mRNA_L-elsbetiae_contig1114.1024.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1114.1024.1
Unique NamemRNA_L-elsbetiae_contig1114.1024.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI)

HSP 1 Score: 493 bits (1269), Expect = 3.890e-171
Identity = 242/276 (87.68%), Postives = 262/276 (94.93%), Query Frame = 1
Query:  304 MPTGRPAPEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTTGTPCG 1131
            MPTGR AP EPAFPWRSDML GK AIVTGGSAGIGAAIT ALL+AG SVAVLARS++KYD L+P+LEE+KLP +KTTFISIDLSSTD IR+A +EANEWAGGCADILVNNAGVA+IA +++ ++E WDWTMNVNVRAPFIMAQECAKRMIARG+GGKIVSTSSTASLFALHDHAAYCTSKAA+QGLT+VMSAEWSKYDINCNT+GPTIVLTDMGAKAWG PEKGDPMIDRTPLGRFAEPWEMAHGVV+LVSPSSSQMCGQMLLLDGGITTTGTPCG
Sbjct:    1 MPTGRAAPAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDKTTFISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 276          
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 3.250e-153
Identity = 221/258 (85.66%), Postives = 239/258 (92.64%), Query Frame = 1
Query:  358 MLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTTGTPCG 1131
            ML  K AIVTGGSAGIGA+IT ALLRAG SVAVLARS++K+D LLP+LEEKKLP +KT FI IDLSSTDDIRRA +EAN+WAGGCADILVNNAGVA+IA +++ TIE WDWTMNVNVRAPFIMAQECAKRMIARGKGGKIV+TSSTAS FALHDHAAYCTSKAA+ GLT+VMSAEWSK+DINCNTIGPTIVLTDM  KAWG PEKGDPM+DRTPLGRFAEPWEMAHGVV+LVSPSS QMCGQMLLLDGGITTTGTPCG
Sbjct:    1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGITTTGTPCG 258          
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 2.540e-151
Identity = 240/343 (69.97%), Postives = 256/343 (74.64%), Query Frame = 1
Query:  304 MPTGRPAPEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNV------------------------------------------NVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLT-------------------------QVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTTGTPCG 1131
            M TGR APEEP FPWR DML GK AIVTGGSAGIGA+IT ALLRAG SVAVLARS++K+D LLPILEEKKLP +KT FI IDLSSTDDIRRA IEAN+WAGGCADILVNNAGVA+IA +++ TIE WDWTMNV                                          NVRAPFIMAQECAKRMI RGKGGKIV+TSSTAS FALHDHAAYCTSKAA+ GLT                         +VMSAEWSK+DINCNTIGPTIVLTDMGAKAWG PEKGDPM+DRTPLGRFAEPWEMAHGVV+LVSPSSSQMCGQMLLLDGGITTTGTPCG
Sbjct:  130 MATGRAAPEEPPFPWRCDMLAGKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPILEEKKLPVDKTHFIPIDLSSTDDIRRAAIEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGRLVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 472          
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA)

HSP 1 Score: 243 bits (621), Expect = 1.160e-73
Identity = 131/257 (50.97%), Postives = 176/257 (68.48%), Query Frame = 1
Query:  340 FPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 1110
            FP+R  +L  + A+VTGG+ GIG AIT AL++AG S AV+ARS+AK+DA+L   +  +  +    FI  DL S D    A   A  WA G  DILVNNAGVA +  L +  +E WD  M VN RAPF+MAQ CA  MI + + GKI++ SS A    + DHAAYC SKAA+  LT+VM+ EW+K++I  N+IGPT+V+T+MG + WG    G+PM  RTP+GRFAEP E+A+ VV+L S +S+ +CGQ LL++GG+T
Sbjct:    7 FPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAML---DTHEFLQGSADFIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQ-RAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258          
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A518B898_9BACT (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B898_9BACT)

HSP 1 Score: 211 bits (536), Expect = 4.770e-61
Identity = 119/252 (47.22%), Postives = 158/252 (62.70%), Query Frame = 1
Query:  361 LEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTT 1116
            L GK A+VTG S G+GA I T    AG  VA++AR +   + L       +    +   I+ DL +T+  R A   A E  G   DILVNNAG+  + SL + TI+ WD TM +N+RAPF++A+E A RMI +G G KIVS SS A +  L +H AYC SK  +Q L  VM AEWS+++I  N I PT+V+TDMG + W  P K  PM+DR P+GRF EP E+A   +FL SP+S  +CGQ++ +DGGIT T
Sbjct:   10 LIGKRALVTGASRGLGAQIATLFAEAGADVALVARDE---EGLHQTKATVEAGGRQALVIAADLGTTEGPREAASTALEHFGAI-DILVNNAGIVHLESLREATIDHWDETMAINLRAPFLLARELAPRMIEQGSG-KIVSISSVAGVRGLPNHGAYCASKGGLQMLNAVMVAEWSRHNIQANVIAPTVVMTDMGKQVWSDPAKSGPMLDRIPMGRFGEPVEIADLALFLASPASDFVCGQVIEIDGGITQT 256          
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: M2Y1V9_GALSU (Short-chain dehydrogenase/reductase SDR n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1V9_GALSU)

HSP 1 Score: 206 bits (524), Expect = 2.410e-59
Identity = 113/252 (44.84%), Postives = 165/252 (65.48%), Query Frame = 1
Query:  361 LEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLAR-SQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITT 1113
            L GK A+VTGG+ GIG +I+ AL   G  +A++AR +++  + +  +  E++  K   T    DLS    +R++  +     G   DILVNNAG++ + SL++ + + WD TMNVN++APFI++QE AK MI R K GKI+  SS A++ A+ +HAAYC SKA +  LT++M+ EW  Y+I  N I PT+V T+MG + WGAPEK +PM++R P  RF +P E+A   VFL  P S  +CGQ + +DGG+TT
Sbjct:   10 LVGKKAVVTGGNKGIGESISLALAGKGADIAIVARDTESAQNVIKKVRSERRFCKIYPT----DLSDAASVRKSAKDILADMGR-VDILVNNAGMSQLESLLEFSEDNWDRTMNVNLKAPFILSQEFAKGMIER-KSGKIIHISSVAAIHAVDEHAAYCVSKAGLCMLTKMMALEWGPYNIQTNAIAPTVVWTEMGQRVWGAPEKHEPMLERIPAHRFVKPEEVAELTVFLAGPGSDMICGQTIAVDGGLTT 255          
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: D7G8H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H2_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.020e-58
Identity = 102/136 (75.00%), Postives = 115/136 (84.56%), Query Frame = 1
Query:  304 MPTGRPAPEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVR 711
            M TGR   EEP FPWR DML GK AIVTGG +GIGA+IT ALLRAG SVAVLARS++K+D LLP+LEEKKLP +KT FI IDLSSTDDIRRA +EAN+WAGGCADILVNNAGVA+IA +++ TIE WDWTMNV  R
Sbjct:    1 MATGRAPREEPPFPWRCDMLAGKAAIVTGGRSGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRNR 136          
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A7J7ILT2_9RHOD (Short-chain dehydrogenase reductase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILT2_9RHOD)

HSP 1 Score: 204 bits (519), Expect = 1.440e-58
Identity = 117/259 (45.17%), Postives = 167/259 (64.48%), Query Frame = 1
Query:  346 WRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVL-ARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEA--NEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKR-MIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 1110
            +R+D+L+GK A+VTG S GIGAAI    L AG S  VL +R Q ++  +  + +  +L   +  F S++L  T  + R C E    +W+    DILVNNAG+A +  L + +I +W+ TM VNVRAPF++A++  +  MI RG GGKI++ SS ASL  + +HAAYC+SKAA+  LT+ M+ EW  Y I CN + P+I++TDMG + W  PEK  P++ R P+GRFA P E+A  V+FL SP +  + GQ +  DGG T
Sbjct:    3 FRADVLQGKVAVVTGASRGIGAAIADCFLEAGVSGLVLISREQTEF--VHQLRKRAELKGSRVGFYSLELEDTAAVER-CAEQILQDWSQ--VDILVNNAGLALLNPLTELSIGEWERTMAVNVRAPFLLARKFVRESMIPRGVGGKIINISSVASLGGVSEHAAYCSSKAALNSLTKTMAIEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256          
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A6G6X370_9HYPH (Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6X370_9HYPH)

HSP 1 Score: 199 bits (505), Expect = 1.500e-56
Identity = 112/250 (44.80%), Postives = 160/250 (64.00%), Query Frame = 1
Query:  361 LEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 1110
            L GK A+VTG + GIG  I   L  AG  +A + R +A    L  +    +    K   I+ DL+S +    A   A + + G  DILVNNAG+A I +L++ +I+ WD TM VN+RAPF++A+E A +MIA+ + GKI++ SS A + A+  HAAY  SK  +  LT+VM+ EW++++I  N I PTI+LT MG + WG P KG PM+DRTPLGRF +P E+A  V++L S +S  +CG+ +L+DGG T
Sbjct:   10 LTGKAALVTGATKGIGLDICKVLADAGADIAAVGRDEA---GLAEVSRAVEALGRKCVTIAADLASAEGPIEAARTALQ-SFGTIDILVNNAGIALIDTLLEASIDDWDKTMAVNLRAPFLLAKELAPKMIAQ-RAGKIINISSQAGIVAIDGHAAYSASKGGLNMLTKVMTCEWARHNIQTNAICPTIILTPMGEQVWGDPAKGKPMLDRTPLGRFGKPQEVADLVLYLASHASDLVCGETILIDGGFT 254          
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: D7FSQ4_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ4_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 3.180e-56
Identity = 109/266 (40.98%), Postives = 164/266 (61.65%), Query Frame = 1
Query:  325 PEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTT----FISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 1110
            P+EP  P+  D+L GK A+VTGG+ GIG AIT AL++AG  V V+A ++A Y  ++   E       + T    ++  DL    +      +A +WAGG  DILVNNAG+  +   +D + + +D  + +N RAP +++Q C + MI + K GKIV+ +S +++ A   HA+YC SKAA+ GL   +  + ++++I  N I PT+  +DMG K WG P K  PM++RTP+GRF EPWE+A+ VVFL S + +   GQ + +DGG T
Sbjct:   77 PQEPVRPFVPDLLSGKQALVTGGNRGIGEAITVALVKAGAHVCVMAGNEAAYRDMV---ERHGFDDTEGTGNVYWVQADLRVPSEAIAGAQKAVDWAGGSLDILVNNAGICVLEDFMDISSDTFDEVIAINTRAPLLVSQVCLQGMI-KNKSGKIVNITSQSAVIATKAHASYCASKAAMDGLLHGLVCDLAQHNIQVNNIAPTVAWSDMGIKTWGDPAKSRPMLERTPIGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYT 338          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8H1_ECTSI3.890e-17187.68Similar to L-xylulose reductase (XR) (Dicarbonyl/L... [more]
D7G8H0_ECTSI3.250e-15385.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWZ3_9PHAE2.540e-15169.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTK4_9STRA1.160e-7350.97Putative short-chain dehydrogenase n=1 Tax=Tribone... [more]
A0A518B898_9BACT4.770e-6147.222-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 ... [more]
M2Y1V9_GALSU2.410e-5944.84Short-chain dehydrogenase/reductase SDR n=1 Tax=Ga... [more]
D7G8H2_ECTSI1.020e-5875.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7J7ILT2_9RHOD1.440e-5845.17Short-chain dehydrogenase reductase n=1 Tax=Cyanid... [more]
A0A6G6X370_9HYPH1.500e-5644.80Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteri... [more]
D7FSQ4_ECTSI3.180e-5640.98Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1114contigL-elsbetiae_contig1114:13987..18082 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score497.7
Seed ortholog evalue3.6e-138
Seed eggNOG ortholog2880.D7G8H1
Preferred nameDCXR
KEGG rclassRC00102,RC00154,RC01491
KEGG koko:K00081,ko:K03331
KEGG ReactionR01904,R02581,R09420
KEGG Pathwayko00040,ko00590,ko00980,ko01100,map00040,map00590,map00980,map01100
KEGG ModuleM00014
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004090,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005874,GO:0005881,GO:0005886,GO:0005902,GO:0005903,GO:0005975,GO:0005996,GO:0005997,GO:0005998,GO:0006006,GO:0006063,GO:0006064,GO:0006082,GO:0006116,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016651,GO:0016655,GO:0019318,GO:0019321,GO:0019323,GO:0019362,GO:0019585,GO:0019637,GO:0019640,GO:0019674,GO:0019752,GO:0022607,GO:0032787,GO:0034641,GO:0042802,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0043621,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0046395,GO:0046483,GO:0046496,GO:0050038,GO:0051167,GO:0051186,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072524,GO:0090407,GO:0098858,GO:0098862,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:1901135,GO:1901137,GO:1901159,GO:1901360,GO:1901564,GO:1901575,GO:1901576
EggNOG free text desc.L-xylulose reductase (NAD ) activity
EggNOG OGsKOG1207@1,KOG1207@2759
EC1.1.1.10,1.1.1.184
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size1589
Cds size840
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1114.1024.1prot_L-elsbetiae_contig1114.1024.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1114 14290..17636 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815327.957006-UTR-L-elsbetiae_contig1114:13986..142891622815327.957006-UTR-L-elsbetiae_contig1114:13986..14289Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1114 13987..14289 +
1691682841.4803188-UTR-L-elsbetiae_contig1114:13986..142891691682841.4803188-UTR-L-elsbetiae_contig1114:13986..14289Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1114 13987..14289 +
1622815328.0683045-UTR-L-elsbetiae_contig1114:17636..180821622815328.0683045-UTR-L-elsbetiae_contig1114:17636..18082Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1114 17637..18082 +
1691682841.560625-UTR-L-elsbetiae_contig1114:17636..180821691682841.560625-UTR-L-elsbetiae_contig1114:17636..18082Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1114 17637..18082 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815327.96671-CDS-L-elsbetiae_contig1114:14289..144151622815327.96671-CDS-L-elsbetiae_contig1114:14289..14415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 14290..14415 +
1691682841.5014665-CDS-L-elsbetiae_contig1114:14289..144151691682841.5014665-CDS-L-elsbetiae_contig1114:14289..14415Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 14290..14415 +
1622815327.9761407-CDS-L-elsbetiae_contig1114:14648..148531622815327.9761407-CDS-L-elsbetiae_contig1114:14648..14853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 14649..14853 +
1691682841.512334-CDS-L-elsbetiae_contig1114:14648..148531691682841.512334-CDS-L-elsbetiae_contig1114:14648..14853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 14649..14853 +
1622815327.9956563-CDS-L-elsbetiae_contig1114:15985..160501622815327.9956563-CDS-L-elsbetiae_contig1114:15985..16050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 15986..16050 +
1691682841.521565-CDS-L-elsbetiae_contig1114:15985..160501691682841.521565-CDS-L-elsbetiae_contig1114:15985..16050Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 15986..16050 +
1622815328.013392-CDS-L-elsbetiae_contig1114:16411..165791622815328.013392-CDS-L-elsbetiae_contig1114:16411..16579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 16412..16579 +
1691682841.5303733-CDS-L-elsbetiae_contig1114:16411..165791691682841.5303733-CDS-L-elsbetiae_contig1114:16411..16579Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 16412..16579 +
1622815328.0330076-CDS-L-elsbetiae_contig1114:16908..170001622815328.0330076-CDS-L-elsbetiae_contig1114:16908..17000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 16909..17000 +
1691682841.5410976-CDS-L-elsbetiae_contig1114:16908..170001691682841.5410976-CDS-L-elsbetiae_contig1114:16908..17000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 16909..17000 +
1622815328.04869-CDS-L-elsbetiae_contig1114:17452..176361622815328.04869-CDS-L-elsbetiae_contig1114:17452..17636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 17453..17636 +
1691682841.5521927-CDS-L-elsbetiae_contig1114:17452..176361691682841.5521927-CDS-L-elsbetiae_contig1114:17452..17636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1114 17453..17636 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1114.1024.1

>prot_L-elsbetiae_contig1114.1024.1 ID=prot_L-elsbetiae_contig1114.1024.1|Name=mRNA_L-elsbetiae_contig1114.1024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp
MPTGRPAPEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVA
VLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWA
GGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMI
ARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDIN
CNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLV
SPSSSQMCGQMLLLDGGITTTGTPCGKYS*
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mRNA from alignment at L-elsbetiae_contig1114:13987..18082+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1114.1024.1 ID=mRNA_L-elsbetiae_contig1114.1024.1|Name=mRNA_L-elsbetiae_contig1114.1024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4096bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:13987..18082+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGCATGTGATTGGCAGCGGGTTAAATTATATTCGCCCGATGCCCGGCG TGACCGTGCGGAGAAACACTTGACATTAGAATAGAGGAAAGTGTCTTGAA TTTAAAGAAGGATTCAGCGGGAAATATGTCTCGGGTCAACGGGTAATAAC GCAACGGAGTGTTAGGGTGTCGTTTGCTCATATCTCGCCTCCTCTCAGCC GCCCACTCGCTCACTCTCAATCCAGCCTCCTCTGCTCTCTCCTACTCCAC AGCAAACACCTCCCCCGCAAGCTCTCTACTTCTTTCAGCACACACACGCA ACCATGCCTACCGGTAGACCCGCACCTGAGGAGCCTGCGTTCCCTTGGAG GAGCGACATGTTGGAAGGAAAGTTCGCCATCGTTACAGGCGGGTCAGCAG GGATTGGCGCCGCCATCACGACGGCACTGGTAAGACGTGAAGAGGTTGCT GCGTTTGCTGCGTTTGCTGCGTTTGCTGCGTTTGCTGCGTTTGCTGCAGC TGCTGCGGCTACTGCCCTGCTGTGTTGCACATCCTTTTTGTTCTTCGTAC CCAGGGTTTCACGCGCATATAATCTTAGCCAATTCCCCCGGCTTCTCCTC TAACCGCCCATACCCTGGTGCTCGGATCTGTTTCTTGTCTTCCGCTCGGG TGGCCTCATTAGCTCCGAGCAGGATGCTCGGTTGCGGTTCTCGCGAGGAG CCAGGCCAAATACGACGCGCTTCTCCCCATCCTCGAGGAGAAGAAGCTTC CCAAGGAAAAGACCACCTTCATCTCCATCGATCTCTCGAGCACGGACGAC ATCAGGCGGGCATGCATCGAGGCGAACGAGTGGGCCGGCGGCTGCGCGGA CATTCTCGTCAACAACGGTGAGCCGGGTTGCTCCGAGTATGGTTTGTGAC CCAGCAGGCGCGTCAGTGAGACAATGAGGGATTGTTTTGGTGCGCATAGA TTTTTCAGAACATATTTTGTGGTCGAATGATCCATGCATGCCGCGTGCCC TGCTCTATTTTTTTCGAGGGGCGTGACGGATCAGCCACACGAGCGTTTGT CCGACGGCGTCTTCTCGCCGCAGCAGCTGTGAACCAACAACTGTTGAACA CGGAGCCAGCAAGATCTAGCAGACACCGCTTAAGGCTTGCGCCGCCGCAC GCAACAAACAGAAGACACCCTCCTGCGAGCGCATGTCGTCCTACAAATAA TTTTTCCCTTCGAGCTGGCGTGCTCAACACACGCTTTGATGAGAGGGAGA GCTACGGCTGTACGATTAGCTAGAGCCTGGCGGCCGTTTTTCTGCATAGC CAGCTGCTAGTTAGAGGGGGTTGTGCTGTACATGCCCCAACCCCAGCACG CCGCTGCACCCCAAATTGATCGCAGAAATGTGTGATCGCGGGGCATCATT ACGCATCGGACAGTCTCGGACGATGAACCCTGTAGTCTTGTGCATTCCCC GCATACATGCATATTTTAGATATAATATGTACATGTGATATTTGTCCGAC AGAGATTGCGGCTACATGAAATTGAGAAACAAGCAGATATCGTTCGATTT ATATCGCAAACCTCCTCTCTGCGCATGTGTACACACACAAGTTGCACCGC CAGCGGATGATGGCCGATCTCTTTCACACACTAAAGAGTACAGGAGTACA TCTACATGTCCCCATGCGTACAGCAAAGCAGTGGCTAGCACATGTCGATC ATACGGAAGAGACTCACATGGTGAGCGTGCACCGATCTACTCCCTCCCTA GTACCGTACGTATTGTTTACTATATTTGTGAGCTACTCCTTTTCCCTGTC CAGCCAGCAGTGGCTGCACCGCTACGTACTGCTGTTGATGACACTGTATG TATGCTATTGCTCGCCGACCAGAGGTTTCAGGCGTCCTTGCATATACGCT ATACTCCGCATTGGCTCGTGAACTCTTCAACGCGCGCCCGCACCTCACCC ACTCCACCCACCCACCCTGTCCTGCCTCTGCTTTTGTCCCATTTTCCAGC TGGCGTGGCGTCCATCGCGTCCCTCGTAGACGAGACCATCGAAAAGTGGG ACTGGACCATGAACGTGAGACGAGAGATGGGCATGCACAAGAGTAGCTCA ACTTATTTTGTAGCGTCATGTGTTGCACAAAAGGCGGGTCGTGTCGCATC TATCGCATTTTCAGAAAGCATCTAATCTGATCAGTTTGTATCTTATCTAG TCTCACGCGATTACACAAAACTTGAAAGAAAAGTATATAAATACCTGCAG CAGTAATTTATGGCCGTGAGCAGGTACGTAGTTTTGAGTCGCCTGCGAGT CTTATCGTTCTGTGGAAACGATCCCCTCGAAGGTTGAAACTGCTGTTGCC TGCTGCTGTTGAGGGGAAGTTCACCCTACACTTGTGTCTGCTCCCTTGTC GCTGCTCTTGTTTACCCCCCTCCAGGTGAACGTCAGAGCGCCGTTCATCA TGGCCCAGGAGTGTGCCAAGAGGATGATTGCCCGCGGAAAGGGAGGCAAG ATCGTCAGCACCTCCAGCACGGCCTCCCTCTTCGCGCTGCACGACCACGC GGCCTACTGCACCAGCAAGGCCGCCGTCCAGGGCCTCACCCAGGTAAGTC TTTTGCCGATCTAGGAGGGAGGTCGGCACTTCCTCTTGCGTAAGACAAGG CATGCTTCACTGCTATGTACTGCCTCGAAATGAAACGAGGACTGCACGAA AAGGGGTTAGTACGTATACCTGCAATAGTCTGAACAATGTTTTTGCAGAC AGGACGTTTGACAGCTGACATTTGTATACATCGATTAAAAAAGTTTTATT GGCTTGAGCACTACTTGCACCAGCTCTGATAAATGTTTCGTTGACGGGCT TTGTTTTATCTCCCCTGTTGTGCGTCTCTGCCGGGTTCTGCTCTGCGTCG TCTCCATCGGGGGGTGCGATAGGTGATGAGCGCGGAGTGGTCCAAGTACG ACATCAACTGCAACACGATCGGCCCCACCATCGTCTTGACCGACATGGGC GCCAAGGCCTGGGGGTGAGTTTTGACAACCTTTATCTTGGTTGCTTCTTC CTCGCCTCAAGAAGTTTTTAACCCAGATGCTTGCCCCAGATCTTGGCATG GCAAGAAGTGTGTTTTGTCCGGACACACGCGGCCATGTAGGCATTTAGAG GAAACTGTCAGGAACCCGTATGGTAGTTTTGCACAACATATACAGTAGCA GTACATTTGATGTATTGATGCGCGTACTTGGCAATTCTTAAGTGAACTTA ACCATGGACAGGAACGCACAGATGGTCGATCAAGGTTTGCTACATAGCGG TCGAACGTTGAAGGCAATCCTTTTCTAAGGTGTTGGCTCTTGGCCTTTGC TAGACCAACTCCGTAGTCCTCGCCTTAAATCACGCGAAGACTTTCACGTA TGTATTCTCAAAACTCGCCCTTCTTCCTGCCACTTTGTCTCGCCTGCCCC GATCTAATCCGTGCAGCGCGCCGGAGAAGGGAGACCCCATGATTGACCGC ACCCCCCTTGGCCGCTTCGCGGAGCCCTGGGAGATGGCGCACGGCGTGGT CTTCCTCGTCAGCCCGTCCTCCAGCCAGATGTGCGGCCAGATGCTCCTCC TAGACGGTGGCATCACCACCACTGGCACCCCCTGCGGAAAATACTCCTAG GAACACTAGGAACGCCGACGCCTCGATTTTTGTGCGCGGCGTGCGCATGA ATTCGTGCCTCGAGGTTTATTGATGTTTTTCTTTGGCCTGTTTTTGCACG GCCTTGTATCTAGCACGGACTAGAGTGCTTTCGCTGTGTAGGTCGGTATG CGCGTTGAAAGCGCGTTAAGATTGCGCCTTCTTGAGCGTGATTTTTTGTG GTCGGGGTGAAACCTGTTTTCGCCTTGACGTTTATATTTTAGCGTAGGTA GAAATCTTATGATCGGGGTGATACCGAGTTCAGTGTTAAATAATGATGGA GGCTTAATTGCACCGCAGTCAAGCCCGATGCCCGACCTTGAGTGAGGGGG CAAGACCCACCGTGGTCAACCTTGGTCGTTAACTGACAAACGTGTTTTTT GATTCGGTTGGTTCGGTTCTTCGCTGGGCCTTCCATCTCAATGACG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1114:13987..18082+

>mRNA_L-elsbetiae_contig1114.1024.1 ID=mRNA_L-elsbetiae_contig1114.1024.1|Name=mRNA_L-elsbetiae_contig1114.1024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1680bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:13987..18082+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTACCGGTAGACCCGCACCTGAGGAGCCTGCGTTCCCTTGGAGGAG
CGACATGTTGGAAGGAAAGTTCGCCATCGTTACAGGCGGGTCAGCAGGGA
TTGGCGCCGCCATCACGACGGCACTGATGCCTACCGGTAGACCCGCACCT
GAGGAGCCTGCGTTCCCTTGGAGGAGCGACATGTTGGAAGGAAAGTTCGC
CATCGTTACAGGCGGGTCAGCAGGGATTGGCGCCGCCATCACGACGGCAC
TGCTCCGAGCAGGATGCTCGGTTGCGGTTCTCGCGAGGAGCCAGGCCAAA
TACGACGCGCTTCTCCCCATCCTCGAGGAGAAGAAGCTTCCCAAGGAAAA
GACCACCTTCATCTCCATCGATCTCTCGAGCACGGACGACATCAGGCGGG
CATGCATCGAGGCGAACGAGTGGGCCGGCGGCTGCGCGGACATTCTCGTC
AACAACGCTCCGAGCAGGATGCTCGGTTGCGGTTCTCGCGAGGAGCCAGG
CCAAATACGACGCGCTTCTCCCCATCCTCGAGGAGAAGAAGCTTCCCAAG
GAAAAGACCACCTTCATCTCCATCGATCTCTCGAGCACGGACGACATCAG
GCGGGCATGCATCGAGGCGAACGAGTGGGCCGGCGGCTGCGCGGACATTC
TCGTCAACAACGCTGGCGTGGCGTCCATCGCGTCCCTCGTAGACGAGACC
ATCGAAAAGTGGGACTGGACCATGAACCTGGCGTGGCGTCCATCGCGTCC
CTCGTAGACGAGACCATCGAAAAGTGGGACTGGACCATGAACGTGAACGT
CAGAGCGCCGTTCATCATGGCCCAGGAGTGTGCCAAGAGGATGATTGCCC
GCGGAAAGGGAGGCAAGATCGTCAGCACCTCCAGCACGGCCTCCCTCTTC
GCGCTGCACGACCACGCGGCCTACTGCACCAGCAAGGCCGCCGTCCAGGG
CCTCACCCAGGTGAACGTCAGAGCGCCGTTCATCATGGCCCAGGAGTGTG
CCAAGAGGATGATTGCCCGCGGAAAGGGAGGCAAGATCGTCAGCACCTCC
AGCACGGCCTCCCTCTTCGCGCTGCACGACCACGCGGCCTACTGCACCAG
CAAGGCCGCCGTCCAGGGCCTCACCCAGGTGATGAGCGCGGAGTGGTCCA
AGTACGACATCAACTGCAACACGATCGGCCCCACCATCGTCTTGACCGAC
ATGGGCGCCAAGGCCTGGGGGTGATGAGCGCGGAGTGGTCCAAGTACGAC
ATCAACTGCAACACGATCGGCCCCACCATCGTCTTGACCGACATGGGCGC
CAAGGCCTGGGGCGCGCCGGAGAAGGGAGACCCCATGATTGACCGCACCC
CCCTTGGCCGCTTCGCGGAGCCCTGGGAGATGGCGCACGGCGTGGTCTTC
CTCGTCAGCCCGTCCTCCAGCCAGATGTGCGGCCAGATGCTCCTCCTAGA
CGGTGGCATCACCACCACTGGCACCCCCTGCGGAAAATACTCCTAGCGCG
CCGGAGAAGGGAGACCCCATGATTGACCGCACCCCCCTTGGCCGCTTCGC
GGAGCCCTGGGAGATGGCGCACGGCGTGGTCTTCCTCGTCAGCCCGTCCT
CCAGCCAGATGTGCGGCCAGATGCTCCTCCTAGACGGTGGCATCACCACC
ACTGGCACCCCCTGCGGAAAATACTCCTAG
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