mRNA_L-elsbetiae_contig1114.1026.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI) HSP 1 Score: 488 bits (1255), Expect = 7.160e-172 Identity = 243/277 (87.73%), Postives = 262/277 (94.58%), Query Frame = 1 Query: 1 MAAGRAPPQQPPFPWRSDMLDGKHAIVTGGSAGIGAAITEALLQAGASVAVLAKNRSEFDEFLPILEDKKLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARRKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTKVMSAEWSKYDINCNTVGPTIVLTNMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTTGTPCG 831 M GRA P +P FPWRSDML GK AIVTGGSAGIGAAIT ALLQAGASVAVLA++RS++D+ +P+LE++KLPVDKT FISIDL+ST D IR+AA+EANEWAGGC DILVNNAGVA+IAPILEA+VEDWDWTMNVNVRAPFIMAQECAKRMIAR +GGKIVSTSSTASLFALHDHAAYCTSKAAI GLTKVMSAEWSKYDINCNTVGPTIVLT+MGAKAWGEPEKGDPM+DRTPLGRFAEPWEMAHGVV+LVSPSSSQMCGQMLLLDGGITTTGTPCG Sbjct: 1 MPTGRAAPAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDKTTFISIDLSST-DAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 276
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI) HSP 1 Score: 456 bits (1174), Expect = 7.950e-160 Identity = 228/260 (87.69%), Postives = 246/260 (94.62%), Query Frame = 1 Query: 55 MLDGKHAIVTGGSAGIGAAITEALLQAGASVAVLAKNRSEFDEFLPILEDKKLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARRKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTKVMSAEWSKYDINCNTVGPTIVLTNMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTTGTPCGV 834 ML K AIVTGGSAGIGA+ITEALL+AGASVAVLA++RS+FD LP+LE+KKLPVDKTHFI IDL+ST D IRRAA+EAN+WAGGC DILVNNAGVA+IAPILEAT+EDWDWTMNVNVRAPFIMAQECAKRMIAR KGGKIV+TSSTAS FALHDHAAYCTSKAAINGLTKVMSAEWSK+DINCNT+GPTIVLT+M KAWG+PEKGDPMVDRTPLGRFAEPWEMAHGVV+LVSPSS QMCGQMLLLDGGITTTGTPCGV Sbjct: 1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSST-DDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGITTTGTPCGV 259
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE) HSP 1 Score: 463 bits (1191), Expect = 3.880e-159 Identity = 247/345 (71.59%), Postives = 264/345 (76.52%), Query Frame = 1 Query: 1 MAAGRAPPQQPPFPWRSDMLDGKHAIVTGGSAGIGAAITEALLQAGASVAVLAKNRSEFDEFLPILEDKKLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNV------------------------------------------NVRAPFIMAQECAKRMIARRKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLT-------------------------KVMSAEWSKYDINCNTVGPTIVLTNMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTTGTPCGV 834 MA GRA P++PPFPWR DML GK AIVTGGSAGIGA+ITEALL+AGASVAVLA++RS+FD LPILE+KKLPVDKTHFI IDL+ST D IRRAAIEAN+WAGGC DILVNNAGVA+IAPILEAT+EDWDWTMNV NVRAPFIMAQECAKRMI R KGGKIV+TSSTAS FALHDHAAYCTSKAAINGLT KVMSAEWSK+DINCNT+GPTIVLT+MGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVV+LVSPSSSQMCGQMLLLDGGITTTGTPCGV Sbjct: 130 MATGRAAPEEPPFPWRCDMLAGKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPILEEKKLPVDKTHFIPIDLSST-DDIRRAAIEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGRLVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCGV 473
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA) HSP 1 Score: 242 bits (618), Expect = 1.800e-75 Identity = 135/258 (52.33%), Postives = 178/258 (68.99%), Query Frame = 1 Query: 37 FPWRSDMLDGKHAIVTGGSAGIGAAITEALLQAGASVAVLAKNRSEFDEFLPILEDKKLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARRKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTKVMSAEWSKYDINCNTVGPTIVLTNMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 810 FP+R +L + A+VTGG+ GIG AIT AL++AGAS AV+A+++++FD L E + D FI DL S AD A A WA G VDILVNNAGVA + P+ E VE WD M VN RAPF+MAQ CA MI +R GKI++ SS A + DHAAYC SKAAI+ LT+VM+ EW+K++I N++GPT+V+T MG + WG G+PM RTP+GRFAEP E+A+ VV+L S +S+ +CGQ LL++GG+T Sbjct: 7 FPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAMLDTHEFLQGSAD---FIQADLES-ADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQR-AGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: D7G8H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H2_ECTSI) HSP 1 Score: 215 bits (548), Expect = 1.890e-66 Identity = 108/137 (78.83%), Postives = 123/137 (89.78%), Query Frame = 1 Query: 1 MAAGRAPPQQPPFPWRSDMLDGKHAIVTGGSAGIGAAITEALLQAGASVAVLAKNRSEFDEFLPILEDKKLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNVNVR 411 MA GRAP ++PPFPWR DML GK AIVTGG +GIGA+ITEALL+AGASVAVLA++RS+FD LP+LE+KKLPVDKTHFI IDL+ST D IRRAA+EAN+WAGGC DILVNNAGVA+IAPILEAT+EDWDWTMNV R Sbjct: 1 MATGRAPREEPPFPWRCDMLAGKAAIVTGGRSGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSST-DDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRNR 136
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: A0A2W2BIP4_9HYPH (Short-chain dehydrogenase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BIP4_9HYPH) HSP 1 Score: 218 bits (554), Expect = 6.810e-66 Identity = 123/251 (49.00%), Postives = 162/251 (64.54%), Query Frame = 1 Query: 58 LDGKHAIVTGGSAGIGAAITEALLQAGASVAVLAKNRSEFDEFLPILEDKKLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARRKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTKVMSAEWSKYDINCNTVGPTIVLTNMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 810 L GKHA+VTG S GIG + L AGA +A + ++R E +E + IS D+A TADG +AA +A + G +DILVNNAG+A I + +A V DWD TM VN+RAPF++A+E MI RKGGKI++ SS A + L HAAYC SK +N LTKVM+ EW+K++I NTV PT++LT MG + WG+PEKGDPM + P GRF P E+A ++FL S +S +CG LL+DGG T Sbjct: 10 LKGKHALVTGASKGIGLETAKVLADAGADIAAVGRDREGLAEVKAAVEAMGR---RCVAISADMA-TADGPVKAAHDALAYFGA-IDILVNNAGIALIDRLEDARVADWDATMAVNLRAPFLLARELVPGMI-ERKGGKIINVSSQAGVVGLEGHAAYCASKGGLNMLTKVMTVEWAKHNIQINTVCPTVILTPMGEQVWGQPEKGDPMKAKIPGGRFGRPMEVADAILFLASSASDMICGHDLLVDGGYT 254
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: A0A6G6X370_9HYPH (Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6X370_9HYPH) HSP 1 Score: 213 bits (541), Expect = 6.110e-64 Identity = 117/251 (46.61%), Postives = 164/251 (65.34%), Query Frame = 1 Query: 58 LDGKHAIVTGGSAGIGAAITEALLQAGASVAVLAKNRSEFDEFLPILEDKKLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARRKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTKVMSAEWSKYDINCNTVGPTIVLTNMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 810 L GK A+VTG + GIG I + L AGA +A + ++ + E +E K I+ DLAS I A + G +DILVNNAG+A I +LEA+++DWD TM VN+RAPF++A+E A +MIA+R GKI++ SS A + A+ HAAY SK +N LTKVM+ EW++++I N + PTI+LT MG + WG+P KG PM+DRTPLGRF +P E+A V++L S +S +CG+ +L+DGG T Sbjct: 10 LTGKAALVTGATKGIGLDICKVLADAGADIAAVGRDEAGLAEVSRAVEALGR---KCVTIAADLASAEGPIEAARTALQSF--GTIDILVNNAGIALIDTLLEASIDDWDKTMAVNLRAPFLLAKELAPKMIAQR-AGKIINISSQAGIVAIDGHAAYSASKGGLNMLTKVMTCEWARHNIQTNAICPTIILTPMGEQVWGDPAKGKPMLDRTPLGRFGKPQEVADLVLYLASHASDLVCGETILIDGGFT 254
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: A0A7J7ILT2_9RHOD (Short-chain dehydrogenase reductase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILT2_9RHOD) HSP 1 Score: 211 bits (538), Expect = 1.890e-63 Identity = 121/258 (46.90%), Postives = 168/258 (65.12%), Query Frame = 1 Query: 43 WRSDMLDGKHAIVTGGSAGIGAAITEALLQAGASVAVLAKNRSEFDEFLPILEDK-KLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKR-MIARRKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTKVMSAEWSKYDINCNTVGPTIVLTNMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 810 +R+D+L GK A+VTG S GIGAAI + L+AG S VL E EF+ L + +L + F S++L TA R A +W+ VDILVNNAG+A + P+ E ++ +W+ TM VNVRAPF++A++ + MI R GGKI++ SS ASL + +HAAYC+SKAA+N LTK M+ EW Y I CN V P+I++T+MG + W +PEK P++ R P+GRFA P E+A V+FL SP + + GQ + DGG T Sbjct: 3 FRADVLQGKVAVVTGASRGIGAAIADCFLEAGVSGLVLISR--EQTEFVHQLRKRAELKGSRVGFYSLELEDTAAVERCAEQILQDWSQ--VDILVNNAGLALLNPLTELSIGEWERTMAVNVRAPFLLARKFVRESMIPRGVGGKIINISSVASLGGVSEHAAYCSSKAALNSLTKTMAIEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: UPI00041FB755 (glucose 1-dehydrogenase n=1 Tax=Propionicicella superfundia TaxID=348582 RepID=UPI00041FB755) HSP 1 Score: 208 bits (530), Expect = 2.730e-62 Identity = 118/251 (47.01%), Postives = 159/251 (63.35%), Query Frame = 1 Query: 58 LDGKHAIVTGGSAGIGAAITEALLQAGASVAVLAKNRSEFDEFLPILEDKKLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARRKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTKVMSAEWSKYDINCNTVGPTIVLTNMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 810 + GK AIVTGGS GIG A L +AGA VA++ ++ + E +++ PV H ++ D+ TA G R+AA +A GG DI+VN AG+A IAP+ E + EDWD T+ VN+ APF QE MIA+ K GK+V+ SS A + AL H AYC SK IN LTK+M+ EW +I N V PT++LT MG K WG+P K DPM+ + PLGRF +P E+A V+FL S +S + G ++L+DGG T Sbjct: 9 VSGKKAIVTGGSRGIGQACAVVLAEAGAEVAIVGRDTAALAESEALVKAAGNPV---HVVTGDVL-TASGARQAARDALAALGGVADIVVNCAGIARIAPLTELSQEDWDDTIAVNLTAPFAFTQEVVGPMIAQ-KSGKVVNISSQAGVIALDGHGAYCASKGGINMLTKMMALEWGPSNIQVNAVAPTVILTPMGTKVWGDPAKADPMLAKIPLGRFGQPVEVADLVLFLSSSASDLITGDVILIDGGYT 254
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Match: M1USM2_CYAM1 (Short chain dehydrogenase/reductase family protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1USM2_CYAM1) HSP 1 Score: 208 bits (530), Expect = 3.000e-62 Identity = 119/258 (46.12%), Postives = 162/258 (62.79%), Query Frame = 1 Query: 43 WRSDMLDGKHAIVTGGSAGIGAAITEALLQAGAS-VAVLAKNRSEFDEFLPILEDKKLPVDKTHFISIDLASTADGIRRAAIEANEWAGGCVDILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKR-MIARRKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTKVMSAEWSKYDINCNTVGPTIVLTNMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 810 +RSD L GK A++TG S GIGAAI E L+AG +A++++ SEF L + + K F S++LA T R A +W VDILVNNAG+A + P+ E + DWD TM VNVRAPF++++ + MI R GGKI+ SS A+ + +HAAYC SKAA+N LTK M+ EW Y I CN V P+I++T+MG + W +PEK P++ R P+GRFA P E+A V+FL SP + + GQ + DGG T Sbjct: 3 FRSDALQGKVAVITGASRGIGAAIAECFLEAGVQGLALISRTPSEFVTQLRKRAESR--GTKVGFYSLNLADTEAVERTARQIVQDWEH--VDILVNNAGIALLNPLTELSTVDWDLTMTVNVRAPFLLSRIFVRESMIPRGAGGKIIHISSVAAFGGVPEHAAYCASKAALNSLTKTMAVEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1114.1026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1114.1026.1 >prot_L-elsbetiae_contig1114.1026.1 ID=prot_L-elsbetiae_contig1114.1026.1|Name=mRNA_L-elsbetiae_contig1114.1026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=279bp MAAGRAPPQQPPFPWRSDMLDGKHAIVTGGSAGIGAAITEALLQAGASVAback to top mRNA from alignment at L-elsbetiae_contig1114:19913..23212+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1114.1026.1 ID=mRNA_L-elsbetiae_contig1114.1026.1|Name=mRNA_L-elsbetiae_contig1114.1026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3300bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:19913..23212+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1114:19913..23212+ >mRNA_L-elsbetiae_contig1114.1026.1 ID=mRNA_L-elsbetiae_contig1114.1026.1|Name=mRNA_L-elsbetiae_contig1114.1026.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1674bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:19913..23212+ (Laminarionema elsbetiae ELsaHSoW15)back to top |