGCCCTCGCCGAGGCGTACCAGCCCGTGGCGCAGGACCTG TTCAACGCGGCCTTCCTAACCGTGTGGGACGAGCTCTTCATGGAGTACTG GGAGGGGGACAACAGCCACGCCCCCGTGATCGAGGCCATCCAGTCCGCGC TGAGCTCCCCGTCCTTGCCGCCTGAGATCCAGACGCAGCTCCTCAACCTC GCCGTGTTCATGGAGCTCCAGGACAAGGCGCTGCCCCTCGAGACCAGCTT CCTGGCGGCAAAGGCGCTGTCCTCCCACGCCCTGGCCAAGTTCCTCCACT ACACGGAGATGAAGTTCCTGAGAGACTCGCAGCAGGAGGACTACTCCATG AGCGGCGCCGGCGGGAGCCGGTCGGACTTTCACAGCCCGAGGCACGGCGG CGTACCGGGGCTCCGTGGAGGAGGAGGGGGGGGGGGAGGCGTTGGGGCCT ACGGGGTTGTCGGGGGCGGGGCGAACCAGCAGGATGGGCGGCGGCGCGCA CGCCTGCGCACGGAATCGGTGACGTCCATCATGGACTCAGATTTTGGGTT CGCGGGGGGGGGAATCGGGTGGGGAGGCGCGTGGGAAGGCGCTTCCGCGG TACCGGCGGCCGGGGGCGGGGAGGCGGGGGCGGCTCAGAGCGTGGCCGGC TCGGAGTCCGCCGCCGGGAGCAGCAGCGGTGGCGGCGGCAATAAGTGTCG CAGCAGCGGCCCAAGCCCCGACACGCTGGAGGCGTTGATTTCTGTCAACC ACAAGCTGGGCCTGGACATGGCGGCGGCAGGGATACTGAGGCAAGCTGAA CAGCAGTCCGAGGAGGGCGTGTGCCGGCTCGTCGTCCGCCCGTCCTGGCT GGAGAAGCTGTGGAGGTGGAACGACGCCCTTGCGATGTACGAGTCGGCGA TCGAGGACTGCCACTCTCTGCTGAAGGCCGGCGGCTACGCCGCTGCCGCC ACGGCGCAGCACCACCACCACCACCAGCTGAGCCCCTGTGTCCCGCTCGT CATCAGCGCCGGCGGCGGGCTCAGCGACTTCGGCAAGCCGGTGCTATCGC GGCCGTCATCTGGGAGGCAGTGGTCCGCCGAGCTGCTGGGCGTGGGAGGA CTGGCGGTGGCGGGGGGGGCGGGAGGAGGGGAGCAGCAGCCGCCGCCGCC GCCGCCGCCGCCGGCACAGGCAACGGTTTCATCGGCTTCGCGACCTGCCA GGCCTGTAGGAGCGGCGGTGGCGGTGACGGCAACGGTGAGGGCCGCGGGC GGCGGTGGCGGCGGCGACGAGTCCACGATACCTTTCGACCCGTTACACGT CCATCTCGGCAGTTTCAACAGCGACGAGGCCTTCGCGGAAGGCGGTGCCG GCGCGGCTTCCTTGACTGCCGCGGGTGGCGGAGGCGGAGGGGGGTCGGCG TCTTGTGGCGGTGGTGGCGAGGGTGGCGTGTCGACGACCGATGTGGTTGT GGAGTGGTATGAGGTCATGCTCGGGAGGCTGAGGTGCCTGGATGCACTGG GAGAGCATCGAAAGGTGTTAGACAGCTCTATGGCGCTCTGTAAAAACCTG CAAGAGGACCTGGCGAGGGTGGAGTTCGGCCGGGAGCCGACTGGAGGCTT CGCCGAGGTGGCGGCTGCCTTGGAGCCTCCTAGGGTCGCGAAAAGATCAC CGCTGGCGTCACTGGTCTCTGTCTCCCGCCCGACAACGCCGAAGATTATG CCGCCTCCCGCGGCCGCGGTGTCCGTAGCAGCAACAGGAGCGGCGGCGGC GGCGGTGGCGGCGGCCTCAGCGGCGGCAGCGGTGTCGTCCGCACCGGCCT CGGCTGTACCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11146:1380..4340-

>mRNA_L-elsbetiae_contig11146.1031.1 ID=mRNA_L-elsbetiae_contig11146.1031.1|Name=mRNA_L-elsbetiae_contig11146.1031.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3456bp|location=Sequence derived from alignment at L-elsbetiae_contig11146:1380..4340- (Laminarionema elsbetiae ELsaHSoW15)
GTAGCGGTCGCCAGCGGATTCCGCACCTTCCTGTTCCAGCAGGTTAGGCT
GCTGGTCTTCGCCGCGGGTCCTCGGCTGCCTCCGCGGTCTGTGTCCCAGC
TGGTCCAAGTCGTCCACCAGTAGCGGTCGCCAGCGGATTCCGCACCTTCC
TGTTCCAGCAGGTTAGGCTGCTGGTCTTCGCCGCGGGTCCTCGGCTGCCT
CCGCGGTCTGTGTCCCAGCTGGTCCAAGTCGTCCACCAGCTGCTGGCGGC
GGTCAAGGACAGCCTGGAGGGCTACCTCCAGCTGCTGCTGCCGTTCCTGC
TGAGAATGGTCGAGCGCAGGCACGTGGCGCTGAAGGTGCGCCACGTCACG
CTGGTGGTGGCTGCTGGCGGCGGTCAAGGACAGCCTGGAGGGCTACCTCC
AGCTGCTGCTGCCGTTCCTGCTGAGAATGGTCGAGCGCAGGCACGTGGCG
CTGAAGGTGCGCCACGTCACGCTGGTGGTGCGCGACCTGTTCGACGCCAT
GGACACCACCGGGTGCACCAAGAGGGGGGACTGGACCGAGTGGATGCGCG
TGGTGTCCGTGGAGCTCCTGCGACAGTCCCCGTCGCGAGCCCTGCGGCCG
TGCGCCGCCCTCGCCGAGGCGTACCAGCCCGTGGCGCAGGACCTGTTCAA
CGCGGCCTTCCTAACCGTGTGGGACGAGCTCTTCATGGAGTACTGGGAGG
GGGACAACAGCCACGCCCCCGTGATCGAGGCCATCCAGTCCGCGCTGAGC
TCCCCGTCCTTGCCGCCTGAGATCCAGACGCAGCTCCTCAACCTCGCCCG
CGACCTGTTCGACGCCATGGACACCACCGGGTGCACCAAGAGGGGGGACT
GGACCGAGTGGATGCGCGTGGTGTCCGTGGAGCTCCTGCGACAGTCCCCG
TCGCGAGCCCTGCGGCCGTGCGCCGCCCTCGCCGAGGCGTACCAGCCCGT
GGCGCAGGACCTGTTCAACGCGGCCTTCCTAACCGTGTGGGACGAGCTCT
TCATGGAGTACTGGGAGGGGGACAACAGCCACGCCCCCGTGATCGAGGCC
ATCCAGTCCGCGCTGAGCTCCCCGTCCTTGCCGCCTGAGATCCAGACGCA
GCTCCTCAACCTCGCCGATGGGCGGCGGCGCGCACGCCTGCGCACGGAAT
CGGTGACGTCCATCATGGACTCAGATTTTGGGTTCGCGGGGGGGGGAATC
GGGTGGGGAGGCGCGTGGGAAGGCGCTTCCGCGGTACCGGCGGCCGGGGG
CGGGGAGGCGGGGGCGGCTCAGAGCGTGGCCGGCTCGGAGTCCGCCGCCG
GGAGCAGCAGCGGTGGCGGCGGCAATAAGTGTCGCAGCAGCGGCCCAAGC
CCCGACACGCTGGAGGCGTTGATTTCTGTCAACCACAAGCTGGGCCTGGA
CATGGCGGCGGCAGGGATACTGAGGCAAGCTGAACAGCAGTCCGAGGAGG
GCGTGTGCCGGCTCGTCGTCCGCCCGTCCTGGCTGGAGAAGCTGTGGAGG
ATGGGCGGCGGCGCGCACGCCTGCGCACGGAATCGGTGACGTCCATCATG
GACTCAGATTTTGGGTTCGCGGGGGGGGGAATCGGGTGGGGAGGCGCGTG
GGAAGGCGCTTCCGCGGTACCGGCGGCCGGGGGCGGGGAGGCGGGGGCGG
CTCAGAGCGTGGCCGGCTCGGAGTCCGCCGCCGGGAGCAGCAGCGGTGGC
GGCGGCAATAAGTGTCGCAGCAGCGGCCCAAGCCCCGACACGCTGGAGGC
GTTGATTTCTGTCAACCACAAGCTGGGCCTGGACATGGCGGCGGCAGGGA
TACTGAGGCAAGCTGAACAGCAGTCCGAGGAGGGCGTGTGCCGGCTCGTC
GTCCGCCCGTCCTGGCTGGAGAAGCTGTGGAGCGACTTCGGCAAGCCGGT
GCTATCGCGGCCGTCATCTGGGAGGCAGTGGTCCGCCGAGCTGCTGGGCG
TGGGAGGACTGGCGGTGGCGGGGGGGGCGGGAGGAGGGGAGCAGCAGCCG
CCGCCGCCGCCGCCGCCGCCGGCACAGGCAACGGTTTCATCGGCTTCGCG
ACCTGCCAGGCCTGTAGGAGCGGCGGTGGCGGTGACGGCAACGGTGAGGG
CCGCGGGCGGCGGTGGCGGCGGCGACGAGTCCACGATACCTTTCGACCCG
TTACACGTCCATCTCGGCAGTTTCAACAGCGACGAGGCCTTCGCGGAAGG
CGGTGCCGGCGCGGCTTCCTTGACTGCCGCGGGTGGCGGAGGCGGAGGGG
GGTCGGCGTCTTGTGGCGGTGGTGGCGAGGGTGGCGTGTCGACGACCGAT
GTGGTTGTGGAGTGGTATGAGGTCATGCTCGGGAGGCTGAGGTGCCTGGA
TGCACTGGGAGAGCATCGAAAGGTGTTAGACAGCTCTATGGCGCTCTGTA
AAAACCTGCAAGAGGACCTGGCGAGGGTGGAGTTCGGCCGGGAGCCGACT
GGAGGCTTCGCCGAGGTGGCGGCTGCCTTGGAGCCTCCTAGGGTCGCGAA
AAGATCACCGCTGGCGTCACTGGTCTCTGTCTCCCGCCCGACAACGCCGA
AGATTATGCCGCCTCCCGCGGCCGCGGTGTCCGTAGCAGCAACAGGAGCG
GCGGCGGCGGCGGTGGCGGCGGCCTCAGCGGCGGCAGCGGTGTCGTCCGC
ACCGGCCTCGGCTGTACCGCGACTTCGGCAAGCCGGTGCTATCGCGGCCG
TCATCTGGGAGGCAGTGGTCCGCCGAGCTGCTGGGCGTGGGAGGACTGGC
GGTGGCGGGGGGGGCGGGAGGAGGGGAGCAGCAGCCGCCGCCGCCGCCGC
CGCCGCCGGCACAGGCAACGGTTTCATCGGCTTCGCGACCTGCCAGGCCT
GTAGGAGCGGCGGTGGCGGTGACGGCAACGGTGAGGGCCGCGGGCGGCGG
TGGCGGCGGCGACGAGTCCACGATACCTTTCGACCCGTTACACGTCCATC
TCGGCAGTTTCAACAGCGACGAGGCCTTCGCGGAAGGCGGTGCCGGCGCG
GCTTCCTTGACTGCCGCGGGTGGCGGAGGCGGAGGGGGGTCGGCGTCTTG
TGGCGGTGGTGGCGAGGGTGGCGTGTCGACGACCGATGTGGTTGTGGAGT
GGTATGAGGTCATGCTCGGGAGGCTGAGGTGCCTGGATGCACTGGGAGAG
CATCGAAAGGTGTTAGACAGCTCTATGGCGCTCTGTAAAAACCTGCAAGA
GGACCTGGCGAGGGTGGAGTTCGGCCGGGAGCCGACTGGAGGCTTCGCCG
AGGTGGCGGCTGCCTTGGAGCCTCCTAGGGTCGCGAAAAGATCACCGCTG
GCGTCACTGGTCTCTGTCTCCCGCCCGACAACGCCGAAGATTATGCCGCC
TCCCGCGGCCGCGGTGTCCGTAGCAGCAACAGGAGCGGCGGCGGCGGCGG
TGGCGGCGGCCTCAGCGGCGGCAGCGGTGTCGTCCGCACCGGCCTCGGCT
GTACCG
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