mRNA_L-elsbetiae_contig1111.996.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1111.996.1
Unique NamemRNA_L-elsbetiae_contig1111.996.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: D7FLU2_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU2_ECTSI)

HSP 1 Score: 313 bits (803), Expect = 3.900e-101
Identity = 230/341 (67.45%), Postives = 253/341 (74.19%), Query Frame = 2 
Query:   80 MGDSESIEEVRTRHKKEVKALDGAARKLIKQANKNXXXXXXXXXXXXXXXXXXXXXHHRELDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEKTNTAARPGMAADGXXXXXXVAGSN----DAVDMIGEAVGAMSVEEREKQKRDQXXXXXXXXXXXXXXXXXXXX----ERIAKEKAEGGPDPRVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGRREGFTEESYPLMRKEAARQLRSSPSEYLPFLDGLAEGQEFDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPPLLLGQEYEGAPLLLTYHEHYYALGAHYNSVVPA 1078
            M  SES++EV+ RHKKE+KALDG  RKLIKQANKNXXXXXXXXXXXXXXXXXXXXX     +E                               + + +AA+       XXXXXX           VD + + VGAMSV          XXXXXXXXXXXXXXXXXXXX    +RIAKEK EGGPDPR+VEM+VL+TQVAPRGFRVSEIKADGHCLYRAVA+QL LTGRR G TEESYPLMR+EAAR+LRSSPSEYLPFLDGL EG+EFD+YC  VEGSAEWGGQVELQALC+AL VPMEVFSAMSPPLLLGQ Y+G PLLLTYHEHYYALG+HYNSVVPA
Sbjct:    1 MAGSESVDEVKARHKKEIKALDGTGRKLIKQANKNXXXXXXXXXXXXXXXXXXXXXXXXXXEEATEAAAGDGDVD-------------------DASESAAKSXXXXXXXXXXXXXXXXXXXXXSEVDGVADGVGAMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRIAKEKEEGGPDPRIVEMDVLKTQVAPRGFRVSEIKADGHCLYRAVADQLSLTGRRPGLTEESYPLMRQEAARELRSSPSEYLPFLDGLEEGEEFDKYCVKVEGSAEWGGQVELQALCSALRVPMEVFSAMSPPLLLGQGYDGPPLLLTYHEHYYALGSHYNSVVPA 322
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: A0A7S4B021_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B021_CHRCT)

HSP 1 Score: 157 bits (396), Expect = 3.950e-40
Identity = 80/166 (48.19%), Postives = 106/166 (63.86%), Query Frame = 2 
Query:  575 ERIAKEKAEGGPDPRVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGRREGFTEESYPLMRKEAARQLRSSPSEYLPFLDGLAEGQEFDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPPLLLGQEYEGAPLLLTYHEHYYALGAHYNSVV 1072
            +RIA+EKA  GP  R VE E L  ++ P G  V E+ ADGHCLYR+VA+QL  +G    F +      R+ AA  +R+ P +++P+L G A     D YC+ VE S+EWGGQ+E+ AL  A    + V+SA  PPLL G++Y GAPL L YH HY+ LG HYNS+V
Sbjct:  205 KRIAEEKAASGPSARAVETERLMAKLEPLGLAVQEVPADGHCLYRSVADQLQRSGDAADFQQ-----CRRLAAEYIRTHPDDFMPYLPGEAGATTIDAYCAQVESSSEWGGQLEITALSHACRRCVAVYSADGPPLLTGEQYAGAPLTLAYHRHYFGLGEHYNSLV 365
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: A0A835Z5X2_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X2_9STRA)

HSP 1 Score: 153 bits (386), Expect = 3.770e-39
Identity = 82/171 (47.95%), Postives = 114/171 (66.67%), Query Frame = 2 
Query:  593 KAEGGPDPRVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGR------REGFTEESYPLMRKEAARQLRSSPSEYLPFLDGLAEGQEFDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSP-PLLLGQEYEG---APLLLTYHEHYYALGAHYNSVVP 1075
            +A  GPD R VE+E L   + PRG  V+ I++DG+CLYRAVA QL +              E+ +  +R+ AA  LR   +E++PF++   EG  ++ YC+ VEGSAEWGG+VEL+AL  AL VP+EV+SA +  P+++G+  EG   APL ++YH+HYYALG HYNSVVP
Sbjct:  150 RAAAGPDARTVELEALSANLLPRGLAVAPIRSDGNCLYRAVAHQLAVAAHGGDGAAAAAAAEDGHAGLRRVAAAHLREHAAEFMPFVEACDEGA-YEAYCALVEGSAEWGGEVELRALSRALRVPIEVWSAAAAQPMVVGEGEEGGAAAPLRVSYHQHYYALGEHYNSVVP 319
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: A0A7S0I6F7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6F7_9EUKA)

HSP 1 Score: 147 bits (371), Expect = 1.020e-38
Identity = 84/170 (49.41%), Postives = 111/170 (65.29%), Query Frame = 2 
Query:  575 ERIAKEKAEGGPDPRVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGRREGFTEESYPLMRKEAARQLRSSPSEYLPFLDGLAEGQEFDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPPLLLGQEY--EGAPLLLTYHEHYYALGAHYNSVVPA 1078
            +R+A EKA  GP  R +EM  L+ Q+ P G +++EI ADGHCLYRAVA+QL   G  EG  EE Y   R+ AA  +RS P +++P++   AEG +   Y   VEGS EWGGQ+E+ AL  A    + VFSA++P L+ G+EY   G  L L YH+HYY LG HYN+VVP+
Sbjct:   11 QRMADEKAGAGPSQRELEMAQLEQQLQPLGRQIAEIAADGHCLYRAVAQQLMQHGS-EGV-EEDYSGCRRLAAAYMRSHPGDFMPYV--AAEGMDMGTYTQQVEGSNEWGGQLEITALAHARKRTIAVFSAVAPLLVTGEEYADNGPRLELCYHKHYYGLGEHYNAVVPS 176
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: A0A7S0L9G8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L9G8_9EUKA)

HSP 1 Score: 144 bits (363), Expect = 4.560e-36
Identity = 80/172 (46.51%), Postives = 112/172 (65.12%), Query Frame = 2 
Query:  578 RIAKEKAEGGPDPRVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGRREGFTEESYPLMRKEAARQLRSSPSEYLPFLD---GLAEGQEFDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPPLLLGQEYE--GAPLLLTYHEHYYALGAHYNSVVPA 1078
            RIA+EKA  GP  R +EM+ L  ++ P G +V EI ADGHCLYR++A Q+ L G+  G    S+   R++A+  +R++PS++LP+L    G A  Q  D+YC ++E S+EWGGQ+E+ AL       + V SA +P LL G++Y+  G  L L YH HYY LG HYNS+VPA
Sbjct:  128 RIAEEKAAAGPSARDIEMQKLVVKLMPLGLQVQEIPADGHCLYRSLAHQMQLDGQ-SGI---SFQHCRRDASAYIRANPSDFLPYLAADAGDASEQSLDKYCGTIEASSEWGGQLEITALAHFHKRCIAVHSADAPVLLTGEDYDANGPRLQLAYHRHYYELGEHYNSLVPA 295
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: W7U3S7_9STRA (Ovarian tumor, otubain n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3S7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.200e-35
Identity = 75/157 (47.77%), Postives = 105/157 (66.88%), Query Frame = 2 
Query:  617 RVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGRREGFTEESYPLMRKEAARQLRSSPSEYLPFLDGLAEGQE--FDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPPLLLGQE-YEGA-PLLLTYHEHYYALGAHYNSVVP 1075
            R +EM  + + ++P G RV E+ ADGHCLYRAVA QL      +G   + YP +R+ AA+ + S P ++LPFL G  EG+    + Y  +VE +AEWGG++E++ALC A   P+ V++A  P  ++G E Y+ A PLLL+YH H+YALG HYNSVVP
Sbjct:  101 RDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQL----EHQGIPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEGAGLEAYVHTVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPVYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVP 253
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: A0A4D9CYR4_9STRA (OTU domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYR4_9STRA)

HSP 1 Score: 142 bits (357), Expect = 6.900e-35
Identity = 75/157 (47.77%), Postives = 105/157 (66.88%), Query Frame = 2 
Query:  617 RVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGRREGFTEESYPLMRKEAARQLRSSPSEYLPFLDGLAEGQE--FDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPPLLLGQE-YEGA-PLLLTYHEHYYALGAHYNSVVP 1075
            R +EM  + + ++P G RV E+ ADGHCLYRAVA QL      +G   + YP +R+ AA+ + S P ++LPFL G  EG+    + Y  +VE +AEWGG++E++ALC A   P+ V++A  P  ++G E Y+ A PLLL+YH H+YALG HYNSVVP
Sbjct:  174 RDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQL----EHQGIPSQGYPEVRRSAAQHILSHPEDFLPFLAGGEEGEGAGLEAYVHAVEDTAEWGGELEIRALCHAYQTPIRVYAAEQPIYMIGAEDYDQAKPLLLSYHRHFYALGEHYNSVVP 326
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: A0A2R5H1E0_9STRA (OTU domain-containing protein 6B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H1E0_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.580e-34
Identity = 73/174 (41.95%), Postives = 114/174 (65.52%), Query Frame = 2 
Query:  575 ERIAKEKAEGGPDPRVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGRRE-GFTEESYPLMRKEAARQLRSSPSEYLPFLDGLAEGQE-----FDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPPLLLGQEYEGAPLLLTYHEHYYALGAHYNSVVPA 1078
            ER A+ KA+ GP  R  EME +  ++  +GF + E++ADGHCLYRAVA+QL    +   G ++E + L+R   A+ +R+    + PF+    EG E     F++Y  +V+ SAEWGGQ+EL+AL  AL  P+EV++A  P +++G+++ G PL +++H+H+  LG HYNSV P+
Sbjct:  145 ERFAERKAQAGPSRRDREMETISAKLLGKGFALKEVEADGHCLYRAVADQLIQKKQTSVGESKEPHKLLRTMCAQYMRTHRPLFEPFIALDDEGGEQGAHSFEEYLDTVQNSAEWGGQLELRALAGALQTPIEVYAADGPMVIMGEDFTGEPLRVSFHQHFLTLGEHYNSVQPS 318
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: A0A7S0NT02_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NT02_9EUKA)

HSP 1 Score: 139 bits (349), Expect = 3.840e-34
Identity = 76/166 (45.78%), Postives = 105/166 (63.25%), Query Frame = 2 
Query:  575 ERIAKEKAEGGPDPRVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGRREGFTEESYPLMRKEAARQLRSSPSEYLPFL-----DGLAEGQEFDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPPLLLGQEYE--GAPLLLTYHEHYYALG 1051
            ERIA  K+  GP  R VEME L  ++AP G RV EI ADGHCLYR++A+Q+    +R G    ++   R++AA  +RS P+++LP+L     +G+A+ Q  D+YC  +EG AEWGGQ+E+ AL       + V +A +P LL G+EY+  G  L L YH HYY LG
Sbjct:  133 ERIATHKSAAGPSAREVEMEALMAKLAPLGLRVLEIPADGHCLYRSLADQM----QRHGEQTATFQHCRRDAAGYIRSHPADFLPYLVAEGAEGVADAQSVDEYCDVIEGKAEWGGQLEITALSHFHKRCIAVHTAHAPVLLTGEEYDCHGPRLQLAYHHHYYELG 294
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BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Match: W4FCW5_9STRA (OTU domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCW5_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.500e-33
Identity = 72/162 (44.44%), Postives = 105/162 (64.81%), Query Frame = 2 
Query:  617 RVVEMEVLQTQVAPRGFRVSEIKADGHCLYRAVAEQLGLTGRREGFTEESYPLMRKEAARQLRSSPSEYLPFLD-----GLAEGQEFDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPPLLLGQEY---EGAPLLLTYHEHYYALGAHYNSVVPA 1078
            R +E + +  Q+   G  V EI +DGHC+Y AVA+QL LT R    + ++Y  +R++ A  LRS   +++PF++      +A   +F+ YC+ VE +A+WGGQVEL+AL  AL VP+EV+SA S  L++G EY   +  PL L+YH HYY LG H+NS+V A
Sbjct:  125 RQIESDAIAAQLTSLGLIVKEIPSDGHCMYHAVADQLKLTRRLPFPSSDAYIPLRQKTAAYLRSHADDFVPFVELDYASDIAIQDQFESYCARVEATADWGGQVELRALAQALAVPIEVYSASSSVLVMGDEYHREDQPPLRLSYHLHYYTLGEHFNSIVYA 286
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1111.996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLU2_ECTSI3.900e-10167.45OTU domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S4B021_CHRCT3.950e-4048.19Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A835Z5X2_9STRA3.770e-3947.95OTU domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S0I6F7_9EUKA1.020e-3849.41Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0L9G8_9EUKA4.560e-3646.51Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
W7U3S7_9STRA1.200e-3547.77Ovarian tumor, otubain n=1 Tax=Nannochloropsis gad... [more]
A0A4D9CYR4_9STRA6.900e-3547.77OTU domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A2R5H1E0_9STRA1.580e-3441.95OTU domain-containing protein 6B n=1 Tax=Hondaea f... [more]
A0A7S0NT02_9EUKA3.840e-3445.78Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
W4FCW5_9STRA1.500e-3344.44OTU domain-containing protein n=2 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1111contigL-elsbetiae_contig1111:9925..15641 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score316.6
Seed ortholog evalue1.4e-83
Seed eggNOG ortholog2880.D7FLU2
Preferred nameOTUD6B
KEGG koko:K14015,ko:K18342
KEGG Pathwayko04141,map04141
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006417,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008283,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016579,GO:0016787,GO:0017148,GO:0019222,GO:0019538,GO:0019783,GO:0019941,GO:0022607,GO:0030163,GO:0030433,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0033554,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034976,GO:0035523,GO:0035871,GO:0036211,GO:0036459,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043248,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0045727,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051603,GO:0051716,GO:0060255,GO:0065003,GO:0065007,GO:0070011,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0101005,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1990167,GO:1990168,GO:2000112,GO:2000113
EggNOG free text desc.protein K27-linked deubiquitination
EggNOG OGsCOG5539@1,KOG2606@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04121
Ec32 ortholog descriptionOvarian tumour, otubain
Ec32 orthologEc-26_001250.1
Exons7
Model size1337
Cds size1002
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815325.1067266-UTR-L-elsbetiae_contig1111:9924..101801622815325.1067266-UTR-L-elsbetiae_contig1111:9924..10180Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1111 9925..10180 -
1691682839.771004-UTR-L-elsbetiae_contig1111:9924..101801691682839.771004-UTR-L-elsbetiae_contig1111:9924..10180Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1111 9925..10180 -
1622815325.2054334-UTR-L-elsbetiae_contig1111:15562..156411622815325.2054334-UTR-L-elsbetiae_contig1111:15562..15641Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1111 15563..15641 -
1691682839.8467338-UTR-L-elsbetiae_contig1111:15562..156411691682839.8467338-UTR-L-elsbetiae_contig1111:15562..15641Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1111 15563..15641 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815325.1201239-CDS-L-elsbetiae_contig1111:10180..103391622815325.1201239-CDS-L-elsbetiae_contig1111:10180..10339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 10181..10339 -
1691682839.7844977-CDS-L-elsbetiae_contig1111:10180..103391691682839.7844977-CDS-L-elsbetiae_contig1111:10180..10339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 10181..10339 -
1622815325.1356363-CDS-L-elsbetiae_contig1111:10884..110111622815325.1356363-CDS-L-elsbetiae_contig1111:10884..11011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 10885..11011 -
1691682839.7975965-CDS-L-elsbetiae_contig1111:10884..110111691682839.7975965-CDS-L-elsbetiae_contig1111:10884..11011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 10885..11011 -
1622815325.1481774-CDS-L-elsbetiae_contig1111:11649..117821622815325.1481774-CDS-L-elsbetiae_contig1111:11649..11782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 11650..11782 -
1691682839.806014-CDS-L-elsbetiae_contig1111:11649..117821691682839.806014-CDS-L-elsbetiae_contig1111:11649..11782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 11650..11782 -
1622815325.1590338-CDS-L-elsbetiae_contig1111:12206..123091622815325.1590338-CDS-L-elsbetiae_contig1111:12206..12309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 12207..12309 -
1691682839.8143153-CDS-L-elsbetiae_contig1111:12206..123091691682839.8143153-CDS-L-elsbetiae_contig1111:12206..12309Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 12207..12309 -
1622815325.174073-CDS-L-elsbetiae_contig1111:12999..133351622815325.174073-CDS-L-elsbetiae_contig1111:12999..13335Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 13000..13335 -
1691682839.822407-CDS-L-elsbetiae_contig1111:12999..133351691682839.822407-CDS-L-elsbetiae_contig1111:12999..13335Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 13000..13335 -
1622815325.1860287-CDS-L-elsbetiae_contig1111:14567..146961622815325.1860287-CDS-L-elsbetiae_contig1111:14567..14696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 14568..14696 -
1691682839.8304322-CDS-L-elsbetiae_contig1111:14567..146961691682839.8304322-CDS-L-elsbetiae_contig1111:14567..14696Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 14568..14696 -
1622815325.1950736-CDS-L-elsbetiae_contig1111:15547..155621622815325.1950736-CDS-L-elsbetiae_contig1111:15547..15562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 15548..15562 -
1691682839.838391-CDS-L-elsbetiae_contig1111:15547..155621691682839.838391-CDS-L-elsbetiae_contig1111:15547..15562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1111 15548..15562 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1111.996.1prot_L-elsbetiae_contig1111.996.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1111 10181..15562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1111.996.1

>prot_L-elsbetiae_contig1111.996.1 ID=prot_L-elsbetiae_contig1111.996.1|Name=mRNA_L-elsbetiae_contig1111.996.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=334bp
MGDSESIEEVRTRHKKEVKALDGAARKLIKQANKNKKKVAEAEAKIAEME
VETRARHHRELDEAVAAAAAAGSGGGDGGASESTTTPTSSASAGEKTNTA
ARPGMAADGGGGGGGVAGSNDAVDMIGEAVGAMSVEEREKQKRDQKRAKA
QRKREKQREKEVEREERIAKEKAEGGPDPRVVEMEVLQTQVAPRGFRVSE
IKADGHCLYRAVAEQLGLTGRREGFTEESYPLMRKEAARQLRSSPSEYLP
FLDGLAEGQEFDQYCSSVEGSAEWGGQVELQALCAALGVPMEVFSAMSPP
LLLGQEYEGAPLLLTYHEHYYALGAHYNSVVPA*
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mRNA from alignment at L-elsbetiae_contig1111:9925..15641-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1111.996.1 ID=mRNA_L-elsbetiae_contig1111.996.1|Name=mRNA_L-elsbetiae_contig1111.996.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5717bp|location=Sequence derived from alignment at L-elsbetiae_contig1111:9925..15641- (Laminarionema elsbetiae ELsaHSoW15)
GTTCCGTGCATACAGGTCTGAGGAAGAGGCAGCAGCTTACTCAGGCAGGT
GCGGGGTGGTGTGGGCTTCCAAGATCAAGATGGGCGATTCTGAGGTCGGT
GAATATTGATGGACGATCGAACTTTTGTCAGGGATGTCAGTTATGCAGCA
AATCGACTCCCACGGCTGCCTACATACATACGTACAGCATACAAACGCAG
CAGCACTTGCATCTGGAGAAGAGATCGCTGCACACCTCAAGGTTTGGCAC
ATGCTCATCGCCAAGCAGCATTTATTAAGCCCAAACGTTCATGTCGCCTT
TGGTCAACGAGCTTGGTATATATTGTATAGTCTATATATGGTGTGAAGCA
AGGCGCACGTTTCATGCGGTTTGACCGGAGAGAGAGGGTTAGACTAGCAC
TGGCAAGCAACACAGATGTAGACTAGACTAGATATGTCTTGAGCCGGACC
TGCTTTGCAATATATGCACACTTGCAGGTTTTCTCCGTCCGACTTGTGCA
CCAGATTGCATACCATCTCGTAGTTCGAGGCGAGACGAGACTGCTTCAAT
TGTCAAACATGACGAGTGCATCTGCGGACATGCGGCCGCGTGGAACATAC
GAGCATTGTACAAAATATTCGCACCCAAACATCGTAGGCGTTATATATAC
GTTGGCCTCGAAACTGTTGCTGTTGCTGTTGCTGGTGATGTGTATTGTTG
CACCACGCTAGTTTGTGTAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCCCTCTCTCGTCATGGCCCTGTGTTGACAACAATACACAGTAC
TGCTGTGTTGTGGCCCACACCGATCGATATATCACACCGTTGTATCACGT
AGAAAAGGCCGCACGACGGCGAGCAAAGAGGCATTTATCTAAGCATCGGT
AGCGGCGCTTTTCGTGTCTGCTCTGCCCGTTTCCAAAACCACCAGAGCAT
CGAGGAGGTGAGGACGAGGCACAAGAAGGAGGTCAAGGCGCTCGACGGCG
CTGCCAGGAAGCTCATCAAGCAGGCCAACAAGAACAAGAAGAAGGTCGCG
GAGGCGGAGGCGAAGATCGCCGAGGTGGGCGGGAACCAGGAACGGTCGCC
CCGGTCGCTTGCCGGCCTAGTCCGGTCGCCGATGCCGACCGACGACGCCC
CTCTCGCCGACAGCAGTGCTTGCTGTTTCGGAAGCAGTTCCTCGCGTTTT
TATCATGTTGATTTTTTTTTGTTGATTTTTTTTTGTTGATTTTTTACCGC
TGATATGTATCTGTCACGCCGAACGACGACGCCTCTCTCGTCGACAGCAG
TGCTTGCTGTTTCGGAAGCAGTTCCTCGTGTATTTATATGTTGATTTTTT
ACCGCTGGTATGTATCTGTCAGCGGGGGGTCTGGCACGCATGGTCTGCCA
CCTACCGTAGGTGACACAAGATACCACACCCCCTGGACAGATTTTCAAAG
CTCGATTCCTCTCCAGCAAGAAGAGTGCCAATGCCGAAAAGGGGTGCGTC
GGAAATATCTAGGCGAGGGCTGTCCGAAAATGTGCCGTTTGGTGCTGGCA
CCTTCTTCGTTATGGAGTAATGGAGCTCTAAAATTCGGCCCAGGGGGTGT
GGTATCTTGTGTCACCTACGGTAAACGGGTTGTAGTAGGTTCATATGTGG
GTGCCCGGAAAGCTCTCGACCGACGCGGGCTCGAAACGGACTACTACATA
GACGTCAGCCATCGAAGCCCAGCCTGTGAAAGATATATTCCCAGGCGGGC
TGAAGTGGTGTAGTAGACCCAATAACCATCCTTTCCTATATACACAATAA
CACCCAGCCCAGTGGCACAATGGGACCAAAGTCGGCAATCTGCCATGTTG
CTTGTATTTTTTTGGGGGTGTTGTGGCAGGCCTTGCGCGCGCACAACCAC
GGATAGCCACCACGAACGCGAGATTACAAGCTTCCGTTGTCGTGTTCTTT
GTTGATCGGAATCTTGCTGCATGTGGTCGATTTCGATTTCATCCTCCAGG
CAAAGAGGGGCATGTTGCGCGTGTTGATACTCCGACGTTTTGGAGCGGGA
GGGGCGGTTGGCACAAGTATGTTAGCCGTAAAGCACGCAGACAGCAGCAC
GCACCAAGCACGCATACATAACCTTGAAACCCCTGTGCCGCTGTACGAAG
TACGCCCCTTTGACTCACCCGTGCGAATTTAAGGTTTTGCTGGCTCTTCT
CCTCCCCAAGCAGGAGCAGCAGGCAGTAGAGAGCGTGGTTCTGAAAATGG
CTTGATTGCCTTGCGACGCGCGTCCTACGCTTACGCACTGCGGCTTGTAA
AAGCAGATGGAAGTCGAGACGAGAGCCCGACATCACCGAGAGCTAGACGA
GGCTGTTGCTGCTGCTGCTGCTGCTGGCAGTGGTGGCGGTGATGGTGGTG
CTTCAGAGTCGACGACAACACCGACATCCTCTGCCTCAGCCGGAGAGAAA
ACGAACACTGCCGCCAGACCTGGGATGGCAGCCGATGGCGGCGGCGGCGG
CGGCGGCGTCGCAGGGAGCAACGACGCCGTCGATATGATAGGCGAAGCTG
TGGGAGCTATGTCCGTGGAGGAGAGAGAGAAGCAAAAGAGAGATCAGAAA
AGGGCCAAGGCTCAGCGCAAGCGCGAGAAACAGAGGGAAAAGGTGACAAC
CAGCCGCGTTGCCTGTGTACATATATATATATATTTATTTATTTTAACCA
GATTGAATCTCACAGAGTCTCGTCTCAATGTGGATCAGGTTCCATTTTTG
ATTTAACTGCTGTTTTTCTCTCTAAATTCGTGCAGCACAGGTGTTTTTGT
AGGGTCACACGTATGTATGAAGACCCCCCCCCCGTAATTTTTAGATGATG
TGCAGGCGAAATCAAAAGCCTTGGACCTGGTTAGTATGTAAGAGGGGGAT
AAAAGGCCCGGCAAGGCTGCCACCTACCGACTACGTACATGCGAATATTT
GTTTTTGTTTCAAATGTTGACGGAAAGTGTCAGCGCACATATGTAGTATA
TACCAGTATTGCAATTGCAGTATTGTGGTAGGCGTTTTTGTTTTGCTCAG
GGCCGGAATCCGATAAAACAGCCGCGTCCTGCGCCACTCTTATGTACGTG
CATGCGAATATTTGTTTTTGTTTCAAGTGTTGACGCAAAAGTATCACACA
CATACATACATAGTTACCAGTATTGCGCATAGGCGTTTGTTCGTTTAAGG
CCGGACTCCAACCAACAGCCGCACCTGCGCCGGCCACTCTTGCGCCATCC
AATCATTTAGCCTACCCTTGACGCATCGACTGGAATGGGTCCTGTCGGAT
GAACCAACTGTCGGGGTCGGGCGCACTGGCAGGAGGTCGAGAGAGAGGAG
CGCATCGCCAAGGAGAAGGCAGAGGGGGGTCCCGACCCAAGGGTCGTCGA
GATGGAAGTTCTACAGACCCAGGTTGCCCCGCGAGGTGGGTGCACATTGC
CTTGGATACGGCCACTTGCTTGGTTGCTGTTGTCTGTGGCTGTTGTTGTC
GTGGTTGCTGCTGTTGTGTGTGCGCGTGTGCTTGTGTGTGGTGGTTATGC
ACCAATAACGACGACAGCGGCGGCTCAAGCAGGGGCACGTCTTGTCAGTT
TCCGAAACAGAATTGGCCTTACCGCTTCGCTTGTTTCTCGTGCTGCTCTG
CGCCTCCTTGCGTGCGCGCCGCGGTGTGGTACAACTCGCGGCCGGCTTGT
GTGTACATACTTAACTCACCACGGGAATTGACCGCATCAAGTGTTGGAAT
AGTATGCCCATCGGGAGGTACTGAGTGGAGAGGTCGGAACGGTTTCTTAT
GTGAAGAAACAACAACAACCCGAATCGAGTCGGAACTTATCGGATCGATC
GGTGGGCAGGGTTCCGCGTGAGCGAGATCAAGGCGGACGGGCACTGCCTG
TACAGGGCCGTGGCAGAGCAGCTGGGCCTCACCGGGCGAAGAGAAGGCTT
CACGGAAGAATCCTACCCTCTCATGAGGAAGGAAGCCGCTAGGTGTGTTT
TTTGTTCTTTGTTTTTCCTCCCATTATCGGCTTATTCGTCGTCTACCCCA
CTGGCCCCCTTCCTCCACTACGGCTAGCTAGATGACCCAACCGGGGTCAC
ACAGGAGGGGGGGGGCTACGTGTGTAGATCCCAGAACCTTGCGGAAGGCT
GCTGTCTGATTGAGCCCCGTAAGATGAGCATCGAGCATCGGCTACACTGC
TCGAGCCACGCGCGAGACACAGCAGTGTTCTGCGCTGGTATTTCCTCCCC
TGAGCTCGTAGGCTATGTACGTTGCTGCTCCGCCTGCATGACCATCTGCG
GTTCCACCTTCTTGTTTTGCAGATTGATCTTATCCATATACTTCGTAGCT
GGGGTCGTCTTTTATCCTACAACCCCATTGAAACCTCTCACGATCCGTCT
GTCCCGTACGCGCTAGCCACTGGCCTCGCCAGTTGATGTCTGCGCTTCTG
TCTTGTAACGCTCCCCCAACTCCATACCCGACGCAACAACCCTCACGTAC
GCAACCATTAAAACATGGAAACAACAGTAGAGATGGCAACGCCTCCGTAA
ATACTGCTTTAAAATATTTCACCCTTTTTGACCAAAAAGCTCAACCCTTT
TTGTTCCTTGATCTTCTTGCTGCTGTAAAGACAACTGCGGTCCAGTCCTA
GCGAGTACCTCCCGTTCCTCGACGGCCTGGCGGAGGGGCAGGAGTTCGAC
CAGTACTGCAGCAGCGTGGAGGGGAGCGCCGAGTGGGGAGGGCAGGTGGA
GCTTCAGGTGAGCCGCCGAGGCAATAACCCACGCCACACGTGGTGCGCGT
AGATGTTCGTGAAGGTTCAAGTTATGTGAAGAGGCACCAAGGGGCACAGC
GGGGCCGAGAGCAAGGCCATCTGCGCACGCACGCACCTGGAATAATTCTA
AAGACACACGCGCACGTATGCACGCATAGCCTGGAAGAGAGGAAATTACC
ACATTTGTTTTTTTTGTTTTCTCCCATTATTGGCATATTCGTCGTCTGCC
CCACTGGCCCCCAAACTTCACGACGACTAGCTAGACGGCCCGAAACCGGG
TTCACACGGGAGGGTGGACCCCCTCCTGCGGTGCCTGCCTCAGATGTTTT
TATCGCGAGTGCTGCTGCGGTTCGCGCAGCAGCGCTGTTTTTTGGGCAGC
CGGCCACACGGGTCTCTTTTTGGCCAAAAGGCAAGCTTGCGGGAATGTCA
GACATTTTTGTTTTACCGTCGTAGGTGTTTTTATCCCAATCCTCGGCTCA
GCTCAAAAGCCAACCTGCGTGCCGCCCTTTTCTGCCGACACCCCCCGCCC
AGGCTTTATGCGCCGCGCTGGGGGTCCCGATGGAGGTCTTCTCCGCCATG
TCCCCGCCGCTGCTCTTGGGGCAAGAGTACGAGGGGGCCCCGCTGCTCCT
CACCTACCACGAGCACTACTATGCTCTCGGGGCGCACTACAACTCCGTCG
TACCGGCCTGAAGCGACCAGGCGTCGGTTTTTTGGTTGAGACGGTTTTCC
TTGCCTTCTATTGTTGTTTTGAGAGAGGGTGGGGTGCTGGTGCGGTTGCG
CAGCTGGCTCGTGTTCTGGCGACAGGCTAACAGGCCGCAGTAGTTTTAGC
TGCTGTTTTTTCGATGAAAGAATCGACCACCAGAGACTTCAAAGAAGATA
ATTCAAAGAAGGAGAAGAAATCAATAAATACTGATGTAAATTATCCTGGG
ACGGCGCTTGAGATGGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1111:9925..15641-

>mRNA_L-elsbetiae_contig1111.996.1 ID=mRNA_L-elsbetiae_contig1111.996.1|Name=mRNA_L-elsbetiae_contig1111.996.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2004bp|location=Sequence derived from alignment at L-elsbetiae_contig1111:9925..15641- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGCGATTCTGAGATGGGCGATTCTGAGAGCATCGAGGAGGTGAGGAC
GAGGCACAAGAAGGAGGTCAAGGCGCTCGACGGCGCTGCCAGGAAGCTCA
TCAAGCAGGCCAACAAGAACAAGAAGAAGGTCGCGGAGGCGGAGGCGAAG
ATCGCCGAGAGCATCGAGGAGGTGAGGACGAGGCACAAGAAGGAGGTCAA
GGCGCTCGACGGCGCTGCCAGGAAGCTCATCAAGCAGGCCAACAAGAACA
AGAAGAAGGTCGCGGAGGCGGAGGCGAAGATCGCCGAGATGGAAGTCGAG
ACGAGAGCCCGACATCACCGAGAGCTAGACGAGGCTGTTGCTGCTGCTGC
TGCTGCTGGCAGTGGTGGCGGTGATGGTGGTGCTTCAGAGTCGACGACAA
CACCGACATCCTCTGCCTCAGCCGGAGAGAAAACGAACACTGCCGCCAGA
CCTGGGATGGCAGCCGATGGCGGCGGCGGCGGCGGCGGCGTCGCAGGGAG
CAACGACGCCGTCGATATGATAGGCGAAGCTGTGGGAGCTATGTCCGTGG
AGGAGAGAGAGAAGCAAAAGAGAGATCAGAAAAGGGCCAAGGCTCAGCGC
AAGCGCGAGAAACAGAGGGAAAAGATGGAAGTCGAGACGAGAGCCCGACA
TCACCGAGAGCTAGACGAGGCTGTTGCTGCTGCTGCTGCTGCTGGCAGTG
GTGGCGGTGATGGTGGTGCTTCAGAGTCGACGACAACACCGACATCCTCT
GCCTCAGCCGGAGAGAAAACGAACACTGCCGCCAGACCTGGGATGGCAGC
CGATGGCGGCGGCGGCGGCGGCGGCGTCGCAGGGAGCAACGACGCCGTCG
ATATGATAGGCGAAGCTGTGGGAGCTATGTCCGTGGAGGAGAGAGAGAAG
CAAAAGAGAGATCAGAAAAGGGCCAAGGCTCAGCGCAAGCGCGAGAAACA
GAGGGAAAAGGAGGTCGAGAGAGAGGAGCGCATCGCCAAGGAGAAGGCAG
AGGGGGGTCCCGACCCAAGGGTCGTCGAGATGGAAGTTCTACAGACCCAG
GTTGCCCCGCGAGGAGGTCGAGAGAGAGGAGCGCATCGCCAAGGAGAAGG
CAGAGGGGGGTCCCGACCCAAGGGTCGTCGAGATGGAAGTTCTACAGACC
CAGGTTGCCCCGCGAGGGTTCCGCGTGAGCGAGATCAAGGCGGACGGGCA
CTGCCTGTACAGGGCCGTGGCAGAGCAGCTGGGCCTCACCGGGCGAAGAG
AAGGCTTCACGGAAGAATCCTACCCTCTCATGAGGAAGGAAGCCGCTAGG
GTTCCGCGTGAGCGAGATCAAGGCGGACGGGCACTGCCTGTACAGGGCCG
TGGCAGAGCAGCTGGGCCTCACCGGGCGAAGAGAAGGCTTCACGGAAGAA
TCCTACCCTCTCATGAGGAAGGAAGCCGCTAGACAACTGCGGTCCAGTCC
TAGCGAGTACCTCCCGTTCCTCGACGGCCTGGCGGAGGGGCAGGAGTTCG
ACCAGTACTGCAGCAGCGTGGAGGGGAGCGCCGAGTGGGGAGGGCAGGTG
GAGCTTCAGACAACTGCGGTCCAGTCCTAGCGAGTACCTCCCGTTCCTCG
ACGGCCTGGCGGAGGGGCAGGAGTTCGACCAGTACTGCAGCAGCGTGGAG
GGGAGCGCCGAGTGGGGAGGGCAGGTGGAGCTTCAGGCTTTATGCGCCGC
GCTGGGGGTCCCGATGGAGGTCTTCTCCGCCATGTCCCCGCCGCTGCTCT
TGGGGCAAGAGTACGAGGGGGCCCCGCTGCTCCTCACCTACCACGAGCAC
TACTATGCTCTCGGGGCGCACTACAACTCCGTCGTACCGGCCTGAGCTTT
ATGCGCCGCGCTGGGGGTCCCGATGGAGGTCTTCTCCGCCATGTCCCCGC
CGCTGCTCTTGGGGCAAGAGTACGAGGGGGCCCCGCTGCTCCTCACCTAC
CACGAGCACTACTATGCTCTCGGGGCGCACTACAACTCCGTCGTACCGGC
CTGA
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