mRNA_L-elsbetiae_contig11063.962.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: A0A6H5L6J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J8_9PHAE) HSP 1 Score: 117 bits (293), Expect = 3.710e-25 Identity = 71/166 (42.77%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 1 LHFGASSNQVGAIDVLAEAGADIDAHGGEEWETPLHVASRLGQSEAVVALLRHGPDVDKLDGNGFSAIHIAAKGGSAATVQTLLAAGAEFNLRGGENDSTDLGLAXXXXXXXXXXXXIQHGASLSAANK-----------DGYTPVHVATFNNAVAAVHVLVGAGA 465 LH S+ Q G +D L EAGADID GGE ETPLH+A++LG SEAV +LL+ D +KL+G+ +SA+H+ AA V LLA GA+ NLRGGE+ T L LA +QH ASL+A +K G TP+H + A+ L+ GA Sbjct: 138 LHIAVSNEQAGVVDALVEAGADIDVQGGETCETPLHLATKLGSSEAVASLLKLEADENKLNGDQYSALHLXXXXXXAAIVHVLLATGAQPNLRGGEDGKTALDLAALGRHVEAATALVQHRASLNATDKLGRARVDARDQQGLTPLHSKSHEWCAEAIATLMKHGA 303
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: D8LJC1_ECTSI (Ankyrin repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC1_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 1.570e-18 Identity = 70/166 (42.17%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 1 LHFGASSNQVGAIDVLAEAGADIDAHGGEEWE--TPLHVASRLGQSEAVVALLRHGPDVDK---LDGNGFS---AIHIAAKGGSAATVQTLLAAGAEFNLRGGENDSTDLGLAXXXXXXXXXXXXIQHGASLSAANKDGYTPVHVATFNNAVAAVHVLVGAGADVD 474 LH A + VGAIDVL EAGA IDA GGE+ E TPLHVAS G SEA ++L++HG DV + + G S A+ +AA G V +LLAAG NLR +D + L A IQHGA + A + G T + + + A + LV AGA V+ Sbjct: 144 LHSAAIGDAVGAIDVLIEAGASIDAQGGEDGEMYTPLHVASEKGSSEAALSLVKHGADVHRSGRMSRWGRSCGNALILAAGRGHTMIVTSLLAAGVNVNLRPAYSDKSALDAAFQGGHADIVTTLIQHGAFVDATDSRGCTALFKVSHDTNAALIDKLVAAGASVN 309
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 2.510e-18 Identity = 76/164 (46.34%), Postives = 96/164 (58.54%), Query Frame = 1 Query: 1 LHFGASSNQVGAIDVLAEAGADIDAHGGEEWE--TPLHVASRLGQSEAVVALLRHGPDVDKLDGN----GFSAIHIAAKGGSAATVQTLLAAGAEFNLRGGENDSTDLGLAXXXXXXXXXXXXIQHGASLSAANKDGYTPVHVATFNNAVAAVHVLVGAGADVD 474 LH A + VGAIDVL EAGA IDA GGE+ TPLHVAS G SEA ++L++HG DV + +A+++AA G V +LLAAG NLR +D + L A XXXXXXXXX QHGA + A + G T + + N A + LV AGA V+ Sbjct: 213 LHSAAIGDAVGAIDVLIEAGASIDAQGGEDGARYTPLHVASEQGSSEAALSLVKHGADVHRSGKTCRRRRCNALNLAAGRGHTMIVTSLLAAGVNVNLRPAYSDKSALDAAFQGXXXXXXXXXXQHGAFVDATDSRGCTALFKVSHNTNAALIDKLVAAGASVN 376
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 2.850e-15 Identity = 62/163 (38.04%), Postives = 86/163 (52.76%), Query Frame = 1 Query: 1 LHFGASSNQVGAIDVLAEAGADIDAHGGEEWE--TPLHVASRLGQSEAVVALLRHGPDV------DKLDGNGFSAIHIAAKGGSAATVQTLLAAGAEFNLRGGENDSTDLGLAXXXXXXXXXXXXIQHGASLSAANKDGYTPVHVATFNNAVAAVHVLVGAGA 465 LH A+ + VGAI+ L EAGA+IDA GGE+ TPLH+AS G SEA ++L++H DV + + +A+ +AA G A V++LLAAG NLR + L A IQHGA + A + G T + + + A + LV AGA Sbjct: 187 LHSAATGDAVGAIETLMEAGANIDAQGGEDGARYTPLHMASEKGLSEAALSLVKHRADVHRSGKMSRRERKCCNALSLAAGRGHIAVVKSLLAAGVNVNLRPAYSGELALDAAFQGGHADIVTTLIQHGAFVDATDSRGCTALFKVSLDTNAALIDKLVAAGA 349
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: D7G744_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G744_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 6.250e-14 Identity = 71/158 (44.94%), Postives = 94/158 (59.49%), Query Frame = 1 Query: 13 ASSNQVGAIDVLAEAGADIDAHGG---EEWETPLHVASRLGQSEAVVALLRHGPDVDKLDG-NGFSAIHIAAKGGSAATVQTLLAAGAEFNLRGGENDSTDLGLAXXXXXXXXXXXXIQHGASLSAANKDGYTPVHVATFNNAVAAVHVLVGAGADVD 474 A ++VGAID L EAGA+I+ GG + TPLH+AS+ G SEA ++L++H DV +L G +SA+ +AA G A V+TLLAAGA NLR + L A XXXXXXXXXX A + A + G T + + N VA + LV A A V+ Sbjct: 176 AIGDKVGAIDTLIEAGANINVQGGKYDDARSTPLHMASKKGSSEAALSLVKHRADVHRLKGYERYSALRLAACSGHIAIVKTLLAAGANVNLRPAALCESALDSARSXXXXXXXXXXXXXXAIVDATDSRGRTALFNVSRENTVAVIDKLVAAWASVN 333
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: D7FHH2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH2_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 9.770e-14 Identity = 72/166 (43.37%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 1 LHFGASSNQVGAIDVLAEAGADIDAHGGEEWE--TPLHVASRLGQSEAVVALLRHGPDVDK------LDGNGFSAIHIAAKGGSAATVQTLLAAGAEFNLRGGENDSTDLGLAXXXXXXXXXXXXIQHGASLSAANKDGYTPVHVATFNNAVAAVHVLVGAGADVD 474 LH A + VGAI+ L EAGA I+A GG + TPLH+AS G S+A ++L++HG DV + + +A+++AA+ G A V+TLLAAGA NLR + + L XXXXXXXXXXXX A + A + G +P+H + + VA + LV AGA V+ Sbjct: 214 LHSAAMGDTVGAINALIEAGAKINAQGGTYGKRYTPLHMASERGSSKAALSLVKHGADVHRSGKVCSFGRDCSNALNLAARNGHTAIVKTLLAAGANANLRPAYSHHSALXXXXXXXXXXXXXXXXXXXAIVDATDPWGCSPLHKVSGESNVAVIDQLVAAGASVN 379
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: UPI001C049DCF (putative palmitoyltransferase ZDHHC13 isoform X2 n=2 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C049DCF) HSP 1 Score: 76.3 bits (186), Expect = 2.070e-11 Identity = 54/160 (33.75%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 1 LHFGASSNQVGAIDVLAEAGADIDAHGGEEWETPLHVASRLGQSEAVVALLRHGPDVDKLDGNGFSAIHIAAKGGSAATVQTLLAAGAEFNLRGGENDSTDLGLAXXXXXXXXXXXXIQHGASLSAANK-DGYTPVHVATFNNAVAAVHVLVGAGADVDA 477 LH+ A +N+ + GA +D GG+ TPLH A R G V+ LLR+G D+ DG G+ A+H+A A L+A G E + + + A I++ AS+SA +K + TP+H A V A H+L+ AGA VDA Sbjct: 110 LHWAAINNRSELVKYYMSKGAIVDQLGGDLNSTPLHWAIRQGHLPMVIQLLRYGADLSLADGEGYHALHLAILFQHMAVAAYLMAKGQEVDGPDSNGQTPLMLAAQKIIGPEPTNFLIKNNASVSAVDKVNRNTPLHCAVLAGNVDAAHILLEAGASVDA 269
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: A0A6A4T8W1_SCOMX (Uncharacterized protein n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4T8W1_SCOMX) HSP 1 Score: 75.9 bits (185), Expect = 2.180e-11 Identity = 59/162 (36.42%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 1 LHFGASSNQVGAIDVLAEAGADIDAHGGEEWETPLHVASRLGQSEAVVALLRHGPDVDKLDGNGFSAIHIAAKGGSAATVQTLLAAGAEFNLRGGE-NDSTDLGLAXXXXXXXXXXXX-IQHGASLSAANK-DGYTPVHVATFNNAVAAVHVLVGAGADVDA 477 LH+ A +N+ + GA +D GG+ TPLH A R GQ V+ L+R+G D DG G+ A+H+A A L+A G E + G + N T L LA I++ AS+SA +K + TP+H A V A H+L+ AGA VDA Sbjct: 75 LHWAAINNRAELVKYYISKGAIVDQLGGDLNSTPLHWAIRQGQLPMVIQLMRYGADPSVADGEGYRALHLAILFQHMAIAAYLMAKGQEVD--GPDCNGQTPLMLAAQKIIGPEPTNFLIKNNASVSAVDKVNRNTPLHCAVLAGNVDAAHILLDAGASVDA 234
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: A0A8D3CUR8_SCOMX (Palmitoyltransferase n=1 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3CUR8_SCOMX) HSP 1 Score: 75.9 bits (185), Expect = 2.270e-11 Identity = 59/162 (36.42%), Postives = 82/162 (50.62%), Query Frame = 1 Query: 1 LHFGASSNQVGAIDVLAEAGADIDAHGGEEWETPLHVASRLGQSEAVVALLRHGPDVDKLDGNGFSAIHIAAKGGSAATVQTLLAAGAEFNLRGGE-NDSTDLGLAXXXXXXXXXXXX-IQHGASLSAANK-DGYTPVHVATFNNAVAAVHVLVGAGADVDA 477 LH+ A +N+ + GA +D GG+ TPLH A R GQ V+ L+R+G D DG G+ A+H+A A L+A G E + G + N T L LA I++ AS+SA +K + TP+H A V A H+L+ AGA VDA Sbjct: 57 LHWAAINNRAELVKYYISKGAIVDQLGGDLNSTPLHWAIRQGQLPMVIQLMRYGADPSVADGEGYRALHLAILFQHMAIAAYLMAKGQEVD--GPDCNGQTPLMLAAQKIIGPEPTNFLIKNNASVSAVDKVNRNTPLHCAVLAGNVDAAHILLDAGASVDA 216
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Match: D7G3P2_ECTSI (Similar to ankyrin 3, epithelial isoform e isoform 19 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P2_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 2.390e-11 Identity = 60/165 (36.36%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 1 LHFGASSNQVGAIDVLAEAGADIDAHGGEEWETPLHVASRLGQSEA-VVALLRHGPDVDKLDGNGFSAIHIAAKGGSAATVQTLLAAGAEFN---LRGG-ENDSTDLGLAXXXXXXXXXXXXIQHGASLSAAN-KDGYTPVHVATFNNAVAAVHVLVGAGADVDA 477 LH+ A +Q+G ID L EAGAD++A GG T LHVA+ SEA ++ALLRHG VD + + + +A K + + L++AGA+ LR E D+ LA + GA ++ DG TP+H+A + V VL+ AGAD A Sbjct: 220 LHYAAKHSQLGVIDALVEAGADLEAEGGLGVGTALHVAAEFPDSEATLLALLRHGAKVDPIRNGSETPLSVAVKARNVCAAKALVSAGADVREHLLRESVECSQHDMLLAL-----------LGRGAHVNTKGASDGNTPLHLAAEKSFRVKVDVLLQAGADETA 373 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11063.962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11063.962.1 >prot_L-elsbetiae_contig11063.962.1 ID=prot_L-elsbetiae_contig11063.962.1|Name=mRNA_L-elsbetiae_contig11063.962.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=368bp LHFGASSNQVGAIDVLAEAGADIDAHGGEEWETPLHVASRLGQSEAVVALback to top mRNA from alignment at L-elsbetiae_contig11063:5234..6337+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11063.962.1 ID=mRNA_L-elsbetiae_contig11063.962.1|Name=mRNA_L-elsbetiae_contig11063.962.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1104bp|location=Sequence derived from alignment at L-elsbetiae_contig11063:5234..6337+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11063:5234..6337+ >mRNA_L-elsbetiae_contig11063.962.1 ID=mRNA_L-elsbetiae_contig11063.962.1|Name=mRNA_L-elsbetiae_contig11063.962.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2208bp|location=Sequence derived from alignment at L-elsbetiae_contig11063:5234..6337+ (Laminarionema elsbetiae ELsaHSoW15)back to top |