mRNA_L-elsbetiae_contig1114.1023.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: D7G4N3_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N3_ECTSI) HSP 1 Score: 234 bits (596), Expect = 5.470e-74 Identity = 108/130 (83.08%), Postives = 117/130 (90.00%), Query Frame = 1 Query: 1 LYFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKHYSK 390 L+F +A+PEAVSNILKQCYGDPDQVTEELV+CILTPGLE GAVKVFLDFISYSGGPLPE+LL IKVPV I WG +DPWEP+EQG+AYA+FD VE F ELPGAGHCPMDEAP LTDPVVLDFVAKHY K Sbjct: 251 LFFGSVAKPEAVSNILKQCYGDPDQVTEELVKCILTPGLEEGAVKVFLDFISYSGGPLPEDLLAAIKVPVQIAWGVEDPWEPMEQGKAYAEFDSVEGFVELPGAGHCPMDEAPHLTDPVVLDFVAKHYKK 380
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: A0A835YVL0_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVL0_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.050e-59 Identity = 88/128 (68.75%), Postives = 104/128 (81.25%), Query Frame = 1 Query: 4 YFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKHYS 387 +F+ +A+ +AV N+L+QCYGDP VT+ELV+CIL PGLE GAVKVFLDFISYSGGPLPEELL ++VPV+IGWG++DPWEPI QGR YA F VEDF LPG GHCP DEAPQL + +V FV KH S Sbjct: 140 FFANVAKAKAVKNVLQQCYGDPAAVTDELVDCILRPGLEPGAVKVFLDFISYSGGPLPEELLPEMQVPVLIGWGEKDPWEPIAQGREYAKFKCVEDFVTLPGVGHCPQDEAPQLVNEIVRKFVLKHQS 267
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: UPI00053C3450 (pheophytinase, chloroplastic n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3450) HSP 1 Score: 194 bits (492), Expect = 3.060e-58 Identity = 88/132 (66.67%), Postives = 106/132 (80.30%), Query Frame = 1 Query: 1 LYFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKHYSKSS 396 L+F +A PE+V NIL+QCY D QVT+ELVE IL PGLE GAV VFL+FI YSGGPLPEELL +++ PV+IGWGD+DPWEPIE GRAYADFD VEDF LPG GHCP DE P++ +P++ FVA+H S +S Sbjct: 254 LFFKSVATPESVRNILRQCYHDRTQVTDELVEAILRPGLEPGAVDVFLEFICYSGGPLPEELLPLVQCPVLIGWGDKDPWEPIELGRAYADFDTVEDFVVLPGVGHCPQDERPEMVNPLIESFVARHSSCTS 385
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: I3S2B9_LOTJA (Uncharacterized protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3S2B9_LOTJA) HSP 1 Score: 183 bits (465), Expect = 8.230e-57 Identity = 85/131 (64.89%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 4 YFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKHYSKSS 396 +F IA E+V NIL QCY D QVT+ELV+ IL+PGLE GAV+VFL+FI YSGGPLPEELL ++K PV+I WGD+DPWEPIE GR Y +FD VEDF LP GHCP DEAP L +P+V FVA+H SS Sbjct: 42 FFKAIATKESVRNILCQCYHDTSQVTDELVQIILSPGLEPGAVEVFLEFICYSGGPLPEELLPLVKCPVLIAWGDKDPWEPIEMGRNYGNFDSVEDFIVLPNVGHCPQDEAPDLVNPLVESFVARHAKSSS 172
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: A0A251NQC2_PRUPE (AB hydrolase-1 domain-containing protein n=3 Tax=Amygdaloideae TaxID=171637 RepID=A0A251NQC2_PRUPE) HSP 1 Score: 184 bits (467), Expect = 1.100e-55 Identity = 86/131 (65.65%), Postives = 101/131 (77.10%), Query Frame = 1 Query: 4 YFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKHYSKSS 396 +F +A PE+V NIL QCY D QVTEELV+ IL PGLE GAV VFL+FI YSGGPLPEELL +K PV+IGWG++DPWEPIE GRAY FD VEDF LP GHCP DEAP+L +P+V FVA+H + S+ Sbjct: 151 FFKTVATPESVRNILCQCYHDTSQVTEELVQKILLPGLEPGAVDVFLEFICYSGGPLPEELLPQVKCPVLIGWGEKDPWEPIELGRAYGKFDSVEDFVVLPNVGHCPQDEAPELVNPLVESFVARHAALSA 281
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: A0A843VKC0_COLES (AB hydrolase-1 domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843VKC0_COLES) HSP 1 Score: 180 bits (457), Expect = 2.610e-55 Identity = 81/131 (61.83%), Postives = 99/131 (75.57%), Query Frame = 1 Query: 1 LYFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKHYSKS 393 L++ +A P+AV +IL QCY D +VTEELV+ IL PGLE GA +VFL+FI YSGGPLPEELL +K PV++ WGD+DPWEPIE GRAY +FD VEDF LP GHCP DE P+L +P++ FVAKH S Sbjct: 68 LFYKSVATPDAVRSILCQCYHDTSKVTEELVQKILQPGLEPGAAEVFLEFICYSGGPLPEELLPQVKCPVLVAWGDKDPWEPIELGRAYGEFDTVEDFVVLPNVGHCPQDETPELVNPLIESFVAKHIKNS 198
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: A0A803Q0F2_CANSA (AB hydrolase-1 domain-containing protein n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q0F2_CANSA) HSP 1 Score: 186 bits (472), Expect = 2.740e-55 Identity = 86/131 (65.65%), Postives = 99/131 (75.57%), Query Frame = 1 Query: 4 YFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKHYSKSS 396 +F +A PEAV NIL QCY D QVT+ELV+ IL PGLE GA VFL+FI YSGGPLPEELL +K PV+IGWGD+DPWEPIE GRAY FD VEDF LP GHCP DEAP L +P+V FVA+H + S+ Sbjct: 247 FFKTVATPEAVRNILSQCYHDTSQVTDELVQSILLPGLEPGAADVFLEFICYSGGPLPEELLPQVKCPVLIGWGDKDPWEPIELGRAYQSFDSVEDFVVLPNVGHCPQDEAPNLVNPLVESFVARHATSST 377
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: A0A067EGV4_CITSI (AB hydrolase-1 domain-containing protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067EGV4_CITSI) HSP 1 Score: 180 bits (457), Expect = 3.050e-55 Identity = 83/127 (65.35%), Postives = 96/127 (75.59%), Query Frame = 1 Query: 1 LYFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKH 381 L++ +A E+V NIL QCY D QVTEELVE IL PGLE+GA VFL+FI YSGGPLPEELL +K PV+I WGD+DPWEPIE GRAY +FD VEDF LP GHCP DEAP L +P+V FV +H Sbjct: 62 LFYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPLPEELLPQVKCPVLIAWGDKDPWEPIELGRAYGNFDSVEDFIVLPNVGHCPQDEAPHLVNPLVESFVTRH 188
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: UPI00053AF596 (pheophytinase, chloroplastic isoform X2 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053AF596) HSP 1 Score: 182 bits (461), Expect = 3.320e-55 Identity = 82/127 (64.57%), Postives = 101/127 (79.53%), Query Frame = 1 Query: 1 LYFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKH 381 L+F IA+PE V +IL QCY D QVT+ELVE IL PGLE GAV VFL+FI YSGGPLPE+LL ++K PV+I WG++DPWEPIE GRAY++FD VEDF LP AGHCP DE P++ +P++ FVA+H Sbjct: 127 LFFKSIAKPETVKSILCQCYHDSSQVTDELVEAILRPGLEPGAVDVFLEFICYSGGPLPEDLLPLVKCPVLIAWGEKDPWEPIELGRAYSNFDAVEDFVVLPEAGHCPQDEKPEMVNPLIESFVARH 253
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Match: A0A2N9J414_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J414_FAGSY) HSP 1 Score: 179 bits (454), Expect = 4.670e-55 Identity = 80/131 (61.07%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 4 YFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFISYSGGPLPEELLEVIKVPVVIGWGDQDPWEPIEQGRAYADFDIVEDFFELPGAGHCPMDEAPQLTDPVVLDFVAKHYSKSS 396 ++ +A+PE+V +IL+QCY D QVTEELV+ IL PGLE GA VFL+FI YSGGPLPEELL +K P++I WGD+DPWEP+E GR Y +FD VEDF LP GHCP DEAP L +P+V FVA+H + S+ Sbjct: 48 FYKSVAKPESVRSILRQCYHDTSQVTEELVQKILNPGLEPGAADVFLEFICYSGGPLPEELLPQVKCPILIAWGDKDPWEPLELGRNYGNFDSVEDFVVLPNVGHCPQDEAPHLVNPLVKSFVARHATPST 178 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1114.1023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1114.1023.1 >prot_L-elsbetiae_contig1114.1023.1 ID=prot_L-elsbetiae_contig1114.1023.1|Name=mRNA_L-elsbetiae_contig1114.1023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp LYFSFIAQPEAVSNILKQCYGDPDQVTEELVECILTPGLESGAVKVFLDFback to top mRNA from alignment at L-elsbetiae_contig1114:8274..9797- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1114.1023.1 ID=mRNA_L-elsbetiae_contig1114.1023.1|Name=mRNA_L-elsbetiae_contig1114.1023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1524bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:8274..9797- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1114:8274..9797- >mRNA_L-elsbetiae_contig1114.1023.1 ID=mRNA_L-elsbetiae_contig1114.1023.1|Name=mRNA_L-elsbetiae_contig1114.1023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig1114:8274..9797- (Laminarionema elsbetiae ELsaHSoW15)back to top |