mRNA_L-elsbetiae_contig11063.961.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11063.961.1 vs. uniprot
Match: D7FJ89_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ89_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.420e-27 Identity = 58/92 (63.04%), Postives = 71/92 (77.17%), Query Frame = 2 Query: 65 QRLRSILRGSEDTIFDLVCSRTTLEQWAEWLQAPLEHAIVVGNANLLAKLQAAGARANAVHPAVRGGQEALVLELLRLGASPTEPDEDGDTP 340 +RLR+IL G+E IFDL+C+ ++EQWAEWL+ PLEHA+ G +L+ +L AGA AVH AVR GQEA+V ELLRLGASP EPDE GDTP Sbjct: 14 ERLRTILTGAEAAIFDLICAGASIEQWAEWLRTPLEHAVAAGKMDLVVQLAQAGAGGIAVHSAVRRGQEAVVAELLRLGASPGEPDESGDTP 105
BLAST of mRNA_L-elsbetiae_contig11063.961.1 vs. uniprot
Match: D7FJ34_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ34_ECTSI) HSP 1 Score: 117 bits (293), Expect = 1.970e-27 Identity = 59/93 (63.44%), Postives = 72/93 (77.42%), Query Frame = 2 Query: 65 QRLRSILRGSEDTIFDLVCSRTTLEQWAEWLQAPLEHAIVVGNANLLAKLQAAGARANAVHPAVRGGQEALVLELLRLGASPTEPDEDGDTPL 343 Q LR+IL GSE IFDL+ T+++QWAEWL+ PLEHA+ G+ +L+ KL AGA +AVH AVR G EA+V ELLRLGASP+EPDE GDTPL Sbjct: 6 QNLRTILSGSEAAIFDLIFGTTSIQQWAEWLRTPLEHAVAEGDMDLVVKLAQAGASRSAVHLAVRQGHEAVVAELLRLGASPSEPDESGDTPL 98
BLAST of mRNA_L-elsbetiae_contig11063.961.1 vs. uniprot
Match: A0A6H5JW93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW93_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.280e-26 Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 65 QRLRSILRGSEDTIFDLVCSRTTLEQWAEWLQAPLEHAIVVGNANLLAKLQAAGARANAVHPAVRGGQEALVLELLRLGASPTEPDEDGDTP 340 +RLR+IL G+E IFDL+C+ ++E WAEWL+ PLEHA+ G +L+ +L AGA AVH AVR GQE +V ELLRLGASP EPDE GDTP Sbjct: 14 ERLRTILTGAEAAIFDLICAGASIEPWAEWLRTPLEHAVAAGKTDLVVQLAQAGAGGIAVHSAVRRGQEVVVAELLRLGASPGEPDESGDTP 105
BLAST of mRNA_L-elsbetiae_contig11063.961.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI) HSP 1 Score: 103 bits (258), Expect = 9.860e-23 Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 2 Query: 74 RSILRGSEDTIFDLVCSRTTLEQWAEWLQAPLEHAIVVGNANLLAKLQAAGARANAVHPAVRGGQEALVLELLRLGASPTEPDEDGDT 337 RS LRG+E TIFDLVC+ T QWAEWL+ PLEHA VGN +L+ KLQ AGA +A+H A+R GQ+AL ELLRLGA D +GDT Sbjct: 23 RSNLRGTEKTIFDLVCAGTNRRQWAEWLRTPLEHAAGVGNIDLVTKLQGAGAGGSALHLALRAGQDALAQELLRLGAPTKAKDNNGDT 110
BLAST of mRNA_L-elsbetiae_contig11063.961.1 vs. uniprot
Match: A0A6H5JN84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN84_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 4.000e-21 Identity = 51/86 (59.30%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 83 LRGSEDTIFDLVCSRTTLEQWAEWLQAPLEHAIVVGNANLLAKLQAAGARANAVHPAVRGGQEALVLELLRLGASPTEPDEDGDTP 340 LRG+E+TIFDLVC+ T+ QWAEWL+ PLEHA GN +L+ KLQ A A +A+H A+R GQ+AL ELLRLGA D +GDTP Sbjct: 26 LRGTEETIFDLVCAGTSKMQWAEWLRTPLEHAASAGNLDLVTKLQEAEAGGSALHLALRAGQDALARELLRLGAPTKAIDNNGDTP 111
BLAST of mRNA_L-elsbetiae_contig11063.961.1 vs. uniprot
Match: D7FJ91_ECTSI (Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ91_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 7.590e-9 Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 2 Query: 197 NLLAKLQAAGARANAVHPAVRGGQEALVLELLRLGASPTEPDEDGDTP 340 +L+ +L AGA AVH AVR GQEA+V ELLRLGASP EPDE GDTP Sbjct: 2 DLVVQLAQAGAGGVAVHSAVRRGQEAVVAELLRLGASPGEPDESGDTP 49
BLAST of mRNA_L-elsbetiae_contig11063.961.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 5.220e-8 Identity = 28/46 (60.87%), Postives = 35/46 (76.09%), Query Frame = 2 Query: 74 RSILRGSEDTIFDLVCSRTTLEQWAEWLQAPLEHAIVVGNANLLAK 211 R+ LRG+E+TIFDLVC+ T QWAEWL+ PLEHA GN +L+ K Sbjct: 24 RAKLRGTEETIFDLVCAGTNRMQWAEWLRTPLEHAAGAGNLDLVTK 69
BLAST of mRNA_L-elsbetiae_contig11063.961.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI) HSP 1 Score: 60.1 bits (144), Expect = 1.600e-7 Identity = 37/93 (39.78%), Postives = 48/93 (51.61%), Query Frame = 2 Query: 56 AEFQRLRSILRGSEDTIFDLVCSRTTLEQWAEWLQAPLEHAIVVGNANLLAKLQAAGARANA----------VHPAVRGGQEALVLELLRLGA 304 A F + L G+E+ +F LV T QWAEWL+APLEHA+ GN +L + L AGA A + AV+GG V LL G+ Sbjct: 2 ANFDERTAALGGTEEQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGS 94 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11063.961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11063.961.1 >prot_L-elsbetiae_contig11063.961.1 ID=prot_L-elsbetiae_contig11063.961.1|Name=mRNA_L-elsbetiae_contig11063.961.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp MASTQTSASNGLPTSVPAAEFQRLRSILRGSEDTIFDLVCSRTTLEQWAEback to top mRNA from alignment at L-elsbetiae_contig11063:4583..5081+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11063.961.1 ID=mRNA_L-elsbetiae_contig11063.961.1|Name=mRNA_L-elsbetiae_contig11063.961.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=499bp|location=Sequence derived from alignment at L-elsbetiae_contig11063:4583..5081+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11063:4583..5081+ >mRNA_L-elsbetiae_contig11063.961.1 ID=mRNA_L-elsbetiae_contig11063.961.1|Name=mRNA_L-elsbetiae_contig11063.961.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig11063:4583..5081+ (Laminarionema elsbetiae ELsaHSoW15)back to top |