mRNA_L-elsbetiae_contig1114.1024.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI) HSP 1 Score: 493 bits (1269), Expect = 3.890e-171 Identity = 242/276 (87.68%), Postives = 262/276 (94.93%), Query Frame = 1 Query: 304 MPTGRPAPEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTTGTPCG 1131 MPTGR AP EPAFPWRSDML GK AIVTGGSAGIGAAIT ALL+AG SVAVLARS++KYD L+P+LEE+KLP +KTTFISIDLSSTD IR+A +EANEWAGGCADILVNNAGVA+IA +++ ++E WDWTMNVNVRAPFIMAQECAKRMIARG+GGKIVSTSSTASLFALHDHAAYCTSKAA+QGLT+VMSAEWSKYDINCNT+GPTIVLTDMGAKAWG PEKGDPMIDRTPLGRFAEPWEMAHGVV+LVSPSSSQMCGQMLLLDGGITTTGTPCG Sbjct: 1 MPTGRAAPAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDKTTFISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 276
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI) HSP 1 Score: 447 bits (1149), Expect = 3.250e-153 Identity = 221/258 (85.66%), Postives = 239/258 (92.64%), Query Frame = 1 Query: 358 MLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTTGTPCG 1131 ML K AIVTGGSAGIGA+IT ALLRAG SVAVLARS++K+D LLP+LEEKKLP +KT FI IDLSSTDDIRRA +EAN+WAGGCADILVNNAGVA+IA +++ TIE WDWTMNVNVRAPFIMAQECAKRMIARGKGGKIV+TSSTAS FALHDHAAYCTSKAA+ GLT+VMSAEWSK+DINCNTIGPTIVLTDM KAWG PEKGDPM+DRTPLGRFAEPWEMAHGVV+LVSPSS QMCGQMLLLDGGITTTGTPCG Sbjct: 1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGITTTGTPCG 258
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE) HSP 1 Score: 450 bits (1158), Expect = 2.540e-151 Identity = 240/343 (69.97%), Postives = 256/343 (74.64%), Query Frame = 1 Query: 304 MPTGRPAPEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNV------------------------------------------NVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLT-------------------------QVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTTGTPCG 1131 M TGR APEEP FPWR DML GK AIVTGGSAGIGA+IT ALLRAG SVAVLARS++K+D LLPILEEKKLP +KT FI IDLSSTDDIRRA IEAN+WAGGCADILVNNAGVA+IA +++ TIE WDWTMNV NVRAPFIMAQECAKRMI RGKGGKIV+TSSTAS FALHDHAAYCTSKAA+ GLT +VMSAEWSK+DINCNTIGPTIVLTDMGAKAWG PEKGDPM+DRTPLGRFAEPWEMAHGVV+LVSPSSSQMCGQMLLLDGGITTTGTPCG Sbjct: 130 MATGRAAPEEPPFPWRCDMLAGKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPILEEKKLPVDKTHFIPIDLSSTDDIRRAAIEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGRLVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 472
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA) HSP 1 Score: 243 bits (621), Expect = 1.160e-73 Identity = 131/257 (50.97%), Postives = 176/257 (68.48%), Query Frame = 1 Query: 340 FPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 1110 FP+R +L + A+VTGG+ GIG AIT AL++AG S AV+ARS+AK+DA+L + + + FI DL S D A A WA G DILVNNAGVA + L + +E WD M VN RAPF+MAQ CA MI + + GKI++ SS A + DHAAYC SKAA+ LT+VM+ EW+K++I N+IGPT+V+T+MG + WG G+PM RTP+GRFAEP E+A+ VV+L S +S+ +CGQ LL++GG+T Sbjct: 7 FPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAML---DTHEFLQGSADFIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQ-RAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A518B898_9BACT (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B898_9BACT) HSP 1 Score: 211 bits (536), Expect = 4.770e-61 Identity = 119/252 (47.22%), Postives = 158/252 (62.70%), Query Frame = 1 Query: 361 LEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITTT 1116 L GK A+VTG S G+GA I T AG VA++AR + + L + + I+ DL +T+ R A A E G DILVNNAG+ + SL + TI+ WD TM +N+RAPF++A+E A RMI +G G KIVS SS A + L +H AYC SK +Q L VM AEWS+++I N I PT+V+TDMG + W P K PM+DR P+GRF EP E+A +FL SP+S +CGQ++ +DGGIT T Sbjct: 10 LIGKRALVTGASRGLGAQIATLFAEAGADVALVARDE---EGLHQTKATVEAGGRQALVIAADLGTTEGPREAASTALEHFGAI-DILVNNAGIVHLESLREATIDHWDETMAINLRAPFLLARELAPRMIEQGSG-KIVSISSVAGVRGLPNHGAYCASKGGLQMLNAVMVAEWSRHNIQANVIAPTVVMTDMGKQVWSDPAKSGPMLDRIPMGRFGEPVEIADLALFLASPASDFVCGQVIEIDGGITQT 256
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: M2Y1V9_GALSU (Short-chain dehydrogenase/reductase SDR n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1V9_GALSU) HSP 1 Score: 206 bits (524), Expect = 2.410e-59 Identity = 113/252 (44.84%), Postives = 165/252 (65.48%), Query Frame = 1 Query: 361 LEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLAR-SQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGITT 1113 L GK A+VTGG+ GIG +I+ AL G +A++AR +++ + + + E++ K T DLS +R++ + G DILVNNAG++ + SL++ + + WD TMNVN++APFI++QE AK MI R K GKI+ SS A++ A+ +HAAYC SKA + LT++M+ EW Y+I N I PT+V T+MG + WGAPEK +PM++R P RF +P E+A VFL P S +CGQ + +DGG+TT Sbjct: 10 LVGKKAVVTGGNKGIGESISLALAGKGADIAIVARDTESAQNVIKKVRSERRFCKIYPT----DLSDAASVRKSAKDILADMGR-VDILVNNAGMSQLESLLEFSEDNWDRTMNVNLKAPFILSQEFAKGMIER-KSGKIIHISSVAAIHAVDEHAAYCVSKAGLCMLTKMMALEWGPYNIQTNAIAPTVVWTEMGQRVWGAPEKHEPMLERIPAHRFVKPEEVAELTVFLAGPGSDMICGQTIAVDGGLTT 255
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: D7G8H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H2_ECTSI) HSP 1 Score: 201 bits (510), Expect = 1.020e-58 Identity = 102/136 (75.00%), Postives = 115/136 (84.56%), Query Frame = 1 Query: 304 MPTGRPAPEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVR 711 M TGR EEP FPWR DML GK AIVTGG +GIGA+IT ALLRAG SVAVLARS++K+D LLP+LEEKKLP +KT FI IDLSSTDDIRRA +EAN+WAGGCADILVNNAGVA+IA +++ TIE WDWTMNV R Sbjct: 1 MATGRAPREEPPFPWRCDMLAGKAAIVTGGRSGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRNR 136
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A7J7ILT2_9RHOD (Short-chain dehydrogenase reductase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILT2_9RHOD) HSP 1 Score: 204 bits (519), Expect = 1.440e-58 Identity = 117/259 (45.17%), Postives = 167/259 (64.48%), Query Frame = 1 Query: 346 WRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVL-ARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEA--NEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKR-MIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 1110 +R+D+L+GK A+VTG S GIGAAI L AG S VL +R Q ++ + + + +L + F S++L T + R C E +W+ DILVNNAG+A + L + +I +W+ TM VNVRAPF++A++ + MI RG GGKI++ SS ASL + +HAAYC+SKAA+ LT+ M+ EW Y I CN + P+I++TDMG + W PEK P++ R P+GRFA P E+A V+FL SP + + GQ + DGG T Sbjct: 3 FRADVLQGKVAVVTGASRGIGAAIADCFLEAGVSGLVLISREQTEF--VHQLRKRAELKGSRVGFYSLELEDTAAVER-CAEQILQDWSQ--VDILVNNAGLALLNPLTELSIGEWERTMAVNVRAPFLLARKFVRESMIPRGVGGKIINISSVASLGGVSEHAAYCSSKAALNSLTKTMAIEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: A0A6G6X370_9HYPH (Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6X370_9HYPH) HSP 1 Score: 199 bits (505), Expect = 1.500e-56 Identity = 112/250 (44.80%), Postives = 160/250 (64.00%), Query Frame = 1 Query: 361 LEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTTFISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 1110 L GK A+VTG + GIG I L AG +A + R +A L + + K I+ DL+S + A A + + G DILVNNAG+A I +L++ +I+ WD TM VN+RAPF++A+E A +MIA+ + GKI++ SS A + A+ HAAY SK + LT+VM+ EW++++I N I PTI+LT MG + WG P KG PM+DRTPLGRF +P E+A V++L S +S +CG+ +L+DGG T Sbjct: 10 LTGKAALVTGATKGIGLDICKVLADAGADIAAVGRDEA---GLAEVSRAVEALGRKCVTIAADLASAEGPIEAARTALQ-SFGTIDILVNNAGIALIDTLLEASIDDWDKTMAVNLRAPFLLAKELAPKMIAQ-RAGKIINISSQAGIVAIDGHAAYSASKGGLNMLTKVMTCEWARHNIQTNAICPTIILTPMGEQVWGDPAKGKPMLDRTPLGRFGKPQEVADLVLYLASHASDLVCGETILIDGGFT 254
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Match: D7FSQ4_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ4_ECTSI) HSP 1 Score: 201 bits (510), Expect = 3.180e-56 Identity = 109/266 (40.98%), Postives = 164/266 (61.65%), Query Frame = 1 Query: 325 PEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAVLARSQAKYDALLPILEEKKLPKEKTT----FISIDLSSTDDIRRACIEANEWAGGCADILVNNAGVASIASLVDETIEKWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAVQGLTQVMSAEWSKYDINCNTIGPTIVLTDMGAKAWGAPEKGDPMIDRTPLGRFAEPWEMAHGVVFLVSPSSSQMCGQMLLLDGGIT 1110 P+EP P+ D+L GK A+VTGG+ GIG AIT AL++AG V V+A ++A Y ++ E + T ++ DL + +A +WAGG DILVNNAG+ + +D + + +D + +N RAP +++Q C + MI + K GKIV+ +S +++ A HA+YC SKAA+ GL + + ++++I N I PT+ +DMG K WG P K PM++RTP+GRF EPWE+A+ VVFL S + + GQ + +DGG T Sbjct: 77 PQEPVRPFVPDLLSGKQALVTGGNRGIGEAITVALVKAGAHVCVMAGNEAAYRDMV---ERHGFDDTEGTGNVYWVQADLRVPSEAIAGAQKAVDWAGGSLDILVNNAGICVLEDFMDISSDTFDEVIAINTRAPLLVSQVCLQGMI-KNKSGKIVNITSQSAVIATKAHASYCASKAAMDGLLHGLVCDLAQHNIQVNNIAPTVAWSDMGIKTWGDPAKSRPMLERTPIGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYT 338 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1114.1024.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1114.1024.1 >prot_L-elsbetiae_contig1114.1024.1 ID=prot_L-elsbetiae_contig1114.1024.1|Name=mRNA_L-elsbetiae_contig1114.1024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=280bp MPTGRPAPEEPAFPWRSDMLEGKFAIVTGGSAGIGAAITTALLRAGCSVAback to top mRNA from alignment at L-elsbetiae_contig1114:13987..18082+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1114.1024.1 ID=mRNA_L-elsbetiae_contig1114.1024.1|Name=mRNA_L-elsbetiae_contig1114.1024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4096bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:13987..18082+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1114:13987..18082+ >mRNA_L-elsbetiae_contig1114.1024.1 ID=mRNA_L-elsbetiae_contig1114.1024.1|Name=mRNA_L-elsbetiae_contig1114.1024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1680bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:13987..18082+ (Laminarionema elsbetiae ELsaHSoW15)back to top |