mRNA_L-elsbetiae_contig11078.969.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE) HSP 1 Score: 321 bits (822), Expect = 3.920e-106 Identity = 159/211 (75.36%), Postives = 180/211 (85.31%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633 QFGVAV GGVE+V M+AQLVHQTGHWVV +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSG R+ IECK GVQQG+GMGPPLFCF +VPI+ KLR KY+ GV + AYMDDI+L+FK T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK Sbjct: 203 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 413
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE) HSP 1 Score: 324 bits (830), Expect = 1.740e-104 Identity = 163/212 (76.89%), Postives = 183/212 (86.32%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDI-NLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633 QFGVAV GGVE+V M+AQLVHQTGHWVV +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+ GVR+ AYMDDI +L+FK T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK Sbjct: 112 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 323
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE) HSP 1 Score: 316 bits (809), Expect = 8.500e-104 Identity = 158/211 (74.88%), Postives = 179/211 (84.83%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633 QFGVAV GGVE+V M+AQLVHQTGHWVV +CSNAFNT +RTAI A+AAKS P LV YIARCYDEI AK+IY MDSGER+ IECKSGVQQG+GMGPPLF F + PIV KLR KY+ GV + AYMDDI+L+FK T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK Sbjct: 69 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 279
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE) HSP 1 Score: 322 bits (825), Expect = 2.600e-103 Identity = 160/211 (75.83%), Postives = 181/211 (85.78%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633 QFG AV GGVE+V M+AQLVHQTGHWVV +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+ GV + AYMDDI+L+FK T + ++V+P + DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK Sbjct: 28 QFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 238
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE) HSP 1 Score: 321 bits (823), Expect = 2.600e-102 Identity = 160/211 (75.83%), Postives = 182/211 (86.26%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633 QFGVAV GGVE+V ++AQLVHQTGHWVV +CSNAFNT +RTAI A+A+KS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+ GV + AYMDDI+L+FK+ T + ++V P L DELEAVGIIVNR KSSALPPPGH+VTPTERR L +AGLPIAEEGITVVGVP GTDA+VE+ AMK Sbjct: 480 QFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 690
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE) HSP 1 Score: 325 bits (833), Expect = 1.670e-100 Identity = 162/211 (76.78%), Postives = 182/211 (86.26%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633 QFGVAV GGVE+V M+AQLVHQTGHWVV +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+ GV + AYMDDI+L+FK T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK Sbjct: 481 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 691
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE) HSP 1 Score: 308 bits (790), Expect = 1.860e-100 Identity = 152/207 (73.43%), Postives = 176/207 (85.02%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEE 621 QFGVAV GGVE+V M+AQLVHQTGHWVV +CS+AFNT +RT I A+AAKS P ++ YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR Y+ GV + AYMDDI+L+F T + ++++P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ Sbjct: 105 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVED 311
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE) HSP 1 Score: 315 bits (807), Expect = 5.300e-99 Identity = 158/211 (74.88%), Postives = 179/211 (84.83%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633 QFGVAV GGVE+V M+AQLVHQTGHWVV +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+ GV + AYMDDI+L+FK T + ++V+P L DELEAVGIIVNR KSSAL PPG +V P ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ A+K Sbjct: 502 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAIK 712
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE) HSP 1 Score: 299 bits (765), Expect = 1.220e-92 Identity = 160/262 (61.07%), Postives = 182/262 (69.47%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWV---------------------------------------------------VHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633 QFGVAV GVE+V M+AQLVHQTGHWV V +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIVSK+R KY+ GV + AY+DDI+L+FK T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK Sbjct: 69 QFGVAVVAGVEQVAMDAQLVHQTGHWVKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGQWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 330
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE) HSP 1 Score: 290 bits (743), Expect = 2.340e-90 Identity = 158/266 (59.40%), Postives = 179/266 (67.29%), Query Frame = 1 Query: 1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSN-------------------------------------------------------AFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633 QFGVA G VE+V M+AQLVHQTGHWVV +CSN AFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+ GV + AYMDDI+L+FK T + ++V+P L +ELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP TDA+VE+ AMK Sbjct: 452 QFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIETDAYVEDIAMK 717 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11078.969.1 >prot_L-elsbetiae_contig11078.969.1 ID=prot_L-elsbetiae_contig11078.969.1|Name=mRNA_L-elsbetiae_contig11078.969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKback to top mRNA from alignment at L-elsbetiae_contig11078:2732..3364+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11078.969.1 ID=mRNA_L-elsbetiae_contig11078.969.1|Name=mRNA_L-elsbetiae_contig11078.969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=633bp|location=Sequence derived from alignment at L-elsbetiae_contig11078:2732..3364+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11078:2732..3364+ >mRNA_L-elsbetiae_contig11078.969.1 ID=mRNA_L-elsbetiae_contig11078.969.1|Name=mRNA_L-elsbetiae_contig11078.969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig11078:2732..3364+ (Laminarionema elsbetiae ELsaHSoW15)back to top |