mRNA_L-elsbetiae_contig11070.965.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: A0A6H5L4R5_9PHAE (Glyco_hydro_114 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4R5_9PHAE) HSP 1 Score: 191 bits (485), Expect = 7.420e-60 Identity = 94/119 (78.99%), Postives = 102/119 (85.71%), Query Frame = 1 Query: 1 IWQPPVNTTWQWQIQFQVNTSFDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNVYA 357 IWQP N TWQWQ+QFQVNTSFDVDMY XXXXX +T+ FDEIKA+GS VICYFSAGTREDWR+DA DFPE LG+PL DW+GE+WVDVNNE VR VMAARLD A KGCDGVEPDNV A Sbjct: 26 IWQPATNATWQWQLQFQVNTSFDVDMYXXXXXXXDTSVFDEIKAQGSVVICYFSAGTREDWREDADDFPEEGLGKPLADWDGEVWVDVNNEEVRAVMAARLDTAVEKGCDGVEPDNVQA 144
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: D7FW90_ECTSI (Glyco_hydro_114 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW90_ECTSI) HSP 1 Score: 187 bits (476), Expect = 1.340e-58 Identity = 92/127 (72.44%), Postives = 106/127 (83.46%), Query Frame = 1 Query: 64 FDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNV--YAEIMYGVDAGVDVTADQQLDYNTFLATE 438 +D+D++D V+T+ FDEIKA+GS VICYFSAGTREDWR+DA DFPE LG PL DW+GE+WVDVNNE VR VMAARLD A KGCDGVEPDNV YAEI++G D GV+VTAD+QLDYNTFLATE Sbjct: 2 YDIDLFD-----VDTSVFDEIKAQGSVVICYFSAGTREDWREDADDFPEEGLGAPLADWDGEVWVDVNNEEVRAVMAARLDKAVEKGCDGVEPDNVQVYAEILWGADTGVNVTADEQLDYNTFLATE 123
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: A0A4R3HPG2_9GAMM (Glyco_hydro_114 domain-containing protein n=1 Tax=Reinekea marinisedimentorum TaxID=230495 RepID=A0A4R3HPG2_9GAMM) HSP 1 Score: 174 bits (440), Expect = 5.920e-51 Identity = 84/143 (58.74%), Postives = 102/143 (71.33%), Query Frame = 1 Query: 4 WQPPVNTTWQWQIQFQVNTSFDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNVYAEIMYGVDAGVDVTADQQLDYNTFLA 432 +QP V+TTWQWQI VNT +DVD+YD T+ +E++A G AVICYFSAG+ EDWR+D DFPE ALG+ L W+GE W+D+ NE VR +MAAR+DLAA KGCDGVEPDNV Y G D++ D QLDYN FLA Sbjct: 88 YQPEVSTTWQWQISGTVNTDYDVDVYDIDLFDTHTSVIEELQADGKAVICYFSAGSYEDWREDEADFPEEALGKDLDGWDGENWLDITNETVRKIMAARMDLAAEKGCDGVEPDNVDG---YSNKTGFDLSYDDQLDYNIFLA 227
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: A0A7V4LGC7_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4LGC7_9DELT) HSP 1 Score: 169 bits (428), Expect = 4.360e-49 Identity = 82/146 (56.16%), Postives = 100/146 (68.49%), Query Frame = 1 Query: 1 IWQPPVNTTWQWQIQFQVNTSFDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNVYAEIMYGVDAGVDVTADQQLDYNTFLATE 438 +W+P T WQWQ+ ++ S DVDMYD A D ++A+G AVICYFSAG+REDWR+DAGDFP AA+GEPL W GE W+D+ + VR +M ARLD A A+ CDGVEPDNV A Y D+G +TA QLDYN FLA E Sbjct: 99 VWRPAPGTRWQWQLSGPIDDSLDVDMYDIDLFDAPQAVIDGLRARGVAVICYFSAGSREDWREDAGDFPPAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDA---YANDSGFPLTAAHQLDYNRFLAAE 241
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: A6GAS5_9DELT (Putative endo alpha-1,4 polygalactosaminidase n=2 Tax=Plesiocystis pacifica TaxID=191768 RepID=A6GAS5_9DELT) HSP 1 Score: 165 bits (418), Expect = 7.280e-48 Identity = 83/146 (56.85%), Postives = 99/146 (67.81%), Query Frame = 1 Query: 1 IWQPPVNTTWQWQIQFQVNTSFDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNVYAEIMYGVDAGVDVTADQQLDYNTFLATE 438 +W PP TTWQWQ+ ++ SF+V+ YD E T E++A+G AVICYFSAG+ EDWR DA FP AALGEPL W GE W+DV +E VRD+M ARLDLA +GCD VEPDNV I D+G +TA QLDYN FLA E Sbjct: 71 VWCPPPGTTWQWQLVGALDASFEVEAYDIDLFDNEAQTVAELQAQGRAVICYFSAGSFEDWRPDADAFPPAALGEPLDGWPGERWLDVRDEAVRDIMRARLDLAVERGCDAVEPDNVDGYIN---DSGFPLTASDQLDYNRFLAEE 213
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: A0A7X9IZM4_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X9IZM4_9DELT) HSP 1 Score: 162 bits (410), Expect = 2.280e-46 Identity = 79/146 (54.11%), Postives = 98/146 (67.12%), Query Frame = 1 Query: 1 IWQPPVNTTWQWQIQFQVNTSFDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNVYAEIMYGVDAGVDVTADQQLDYNTFLATE 438 IW+P T WQWQ+ ++ S DV+MYD A D ++A+G VICYFSAG+RE+WR+DAGDFP AA+GEPL W GE W+D+ + VR +M ARLD A A+ CDGVEPDNV A Y D+G + A QLDYN FLA E Sbjct: 101 IWRPAPGTRWQWQLTGTIDDSLDVEMYDIDLFEAPQAVIDGLRARGVVVICYFSAGSREEWREDAGDFPAAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDA---YANDSGFPLIAAHQLDYNRFLAAE 243
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: A0A150SSH0_SORCE (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SSH0_SORCE) HSP 1 Score: 156 bits (395), Expect = 2.750e-45 Identity = 81/143 (56.64%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 10 PPVNTTWQWQIQFQVNTSFDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNVYAEIMYGVDAGVDVTADQQLDYNTFLATE 438 P TTWQWQ+ ++TS DV MYD AT D ++A G VICYFSAG+ EDWR DA FP AALG PL W GE W+D + GVRDVM ARLDLA K CDGVEPDNV Y +G +TA QLDYN FLA E Sbjct: 2 PAPGTTWQWQLTGTIDTSLDVAMYDIDLFEAPQATIDALRAAGKKVICYFSAGSSEDWRSDASRFPAAALGNPLDGWPGERWLDTRSAGVRDVMKARLDLAVQKRCDGVEPDNVDG---YTNGSGFPLTAATQLDYNRFLAAE 141
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: A9EVK6_SORC5 (Glyco_hydro_114 domain-containing protein n=1 Tax=Sorangium cellulosum (strain So ce56) TaxID=448385 RepID=A9EVK6_SORC5) HSP 1 Score: 162 bits (411), Expect = 7.920e-45 Identity = 83/146 (56.85%), Postives = 93/146 (63.70%), Query Frame = 1 Query: 1 IWQPPVNTTWQWQIQFQVNTSFDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNVYAEIMYGVDAGVDVTADQQLDYNTFLATE 438 IW P TTWQWQ+ ++TS DV MYD A D ++A G VICYFSAG+ EDWRDDA FP AALG PL W GE W+D N GVRDVM ARLDLA + CDGVEPDNV Y + G +TA QLDYN FLA E Sbjct: 299 IWVPAPGTTWQWQLTGTIDTSLDVAMYDIDLFDAPQAKIDTLRAAGKKVICYFSAGSSEDWRDDASKFPAAALGNPLDGWPGERWLDTRNAGVRDVMKARLDLAVQRRCDGVEPDNVDG---YTNNPGFPLTAATQLDYNRFLAAE 441
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: A0A3N2QLE3_9GAMM (Endo alpha-1,4 polygalactosaminidase n=2 Tax=Marinobacter TaxID=2742 RepID=A0A3N2QLE3_9GAMM) HSP 1 Score: 156 bits (394), Expect = 1.530e-44 Identity = 78/145 (53.79%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 4 WQPPVNTTWQWQIQFQVNTSFDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNVYAEIMYGVDAGVDVTADQQLDYNTFLATE 438 +QP TWQWQ+Q V+T +DV++YD + + I+A G VICYFSAG+ E+WRDDAGDF A LG L W+GE W+D+ NE VR++MAARLDLAA KGCDGVEPDN+ Y D G D TA QL YN ++A E Sbjct: 44 YQPVPLATWQWQLQGTVDTDYDVEIYDIDLFDSDVSLIQSIQATGKKVICYFSAGSYENWRDDAGDFEAADLGNSLDGWDGERWLDIRNENVREIMAARLDLAADKGCDGVEPDNMDG---YTNDPGFDFTAADQLAYNRWIANE 185
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Match: UPI001401EBF7 (endo alpha-1,4 polygalactosaminidase n=2 Tax=Marinobacter TaxID=2742 RepID=UPI001401EBF7) HSP 1 Score: 156 bits (394), Expect = 1.530e-44 Identity = 77/143 (53.85%), Postives = 96/143 (67.13%), Query Frame = 1 Query: 4 WQPPVNTTWQWQIQFQVNTSFDVDMYDXXXXXVETATFDEIKAKGSAVICYFSAGTREDWRDDAGDFPEAALGEPLGDWEGEMWVDVNNEGVRDVMAARLDLAAAKGCDGVEPDNVYAEIMYGVDAGVDVTADQQLDYNTFLA 432 +QP TTWQWQ+Q VN S+ V+MYD + + ++A G VICYFS G+ E+WRDDAG F +A LG L W+GE W+D+ N+ VRD+MAARLD+A KGCDGVEPDN+ Y D G DVTA QLDYN +LA Sbjct: 44 YQPVPLTTWQWQLQGTVNESYAVEMYDIDLFDADISVIQSLQASGKKVICYFSGGSYENWRDDAGAFDDADLGNALDGWDGERWLDIRNQNVRDIMAARLDVAVDKGCDGVEPDNMDG---YTNDPGFDVTAADQLDYNRWLA 183 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11070.965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11070.965.1 >prot_L-elsbetiae_contig11070.965.1 ID=prot_L-elsbetiae_contig11070.965.1|Name=mRNA_L-elsbetiae_contig11070.965.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp IWQPPVNTTWQWQIQFQVNTSFDVDMYDVDLFDVETATFDEIKAKGSAVIback to top mRNA from alignment at L-elsbetiae_contig11070:73..3723- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11070.965.1 ID=mRNA_L-elsbetiae_contig11070.965.1|Name=mRNA_L-elsbetiae_contig11070.965.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3651bp|location=Sequence derived from alignment at L-elsbetiae_contig11070:73..3723- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11070:73..3723- >mRNA_L-elsbetiae_contig11070.965.1 ID=mRNA_L-elsbetiae_contig11070.965.1|Name=mRNA_L-elsbetiae_contig11070.965.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig11070:73..3723- (Laminarionema elsbetiae ELsaHSoW15)back to top |