mRNA_L-elsbetiae_contig1109.977.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1109.977.1
Unique NamemRNA_L-elsbetiae_contig1109.977.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: A0A6H5JQE4_9PHAE (DUF775 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQE4_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 1.040e-88
Identity = 141/172 (81.98%), Postives = 151/172 (87.79%), Query Frame = 2 
Query:  815 PLHPVFRAIDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSAS-GTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNFMLK 1327
            P+ P FRAIDSSKCV EI+NPREVDE+VFFLLP SPVPPG  AVLYFS PSA+ G FE+WEVLGAL   KPSGVFRT WPTNEQM+S  VVQLGVS+E+ED  TNL L AGGVQDRK FALKIAKDLFQFMSSFSQ+TQAGPE+MVVPTNVLDRWI RFESKYNRDPNFMLK
Sbjct:   17 PVIPEFRAIDSSKCVAEIVNPREVDELVFFLLPTSPVPPGQTAVLYFSVPSATTGAFEHWEVLGALAASKPSGVFRTGWPTNEQMQSCAVVQLGVSIESEDTATNLGLSAGGVQDRKNFALKIAKDLFQFMSSFSQSTQAGPELMVVPTNVLDRWILRFESKYNRDPNFMLK 188
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BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: A0A7S2V1Q5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Q5_9STRA)

HSP 1 Score: 197 bits (501), Expect = 7.710e-56
Identity = 95/171 (55.56%), Postives = 123/171 (71.93%), Query Frame = 2 
Query:  815 PLHPVFRAIDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNFMLK 1327
            P+   FR I  +K V +ILNP+E+ ++ FF LPN  +P G + +LY+S       F+NW VLGAL   KPSGVFRT W TNE ++    +QLGVS+E+ DV+ NL L   GV+DRKQFA KIA DLFQFM+SFSQ++  G E+MV+PTN+LDRW++RFE KY  DPNFM+K
Sbjct:   48 PVQTAFRQILETKFVADILNPQEISDVCFFTLPNFVIPEGFSVILYYSP----APFDNWSVLGALSTAKPSGVFRTGWATNESLRGASHLQLGVSIESVDVMKNLNLDETGVEDRKQFAHKIALDLFQFMASFSQSSSQGGELMVIPTNILDRWMERFEQKYRVDPNFMMK 214
[Close]
BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: K3X1K5_GLOUD (DUF775 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1K5_GLOUD)

HSP 1 Score: 186 bits (471), Expect = 3.980e-51
Identity = 109/249 (43.78%), Postives = 144/249 (57.83%), Query Frame = 2 
Query:  584 NRAHVHWLKATNCR*NADCFTYCLQAVPCTYVLTNLPGSSTTIGV*CHSGQTFPVFCSIPLMMCDSREPRV-ILRSTCPLHPVFRAIDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNFMLK 1327
            N+ H  W         A    YC+    C Y   ++P    T  V   S + F   CS    M +    +  ++ +  P+   FR I     V EI +P  V ++ FFLLPNSPVPPG+ AVLYF+ PS     +NW++LG +   KPS +FRT WPT+  +    V+QLGVS+E+ D V NL + A G  +RK+FALKIA DLF +MSSFS +T      M +PTN+LDRWI+RFE+KY RDPNFMLK
Sbjct:    3 NKRHQSWRHLLA----AHASVYCVHCAACVY--PSVPLYLPTTAVALRSTRAFRFCCSSAQTMMNGGIAQFGLVIAGRPVLTDFREIGPMHYVVEIGDPTLVADLTFFLLPNSPVPPGYGAVLYFAVPS----LQNWQLLGTVFAEKPSAIFRTGWPTHPDVVGQPVLQLGVSIESLDNVKNLGIEASGFAERKEFALKIAMDLFNYMSSFSTSTNQA--YMTIPTNLLDRWIERFEAKYKRDPNFMLK 239
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BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: A0A5D6XTY2_9STRA (DUF775 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTY2_9STRA)

HSP 1 Score: 181 bits (460), Expect = 2.510e-50
Identity = 91/171 (53.22%), Postives = 119/171 (69.59%), Query Frame = 2 
Query:  815 PLHPVFRAIDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNFMLK 1327
            P+H  F  ID +     I +P  V ++ FFLLPNSPVPPG+ AVLYF+ PS     +NW++LG +   KPS +FRT WPT+  +    VVQLGVS+E+ D V NL + A G+ +R++FALKIA DLF FM+SFS +T      M +PTN+LDRW++RFE+KY RDPNFMLK
Sbjct:   16 PVHTDFIEIDPAHYTLSIGDPTAVTDLTFFLLPNSPVPPGYGAVLYFAVPS----LQNWQLLGTVFAEKPSAIFRTGWPTHPDLLGQPVVQLGVSIESLDNVKNLGIEASGLAERREFALKIAMDLFNFMTSFSTSTNQA--YMTIPTNLLDRWMERFEAKYKRDPNFMLK 180
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BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: A0A024TK25_9STRA (DUF775 domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TK25_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.080e-50
Identity = 91/163 (55.83%), Postives = 118/163 (72.39%), Query Frame = 2 
Query:  839 IDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNFMLK 1327
            I  ++ V +I  P +V +I FF+LP SPVPPG AAVLYF+ P      +NW++LG++   KPS +FRT WPT+  +    V+QLGVS+E+ D V NL + A G+++RK FALKIA DLF FMSSFS  T +   +MVVPTN+LDRWI+RFESKY RDPNFM+K
Sbjct:   21 ISPTQFVVDIPYPEQVTDITFFMLPQSPVPPGFAAVLYFAVPH----LQNWQLLGSVFAEKPSAIFRTAWPTHPDVVGQPVIQLGVSIESADNVRNLGIEASGLEERKSFALKIAMDLFNFMSSFS--TSSNSNMMVVPTNLLDRWIERFESKYRRDPNFMMK 177
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BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: T0SBJ9_SAPDV (DUF775 domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0SBJ9_SAPDV)

HSP 1 Score: 177 bits (450), Expect = 6.150e-49
Identity = 87/166 (52.41%), Postives = 120/166 (72.29%), Query Frame = 2 
Query:  830 FRAIDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNFMLK 1327
            F  I  ++ V ++  P +V +I FFLLP+SPVPPG+AAVLYF+ P      +NW++LG++   KPS +FRT+WPT+  + +  ++Q+GVS+E  D V NL + A G+ +RK FA KIA DLF FMSSFS +T     +MV+PTN+LDRWI+RFE+KY RDPNFM+K
Sbjct:   17 FAEISPTQFVVDVPYPEQVTDITFFLLPHSPVPPGYAAVLYFAVPH----LQNWQLLGSVFAEKPSAIFRTSWPTHPDVANQPIIQVGVSIEPVDNVKNLGIEASGLTERKAFAHKIAVDLFNFMSSFSTSTDRS--LMVIPTNLLDRWIERFEAKYRRDPNFMMK 176
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BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: D0N9M8_PHYIT (DUF775 domain-containing protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=D0N9M8_PHYIT)

HSP 1 Score: 175 bits (444), Expect = 5.440e-48
Identity = 85/166 (51.20%), Postives = 118/166 (71.08%), Query Frame = 2 
Query:  830 FRAIDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNFMLK 1327
            FR I  +  V +IL P +V ++ FFLLP SPVPPG  AVLYF+ P+     +NW++LG +   KPS +FRT+WPT+  +    V+QLGVS+E+ D V NL + A G+++RK FALKIA+DLF ++SSFS +       M +PTN+LD+W++RFE+KY RDPNFM+K
Sbjct:   24 FREIGPAHYVVDILEPTQVTDLTFFLLPGSPVPPGFGAVLYFALPA----LQNWQLLGTVFAEKPSAIFRTSWPTHPDVVGQPVLQLGVSIESLDNVKNLGIEASGLEERKAFALKIAQDLFNYLSSFSSSNSQS--YMTIPTNLLDKWMERFEAKYRRDPNFMMK 183
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BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: A0A835ZAF1_9STRA (DUF775 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAF1_9STRA)

HSP 1 Score: 175 bits (443), Expect = 8.070e-48
Identity = 86/172 (50.00%), Postives = 116/172 (67.44%), Query Frame = 2 
Query:  815 PLHPVFRAIDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGP-EVMVVPTNVLDRWIQRFESKYNRDPNFMLK 1327
            PL   FR +D++K   E+  P +V E+VFFLLP SP+PPG  A LY+S P     F+NWE +GA+    PS + RT WPT+E ++   +VQLGVS+E+ D + NL+       DR+ FAL++A+DLF+F+SSFS     G  E++V P NVLDRWI RFE+KY RDPNF+ K
Sbjct:   17 PLISEFRVVDATKAAVEVQYPVQVAELVFFLLPTSPLPPGTGAALYYSAPR----FQNWEYIGAVEPAAPSAILRTGWPTDEALQQCPMVQLGVSIESLDTINNLKAAGSRDGDRRFFALQVARDLFRFISSFSTTQNTGEQELLVAPANVLDRWIARFEAKYARDPNFIFK 184
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BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: A0A8K1CEH9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEH9_PYTOL)

HSP 1 Score: 174 bits (440), Expect = 1.750e-47
Identity = 86/171 (50.29%), Postives = 118/171 (69.01%), Query Frame = 2 
Query:  815 PLHPVFRAIDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNFMLK 1327
            P+   F+ I   + +TEI  P +V ++ FFLLPNSPVP G+ AVLYF+ P+     +NW++LG +   KPS +FRT WPT+  +    V+QLG+S+E  D V NL + A G+ +RK FALKIA+DLF +M+SFS +       M +PTN+LDRW++RFE+KY RDPNFMLK
Sbjct:   14 PVFTDFQEIGPGRYMTEIPEPTQVTDLTFFLLPNSPVPMGYGAVLYFAVPA----LQNWQLLGTVFAEKPSAIFRTGWPTHPDVAGQPVLQLGISIEPLDNVKNLGIEASGLVERKAFALKIAQDLFNYMTSFSTSNTTA--YMTIPTNLLDRWMERFEAKYKRDPNFMLK 178
[Close]
BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Match: A0A7S3GYJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYJ8_9STRA)

HSP 1 Score: 172 bits (436), Expect = 6.810e-47
Identity = 81/168 (48.21%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:  815 PLHPVFRAIDSSKCVTEILNPREVDEIVFFLLPNSPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQMKSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFSQATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNF 1318
            P+   F+ +DS+K +T +  P  V E+ FFLLP + +PPG+ A+LY+S P     F+NW ++G++   KPSG+FRTNW  NE++++  VVQLGVS+E  + + NL +   GV+DR  FA KIA DLFQ+M+SFS  TQ G  ++ VPT++ D+W++RFE KY  DPNF
Sbjct:   20 PVITEFQLVDSTKAMTMLEQPATVPELTFFLLPTTVIPPGYGAILYYSVPP----FQNWVLIGSIDPSKPSGIFRTNWANNEEVRNCPVVQLGVSLEPLETINNLHIAGSGVEDRFAFAHKIALDLFQYMTSFSSGTQNG--MIAVPTSIFDKWMERFERKYRLDPNF 181
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1109.977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQE4_9PHAE1.040e-8881.98DUF775 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2V1Q5_9STRA7.710e-5655.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3X1K5_GLOUD3.980e-5143.78DUF775 domain-containing protein n=1 Tax=Globispor... [more]
A0A5D6XTY2_9STRA2.510e-5053.22DUF775 domain-containing protein n=1 Tax=Pythium b... [more]
A0A024TK25_9STRA3.080e-5055.83DUF775 domain-containing protein n=3 Tax=Aphanomyc... [more]
T0SBJ9_SAPDV6.150e-4952.41DUF775 domain-containing protein n=2 Tax=Saprolegn... [more]
D0N9M8_PHYIT5.440e-4851.20DUF775 domain-containing protein n=7 Tax=Peronospo... [more]
A0A835ZAF1_9STRA8.070e-4850.00DUF775 domain-containing protein n=1 Tax=Tribonema... [more]
A0A8K1CEH9_PYTOL1.750e-4750.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3GYJ8_9STRA6.810e-4748.21Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1109contigL-elsbetiae_contig1109:18750..21905 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score281.6
Seed ortholog evalue2.7e-73
Seed eggNOG ortholog2880.D7FMX4
Preferred nameC11orf73
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005829,GO:0005975,GO:0006020,GO:0006066,GO:0006606,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006996,GO:0007030,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010256,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0017038,GO:0019751,GO:0030323,GO:0030324,GO:0030544,GO:0031072,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034605,GO:0034613,GO:0035295,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048513,GO:0048583,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051169,GO:0051170,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0060541,GO:0061608,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0080134,GO:0080135,GO:0140104,GO:0140142,GO:1900034,GO:1901615
EggNOG free text desc.Hsp70 protein binding
EggNOG OGsKOG4067@1,KOG4067@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF775
Ec32 orthologEc-25_002670.1
Exons6
Model size1822
Cds size564
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1109.977.1prot_L-elsbetiae_contig1109.977.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1109 19516..21413 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815323.3558578-UTR-L-elsbetiae_contig1109:18749..195151622815323.3558578-UTR-L-elsbetiae_contig1109:18749..19515Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1109 18750..19515 +
1691682838.549265-UTR-L-elsbetiae_contig1109:18749..195151691682838.549265-UTR-L-elsbetiae_contig1109:18749..19515Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1109 18750..19515 +
1622815323.432202-UTR-L-elsbetiae_contig1109:21413..219051622815323.432202-UTR-L-elsbetiae_contig1109:21413..21905Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1109 21414..21905 +
1691682838.6207159-UTR-L-elsbetiae_contig1109:21413..219051691682838.6207159-UTR-L-elsbetiae_contig1109:21413..21905Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1109 21414..21905 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815323.3663335-CDS-L-elsbetiae_contig1109:19515..196321622815323.3663335-CDS-L-elsbetiae_contig1109:19515..19632Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 19516..19632 +
1691682838.5609891-CDS-L-elsbetiae_contig1109:19515..196321691682838.5609891-CDS-L-elsbetiae_contig1109:19515..19632Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 19516..19632 +
1622815323.3750577-CDS-L-elsbetiae_contig1109:19809..199161622815323.3750577-CDS-L-elsbetiae_contig1109:19809..19916Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 19810..19916 +
1691682838.571116-CDS-L-elsbetiae_contig1109:19809..199161691682838.571116-CDS-L-elsbetiae_contig1109:19809..19916Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 19810..19916 +
1622815323.3870616-CDS-L-elsbetiae_contig1109:20082..202031622815323.3870616-CDS-L-elsbetiae_contig1109:20082..20203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 20083..20203 +
1691682838.583231-CDS-L-elsbetiae_contig1109:20082..202031691682838.583231-CDS-L-elsbetiae_contig1109:20082..20203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 20083..20203 +
1622815323.3956873-CDS-L-elsbetiae_contig1109:20470..205571622815323.3956873-CDS-L-elsbetiae_contig1109:20470..20557Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 20471..20557 +
1691682838.5917711-CDS-L-elsbetiae_contig1109:20470..205571691682838.5917711-CDS-L-elsbetiae_contig1109:20470..20557Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 20471..20557 +
1622815323.4117146-CDS-L-elsbetiae_contig1109:20834..209081622815323.4117146-CDS-L-elsbetiae_contig1109:20834..20908Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 20835..20908 +
1691682838.6022248-CDS-L-elsbetiae_contig1109:20834..209081691682838.6022248-CDS-L-elsbetiae_contig1109:20834..20908Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 20835..20908 +
1622815323.4223764-CDS-L-elsbetiae_contig1109:21355..214131622815323.4223764-CDS-L-elsbetiae_contig1109:21355..21413Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 21356..21413 +
1691682838.6118379-CDS-L-elsbetiae_contig1109:21355..214131691682838.6118379-CDS-L-elsbetiae_contig1109:21355..21413Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1109 21356..21413 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1109.977.1

>prot_L-elsbetiae_contig1109.977.1 ID=prot_L-elsbetiae_contig1109.977.1|Name=mRNA_L-elsbetiae_contig1109.977.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
MMCDSREPRVILRSTCPLHPVFRAIDSSKCVTEILNPREVDEIVFFLLPN
SPVPPGHAAVLYFSTPSASGTFENWEVLGALGHGKPSGVFRTNWPTNEQM
KSTEVVQLGVSVETEDVVTNLQLGAGGVQDRKQFALKIAKDLFQFMSSFS
QATQAGPEVMVVPTNVLDRWIQRFESKYNRDPNFMLK*
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mRNA from alignment at L-elsbetiae_contig1109:18750..21905+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1109.977.1 ID=mRNA_L-elsbetiae_contig1109.977.1|Name=mRNA_L-elsbetiae_contig1109.977.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3156bp|location=Sequence derived from alignment at L-elsbetiae_contig1109:18750..21905+ (Laminarionema elsbetiae ELsaHSoW15)
GCAGCAGCAGTGACAGCTACAAGCAACTCGATGGAGTGGAGACTATCCCC
AGCGGTAGCAGTAAACCCACCCACGCTATAGTCTGCTTGAGTCTCGACGT
TTCGACCCCGATATAACCAATCCATAAGTCTGTGGATGGTGCACAAAGAG
CCCATATGATTGCGGCGTAGGATGGACAGCAACCCTTGGACACACTCAGG
AAGGAGGAGATGCTTCTAGAACTCAGGCTACTAAACGTCCTGTACCGGCA
ATCTATCGTGAGTATAACAGAGCGTTTTTGCCGAACCCGTCGCGCGTGTT
CACAACTCCGATACGAAACAGAGGCAGCACCTTCGAATGTCGGTCCCATT
CTGCGTCATTGCGCCCGGTAGAACAGTCATACCAGAATTCAGGTATGTGG
GATGCAAGATCAGATAGCTTATGGTAGGTGTTTGTGGGTTTTGAGGTATG
CAGTTGTTCTCGTCTCTCACTTCAGTACATGATCCTAATCATCTGTGGGG
GCCCGTGGTCACTAACCAGGGCACTCTCGGCTCCCCTAGTAGTGTATGCA
GTGATGGACCCTAACAGAGCGCAACCTTCTCTCAATCGTGCGCATGTGCA
CTGGTTAAAAGCTACGAACTGTCGTTGAAATGCTGACTGCTTCACGTATT
GCCTTCAAGCCGTACCATGTACATATGTCTTGACAAACCTCCCAGGTAGC
TCCACTACGATAGGAGTGTAATGCCATTCAGGGCAGACTTTTCCCGTGTT
TTGTAGCATCCCGCTTATGATGTGCGATAGCCGTGAGCCGCGGGTGATCC
TTCGTTCTACATGCCCCCTTCACCCCGTTTTCAGGGCGATAGATTCATCC
AAGTGTGTAACGGAGATACTGAATCCGCGAGAGGTGAGAGTCGTAGGTCT
GGGACAGCGCAAAATCCAGCTTGTCGCCACAGTATTTACCTCGAGTGCAC
GAGTTCTGTTTCTTTGAACTTGGCGTTGGGCCGTTCGAGTGGACGGTTGA
TAGTCTCTTACATCGGAATATCGCGTTCCCATATTTGCTTGCCTCCGTAC
CTCTTTTCAGGTGGACGAGATTGTGTTTTTCCTTTTGCCAAACTCTCCCG
TCCCCCCTGGCCATGCTGCCGTGCTTTACTTCAGTACTCCCAGCGCTTCT
GGAACTTTCGAGAATTGGTAAGTAGTAATCTGGTTGTACGGGCCGCACGG
CTGCAATCTGCCTTGTTGGCTGGGTACTGCTGTATGTAGACGAAACTGTC
CAGTGTTGTCGTGTGGTTTTCAACGGCTGCATGATGCTGAGCCCGCTCTG
TCGTTGACGCGTTTGACCATGTGCCTTTCACAGGGAGGTGCTCGGAGCGC
TCGGTCATGGAAAACCTTCTGGGGTGTTCCGGACGAACTGGCCTACAAAC
GAGCAGATGAAGTCAACTGAGGTAGTTCAGCTTGGCGTGAGCGTCGAAAC
CGAGGTGGGCGTGACGTCATGCAGCATGAATGGAGGGTTGTCCTCTTGGT
CCCCACATTGGGAGTTTACATGGACACCGACGTCCGTTCGTAGGAGCAGA
ACTGCATTATCTGTACTCGAAGGCAAAGGACGGGTGTCGTGTGTGCAAGT
AGAGCATGTCATGAGGTTGGTTACGAACGCCAGCAATGGAGGTAAAAAAC
CGCAGAGACTGCTGTTGCGACCATATTGTGCGTGCTGGTTGCTGCCACCA
ACCTGTTTCCTCTGACCCCAGGATGTAGTCACCAACTTACAACTGGGGGC
TGGTGGAGTGCAGGACAGGAAACAATTTGCTCTCAAGATAGCCAAGGACC
TCTTTCAGGTACGTTGCGGCATTAGTGCCTCGGAACGAGTTCTGTTTTGG
TTTGTAGGCCAGGAGCGAATGCTTTGGTAAGAGTTATGAATGCGGTGGTA
TGTTTTCCCGGGGGCACCCGGGTTCTCTTCGTACTTACGCCATGCCGGTA
TACCAACAGTCCAAGTTGTAGTTCTTCACTCAACCCTCGCTTTCAGCGAA
AGCCCAACAATTTCTATGATCTCCGTCTAACTCTCGACAGCTTGCATTAT
GATGCGTGTTCTTTGTGGCTCTACTTGTCGCACAGTTTATGTCATCCTTC
AGTCAAGCGACCCAAGCTGGTCCCGAGGTGATGGTGGTGCCAACAAACGT
GCTGGACAGGTATGTATATACAGCTTTTCTGTTAGAGATTTGGCTCGCAG
CCCCTCTGGCTTCTGGTACCGAGAATGGATGGTTCCTACATATGTACAGC
AGTATACCGCACGTGCCCAGTTTTTACTGATGCGCACGAAAACTGGGAAC
AATCGTGCGAAAGTGGCAAATTGAATATTTCTGTCAATCTCGTTGGCGTC
TCTTCAACTGACCTTACCGCGCATCACGTGCCCTCCCTTAGGAAGGAACT
CTTCGAGATGCCCTCGGGCTCTTTTGGGCTGATCGCTCATGCAAGCCTGG
TTCGGGATATAACCCTAACTTTTATGTACCACCAGTCAATGCCTCCACCA
ACCTTAACAGAGTGTGTATACCCCCCTTTCGGGCATTTCTTCACAAGCAG
TCTCAATCCATTCACGGCTGATGATATCTCTGCTCCCTCCCGTTTGCATG
GATCAGGTGGATTCAGCGCTTCGAGTCCAAGTACAATCGAGACCCAAACT
TCATGCTGAAGTAGTCATGTACGGCTTTGGGTTCAAGCTAGGTAGCAATG
AAGTTAAGTCTGTACGTAGGAGTACCAGATTGTAGATAATAAATCGCCTG
GAGTAGCCCCAGCCTCGTCTGAGTACCCTTCCTTCCTTTGATGTAGGAAA
ATACTCCAGGGTTTGGATGAGGCAAGATGAAAGAGGAATTTAGCAAGAGA
AGGAGAGGAATATGGAAGTATCACACTTTTGGTGCATCTTGCCCACACCG
ACAGGCGTTGCACTCTCCTTAGGAGGGTCCTCCAGCGATCCCCTGTAAGT
TTATTTGCAGGACGAGTGATAAAAATGAAAGTACAAAGGGCTGGGGCGCG
GACTCTTCGTATGTACTATTCATATAGTCAGTTGAAGGGTGGTTGGGTGG
GCAGATGGGGAGAGATGATCAATCTGCCCGCAATTAATTAGATACGCTTC
AGGTACTTTCTGACCCAAACAAATGACCACACTACGACGACGGACAATAA
CGAGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1109:18750..21905+

>mRNA_L-elsbetiae_contig1109.977.1 ID=mRNA_L-elsbetiae_contig1109.977.1|Name=mRNA_L-elsbetiae_contig1109.977.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig1109:18750..21905+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGTGCGATAGCCGTGAGCCGCGGGTGATCCTTCGTTCTACATGCCC
CCTTCACCCCGTTTTCAGGGCGATAGATTCATCCAAGTGTGTAACGGAGA
TACTGAATCCGCGAGAGATGATGTGCGATAGCCGTGAGCCGCGGGTGATC
CTTCGTTCTACATGCCCCCTTCACCCCGTTTTCAGGGCGATAGATTCATC
CAAGTGTGTAACGGAGATACTGAATCCGCGAGAGGTGGACGAGATTGTGT
TTTTCCTTTTGCCAAACTCTCCCGTCCCCCCTGGCCATGCTGCCGTGCTT
TACTTCAGTACTCCCAGCGCTTCTGGAACTTTCGAGAATTGGTGGACGAG
ATTGTGTTTTTCCTTTTGCCAAACTCTCCCGTCCCCCCTGGCCATGCTGC
CGTGCTTTACTTCAGTACTCCCAGCGCTTCTGGAACTTTCGAGAATTGGG
AGGTGCTCGGAGCGCTCGGTCATGGAAAACCTTCTGGGGTGTTCCGGACG
AACTGGCCTACAAACGAGCAGATGAAGTCAACTGAGGTAGTTCAGCTTGG
CGTGAGCGTCGAAACCGAGGGAGGTGCTCGGAGCGCTCGGTCATGGAAAA
CCTTCTGGGGTGTTCCGGACGAACTGGCCTACAAACGAGCAGATGAAGTC
AACTGAGGTAGTTCAGCTTGGCGTGAGCGTCGAAACCGAGGATGTAGTCA
CCAACTTACAACTGGGGGCTGGTGGAGTGCAGGACAGGAAACAATTTGCT
CTCAAGATAGCCAAGGACCTCTTTCAGGATGTAGTCACCAACTTACAACT
GGGGGCTGGTGGAGTGCAGGACAGGAAACAATTTGCTCTCAAGATAGCCA
AGGACCTCTTTCAGTTTATGTCATCCTTCAGTCAAGCGACCCAAGCTGGT
CCCGAGGTGATGGTGGTGCCAACAAACGTGCTGGACAGTTTATGTCATCC
TTCAGTCAAGCGACCCAAGCTGGTCCCGAGGTGATGGTGGTGCCAACAAA
CGTGCTGGACAGGTGGATTCAGCGCTTCGAGTCCAAGTACAATCGAGACC
CAAACTTCATGCTGAAGTAGGTGGATTCAGCGCTTCGAGTCCAAGTACAA
TCGAGACCCAAACTTCATGCTGAAGTAG
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