mRNA_L-elsbetiae_contig11078.969.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11078.969.1
Unique NamemRNA_L-elsbetiae_contig11078.969.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 3.920e-106
Identity = 159/211 (75.36%), Postives = 180/211 (85.31%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633
            QFGVAV GGVE+V M+AQLVHQTGHWVV  +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSG R+ IECK GVQQG+GMGPPLFCF +VPI+ KLR KY+  GV + AYMDDI+L+FK  T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK
Sbjct:  203 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 413          
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 1.740e-104
Identity = 163/212 (76.89%), Postives = 183/212 (86.32%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDI-NLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633
            QFGVAV GGVE+V M+AQLVHQTGHWVV  +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+  GVR+ AYMDDI +L+FK  T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK
Sbjct:  112 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 323          
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 8.500e-104
Identity = 158/211 (74.88%), Postives = 179/211 (84.83%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633
            QFGVAV GGVE+V M+AQLVHQTGHWVV  +CSNAFNT +RTAI A+AAKS P LV YIARCYDEI AK+IY MDSGER+ IECKSGVQQG+GMGPPLF F + PIV KLR KY+  GV + AYMDDI+L+FK  T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK
Sbjct:   69 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 279          
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 2.600e-103
Identity = 160/211 (75.83%), Postives = 181/211 (85.78%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633
            QFG AV GGVE+V M+AQLVHQTGHWVV  +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+  GV + AYMDDI+L+FK  T + ++V+P + DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK
Sbjct:   28 QFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 238          
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 2.600e-102
Identity = 160/211 (75.83%), Postives = 182/211 (86.26%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633
            QFGVAV GGVE+V ++AQLVHQTGHWVV  +CSNAFNT +RTAI A+A+KS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+  GV + AYMDDI+L+FK+ T + ++V P L DELEAVGIIVNR KSSALPPPGH+VTPTERR L +AGLPIAEEGITVVGVP GTDA+VE+ AMK
Sbjct:  480 QFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERRPLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 690          
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 1.670e-100
Identity = 162/211 (76.78%), Postives = 182/211 (86.26%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633
            QFGVAV GGVE+V M+AQLVHQTGHWVV  +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+  GV + AYMDDI+L+FK  T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK
Sbjct:  481 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 691          
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 1.860e-100
Identity = 152/207 (73.43%), Postives = 176/207 (85.02%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEE 621
            QFGVAV GGVE+V M+AQLVHQTGHWVV  +CS+AFNT +RT I A+AAKS P ++ YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR  Y+  GV + AYMDDI+L+F   T + ++++P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+
Sbjct:  105 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVED 311          
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 5.300e-99
Identity = 158/211 (74.88%), Postives = 179/211 (84.83%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633
            QFGVAV GGVE+V M+AQLVHQTGHWVV  +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+  GV + AYMDDI+L+FK  T + ++V+P L DELEAVGIIVNR KSSAL PPG +V P ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ A+K
Sbjct:  502 QFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAIK 712          
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 1.220e-92
Identity = 160/262 (61.07%), Postives = 182/262 (69.47%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWV---------------------------------------------------VHMNCSNAFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633
            QFGVAV  GVE+V M+AQLVHQTGHWV                                                   V  +CSNAFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIVSK+R KY+  GV + AY+DDI+L+FK  T + ++V+P L DELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP GTDA+VE+ AMK
Sbjct:   69 QFGVAVVAGVEQVAMDAQLVHQTGHWVKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGQWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIGTDAYVEDIAMK 330          
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 2.340e-90
Identity = 158/266 (59.40%), Postives = 179/266 (67.29%), Query Frame = 1
Query:    1 QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSN-------------------------------------------------------AFNTARRTAITARAAKSTPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFCFAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADELEAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNGTDAHVEECAMK 633
            QFGVA  G VE+V M+AQLVHQTGHWVV  +CSN                                                       AFNT +RTAI A+AAKS P LV YIARCYDEIPAKAIY MDSGER+ IECKSGVQQG+GMGPPLFCF +VPIV KLR KY+  GV + AYMDDI+L+FK  T + ++V+P L +ELEAVGIIVNR KSSALPPPGH+VTP ERRLL +AGLPIAEEGITVVGVP  TDA+VE+ AMK
Sbjct:  452 QFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRLLGDAGLPIAEEGITVVGVPIETDAYVEDIAMK 717          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11078.969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR59_9PHAE3.920e-10675.36Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LL14_9PHAE1.740e-10476.89Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE8.500e-10474.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE2.600e-10375.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE2.600e-10275.83Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE1.670e-10076.78Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE1.860e-10073.43Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE5.300e-9974.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLG6_9PHAE1.220e-9261.07Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE2.340e-9059.40Reverse transcriptase domain-containing protein (F... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11078contigL-elsbetiae_contig11078:2732..3364 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size633
Cds size633
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815322.296034-CDS-L-elsbetiae_contig11078:2731..33641622815322.296034-CDS-L-elsbetiae_contig11078:2731..3364Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11078 2732..3364 +
1691682837.85572-CDS-L-elsbetiae_contig11078:2731..33641691682837.85572-CDS-L-elsbetiae_contig11078:2731..3364Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11078 2732..3364 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11078.969.1prot_L-elsbetiae_contig11078.969.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11078 2732..3364 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11078.969.1

>prot_L-elsbetiae_contig11078.969.1 ID=prot_L-elsbetiae_contig11078.969.1|Name=mRNA_L-elsbetiae_contig11078.969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
QFGVAVPGGVERVGMEAQLVHQTGHWVVHMNCSNAFNTARRTAITARAAK
STPALVAYIARCYDEIPAKAIYEMDSGERQVIECKSGVQQGNGMGPPLFC
FAIVPIVSKLRVKYEPRGVRIGAYMDDINLYFKETTEDAMEVVPHLADEL
EAVGIIVNRRKSSALPPPGHEVTPTERRLLEEAGLPIAEEGITVVGVPNG
TDAHVEECAMK
back to top

mRNA from alignment at L-elsbetiae_contig11078:2732..3364+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11078.969.1 ID=mRNA_L-elsbetiae_contig11078.969.1|Name=mRNA_L-elsbetiae_contig11078.969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=633bp|location=Sequence derived from alignment at L-elsbetiae_contig11078:2732..3364+ (Laminarionema elsbetiae ELsaHSoW15)
CAGTTCGGCGTGGCCGTGCCCGGAGGAGTGGAACGAGTCGGGATGGAAGC GCAGCTGGTTCACCAGACTGGCCACTGGGTAGTTCACATGAACTGCTCCA ACGCGTTCAACACAGCCAGACGCACCGCCATAACAGCCCGGGCGGCGAAA AGCACCCCAGCGCTCGTCGCATACATCGCAAGGTGCTACGACGAAATACC CGCCAAGGCGATATACGAGATGGATTCCGGGGAGCGTCAGGTGATTGAAT GCAAGAGTGGCGTGCAACAGGGAAACGGAATGGGACCGCCTCTGTTCTGC TTCGCGATCGTCCCAATTGTATCCAAGCTTCGGGTCAAGTACGAACCCCG CGGGGTGCGTATTGGGGCCTATATGGACGACATCAACCTCTACTTCAAAG AAACCACGGAAGACGCCATGGAGGTGGTACCACACCTCGCGGACGAACTT GAAGCAGTGGGCATCATAGTCAACAGAAGGAAGAGCTCGGCACTTCCCCC ACCAGGGCACGAGGTGACGCCAACAGAGAGGAGACTTCTCGAAGAAGCAG GCTTACCGATCGCGGAGGAGGGCATCACGGTGGTAGGAGTCCCGAATGGA ACGGATGCGCACGTCGAGGAGTGCGCCATGAAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig11078:2732..3364+

>mRNA_L-elsbetiae_contig11078.969.1 ID=mRNA_L-elsbetiae_contig11078.969.1|Name=mRNA_L-elsbetiae_contig11078.969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig11078:2732..3364+ (Laminarionema elsbetiae ELsaHSoW15)
CAGTTCGGCGTGGCCGTGCCCGGAGGAGTGGAACGAGTCGGGATGGAAGC
GCAGCTGGTTCACCAGACTGGCCACTGGGTAGTTCACATGAACTGCTCCA
ACGCGTTCAACACAGCCAGACGCACCGCCATAACAGCCCGGGCGGCGAAA
AGCACCCCAGCGCTCGTCGCATACATCGCAAGGTGCTACGACGAAATACC
CGCCAAGGCGATATACGAGATGGATTCCGGGGAGCGTCAGGTGATTGAAT
GCAAGAGTGGCGTGCAACAGGGAAACGGAATGGGACCGCCTCTGTTCTGC
TTCGCGATCGTCCCAATTGTATCCAAGCTTCGGGTCAAGTACGAACCCCG
CGGGGTGCGTATTGGGGCCTATATGGACGACATCAACCTCTACTTCAAAG
AAACCACGGAAGACGCCATGGAGGTGGTACCACACCTCGCGGACGAACTT
GAAGCAGTGGGCATCATAGTCAACAGAAGGAAGAGCTCGGCACTTCCCCC
ACCAGGGCACGAGGTGACGCCAACAGAGAGGAGACTTCTCGAAGAAGCAG
GCTTACCGATCGCGGAGGAGGGCATCACGGTGGTAGGAGTCCCGAATGGA
ACGGATGCGCACGTCGAGGAGTGCGCCATGAAGCAGTTCGGCGTGGCCGT
GCCCGGAGGAGTGGAACGAGTCGGGATGGAAGCGCAGCTGGTTCACCAGA
CTGGCCACTGGGTAGTTCACATGAACTGCTCCAACGCGTTCAACACAGCC
AGACGCACCGCCATAACAGCCCGGGCGGCGAAAAGCACCCCAGCGCTCGT
CGCATACATCGCAAGGTGCTACGACGAAATACCCGCCAAGGCGATATACG
AGATGGATTCCGGGGAGCGTCAGGTGATTGAATGCAAGAGTGGCGTGCAA
CAGGGAAACGGAATGGGACCGCCTCTGTTCTGCTTCGCGATCGTCCCAAT
TGTATCCAAGCTTCGGGTCAAGTACGAACCCCGCGGGGTGCGTATTGGGG
CCTATATGGACGACATCAACCTCTACTTCAAAGAAACCACGGAAGACGCC
ATGGAGGTGGTACCACACCTCGCGGACGAACTTGAAGCAGTGGGCATCAT
AGTCAACAGAAGGAAGAGCTCGGCACTTCCCCCACCAGGGCACGAGGTGA
CGCCAACAGAGAGGAGACTTCTCGAAGAAGCAGGCTTACCGATCGCGGAG
GAGGGCATCACGGTGGTAGGAGTCCCGAATGGAACGGATGCGCACGTCGA
GGAGTGCGCCATGAAG
back to top