mRNA_L-elsbetiae_contig11072.967.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: A0A6H5L0H9_9PHAE (Na_H_Exchanger domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H9_9PHAE) HSP 1 Score: 288 bits (736), Expect = 7.410e-90 Identity = 145/166 (87.35%), Postives = 154/166 (92.77%), Query Frame = 1 Query: 1 FFTDVHIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQGIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAEAT 498 FFTDVHIFL ++WQVL LAGPGVM ATIMMA FSK++FPY WDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFF+A+ GIGSTS G V+ QFVRLGLGGP VGF TGM+GSFAIGYILEDHLSEIT TVVVCFS+FLLAEAT Sbjct: 131 FFTDVHIFLREMWQVLVLAGPGVMAATIMMAVFSKYVFPYDWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDASTGIGSTSVGHVVAQFVRLGLGGPAVGFFTGMIGSFAIGYILEDHLSEITCTVVVCFSAFLLAEAT 296
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI) HSP 1 Score: 288 bits (738), Expect = 2.730e-87 Identity = 145/166 (87.35%), Postives = 155/166 (93.37%), Query Frame = 1 Query: 1 FFTDVHIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQGIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAEAT 498 FFTDVHIFL ++WQVL LAGPGV+ ATIMMA FSK++FPY WDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFF+A+ GIGSTS G V+TQFVRLGLGGP VGF TGM+GSFAIGYILEDHLSEIT TVVVCFS+FLLAEAT Sbjct: 64 FFTDVHIFLREMWQVLVLAGPGVLAATIMMAVFSKYVFPYDWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFDASTGIGSTSVGHVVTQFVRLGLGGPAVGFFTGMIGSFAIGYILEDHLSEITCTVVVCFSAFLLAEAT 229
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: D8LKR2_ECTSI (Sodium/hydrogen exchanger family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR2_ECTSI) HSP 1 Score: 206 bits (523), Expect = 1.030e-59 Identity = 103/166 (62.05%), Postives = 128/166 (77.11%), Query Frame = 1 Query: 1 FFTDVHIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQGIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAEAT 498 F TDVHIF + WQV+ LAGPGV +ATI+ A+ K++FPYGWDWN L G + SATDPVAVVAL+K+LGVSERL VLIEGESLLND T IVVF VF +A G+ +S VL VR+ GGP+VG GM GSF +GYI++D ++EIT+TV+VCFSSF+++EAT Sbjct: 27 FETDVHIFQREFWQVVTLAGPGVAIATIITASIVKYVFPYGWDWNLSLMLGGILSATDPVAVVALLKDLGVSERLNVLIEGESLLNDATGIVVFIVFRDAFVGVADSSPAQVLVTAVRMSFGGPMVGLALGMFGSFLLGYIIDDAMTEITVTVIVCFSSFIISEAT 192
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: F0Y140_AURAN (Na_H_Exchanger domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y140_AURAN) HSP 1 Score: 175 bits (444), Expect = 2.810e-48 Identity = 97/169 (57.40%), Postives = 117/169 (69.23%), Query Frame = 1 Query: 1 FFTDVHIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFP-YGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQ----GIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAE 492 F TD HIF Q WQ+L LAGPGV+VA+I+ F K +F YGWDW T L FGAM SATDPVAVVAL+KELGVSERL LIEGESLLNDGT+IVVF VF +A + S VL RLG GPVVG G + +GY+L D L+EIT+T++ C+++F +AE Sbjct: 77 FMTDTHIFSRQKWQILTLAGPGVLVASILTGGFVKAVFTDYGWDWPTVLMFGAMMSATDPVAVVALLKELGVSERLGTLIEGESLLNDGTAIVVFDVFKHALEHKPCDAEMPSWQSVLRMLFRLGALGPVVGTAIGWCAATLLGYVLNDPLNEITITLITCYAAFAVAE 245
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: A0A6H5LPB6_9PHAE (Na_H_Exchanger domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LPB6_9PHAE) HSP 1 Score: 167 bits (424), Expect = 3.660e-46 Identity = 86/161 (53.42%), Postives = 117/161 (72.67%), Query Frame = 1 Query: 16 HIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQGIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAEAT 498 HI +L Q++ LAGPGV++ + A F KF+ PY WDWN + FG+M +ATDPVAVVAL++ELGVSE+L LIEGESLLNDG++IVVF VF A +G S + V+ RL LGGP +G + G++G+F +GY++ D L E++LTV++ FS+F L EAT Sbjct: 120 HILERRLGQIIFLAGPGVILGAGLTAVFMKFVLPYDWDWNLSMVFGSMVAATDPVAVVALLEELGVSEKLGTLIEGESLLNDGSAIVVFEVFLEAVEGH-SRNWHEVIEFGARLALGGPAIGAVIGIMGAFVLGYVINDALVEVSLTVLLAFSTFALCEAT 279
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: A0A836CH43_9STRA (Sodium/hydrogen exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH43_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.450e-45 Identity = 85/167 (50.90%), Postives = 118/167 (70.66%), Query Frame = 1 Query: 1 FFTDVHIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFPYGWDWNTCLFFGAMTSATDPVAVVALMKE-LGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQGIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAEAT 498 F TDVH+F + WQV+ LAGPG ++A++ A +F PYGW W + GA+ SATDP ++VAL+++ L VS+RLA IEGESLLNDG ++V+F +F +A G + A + RL LGGP++G G+VGSF +G IL+D SEIT+T+V+C+S+FLLAEAT Sbjct: 26 FNTDVHVFQREFWQVVTLAGPGTVIASVFTALILQFWLPYGWSWYIGMTLGAVLSATDPPSIVALLRDQLSVSQRLAARIEGESLLNDGVAVVIFVIFKDALLGGKDSQASHIAATAARLALGGPLLGLAVGIVGSFVLGRILDDAFSEITITIVLCYSAFLLAEAT 192
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: A0A7S1UK40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK40_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.560e-45 Identity = 93/166 (56.02%), Postives = 116/166 (69.88%), Query Frame = 1 Query: 1 FFTDVHIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQGIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAEAT 498 F TD HIF + QVL LA PGV++AT++ A + PY + +N + FGAM SATDPVAVVALMKELGVSERLA L+EGESL NDGTSIV+F VF +A G + +AG ++ F+RL LGG V G G AI YIL D +SEIT+T++ F +FL+AEAT Sbjct: 109 FGTDYHIFAREASQVLVLAVPGVIMATLLTALIVWRVLPYNFPFNASMMFGAMLSATDPVAVVALMKELGVSERLATLMEGESLFNDGTSIVLFEVFRDALTGAANRNAGELIAFFLRLALGGAVAGIAVGAACVIAISYILHDGMSEITITIIGAFGAFLVAEAT 274
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: A0A7S2SQN5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQN5_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.960e-44 Identity = 86/168 (51.19%), Postives = 112/168 (66.67%), Query Frame = 1 Query: 1 FFTDVHIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQ----GIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAE 492 F TDVHI + QVL LAGPGV+V+T + A F K++F YGW W CL FG+M SATDPVAVVAL K+LGV++RL LIEGE L+NDG++IV+F++ A + SAG V+T ++L LGGPVVG + + D SE+TLTVV C++ FL+AE Sbjct: 150 FSTDVHIIRHEALQVLFLAGPGVIVSTFLTALFVKYVFNYGWSWTLCLLFGSMMSATDPVAVVALFKDLGVNQRLGTLIEGEGLMNDGSAIVIFNICLAAIEKRRTNNAGLSAGDVVTTALQLSLGGPVVGLVLXXXXXXXXXXXINDLKSEVTLTVVGCYACFLVAE 317
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: A0A836CJL4_9STRA (Cation/H+ exchanger (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJL4_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.220e-43 Identity = 78/161 (48.45%), Postives = 110/161 (68.32%), Query Frame = 1 Query: 16 HIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFPYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQGIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAEAT 498 H+ Q+WQVL LA P V+++ + AAF K+ PY W W CL G++ S TDPVA VAL+KELGVSE L+ L+E SL NDG++ V+F +F A +G +AG V F+R LGGP +GF+ G+ + A+ I+ D L+EITLT+V+C+S++L+AE T Sbjct: 23 HLLWRQIWQVLWLAFPAVIISAGLTAAFVKYALPYRWSWLLCLLLGSILSLTDPVATVALLKELGVSESLSTLVEAVSLFNDGSAFVLFLMFLGAVEG-DELTAGDVPVMFIRASLGGPAIGFVLGLAAAQALRLIVNDALAEITLTLVMCYSTWLVAENT 182
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Match: A0A7S3JZM7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZM7_9STRA) HSP 1 Score: 162 bits (409), Expect = 5.180e-43 Identity = 86/166 (51.81%), Postives = 115/166 (69.28%), Query Frame = 1 Query: 10 DVHIFLTQLWQVLALAGPGVMVATIMMAAFSKFIF-PYGWDWNTCLFFGAMTSATDPVAVVALMKELGVSERLAVLIEGESLLNDGTSIVVFSVFFNAAQ----GIGSTSAGFVLTQFVRLGLGGPVVGFLTGMVGSFAIGYILEDHLSEITLTVVVCFSSFLLAE 492 D HIF Q+L+LAGPGV+VAT++ A F+K++F Y WDW TCL FGA+ SATDPVAVVAL+KELGVSERL LIEGESLLNDGT+IV+F VFF A + A ++ RL GP+VG + G + + +G +L D +EI +T++ C++SF +A+ Sbjct: 88 DTHIFARIRTQILSLAGPGVLVATVLTAIFTKYVFVAYEWDWPTCLMFGAILSATDPVAVVALLKELGVSERLGTLIEGESLLNDGTAIVIFDVFFEALEKRPCSPSMPQALHIIELIFRLAALGPIVGVIIGFICTSLLGAVLNDPYNEIAITLLACYASFGIAQ 253 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11072.967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11072.967.1 >prot_L-elsbetiae_contig11072.967.1 ID=prot_L-elsbetiae_contig11072.967.1|Name=mRNA_L-elsbetiae_contig11072.967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp FFTDVHIFLTQLWQVLALAGPGVMVATIMMAAFSKFIFPYGWDWNTCLFFback to top mRNA from alignment at L-elsbetiae_contig11072:3902..6342+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11072.967.1 ID=mRNA_L-elsbetiae_contig11072.967.1|Name=mRNA_L-elsbetiae_contig11072.967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2441bp|location=Sequence derived from alignment at L-elsbetiae_contig11072:3902..6342+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11072:3902..6342+ >mRNA_L-elsbetiae_contig11072.967.1 ID=mRNA_L-elsbetiae_contig11072.967.1|Name=mRNA_L-elsbetiae_contig11072.967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig11072:3902..6342+ (Laminarionema elsbetiae ELsaHSoW15)back to top |