mRNA_L-elsbetiae_contig1114.1027.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: D7G8G9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8G9_ECTSI) HSP 1 Score: 295 bits (755), Expect = 2.870e-94 Identity = 172/290 (59.31%), Postives = 198/290 (68.28%), Query Frame = 1 Query: 4 SVVTVLACVAIPVICAYQYRV--TGPRRQLPRDTAQDIHLRRRAQHAASGMGICLGYKWAIPDARTVLILLSFSCASFLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIHGKQPGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPSGKSLAGSLAAFVVCAMSTLLLFGSCCLLP-DEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMS--GSDSRRR-LLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVSGGMFMFLALAGAS 855 SV VL CV +PV+ Y R T P TAQ +H RRR QHA G+ + GYKW I DARTV+ +LS +CASFL L +LRRR K VD LY+ L+GPLLRP EI G+ PG FWF++G+ AVA+F +DVALQSILHLS+GDPVASVVGIK G+ NR+LP GKSLAGSLAAF+ C++STLLLFG CC P DEG D H DS SS + G FSAC + G DS L LW+ALLGGVSGAVGE LPLGVDDNLSMPIVSG FLAL S Sbjct: 9 SVAAVLVCVGLPVLFGYHNRQVETAP-------TAQSVHWRRRLQHATCGVAVTCGYKWVIRDARTVVAILSIACASFLALHRLRRRLKSVDKLYILLLGPLLRPQEIRGQLPGGFWFVVGSTAAVALFSKDVALQSILHLSLGDPVASVVGIKKGEGNRILPGGKSLAGSLAAFLACSLSTLLLFGCCCRPPGDEGRDSDHVG------DSDLLSS--LIFGHFSACTAVGRGGRDSGGSGTPLLLWFALLGGVSGAVGELLPLGVDDNLSMPIVSG--LTFLALRKCS 281
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: A0A485LBM6_9STRA (Aste57867_18956 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBM6_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.460e-39 Identity = 92/241 (38.17%), Postives = 132/241 (54.77%), Query Frame = 1 Query: 97 TAQDIHLRRRAQHAASGMGICLGYKWAIPDARTVLILLSFSCASFLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIHGKQPGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPSGKSLAGSLAAFVVCAMSTLLLFGSCCLLPDEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMSGSDSRRRLLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVSG 819 T Q +H+RR+ QHA SG+ + G +A + V+I+L S +F ++ LR++ KVV+ YL + GP+LR EI + PGAFWFLLG+A ++A F +DVA SILHLS+GDP AS GI LG + L +GK++AG + FVVC ++++ L D + HG L + +L G++G +GE L LGVDDNLS+P+VSG Sbjct: 62 TTQQLHIRRKVQHAGSGLLVVAGTFYA--SSVQVVIVLGCSAVAFYIITYLRKQYKVVNTTYLHVFGPILRQHEIAHRLPGAFWFLLGSALSLAFFSKDVAQLSILHLSLGDPCASFFGITLGHHSHKLANGKTIAGVVGCFVVCLLTSIAFLA----LVD--GPVAHGTT----------------------------------LATKGLVMVLAGLAGTLGEALSLGVDDNLSLPLVSG 260
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: A0A6G0XP90_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP90_9STRA) HSP 1 Score: 152 bits (383), Expect = 7.400e-39 Identity = 92/241 (38.17%), Postives = 130/241 (53.94%), Query Frame = 1 Query: 97 TAQDIHLRRRAQHAASGMGICLGYKWAIPDARTVLILLSFSCASFLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIHGKQPGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPSGKSLAGSLAAFVVCAMSTLLLFGSCCLLPDEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMSGSDSRRRLLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVSG 819 T + +H+RR+ QHA SG+ + L + + V ++L S A F V+ QLR++SKVV+ YL + GP+LR EI + PGAFWFLLG AG++ +FP++VA SILHLS+GDP AS GI LG + +P+GK+LAG + FVVC + + GF + + S + LL + + +G +GE L LG DDNLS+PIVSG Sbjct: 95 TTKQLHIRRKVQHAGSGLLVVLASFYG--SSVQVAVVLICSAAVFYVVTQLRKQSKVVNQTYLHVFGPILRQHEIAYRLPGAFWFLLGCAGSMLLFPKEVAQLSILHLSLGDPCASFFGITLGQNSPKMPNGKTLAGVIGCFVVCLLCNI---------------------------------------GFLSIVDTS--IAHLGLLEKALVVVSCAFAGTLGEALYLGCDDNLSLPIVSG 292
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: A0A024US71_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US71_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.600e-38 Identity = 89/243 (36.63%), Postives = 135/243 (55.56%), Query Frame = 1 Query: 97 TAQDIHLRRRAQHAASGMGICLGYKWAIPDARTVLILLSFSCASFLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIHGKQPGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPSGKSLAGSLAAFVVCAMSTLLLFGSCCLLPDEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMSGSDSRRRLLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVSGGM 825 T Q++H+RR+ QHA SG+ + +G +A + V I+L+ S A+F ++ QLR++ KVV+ YLR+ GP+LR EI + PGAFWFLLG G++ +FP+DVA S+LHLS+GDP AS+ G+ G L +GK++AG + VC ++++ L + ++H L G M+ L G +G +GE L +G DDNLS+P+VSGG+ Sbjct: 65 TTQELHIRRKIQHAGSGVLVVVGSFFA--SSLQVSIVLACSAAAFYIVAQLRQQYKVVNSTYLRVFGPILRQHEIAHRLPGAFWFLLGCCGSLLLFPKDVAQLSVLHLSLGDPCASLFGLTWGHHTSKLSNGKTIAGVVGCMFVCFVTSV------GFLSVVDTSIQH-------------------LSGIQRVGVMA----------------LCGAAGTLGEVLYVGCDDNLSLPLVSGGV 264
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: W4H9K3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9K3_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.880e-35 Identity = 85/241 (35.27%), Postives = 131/241 (54.36%), Query Frame = 1 Query: 97 TAQDIHLRRRAQHAASGMGICLGYKWAIPDARTVLILLSFSCASFLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIHGKQPGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPSGKSLAGSLAAFVVCAMSTLLLFGSCCLLPDEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMSGSDSRRRLLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVSG 819 T +++H+RR+ QHA SG+ + +G +A ++ V ++L+ S +F ++ QLR+++ +V+ YL + GP+LR EI + PGAFWFLLG + ++ IF +DVA S+LHLS+GDP AS G+ LG L +GK++AG FVVC +++ L + + H + G M+ L GV+G VGE L +G DDNLS+P+VSG Sbjct: 63 TTKELHVRRKIQHAGSGVLVVVGSFYA--NSLQVSVVLACSAVAFYIVAQLRKQNNIVNDTYLHVFGPILRQHEIAHRLPGAFWFLLGCSISLLIFKKDVAQLSVLHLSLGDPCASFFGLTLGHHTTKLANGKTIAGVAGCFVVCFATSV------AFLSVVDASVAH-------------------VSGIEKAVVMA----------------LCGVAGTVGEVLYVGCDDNLSLPLVSG 260
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: A0A1V9Z468_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z468_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.440e-34 Identity = 79/241 (32.78%), Postives = 129/241 (53.53%), Query Frame = 1 Query: 97 TAQDIHLRRRAQHAASGMGICLGYKWAIPDARTVLILLSFSCASFLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIHGKQPGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPSGKSLAGSLAAFVVCAMSTLLLFGSCCLLPDEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMSGSDSRRRLLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVSG 819 T Q++HLRR+ QHA +G I + + + ++L+ +F + +R++SK VD +YL++ GP+LR E+H + PGAF+FL G+A + ++P+ +A S+LHLS+GDP AS GI LG + L +GK++AG + F+VC +S+++ L A S ++ Q+ + GV+GA+GE + +G DDNLSMP++SG Sbjct: 62 TTQELHLRRKVQHAGTGALIVVATFYG--TSLEASVVLAICALTFYFVSFMRKQSKAVDAIYLQIFGPILRQHEVHHRLPGAFYFLTGSALSFVVYPKFIAQLSVLHLSLGDPCASFFGITLGQHSTRLWNGKTVAGVIGCFLVCLLSSVVFV---------------------------------TLAAHDAVKSFS-------VIKQMLFMAATGVAGAIGEVVNVGCDDNLSMPLLSG 260
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: A0A067D3P6_SAPPC (Phosphatidate cytidylyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D3P6_SAPPC) HSP 1 Score: 139 bits (349), Expect = 2.650e-34 Identity = 91/271 (33.58%), Postives = 143/271 (52.77%), Query Frame = 1 Query: 34 IPVICAYQYRVTGPRRQLPRDTAQDIHLRRRAQHAASGMGICLG-YKWAIPDARTVLIL--LSFSCASFLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIHGKQPGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPSGKSLAGSLAAFVVCAMSTLLLFGSCCLLPDEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMSGSDSRRRLLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVSGGMFMFL 837 I I A Q+ V T Q++H+RR+ QHA +G+ I + + + +A +L + L+F C SF+ R++SK VD +YL++ GP+LR E+ + PGAF+FL+G+A + ++P+ +A ++LHLS+GDP AS GI LG + L +GK+LAG + F+VC +S++ + H A ++S QL + G++GA+GE L +G DDNLSMP+ SG +FM L Sbjct: 39 ISAILALQFLVVKRSNYSNVRTTQELHVRRKVQHAGTGVLIVVATFYGSALEAAVILAICALTFYCVSFM-----RKQSKAVDAIYLQIFGPILRQHEVGHRLPGAFYFLMGSALSFVLYPKFIAQLAVLHLSLGDPCASFFGITLGQHSTKLWNGKTLAGVIGCFLVCLLSSVAFL----------TTATH-----------------------DAITDLS-------TFQQLLLMGMAGIAGAIGEVLNVGCDDNLSMPLFSG-LFMTL 263
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: A0A1W0ABA5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABA5_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.600e-30 Identity = 85/242 (35.12%), Postives = 127/242 (52.48%), Query Frame = 1 Query: 97 TAQDIHLRRRAQHAASGMGICLGYKWAIPDARTVLILLSFSCAS-FLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIHGKQPGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPSGKSLAGSLAAFVVCAMSTLLLFGSCCLLPDEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMSGSDSRRRLLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVSG 819 T Q++H+RR+ QHA +G+ I + + TV++ + CA F + RR+ K VD +YL++ GP+LR E+ + PGAF+FL G+A + +P+ +A S+LHLS+GDP AS GI LG L +GK+LAG + F VC +S++ S + H +D A +S L Q+ G++GA+GE L +G DDNLSMPI+SG Sbjct: 60 TTQELHVRRKIQHAGTGVLIVIATFYGSSIEATVVLAI---CALIFYGVSVARRQFKAVDTVYLQIFGPILRQHEVGHRLPGAFFFLTGSALSFVFYPKFIAQLSVLHLSLGDPCASFFGITLGHTTSKLWNGKTLAGVIGCFFVCLLSSIAFL----------SFVVH----------HD-------------IAHLS-------WLKQVLIMGTSGIAGAIGEVLNVGCDDNLSMPIISG 258
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: A0A8K1CVZ7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVZ7_PYTOL) HSP 1 Score: 115 bits (288), Expect = 7.460e-26 Identity = 88/266 (33.08%), Postives = 129/266 (48.50%), Query Frame = 1 Query: 34 IPVICAYQYRVTGPRRQLPRDTA---QDIHLRRRAQHAASGMGICLGYKWAIPDARTVLILLSFSCA-SFLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIH-GKQPGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPSGKSLAGSLAAFVVCAMSTLLLFGSCCLLPDEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMSGSDSRRRLLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVS 816 I VI A+Q+ + G R ++ QD+HL+R+AQHA +G+ I + P V +L F+CA +F L LR+RSK VD LYLR LLR EI PGAF+FL+G+ +++FP +A +ILHLS GDP AS++G + G R L SGKS G L ++V ++ T + G + + + ++ L G+ AV E + G DDNLS+P++S Sbjct: 15 IGVIVAFQFLIGGGRARVDVKAIAKRQDLHLQRKAQHAVTGLMIYV-VSGMFPVYADVTVL--FTCALAFYGLHALRKRSKRVDMLYLRCFHGLLRREEIQKAVLPGAFYFLVGSGLVLSLFPTAIARLAILHLSFGDPSASLIGSRFGRRR--LASGKSFEGFLGCWIVASLVTWVESG---------------------------------------------------ISVSITHSALRGLCAAVAESIDFGWDDNLSLPVIS 224
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Match: A0A2D4BUY6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUY6_PYTIN) HSP 1 Score: 114 bits (285), Expect = 2.010e-25 Identity = 94/269 (34.94%), Postives = 131/269 (48.70%), Query Frame = 1 Query: 34 IPVICAYQYRVTGPR---RQLPRD--TAQDIHLRRRAQHAASGMGICLGYKWAIPDARTVLILLSFSCAS-FLVLDQLRRRSKVVDHLYLRLMGPLLRPSEIHGKQ-PGAFWFLLGAAGAVAIFPRDVALQSILHLSVGDPVASVVGIKLGDRNRVLPS-GKSLAGSLAAFVVCAMSTLLLFGSCCLLPDEGSDLRHGAASGGGRDSYDRSSNGSMLGGFSACAEMSGSDSRRRLLLQLWYALLGGVSGAVGEFLPLGVDDNLSMPIVS 816 + I +Q+ + G R R D T Q +HL+R+ QHA +G I + DA VL+L FSCA+ F VL LR+R K VD +YL LLR EI PGAF+FL+GA +A+FP +A +ILHLS+GDP AS+VG R S KSL GSL V+C++ ++L+ + D G+ S ++ W A G+ +V E + +GVDDNLSMP++S Sbjct: 12 VSAIVLFQFLIGGXRTDDRYARHDAVTRQXLHLQRKLQHALTGXMIFAASGFFTVDA-AVLVL--FSCAAVFYVLHLLRKRFKRVDEVYLSCFHGLLRHDEIRKTVIPGAFYFLVGAGAVLALFPTPIARLAILHLSLGDPTASLVGTXXRYRRASSASTSKSLEGSLGCLVMCSVVSVLV-----ITRDSGT-------------------------------------SEFERFVRAWSA---GLCASVAERIHVGVDDNLSMPLLS 232 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1114.1027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1114.1027.1 >prot_L-elsbetiae_contig1114.1027.1 ID=prot_L-elsbetiae_contig1114.1027.1|Name=mRNA_L-elsbetiae_contig1114.1027.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp MGICLGYKWAIPDARTVLILLSFSCASFLVLDQLRRRSKVVDHLYLRLMGback to top mRNA from alignment at L-elsbetiae_contig1114:23521..27564- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1114.1027.1 ID=mRNA_L-elsbetiae_contig1114.1027.1|Name=mRNA_L-elsbetiae_contig1114.1027.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4044bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:23521..27564- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1114:23521..27564- >mRNA_L-elsbetiae_contig1114.1027.1 ID=mRNA_L-elsbetiae_contig1114.1027.1|Name=mRNA_L-elsbetiae_contig1114.1027.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1446bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:23521..27564- (Laminarionema elsbetiae ELsaHSoW15)back to top |