mRNA_L-elsbetiae_contig11122.1009.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: A0A6H5JAK2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK2_9PHAE) HSP 1 Score: 164 bits (414), Expect = 4.030e-44 Identity = 93/194 (47.94%), Postives = 129/194 (66.49%), Query Frame = -3 Query: 1 IPAKQFQSCLRANRKEARNGIAGEVAKQSLGGEMWDRDNKPTTTLAVYDVE-VPALGGGRASG---DGVDIEVDGT-PTPATEG-DPLLHFRSASGG--GVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKVFAAIVGLEDG 558 +P+ Q+ LRA+ K AR+GIA +A + L E+W D KP +A Y V P L +G +GV +E+ G T A G +PLLHFR+ + GVE Q G +IGEAELS+ HFI+WA++YWGK F +W+V+SV TD WM ILLAM+TG ++ GEGAV V V+KVVG +++++N+VFA+I L+DG Sbjct: 360 VPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDG 553
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 164 bits (414), Expect = 2.310e-43 Identity = 93/194 (47.94%), Postives = 129/194 (66.49%), Query Frame = -3 Query: 1 IPAKQFQSCLRANRKEARNGIAGEVAKQSLGGEMWDRDNKPTTTLAVYDVE-VPALGGGRASG---DGVDIEVDGT-PTPATEG-DPLLHFRSASGG--GVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKVFAAIVGLEDG 558 +P+ Q+ LRA+ K AR+GIA +A + L E+W D KP +A Y V P L +G +GV +E+ G T A G +PLLHFR+ + GVE Q G +IGEAELS+ HFI+WA++YWGK F +W+V+SV TD WM ILLAM+TG ++ GEGAV V V+KVVG +++++N+VFA+I L+DG Sbjct: 449 VPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDG 642
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 164 bits (414), Expect = 2.470e-43 Identity = 93/194 (47.94%), Postives = 129/194 (66.49%), Query Frame = -3 Query: 1 IPAKQFQSCLRANRKEARNGIAGEVAKQSLGGEMWDRDNKPTTTLAVYDVE-VPALGGGRASG---DGVDIEVDGT-PTPATEG-DPLLHFRSASGG--GVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKVFAAIVGLEDG 558 +P+ Q+ LRA+ K AR+GIA +A + L E+W D KP +A Y V P L +G +GV +E+ G T A G +PLLHFR+ + GVE Q G +IGEAELS+ HFI+WA++YWGK F +W+V+SV TD WM ILLAM+TG ++ GEGAV V V+KVVG +++++N+VFA+I L+DG Sbjct: 1468 VPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDG 1661
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: A0A6H5L0B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B5_9PHAE) HSP 1 Score: 157 bits (397), Expect = 1.310e-41 Identity = 86/194 (44.33%), Postives = 123/194 (63.40%), Query Frame = -3 Query: 1 IPAKQFQSCLRANRKEARNGIAGEVAKQSLGGEMWDRDNKPTTTLAVY------DVEVPALGGGRASGDGVDIEVDGTPTPATEGDPLLHFRSASGG--GVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKVFAAIVGLEDG 558 +P+ Q+ LRA+ AR+GIA +A + L ++W D KP A Y D+ V G A G G+++ +G +E +PLLHFR + GVE Q G +IGEAELS+ HFI+WA+KYWG+ F +W+V+SV TD WM ILLAM+TG + GE AV V V++VVG +++++N+VFA+I L+DG Sbjct: 167 VPSLQYGPWLRADGMAARDGIATHLATRVLADDVWTGDTKPNGIAAFYGVGGEPDLSVDHPPGVHAEGIGLEVGREGAGKALSETEPLLHFRDGTNTIEGVERQRGPDIGEAELSVIHFIVWAKKYWGESFDKWIVSSVDTDLWMIILLAMTTGWLTPRGERAVDVTVQRVVGGETKFLWMNRVFASICELQDG 360
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: A0A6H5KG39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG39_9PHAE) HSP 1 Score: 155 bits (393), Expect = 3.980e-41 Identity = 91/199 (45.73%), Postives = 114/199 (57.29%), Query Frame = -3 Query: 1 IPAKQFQSCLRANRKEARNGIAGEVAKQSLGGEMWDRDNKPTTTLAVYDV-----------EVPAL--GGGRASGDGVDIEVDGTPTPATEGDPLLHFRSASGGGVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKVFAAIVGLEDG 558 IP Q+QS LR N+K AR+G A +A L + W D P +A Y V PA+ GGG G EV P E + + V+ + G IGEAEL L HFI+WA+KYWG F WLVTSV TD WM +LLAM+TG ++A+G+GAV V V+KVVG P+YI+VN+VFAAI GL DG Sbjct: 160 IPQSQYQSWLRDNQKAARDGFAAHLAMDILDDKRWTGDCTPRGIVAFYSVGGEAGLKTPHAADPAVSSGGGVPGGPSTSPEVP-VPVDGVESSTIHSGGDGTEXSVQRERGPKIGEAELPLVHFIVWAKKYWGLNFENWLVTSVDTDHWMIMLLAMNTGFLKASGKGAVEVTVQKVVGGAPKYIWVNRVFAAISGLRDG 357
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: D8LEN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN1_ECTSI) HSP 1 Score: 154 bits (390), Expect = 1.040e-40 Identity = 87/194 (44.85%), Postives = 121/194 (62.37%), Query Frame = -3 Query: 1 IPAKQFQSCLRANRKEARNGIAGEVAKQSLGGEMWDRDNKPTTTLAVY------DVEVPALGGGRASGDGVDIEVDGTPTPATEGDPLLHFRSASGG--GVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKVFAAIVGLEDG 558 +P+ Q+ S LRA+ K AR+GIA +A + L ++W D KP +A Y D+ G A G G+++ +G E +PLLHFR + GVE Q G +IGEAELS+ HFI WA+KYWG+ F +W+V+SV TD WM ILLAM+TG + GE AV V V +VVG +++++N VFA+I L+DG Sbjct: 104 VPSLQYGSWLRADGKAARDGIAAHLATRVLADDVWTGDTKPNGIVAFYGVGGEPDLSADHPPGVDAEGIGLEMAREGAGEALPETEPLLHFRDRTDTIEGVERQRGPDIGEAELSVIHFIAWAKKYWGRSFDKWVVSSVDTDLWMIILLAMTTGWLTPRGERAVDVTVLRVVGGETKFLWMNGVFASICELQDG 297
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: A0A6H5KTD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD3_9PHAE) HSP 1 Score: 153 bits (386), Expect = 3.650e-40 Identity = 87/178 (48.88%), Postives = 119/178 (66.85%), Query Frame = -3 Query: 1 ARNGIAGEVAKQSLGGEMWDRDNKPTTTLAVYDVE-VPALGGGRASG---DGVDIEVDGT-PTPATEG-DPLLHFRSASGG--GVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKVFAAIVGLEDG 510 AR+GIA +A + L E+W D KP +A Y V P L +G +GV +E+ G T A G +PLLHFR+ + GVE Q G +IGEAELS+ HFI+WA++YWGK F +W+V+SV TD WM ILLAM+TG ++ GEGAV V V+KVVG +++++N+VFA+I L+DG Sbjct: 388 ARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPVLGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFLWMNRVFASICELQDG 565
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: A0A6H5K590_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K590_9PHAE) HSP 1 Score: 148 bits (373), Expect = 1.580e-39 Identity = 86/168 (51.19%), Postives = 104/168 (61.90%), Query Frame = -3 Query: 4 RNGIAGEVAKQSLGGEMWDRDNKPTTTLAVYDVEVPALGGGRASGDGVDIEVDGTPTPATEGDPLLHFRSASGGGVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKVFAAIVGLED 507 R A A S GG P V VE + R+ GDG E G PT A E DPLLH+R + V+ + G NIGEAELSL HFI+WA+KYWG+ WLVTSV TD+WM ILLAM TG ++A+GEGAV V V+ VVG P+YI+VN+VFA+I GL D Sbjct: 102 RTSDAANPAVSSGGGVQGGPATSPEIPAPVGSVENSTV---RSGGDGT--EEGGVPTVAKE-DPLLHYRRGADRSVQRERGLNIGEAELSLVHFIVWAKKYWGRNSENWLVTSVDTDQWMIILLAMRTGFLKASGEGAVEVTVQMVVGGDPKYIWVNRVFASISGLRD 263
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE) HSP 1 Score: 149 bits (376), Expect = 2.230e-38 Identity = 87/190 (45.79%), Postives = 114/190 (60.00%), Query Frame = -3 Query: 31 IPAKQFQSCLRANRKEARNGIAGEVAKQSLGGEMWDRDNKPTTTLAVYDVE------------VPALGGGRASGDGVDIEVDGTPTPATEGDPLLHFRSASGG--GVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKV 558 + A Q+ LRA+RK ARNGIA +A + L E+W D KP +A Y V V A GG G G + GT +PLLHFR+ + GVE Q G +IGEAELS+ HFI+WA+KYWGK F +W+V+SV TD WM ILLAM+TG ++ GEGAV V V+KV G +++ +N+V Sbjct: 579 VTALQYGPWLRADRKAARNGIAAYLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLSADHPAGVDAEGGLEMGGVGATEALSGT-------EPLLHFRNGNDPTPGVERQLGPDIGEAELSVIHFIVWAKKYWGKNFDKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVAGGETKFLCMNRV 761
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Match: A0A6H5KUW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUW9_9PHAE) HSP 1 Score: 147 bits (370), Expect = 4.070e-38 Identity = 85/169 (50.30%), Postives = 105/169 (62.13%), Query Frame = -3 Query: 1 RNGIAGEVAKQSLGGEMWDRDNKPTTTLAVYDVEVPALGGGRASGDGVDIEVDGTPTPATEGDPLLHFRSASGGGVE*QCGTNIGEAELSLFHFIIWAEKYWGKKFMRWLVTSVGTDEWMTILLAMSTGHIQAAGEGAVLVAVRKVVGSVPQYIFVNKVFAAIVGLEDG 507 R A + A + GG P V V+ + R+ G G E G PT A E DPLLH+R +G V+ + G NIGEAELS HFI+WA+KYWG+ F WLVTSV TD+WM ILLA S G ++A+ EGAV V V+KVVG P+YI+VN+VFAAI GL DG Sbjct: 102 RTSDAADPAVRDRGGLPGGPATSPEIPAPVGSVQNSTV---RSGGGGT--EEGGVPTLAEE-DPLLHYRRGAGRSVQRERGPNIGEAELSPVHFIVWAKKYWGRNFENWLVTSVDTDQWMIILLAASMGFLKASVEGAVEVTVQKVVGGAPKYIWVNRVFAAISGLRDG 264 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11122.1009.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11122.1009.1 >prot_L-elsbetiae_contig11122.1009.1 ID=prot_L-elsbetiae_contig11122.1009.1|Name=mRNA_L-elsbetiae_contig11122.1009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp AVLESHDGCEHLVDENVLRHTTHNLAHGYQHRPLAGRLNVPRAHCQQDGHback to top mRNA from alignment at L-elsbetiae_contig11122:45..607+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11122.1009.1 ID=mRNA_L-elsbetiae_contig11122.1009.1|Name=mRNA_L-elsbetiae_contig11122.1009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=563bp|location=Sequence derived from alignment at L-elsbetiae_contig11122:45..607+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11122:45..607+ >mRNA_L-elsbetiae_contig11122.1009.1 ID=mRNA_L-elsbetiae_contig11122.1009.1|Name=mRNA_L-elsbetiae_contig11122.1009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=624bp|location=Sequence derived from alignment at L-elsbetiae_contig11122:45..607+ (Laminarionema elsbetiae ELsaHSoW15)back to top |