mRNA_L-elsbetiae_contig11116.1001.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11116.1001.1
Unique NamemRNA_L-elsbetiae_contig11116.1001.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig11116.1001.1 vs. uniprot
Match: D7FU67_ECTSI (Glucose-6-phosphate isomerase, cytosolic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU67_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.530e-34
Identity = 67/81 (82.72%), Postives = 74/81 (91.36%), Query Frame = 1 
Query:    1 GHEDQAEETLLKLIRDPYNLSDAS-LPDTASDTAEWRRLEMHQKRMKHKHLKDVMALENRSLALSAEFEGTILDYSRMNVS 240
            G EDQAEETLLKLIRDPYNL D S L  +A++TAEWRRL +HQKR+K+KHLKDVMALE+RSLALSAEFEGTILDYSRMNVS
Sbjct:  117 GQEDQAEETLLKLIRDPYNLGDVSWLAKSAAETAEWRRLVVHQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVS 197
[Close]
BLAST of mRNA_L-elsbetiae_contig11116.1001.1 vs. uniprot
Match: A0A836C893_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C893_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.940e-13
Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 1 
Query:   31 LKLIRDPYNLSDASLPDTASDTAEWRRLEMHQKRMKHKHLKDVMALENRSLALSAEFEGTILDYSRMNVS 240
            ++ IRD Y+L     P + S TAEWRRL+ H + +K  HL+DVM    R  ALSAEFEG+ LDYSRM V+
Sbjct:    3 MESIRDSYSLGMKPQPKSVSATAEWRRLKAHARHIKRMHLRDVMGDAARCEALSAEFEGSFLDYSRMQVT 72
[Close]
BLAST of mRNA_L-elsbetiae_contig11116.1001.1 vs. uniprot
Match: A0A836CFZ0_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ0_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.090e-12
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1 
Query:   31 LKLIRDPYNLSDASLPDTASDTAEWRRLEMHQKRMKHKHLKDVMALENRSLALSAEFEGTILDYSRMNVS 240
            ++ IRD Y+L     P + + TAEWRRL++H + +   HL+DV+ + +R  ALSAEFEG+ LDYSRM V+
Sbjct:    3 MESIRDTYSLGLKPQPKSVTATAEWRRLKVHARHIAKMHLRDVLGVASRCEALSAEFEGSFLDYSRMQVT 72
[Close]
BLAST of mRNA_L-elsbetiae_contig11116.1001.1 vs. uniprot
Match: A0A452XP72_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XP72_AEGTS)

HSP 1 Score: 49.7 bits (117), Expect = 4.320e-5
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 1 
Query:   16 AEETLLKLIRDPYNLSDASLPDTASDTAEWRRLEMHQKRMKHKHLKDVMALENRSLALSAEFEGTILDYSRMNVS 240
            A + L    R P   S  + P   SDT +W+ L+ H   +   HL+D+M   +R  A++AEFEG  LDYSR   +
Sbjct:   10 AVDILQGSARPPSAASAMASPALISDTDQWKALQAHVGAIHKTHLRDLMTDADRCKAMTAEFEGVYLDYSRQQAT 84
[Close]
BLAST of mRNA_L-elsbetiae_contig11116.1001.1 vs. uniprot
Match: A0A452XP43_AEGTS (Glucose-6-phosphate isomerase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XP43_AEGTS)

HSP 1 Score: 49.7 bits (117), Expect = 4.460e-5
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 1 
Query:   16 AEETLLKLIRDPYNLSDASLPDTASDTAEWRRLEMHQKRMKHKHLKDVMALENRSLALSAEFEGTILDYSRMNVS 240
            A + L    R P   S  + P   SDT +W+ L+ H   +   HL+D+M   +R  A++AEFEG  LDYSR   +
Sbjct:    8 AVDILQGSARPPSAASAMASPALISDTDQWKALQAHVGAIHKTHLRDLMTDADRCKAMTAEFEGVYLDYSRQQAT 82
[Close]
BLAST of mRNA_L-elsbetiae_contig11116.1001.1 vs. uniprot
Match: A0A452XP51_AEGTS (Glucose-6-phosphate isomerase n=4 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XP51_AEGTS)

HSP 1 Score: 49.7 bits (117), Expect = 4.710e-5
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 1 
Query:   16 AEETLLKLIRDPYNLSDASLPDTASDTAEWRRLEMHQKRMKHKHLKDVMALENRSLALSAEFEGTILDYSRMNVS 240
            A + L    R P   S  + P   SDT +W+ L+ H   +   HL+D+M   +R  A++AEFEG  LDYSR   +
Sbjct:    2 AVDILQGSARPPSAASAMASPALISDTDQWKALQAHVGAIHKTHLRDLMTDADRCKAMTAEFEGVYLDYSRQQAT 76
[Close]
BLAST of mRNA_L-elsbetiae_contig11116.1001.1 vs. uniprot
Match: A0A452XP97_AEGTS (Glucose-6-phosphate isomerase n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XP97_AEGTS)

HSP 1 Score: 49.7 bits (117), Expect = 4.710e-5
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 1 
Query:   16 AEETLLKLIRDPYNLSDASLPDTASDTAEWRRLEMHQKRMKHKHLKDVMALENRSLALSAEFEGTILDYSRMNVS 240
            A + L    R P   S  + P   SDT +W+ L+ H   +   HL+D+M   +R  A++AEFEG  LDYSR   +
Sbjct:   10 AVDILQGSARPPSAASAMASPALISDTDQWKALQAHVGAIHKTHLRDLMTDADRCKAMTAEFEGVYLDYSRQQAT 84
[Close]
BLAST of mRNA_L-elsbetiae_contig11116.1001.1 vs. uniprot
Match: M8AEA8_TRIUA (Glucose-6-phosphate isomerase, cytosolic n=3 Tax=Eukaryota TaxID=2759 RepID=M8AEA8_TRIUA)

HSP 1 Score: 47.4 bits (111), Expect = 8.630e-5
Identity = 23/55 (41.82%), Postives = 33/55 (60.00%), Query Frame = 1 
Query:   76 PDTASDTAEWRRLEMHQKRMKHKHLKDVMALENRSLALSAEFEGTILDYSRMNVS 240
            P   SDT +W+ L+ H   +   HL+D+M   +R  A++AEFEG  LDYSR   +
Sbjct:    4 PVLISDTDQWKALQAHVGAIHKTHLRDLMTDTDRCKAMTAEFEGVFLDYSRQQAT 58
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11116.1001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FU67_ECTSI2.530e-3482.72Glucose-6-phosphate isomerase, cytosolic n=1 Tax=E... [more]
A0A836C893_9STRA8.940e-1352.86Glucose-6-phosphate isomerase n=1 Tax=Tribonema mi... [more]
A0A836CFZ0_9STRA3.090e-1248.57Glucose-6-phosphate isomerase n=1 Tax=Tribonema mi... [more]
A0A452XP72_AEGTS4.320e-537.33Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A452XP43_AEGTS4.460e-537.33Glucose-6-phosphate isomerase n=1 Tax=Aegilops tau... [more]
A0A452XP51_AEGTS4.710e-537.33Glucose-6-phosphate isomerase n=4 Tax=Aegilops tau... [more]
A0A452XP97_AEGTS4.710e-537.33Glucose-6-phosphate isomerase n=1 Tax=Aegilops tau... [more]
M8AEA8_TRIUA8.630e-541.82Glucose-6-phosphate isomerase, cytosolic n=3 Tax=E... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11116contigL-elsbetiae_contig11116:879..6212 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score129.4
Seed ortholog evalue7.4e-28
Seed eggNOG ortholog2880.D7FU67
KEGG rclassRC00376,RC00563
KEGG koko:K01810
KEGG ReactionR02739,R02740,R03321
KEGG Pathwayko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00001,M00004,M00114
Hectar predicted targeting categoryother localisation
EggNOG free text desc.glucose-6-phosphate isomerase activity
EggNOG OGsCOG0166@1,KOG2446@2759
EC5.3.1.9
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Ec32 ortholog descriptionGlucose-6-phosphate isomerase, cytosolic
Ec32 orthologEc-13_003530.1
Exons3
Model size240
Cds size240
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11116.1001.1prot_L-elsbetiae_contig11116.1001.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11116 879..6212 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815325.504217-CDS-L-elsbetiae_contig11116:878..9951622815325.504217-CDS-L-elsbetiae_contig11116:878..995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11116 879..995 +
1691682840.027145-CDS-L-elsbetiae_contig11116:878..9951691682840.027145-CDS-L-elsbetiae_contig11116:878..995Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11116 879..995 +
1622815325.517847-CDS-L-elsbetiae_contig11116:3313..33611622815325.517847-CDS-L-elsbetiae_contig11116:3313..3361Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11116 3314..3361 +
1691682840.04135-CDS-L-elsbetiae_contig11116:3313..33611691682840.04135-CDS-L-elsbetiae_contig11116:3313..3361Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11116 3314..3361 +
1622815325.5322785-CDS-L-elsbetiae_contig11116:6137..62121622815325.5322785-CDS-L-elsbetiae_contig11116:6137..6212Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11116 6138..6212 +
1691682840.0523787-CDS-L-elsbetiae_contig11116:6137..62121691682840.0523787-CDS-L-elsbetiae_contig11116:6137..6212Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11116 6138..6212 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11116.1001.1

>prot_L-elsbetiae_contig11116.1001.1 ID=prot_L-elsbetiae_contig11116.1001.1|Name=mRNA_L-elsbetiae_contig11116.1001.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=80bp
GHEDQAEETLLKLIRDPYNLSDASLPDTASDTAEWRRLEMHQKRMKHKHL
KDVMALENRSLALSAEFEGTILDYSRMNVS
back to top

mRNA from alignment at L-elsbetiae_contig11116:879..6212+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11116.1001.1 ID=mRNA_L-elsbetiae_contig11116.1001.1|Name=mRNA_L-elsbetiae_contig11116.1001.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5334bp|location=Sequence derived from alignment at L-elsbetiae_contig11116:879..6212+ (Laminarionema elsbetiae ELsaHSoW15)
GGCCATGAAGACCAAGCGGAGGAGACGCTCCTGAAGCTCATCAGAGATCC
CTACAACCTGTCCGATGCCTCGCTGCCGGACACCGCCTCGGACACGGCGG
AATGGCGGCGTTTGGAGGTACACAGTAGTTCTATCACGAGTGCGACTGAA
AATCTTTGATCGGTCGCAACTTTTGACTCCGGGCACTGATTTCGAACAAA
AAAAAACTCCATGATGACCGTGACATTACGAACAATAGTTGGCTTTTTGT
TTTTGTTTTTTGAAAAAGCAAATAATTGGCATATTGTTCGAGATATAAAT
ATAAAAATGAGTGAAAAAAAATACCTGATCCAAAAATCGAACTCCTGACC
TACATACAGTCGTCCCCGGCTCAAGGACACTTTTTTTTGTCGCAGGCATG
GTGCCCCGCAGGATGTAACATAGCAGGGGGGCAATAATACATTCCACGGA
ACCCCTTTACACACGCTCACAGCAGTCACAGCTTACCCCTCGTACATAGC
CAAAAGCGAGGTCTACCGCTGCCGTCTGCCGGCACGACGGAATGGCGGCG
GTTGGAGGTATGCAGTGGTTGTACTGTTATAAGTAGGTGACATGCGTCTG
GCTAGCCGTAGTGGAGGAAGGGGGGCCAGTGGGGCAGACGACAAATATGC
CAATAATGGGAGGAACAAGAAAGAACATGCCGGGCACCGACCGCCTCGGA
CACAGCGGAATGGCGGCGGTTGGAGGTATGCAGCAGTAGTAGTACCGTAC
ATAGGTGACACACGTTTTTTTTTGTTTTTTTTTTAAGTGGCCCAGGCTCG
GTCTGCGCTATTTAGCGTGGACCAGGACCGAAGGCGGTCTGCGGCCCCCC
GCAGGGGCCCACCCGACCCGGAGGGGCCCCGCGGAGCGGCGAAATTTGGG
CTTCTCCTTTGAAAATAGCCCTTTTCAATCTAAGTCAAGATGTGGTTAAA
TTTGGGTTTGAGCTGTAGTGAAATGTTTCACAAATATTTGCACGGGGTTT
GATGCAGTTTAACGTACAAAAGTACATATATGGATTACTGGTTTTTAATT
ACATTATTAACAGTTTTTAATGAACTACTGATTTTTAATTAATGTAACTG
ATTTTGTGCGGATATATCTGGGATGGGAAACGGGGGTTAGTATGTTACAT
GGTACGCCTCAAGAGTCCCTCTGGAACGACTTCTTCTTCACAGACTGGAC
GTAAGACTGCTGATATTTGTATGCAATAATTAAAAGTACTCTGTCGGAGA
GAACAAATCAAACAAAACACGGGATATTGCAGTTGAATGTGGATACAACC
TGTCCGATGCCTCGCTCCCGAACACCGCCTCGGACTCGGTGGAATGGCCG
CTGTTGGAGGTATGCAGCAGTAGGTGACACAAGATACCACACCCCCTGGA
CCGAACTTTAGAGCTCCATTACTCCGTAACGAAGAAGGTGCCAGCACCAA
GCAACACATGTTCGGACAGCCCTCGACAGGCCTCGACTAGATCTTTCTAA
TGCCACCTCTTTCGGCACTGGCACTCTTGTTGCTGAGGAGGAATCGAGCT
TTGAAAATATGTCCACGGGGTCCCTCCTGTGTGGCCCCGGTTGGGTCGTC
TGAGCTAGTCGCAGTGGAGTATGAGCGCCAGTGGGGCAGACGACGAGTAC
ATAAAGCCAATAATGGGAGAAAAAAAACACGCACACACACACACACACAC
ACACACACACACACACATGTCACCTACGGTACTACTACTGCTGCATACCG
TAGGTGCCTGCCTCAGATGCTTTTTGGATCTACCTACGTATCTGCAAGTA
TCATACTTAGTGTTCAACGCAAAATACCTTTGTATATTTATGTTAATATT
TCGATAATTCCCTGCCCCAAACCAAATAACGAGAGGGGGGCGGAAACGAA
GAAAAATGTTGGCCACAGGCATGTACAGGTGAATTTTTGATTGAGCACGA
CACGCAACTGCGATTAAATAACCCGAAGGGACGCGGGAGACAAATGAAAT
GTCTATGTAGCGAGTGCGAACACCCACATCACAGGAAGCCGACGCTAACG
AGAAGAACAGCAACTAATACAAAAACAAAACTAAGGAAGCAGCCTAGGGT
AACCCACACACCCTAGGCCATCTATTTATGTTAATATTTCGATAATTCCC
TGTCCCAAACCAAATAATTAATAATTAAATCAAATCAAACACACAATAGA
TAATAGGCAACATTCTACATGTACCATAAATGCTCCTCTCCAAAAAAAAA
AAAATGCTAATTTATCTTCCATATTTAGGAGTATTTTTTTACCACCGATA
ATGCATCTCTAAAATGTATCTCTATTTGTATGTAGCTCAAATGCCAATTT
CATAAGTTTTCTGACTTTATTTTGTTGCCCCCTGTGCGGCGCGGTACTGC
TGCTGCTGCTGCTGTGCGGCACCACGCCTGCACAGATGCACCAGAAGCGG
ATGAAGCACAAGCACCTCAAGGACGTGATGGCGGTAAGCAAAAGGCATGC
ATGGAACTGGTGCATAAGTAGTGGCCGCCCGGGAAGTTGGGGTTTGGAAC
CGCCAGTAGGGGCTCCCTCCGTGAGTCGTATCAGTGCCTCTTGTGTTGTA
CCTCGCGTCTTGCCATTTCGACATAATCTCGGATCATGCATGCACACCGC
GGCAGCCGCCCGCTCTCTCAGCAAGCAACGATAGAACGTNNNNNNNNNNG
GTTTTCTAGGGCCGCCTTGGTTTGTCCCCCCCTCCTCCCCTTTTCCACAC
ATTCCGGTGTCCGCCCCCCCCCCCCCCCCCCCCCCCCCTCCCTAGAGTCT
TTCGCTGCAGCACCCCCCGTGATTATGTGGGGCGTAGGTAGCTTCATGGC
ATATCTCTGCTTCGCTTTTTCTGGCTTCCTTTGATTTTTCTTCATGTACA
GCAAAGTAGTGTTTTTTTTTAGTGATTGTTTTTTTTTAACCTTTTTTTTT
CTTTTTTTTTTTTTTTTCTTCACATTTTTTTTTTATGCTCGATGGGCTCC
TTGCCACGAGGGCATCTTGCCAGATGAGTACTGAACCGTGGTCACAACAG
AAGGGTCCCTTCTCCCGAGGGCGGCCCCCTCTCCCCCCTTCTGCGGTGCT
TGCCTAAGTTTTTTAATGGATGTATACTGTTGTAGACAGTCCCGTTGACA
GTCCCGTTGACAGTCCCCACTCCCCCCTTCTGCGGTGCTTGCCTAAGTTT
TTTAATGGATGTATACAAATGTCAGCAGTCTACATATGTCCAGCCTGCGA
AGCAGTCGTTCCAGAGGGACTGATACTGTTGTAGACAGTCCCGTTGAACT
AATGTAATACAAATGTCAGCAGTCTACATACGTCTAGCCTGCGAAGAAGT
CGTTCCAGAGGGACTGATACTGTTGTAGACAGTCCCGTTGACAGTCCCGC
CACCCGGCCTCTTGTAAGTAATGTTACAAATGTCAGCAGTCTACATACGT
CCAGCCTGCGAAGACGTCGTTCCGGAAGGGACTGCTGTAGGCATGTATAT
ATGTGTATGTATGTTGTCTTCACATTAAAAACCGTTACGATCTCTCCATC
CTGTACCTCTCAATGTCCGTACTAATCCAACACTTGATTGCGGTCAATTC
CCATGGTCACAGGCTAACTTATACCCAAGAAAAGGTACACGAAGGCATGC
TAACCCCCTTTTCCCCCATCCAAGGGAATTACCGTAGGTGACATAAGACA
AGACACCCCCTGGACCGATTTTGAAAGCCCAAGTACTCCACAGCAAGCAG
GGTGTCAGTCCAGAAAAGGGCGGCGTTGGAAAGATCTCGTCGAGAGCTTT
CCGACAATGTGGCGTTCGTGGTTAGAATCGTAACCGTTGCGGAGTAACCA
AGCTTTCAATATCGGTCCAGGGGGTGTCTTATCTTATGTCATAGTAATAT
ACGGGGCCGAGACCGCTAGAGATAGACGCAATTTTCATATTGTAGTCTTG
TTGGAAATCTATAATATCTAAAAGGAAAGCCGTCGCTATGTACCGTAGGT
GACACAAGATACCACCCCCCACTGGACCGAACTTTAGAGCTCCATTACTC
CGCAACGAAGAGGGCAATGCCAGCTTGCACCAAACGACACATTTTCGGAC
AGCCCTCGACTAGATCTTTTCAACGCCACCCCCTTTCGGCTCTATTTAGC
ACTCTTCTTCTTGCTGGGGAGGAATTAATCGAGCTTCGAAAATCTGTCCA
AGGGGGGTGGTATCTTGTGTAACCTACGATGTCTGTACCTCTGCGATGTA
CGTACTTCTACAATATGGGTAACGATAAAGTCGGGAAGGAACATGTATTT
GTGATGGCATATTGTAATACTTTCATGTTGAAATTTAGCGTTCGGTAGAT
TACTATATGTGTATGTTTTTAAGCATCAAGTATGACGCATTTATGGTGAA
GGGAATTGGTTGGATCTATCTGCAGTTGTCGGAGGGCAAACGAAATAATA
ATAATATGCGCCCATAGTAAATATATATATATATATTGAGCATACCGTAG
GTGGTAGGTGACAACAAGATATCACACCCCCTGGACGGTATTTTGGAATT
TTCAAAGCTCGATTTCGATTTCCTCCCCAGCAAGAAGAAGAGAGTGCTAT
GTAGTGCCGAAAGGGGGTGGCGTTGGAAATATGTATGTAGTCCAGGGCTG
TCCTAAAAAGTGTCGTTTGGTATGCCGGCACACTTTTCGTTACGGGGTAG
TTAATGGCACACTTTTCGTTACGGGGTAGTTAATGGAGCTCTTAAAGTCG
GTGCATGGGGTGTGGTATCTTCTTGCACCCTTCATTTAACATTACTATTT
TTGTTTTTCCTACTCCCAGTATTGGCTTATTCGTCGTCTGCCCCACTGGT
CCCCTTCGTCCACTACGACTAGCTAGACGACCCAACCGGGGCAACACAGG
GGGGGGGGGGGGGGGGGGGGCCCCCCTTTGGCGGGCCTGCCTGGGGGTGT
TTTTTTGGCGGCCAGGGGTGGGGCCCCCCCCCCCCCNNNNNNNNNTCTCG
CCCCCTGGGCCCCCTCCGCCCATTCCAACTGGCAAACCCCCCCACCGGGG
GAAACAGGGGGGGGGGGGGGGTGGACCCCCTCTTGCGGTGCCTGCCTGTG
GTGTTTTTATCGCGAGCAAGGGTTGAGTCACTCCCCACCCTCGTCAACAC
TGCAGCAACATGGTTCAAACTCTGTGTTTACCCGAAAATTGTCAAAATAA
AATAAAATTAAAAAGTAAATACCGTTCCTCTTTTTTTTTGTTTTTTTTGT
TTCTTGCAGCTCGAGAATCGATCCCTGGCCCTGTCGGCAGAGTTCGAAGG
CACCATCTTGGACTACTCGAGGATGAATGTGAGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig11116:879..6212+

>mRNA_L-elsbetiae_contig11116.1001.1 ID=mRNA_L-elsbetiae_contig11116.1001.1|Name=mRNA_L-elsbetiae_contig11116.1001.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=480bp|location=Sequence derived from alignment at L-elsbetiae_contig11116:879..6212+ (Laminarionema elsbetiae ELsaHSoW15)
GGCCATGAAGACCAAGCGGAGGAGACGCTCCTGAAGCTCATCAGAGATCC
CTACAACCTGTCCGATGCCTCGCTGCCGGACACCGCCTCGGACACGGCGG
AATGGCGGCGTTTGGAGGGCCATGAAGACCAAGCGGAGGAGACGCTCCTG
AAGCTCATCAGAGATCCCTACAACCTGTCCGATGCCTCGCTGCCGGACAC
CGCCTCGGACACGGCGGAATGGCGGCGTTTGGAGATGCACCAGAAGCGGA
TGAAGCACAAGCACCTCAAGGACGTGATGGCGATGCACCAGAAGCGGATG
AAGCACAAGCACCTCAAGGACGTGATGGCGCTCGAGAATCGATCCCTGGC
CCTGTCGGCAGAGTTCGAAGGCACCATCTTGGACTACTCGAGGATGAATG
TGAGCCTCGAGAATCGATCCCTGGCCCTGTCGGCAGAGTTCGAAGGCACC
ATCTTGGACTACTCGAGGATGAATGTGAGC
back to top