mRNA_L-elsbetiae_contig11060.956.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11060.956.1
Unique NamemRNA_L-elsbetiae_contig11060.956.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: D8LEJ0_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ0_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 4.330e-96
Identity = 171/304 (56.25%), Postives = 199/304 (65.46%), Query Frame = 1
Query:    1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPENTKKGSENIE-----------KLWACDNAGVMFWEDLVGGWPDA-ISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876
            I+DEAHNVEGVCRDAGSLE+ LLDMVAMASDLCD  ++  C   A +LLKFVM LL F S+ESRTL+ FEN+T+F +P          E           K WACD+AG MFW   VG   DA  SHA L                                   +R+     PALNNLER + VTGL L +PHDY VNV SWDNV++ KLP HTR+S+ HA+CPL  SPFS + +VPAKM RLN+WL++PSVVFD++  Q HS+IL SGTLSPLHSLRAELGRSF ERLLPFPQQALEANHVI
Sbjct:   36 ILDEAHNVEGVCRDAGSLEVSLLDMVAMASDLCDCSQLTACSLGANLLLKFVMKLLYFTSKESRTLEAFENETDFEEPXXXXXXXXXXEVINTAVPALLKKHWACDSAGSMFWAAFVGPEEDASTSHASL-----------------------------------LRI-----PALNNLERFLFVTGLGLHHPHDYGVNVMSWDNVEKHKLPVHTRTSTRHASCPLGNSPFSRSSYVPAKMCRLNIWLMSPSVVFDEVPAQTHSVILTSGTLSPLHSLRAELGRSFGERLLPFPQQALEANHVI 299          
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 1.880e-92
Identity = 171/294 (58.16%), Postives = 199/294 (67.69%), Query Frame = 1
Query:    1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPEN--TKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876
            I+DEAHNVEGVCRDAGSLE+ LLDMVAMASDLCD  ++  C   A +LL+FVM LL F SRES TL+ FEN+T F +P +   KK  E IE+      AG                                               EGK  D MIRV M+MTPALNNLERV+ VTGLAL +PHDY+VNV SWDNV++ KLPAHTR+S+ HA+CPL  SPFS + +VPAKM RLN+WL++PSVVFD++  Q HS+IL SGTLSPLHSLRAELGRSF ERLLPFPQQALEANHVI
Sbjct:  382 ILDEAHNVEGVCRDAGSLEVSLLDMVAMASDLCDCSQLTACSLGANLLLEFVMKLLYFTSRESLTLEAFENETNFEEPPSGARKKQQEVIEEPEPAGGAGG----------------------------------------------EGK-GDEMIRVTMKMTPALNNLERVLFVTGLALNHPHDYSVNVMSWDNVEKHKLPAHTRTSTRHASCPLGNSPFSRSSYVPAKMCRLNIWLMSPSVVFDEVPAQTHSVILTSGTLSPLHSLRAELGRSFGERLLPFPQQALEANHVI 628          
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A2D4BU49_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU49_PYTIN)

HSP 1 Score: 80.5 bits (197), Expect = 3.310e-13
Identity = 85/296 (28.72%), Postives = 123/296 (41.55%), Query Frame = 1
Query:    1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRF----ASRESRTLQGFENQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876
            ++DEAHNVE  CR + S+EL L  +        ++ + G         LK +  L R+    AS  S  LQ                G E   K+W+  +   MF E         ++H        +L+   +   E++ QQ   E EEG EA            AL  +  V++V G   R+    N+       +  +K  +H RSS S +      S  S+        F+L +W L  +V F D+ RQ  S+IL SGTLSP+ S   ELG  F  RL        EA+HV+
Sbjct:  368 VLDEAHNVEDTCRSSASIELTLEGLALAILAFTNVIKKGNRPPCFLSQLKVLNGLHRWLKQIASSSSSVLQ--------------PTGFEXESKVWSGTDCIAMFAEYT------GMTHETYDAIREDLR--AVVDYEKQLQQTTTEGEEGGEAGDDSGGQRLPAAALTTIRSVLNVAGYMYRD----NLRYLDDFKLIVMKKRSHQRSSGSRSRGYNNMSSGSSEW-----EFKLCIWCLNAAVAFSDVVRQVRSVILTSGTLSPMDSFAGELGTEFPIRL--------EASHVV 624          
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A662WP93_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WP93_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.660e-12
Identity = 86/300 (28.67%), Postives = 131/300 (43.67%), Query Frame = 1
Query:    1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFE-NQTEFSDPENTKKGSENIEKLWACDNAGVMFWE------DLVGGWPDAISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRM-TPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876
            ++DEAHNVE  CR + S+EL    + A       + + G+   +  +LLK +  +       +R LQG   N      P     G E   K+W   +A  M  E      D VG   + +       A+ E +  L N  E+ QQQ E   +EG  A      ++ + + AL+ +E +++V     R+   Y         +D  KL    +S           SP  +++    ++ ++ LW L  +V F D+  QA S+IL SGTLSP+ S   ELG  F  RL        EANHV+
Sbjct:  380 VLDEAHNVEDTCRSSASVELTTDVLAAAIKAFSVVIKHGSRPTTYNMLLKLLNGI-------NRWLQGVNSNSRAILQP----SGFEEESKVWDGADALAMLAEYSGLTRDNVGAMKECVK------AVREYENELSNSGEQSQQQQESAPKEGDAAANPSGASVLLGSLALSTVESIMNVVDYMFRDESKY---------LDDFKLVV-IKSRVPWRGGGRFQSPNKSSNGNEWQL-KMCLWCLNAAVAFSDIVSQARSVILTSGTLSPMDSFAGELGTEFPIRL--------EANHVV 643          
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A5D6XRZ6_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRZ6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.160e-11
Identity = 88/301 (29.24%), Postives = 126/301 (41.86%), Query Frame = 1
Query:    1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFE-NQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMA-MSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAH-TRSSSSHAACPLRCSPFSAADFVPAKM------FRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876
            I DEAHNVE  CR + SLEL    + A +    ++ + G    +   LLK +  L        R LQG   N      P     G E   K+W   +A  MF E   G  P +++  +  +A ++E ++ L      +Q Q     E+G     M+   M     L+ +  VV+V     R+   Y         +D  KL    TR++        R     AAD            F++ +W L  +V F D+ + A S+IL SGTLSP+ S   ELG  F  RL        EANHV+
Sbjct:  423 IFDEAHNVEDTCRSSASLELTAELLGAASKAFTNVIKHGARPATYHSLLKVLNGL-------GRWLQGISANAGTVLRP----TGFEEESKVWNGVDALAMFTE-YTGLTPASLAAVKADLAAVAEHEKELSTTTSSDQSQPPSSAEQGGANPSMLLGTM----PLSTVRMVVNVADYMFRDDLKY---------LDDFKLIVRKTRTARGGXXXXXRFRGSYAADVKTTTNTNGGWEFKMCIWCLNAAVAFADVVKAARSVILTSGTLSPMDSFAGELGADFPIRL--------EANHVV 690          
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A3B4XF38_SERLL (BRCA1 interacting protein C-terminal helicase 1 n=3 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4XF38_SERLL)

HSP 1 Score: 74.3 bits (181), Expect = 3.990e-11
Identity = 76/297 (25.59%), Postives = 123/297 (41.41%), Query Frame = 1
Query:    1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPENTKKGSENIEKLW-ACDNAGVMFWEDLVGGWPDAISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLA-LRNPHDYNVNVT---SWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876
            ++DEAHN+E   R++ S  L   +++    +L  + +        + L  F  +L+ +       L              +++G E   K+W   D  G+     +  G  + +     ++   E + GL+N +E+     +V V           ++   +  L NL  V+D       R   DY V +    +W N    +LP     +      P      SA   V  ++  LN W L P+V F DL+   HS++L SGTLSP+ S  +ELG  FS +L        EANHVI
Sbjct:  385 VLDEAHNIEDCARESASYTLDRNNLLTCKDELDSMVKNKIRASKHEPLRNFCYSLINWIQESQGLL--------------SERGYETASKVWNGKDILGIFHDLGITAGTFNLLKQNLAAVLEKEERVGLVNGKED---MVQVPV-----------ISSASSTVLKNLFMVLDFLFRDNCRFAEDYRVALQRTYAWSN----QLPPDVPDAQGFLVRPRYRQRQSAR--VKTEVLTLNFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMGSFSSELGVKFSIQL--------EANHVI 639          
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: UPI00165A6B06 (Fanconi anemia group J protein n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165A6B06)

HSP 1 Score: 73.9 bits (180), Expect = 4.900e-11
Identity = 81/299 (27.09%), Postives = 127/299 (42.47%), Query Frame = 1
Query:    1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAM---SELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLA-LRNPHDYNVNVT---SWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876
            I+DEAHN+E   R++ S  LGL  +     +L  +        + + L  F   L+ +  +ES+ L              T++G +N  K+W+  +   +F    +G   D  S+ + S+A     E + GL+N +E+  Q              +  +       L NL  V+D       R   DY V +    +W N  Q+   AH     +     L          V  ++  L+ W L P+V F DL+   HS++L SGTLSP+ S  +ELG  F+ +L        EANHVI
Sbjct:  415 ILDEAHNIEDCARESASCSLGLASLQMSRDELDGMVNSNIRRSNHESLRDFCYALINWM-QESQVLL-------------TERGFDNASKVWSGKDILSIFHG--LGITADTFSNLKKSLAAVLEKEERAGLVNGKEDMVQ--------------VPTIGSSTATVLKNLFMVLDFLYRENSRFAEDYRVALQRSYAWTN--QVPPDAHD----AQGFLVLYRPRHRQTTRVKTEVLTLSFWCLNPAVAFSDLSGLVHSIVLTSGTLSPMGSFSSELGVKFTIQL--------EANHVI 669          
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A3Q2NMX5_FUNHE (BRCA1 interacting protein C-terminal helicase 1 n=6 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2NMX5_FUNHE)

HSP 1 Score: 73.9 bits (180), Expect = 5.570e-11
Identity = 81/299 (27.09%), Postives = 127/299 (42.47%), Query Frame = 1
Query:    1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAM---SELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLA-LRNPHDYNVNVT---SWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876
            I+DEAHN+E   R++ S  LGL  +     +L  +        + + L  F   L+ +  +ES+ L              T++G +N  K+W+  +   +F    +G   D  S+ + S+A     E + GL+N +E+  Q              +  +       L NL  V+D       R   DY V +    +W N  Q+   AH     +     L          V  ++  L+ W L P+V F DL+   HS++L SGTLSP+ S  +ELG  F+ +L        EANHVI
Sbjct:  416 ILDEAHNIEDCARESASCSLGLASLQMSRDELDGMVNSNIRRSNHESLRDFCYALINWM-QESQVLL-------------TERGFDNASKVWSGKDILSIFHG--LGITADTFSNLKKSLAAVLEKEERAGLVNGKEDMVQ--------------VPTIGSSTATVLKNLFMVLDFLYRENSRFAEDYRVALQRSYAWTN--QVPPDAHD----AQGFLVLYRPRHRQTTRVKTEVLTLSFWCLNPAVAFSDLSGLVHSIVLTSGTLSPMGSFSSELGVKFTIQL--------EANHVI 670          
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A095A2L4_SCHHA (Fanconi anemia group J protein-like protein n=1 Tax=Schistosoma haematobium TaxID=6185 RepID=A0A095A2L4_SCHHA)

HSP 1 Score: 68.9 bits (167), Expect = 1.030e-10
Identity = 40/70 (57.14%), Postives = 42/70 (60.00%), Query Frame = 1
Query:  670 FVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVIT 879
            FV  K   LN W L PSVVF  LA  AH +ILMSGTLSPL SL AEL   F  RL        EANHVI+
Sbjct:   22 FVENKELSLNFWCLNPSVVFSQLASMAHCVILMSGTLSPLDSLEAELNVQFPLRL--------EANHVIS 83          
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A024G3T4_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3T4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.240e-10
Identity = 70/299 (23.41%), Postives = 129/299 (43.14%), Query Frame = 1
Query:    1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQ----GFENQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAM-SELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFS--AADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876
            ++DEAHNVE +CR + S E+    +         +  +    ++   LL  +    R+    S T++    GFE ++                 +W+  +A  MF ++  G   D +S  + ++ +  E ++ L+  ++      +    + K ++ ++R       AL  +E ++ V     R+   Y       D+   L   +  +  +   +   R +P     ++      FR+ +W L+ +VVF D+AR A ++IL SGTL+P+ S   ELG  F  RL        EANHV+
Sbjct:  378 VLDEAHNVEDICRSSASFEITKETLSVCIQSFTHVIEMAFRPEAYPSLLSILTGFARWMEMVSTTVKLKPTGFEEES----------------NVWSGSDAIAMF-DEYAGMNQDNLSSFQSALQLVHEHEKMLMQVEKGSGNDVDHNSAQSKSSEVLLR-----PIALKTMETILCVASFMFRDKFKY------LDDFQLLFFKSRAQKGTKDMSANNRLAPRDERGSEKPAGWQFRIAIWCLSGAVVFADIARDARTVILTSGTLTPMDSFAGELGLDFGIRL--------EANHVV 640          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEJ0_ECTSI4.330e-9656.25Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5JZN2_9PHAE1.880e-9258.16Helicase ATP-binding domain-containing protein n=1... [more]
A0A2D4BU49_PYTIN3.310e-1328.72DNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A662WP93_9STRA2.660e-1228.67Helicase ATP-binding domain-containing protein n=2... [more]
A0A5D6XRZ6_9STRA2.160e-1129.24Helicase ATP-binding domain-containing protein n=1... [more]
A0A3B4XF38_SERLL3.990e-1125.59BRCA1 interacting protein C-terminal helicase 1 n=... [more]
UPI00165A6B064.900e-1127.09Fanconi anemia group J protein n=1 Tax=Fundulus he... [more]
A0A3Q2NMX5_FUNHE5.570e-1127.09BRCA1 interacting protein C-terminal helicase 1 n=... [more]
A0A095A2L4_SCHHA1.030e-1057.14Fanconi anemia group J protein-like protein n=1 Ta... [more]
A0A024G3T4_9STRA1.240e-1023.41Helicase ATP-binding domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11060contigL-elsbetiae_contig11060:217..5435 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score312.8
Seed ortholog evalue1.7e-82
Seed eggNOG ortholog2880.D8LEJ0
KEGG koko:K11136,ko:K15362
KEGG Pathwayko03440,ko03460,map03440,map03460
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATP-dependent DNA helicase activity
EggNOG OGsCOG1199@1,KOG1132@2759
EC3.6.4.12
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Exons7
Model size881
Cds size879
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815321.0900652-CDS-L-elsbetiae_contig11060:216..3411622815321.0900652-CDS-L-elsbetiae_contig11060:216..341Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 217..341 +
1691682837.083198-CDS-L-elsbetiae_contig11060:216..3411691682837.083198-CDS-L-elsbetiae_contig11060:216..341Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 217..341 +
1622815321.1001556-CDS-L-elsbetiae_contig11060:1210..13491622815321.1001556-CDS-L-elsbetiae_contig11060:1210..1349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 1211..1349 +
1691682837.0985034-CDS-L-elsbetiae_contig11060:1210..13491691682837.0985034-CDS-L-elsbetiae_contig11060:1210..1349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 1211..1349 +
1622815321.1115346-CDS-L-elsbetiae_contig11060:2240..23361622815321.1115346-CDS-L-elsbetiae_contig11060:2240..2336Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 2241..2336 +
1691682837.1077576-CDS-L-elsbetiae_contig11060:2240..23361691682837.1077576-CDS-L-elsbetiae_contig11060:2240..2336Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 2241..2336 +
1622815321.1226668-CDS-L-elsbetiae_contig11060:2701..29521622815321.1226668-CDS-L-elsbetiae_contig11060:2701..2952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 2702..2952 +
1691682837.11704-CDS-L-elsbetiae_contig11060:2701..29521691682837.11704-CDS-L-elsbetiae_contig11060:2701..2952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 2702..2952 +
1622815321.1372032-CDS-L-elsbetiae_contig11060:3550..36861622815321.1372032-CDS-L-elsbetiae_contig11060:3550..3686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 3551..3686 +
1691682837.1273882-CDS-L-elsbetiae_contig11060:3550..36861691682837.1273882-CDS-L-elsbetiae_contig11060:3550..3686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 3551..3686 +
1622815321.1469553-CDS-L-elsbetiae_contig11060:4597..47021622815321.1469553-CDS-L-elsbetiae_contig11060:4597..4702Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 4598..4702 +
1691682837.1365583-CDS-L-elsbetiae_contig11060:4597..47021691682837.1365583-CDS-L-elsbetiae_contig11060:4597..4702Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 4598..4702 +
1622815321.1571212-CDS-L-elsbetiae_contig11060:5406..54331622815321.1571212-CDS-L-elsbetiae_contig11060:5406..5433Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 5407..5433 +
1691682837.145698-CDS-L-elsbetiae_contig11060:5406..54331691682837.145698-CDS-L-elsbetiae_contig11060:5406..5433Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11060 5407..5433 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11060.956.1prot_L-elsbetiae_contig11060.956.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11060 217..5433 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11060.956.1

>prot_L-elsbetiae_contig11060.956.1 ID=prot_L-elsbetiae_contig11060.956.1|Name=mRNA_L-elsbetiae_contig11060.956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=293bp
IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLK
FVMNLLRFASRESRTLQGFENQTEFSDPENTKKGSENIEKLWACDNAGVM
FWEDLVGGWPDAISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEA
DGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLP
AHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQA
HSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVIT
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mRNA from alignment at L-elsbetiae_contig11060:217..5435+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11060.956.1 ID=mRNA_L-elsbetiae_contig11060.956.1|Name=mRNA_L-elsbetiae_contig11060.956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5219bp|location=Sequence derived from alignment at L-elsbetiae_contig11060:217..5435+ (Laminarionema elsbetiae ELsaHSoW15)
ATCGTAGACGAGGCACACAACGTGGAGGGCGTGTGCAGGGATGCGGGGTC CCTGGAGCTGGGCCTGCTGGACATGGTCGCCATGGCGTCGGACCTCTGCG ACCTCTGCCGGGTCGGCACGTGCGGGTGGGTGCGCAGGGCGCGCTCGTGT TGGCTCTCACCCTCTCTCTCTCTCTCCCCCCCCCTCTCTCCCTCTCTCCC TCTCTCTCTGTAACTATCTCGTGTGCTTTATGCGTTTGATCTGGTTTATG TGTGTGCGTATTTTGCCTCCTCTTGTGTGCCCATGTGCTGTGCGTGTGTG TGTGCGTGTGTGTGTATGTGTGCCTCGCTTCTTTCCTGCGTGCACACGAC CGTGCGTTTTTCGGCACTTGGTCCGCTTCTCCGAGTCGGTCTCCTGTGCT GTGTGCTGTGTGCTGTGTGTGTGTGTGTGTGTCTGTGTCTGTTTGCGAAG GCTCGCTCCTTTCTTGCGTGCACACGACCGTGCATTTTTCGGCACTTGAT CCGCTTCTCCGAGTCGGTCGCTGTAGGGTAACTTCGCTAGTTTGGTTGCC GCCCACTGGTGGTTGTACTCGTGCCTTTGTGTGTATTTACACCTGGGGCA AAGAGCGTGTAGTGGGGTGTAGGCGTGAGGTGGCTGGCCAAAAGACGCTG GCGCATCACGCCTCTCCAGCGATTACGGGCACGCACAGGTCTAGAAACAA TCACCTTATGGTCGTTTCGTTTCGTCAATGCATGCCGAAGGATGCAACCC GTTTACCTGCTGCGTGGTGAGAACACAGGAGTACCCTTCTTACCCGCTAA ATTGACGCGCTTTACTCCTGTACGTATATGTATGTATGTTTGTTTTGGGC AACTCGCCGCCGTTTCGCTCGGCTCGTGCCGAAAAATCCAAGAATCGGCG TCGGTTTCATCATGCCTGTCGTTGTTCACAACATGAAATTCTCGCCGCTC TTTTTTCTCGCGCTCGGGATCGTGATCGCTGCTGCATAAAACAGCCAGAG CGCGCAGGTGCTTCTCAAGTTCGTGATGAACCTCCTGCGATTCGCCTCGA GGGAGTCCCGAACACTGCAGGGCTTCGAGAACCAGACGGAGTTCTCTGAC CCAGAGAACACGAAGAAGGGCAGCGAGAATATTGTGAGAGAAGTGCCGGA ATATGTGTACCAAGGCAACAAGCACACCGCCGCAGCATTTAAAACAGTAT TTTTTAGACCCTCTCTGCGCACGCAGGCGCGGGCCCTCTCTCTTGGTCTC CGAGGGTCCGTCCGCCCTGCCTTATTCGATCTCGCTCTCGCTCTCGCTCT CCCGTGTGTGCCGAACACTTTTGAGCGATGAGGCCTATATAATTTTCAGA TAAAAAACCGATTGATGTCGAGGCCAAGCATGGCCCCTTGACGCTTTGCA AGAACAGCAGTAGATATGTAGGATGCAAGCTTGTTGCGCCGCCGCACCCT CCTTCGTGCGACCTGGGGAGCGAAGCTTCTTCTTCCGTAGACTGCATACT TCCTGCTGTAAACGGCATGTATTGTAGGATTTTTCTGGCGCCATACAGCA TGCGCCCCCCAACTTTCTGTAAAGAACGCGAGAGCCGCAGGTCGAGTCTG AAATCAAGCGTGGGAGGCGCGCTGCAACACATGCATGTGTGTACACTATT GGCGGTCTTGTTAATTTGCCTTTATTATGACAGCACGCTCATATCGCACG TGTGCGCGCTATAATATGTACCTGTCGTTATTTCACTAGCGGTGACGAAC AAAGCCAAGCGACACTGCAGCGCGCCACCCCAGCAGCAATCGCTTGTAAC CGCATCTACATAAATACATGTGTATTATGTAGGCCTGGGGCAATTTATTC GCGATTGTCTGCGCGTGCTTTTGTGTTAAGCTACATAGCTCCTGGGTAAC CACGCCCATCCACCCACCCACCCACCCACCCACCACGAAAACCAATGAAT GAATAATTTCCTACGCCCGACTCGCCCCCCACTTTTCGACTTACGCCTCG TTTCTCGCTCGTCCGCTCCACCAGGAGAAGCTCTGGGCGTGCGACAACGC CGGCGTCATGTTCTGGGAGGACCTGGTGGGGGGGTGGCCCGACGCGATCT CGCACGCTGAGCTGTCGATGGTGGGGTTTTGTGTGGCGTGGCGTGGTGTG TGTATGTATGTGTGTGTGTATGTGTGTGTGTGTTTTCCCTCCCATTTTTG GCTTATTCGTCGTCTGCCCCACTGGCCCCCTTCCTCCACTACGACTAGCT AGACGACCCAACCGGGGTCACACAGGAGGCCCTTCCTGCGGTGCCGGCCT GTTATGTTTTCATCGCGAGTGGTGTGGTGTGTTGGCGTGGTTGTTGGGTA TCTTCTAACCCTTCCCCCCGCGCTCGCCGTCGCGCCGCCCCTATATCTAG AGAAGATATCCTCTACATGAATACCCTCCCCCGCTCCACTCCTCCGTGGA AGCCAGCTCTAACCCTCCCCCCCCCTCATGACCAGGCGATGTCAGAGCTC AAGGAAGGCTTGCTCAACCCACAAGAAGAAGAGCAGCAGCAGGCAGAGGT AGAGGTCGAGGAGGGGAAGGAGGCCGACGGCATGATTCGAGTGAACATGC GCATGACCCCGGCGCTAAACAACCTGGAGAGGGTCGTCGACGTGACGGGG CTCGCGCTCCGCAACCCCCACGACTACAACGTAAACGTCACGTCCTGGGA TAACGTCGACCAGCTGAAGCTGCCGGCGCACACCAGGTGTGTGTTTGTGT GTGTGGGTGCGTGGGTGTGTGTGCGCGCGCGCTCCACATCCGCACTCAGA TAAAAGGATGATGTACGAAATGTATGTTATTTTGTGTGTGTGTGGGGGTC GTGTCGAAAGACAATGAGCCGGCCGCGTACCGAAAATGCTGATAATAGTG TGTTTGTGTTTTGTGACACATCACACAGAAGGAGAGAGAAAGAGACACAC ACACACACAAGTATAGATTTATTTTTGCGCTTTGTCGAGAACTACATCTA TACGTGTTTGCAACGACGCGGGCGACAAAATACAACCCACCAAACCTACA ACGTAGAAATGTAACATCGACTTACACGCGAGAGCTCGGGAAAACTTTCC CTCCCCTCCCGGCTCACATTTTCTTCACCCCTGTCGTTTTATTGCCCCCC TCCTCCTACTTTCCTCCTCCTGCTTTTCGCCCCCCCCCCCCCTCCCGTTT TATTTTTGTCAAAACGCACATAAAAAAATATAACGCGAAAACACTACATA CGTACATATATATGTGTGTACATACTCCATCCACGGCCGGCGCAACGCGG AACATGCCACGCGAAAACAAAAACATAACAACAGGTCGTCCAGCAGCCAC GCTGCGTGTCCGCTTCGGTGTTCGCCGTTCTCGGCGGCAGACTTCGTCCC CGCCAAGATGTTTCGGCTCAACCTCTGGCTCCTGACTCCCAGCGTCGTGT TCGACGATTTGGCCAGACAGGTAAATGGAGTTCCTGCTCTCGAGTACGGG GGGGCATGCGAAGCCTCCACCTGCACGGAATCACCACTTGTCAAGTAGCA GTAGTGGCAGCGTTAGTAGCAGCGCATGTAGTAATGGGTAGTATTTGTAA GTGGTAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAAGCAATTT CACCCTGTGGTTAAGAAGGCAGAAGGTGGTCCAGGTTTCGAAGAAAGCAT TTTGCGCCTGACACCTCTCTCGGGCGATTCCGAAGAAGCCGCTTTCTCTC TAAATATGTACTTGTAGCCCATTGGTTGCCACCACTCCTACCTCGAGCCT CCTCTTGGTCGCCGGTCCGTAACCGTGCCGGCAACGCAACGCCGGCCAAT CGCCCCACCACTCGTCCCACCAGTTGTCCCACCACTTGTCCCTCCAGTAG TCCCCCTAGTCGTCCCACCAGTCATCCCACCAGTTGTTCCACCAGTCGTC CCACCAGTCATCCCACCAGTCGTCGCACCAGTCGCCCCACCAGCTATCCC ACCAGTCATCCCACCAGTTGTCCTACCAGTTATCCCACCAGTCGTCCCAC CAGTCGTCCCCCAGTCGTCCCACCAATTGTCCCACCAGCAGTTGTCCTAC CAGTCGTCCCACAAGTCGTCCCACCAATCGTCCCACCAGTCGTCCCACCA GTCGCCCCACCAGTTGTCCCCCCAGTCGTCCCGCCAGTTGTCCCACCAGT TATCTCACCAGTCGCCCCACCAGTTGCCCCCCCAGTCGTCCCCCCAGTCG CCCCACCAGTTGCCCCACCAGTCGCCCCACCAATCGTCCCACCAGTCGTC CCACCAGTCCCTCTCTCCCTCCCTCCCTCCCTCCAACCATCGTTAAACGT TTGTCGGGACATGGGACGCGTCTTCAATCAGGCGCACTCGTTGATCCTGA TGAGCGGCACGCTTAGCCCCCTTCACTCCCTCAGGGCCGAGCTAGGGCGG TCGTTCAGCGAGCGCCTGCTGCCCTTCCCGCAACAGGTGAGAGGCACATA CACATGTACAAACGCCGCCTCTAAGACCGCTTCTGAGCAGCAGATCTATA AGGAGAAATGTTTTTGTGGTTTGTGAGGTAGACTGCCGTAGACTGGATGA CCCCATCCTGATGACGTTTTAAGGAGTTACACCGCAGAATCGTTACCCCC CCCCTTCCCCCCCAGCCGCCCGGTTACTTGCCGCTTCTCCTCTGCGCGCG GGCGAATCTACCCAGTGGCGGTCCGGTCCTTCCATCCATCCCACTTTTGT TAGCACGGCGTGTTTGCTTCTCTGGCCTGCTATCCGCTAACCCCTGGCTA CCGCGATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGTAGCAGCAGCAGCGGGCCGACCACCGGCCGACGGCGGA ATAAATCGTATCATTCTTGTCCTCCCGCCGCCCCTCATTTGCTTCCTTTT TGCTCCCTCCACCGCGCCTTCTACATGCGGCCGCGCGTCCGTCGTTTCTC TTTATTTACGTCAGGGTTTTGATGACCAAGCCCGACCGAACAACCCTGCT TGTTTTTTGCGCATCACAAAGCAAGATCAAAATCAATAGAACCACATATG TATGATGTGTACGTTTAACCTCTGAAAAGAATATGTAGTCATCCTGACCC GAATCTGCCGCGGTCCGCGCCGAATACAAACTACACTCAGGCCCTAGAGG CGAACCATGTGATCACGCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11060:217..5435+

>mRNA_L-elsbetiae_contig11060.956.1 ID=mRNA_L-elsbetiae_contig11060.956.1|Name=mRNA_L-elsbetiae_contig11060.956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1758bp|location=Sequence derived from alignment at L-elsbetiae_contig11060:217..5435+ (Laminarionema elsbetiae ELsaHSoW15)
ATCGTAGACGAGGCACACAACGTGGAGGGCGTGTGCAGGGATGCGGGGTC
CCTGGAGCTGGGCCTGCTGGACATGGTCGCCATGGCGTCGGACCTCTGCG
ACCTCTGCCGGGTCGGCACGTGCGGATCGTAGACGAGGCACACAACGTGG
AGGGCGTGTGCAGGGATGCGGGGTCCCTGGAGCTGGGCCTGCTGGACATG
GTCGCCATGGCGTCGGACCTCTGCGACCTCTGCCGGGTCGGCACGTGCGG
CCAGAGCGCGCAGGTGCTTCTCAAGTTCGTGATGAACCTCCTGCGATTCG
CCTCGAGGGAGTCCCGAACACTGCAGGGCTTCGAGAACCAGACGGAGTTC
TCTGACCCAGAGAACACGAAGAAGGGCAGCGAGAATATTCCAGAGCGCGC
AGGTGCTTCTCAAGTTCGTGATGAACCTCCTGCGATTCGCCTCGAGGGAG
TCCCGAACACTGCAGGGCTTCGAGAACCAGACGGAGTTCTCTGACCCAGA
GAACACGAAGAAGGGCAGCGAGAATATTGAGAAGCTCTGGGCGTGCGACA
ACGCCGGCGTCATGTTCTGGGAGGACCTGGTGGGGGGGTGGCCCGACGCG
ATCTCGCACGCTGAGCTGTCGATGGAGAAGCTCTGGGCGTGCGACAACGC
CGGCGTCATGTTCTGGGAGGACCTGGTGGGGGGGTGGCCCGACGCGATCT
CGCACGCTGAGCTGTCGATGGCGATGTCAGAGCTCAAGGAAGGCTTGCTC
AACCCACAAGAAGAAGAGCAGCAGCAGGCAGAGGTAGAGGTCGAGGAGGG
GAAGGAGGCCGACGGCATGATTCGAGTGAACATGCGCATGACCCCGGCGC
TAAACAACCTGGAGAGGGTCGTCGACGTGACGGGGCTCGCGCTCCGCAAC
CCCCACGACTACAACGTAAACGTCACGTCCTGGGATAACGTCGACCAGCT
GAAGCTGCCGGCGCACACCAGGCGATGTCAGAGCTCAAGGAAGGCTTGCT
CAACCCACAAGAAGAAGAGCAGCAGCAGGCAGAGGTAGAGGTCGAGGAGG
GGAAGGAGGCCGACGGCATGATTCGAGTGAACATGCGCATGACCCCGGCG
CTAAACAACCTGGAGAGGGTCGTCGACGTGACGGGGCTCGCGCTCCGCAA
CCCCCACGACTACAACGTAAACGTCACGTCCTGGGATAACGTCGACCAGC
TGAAGCTGCCGGCGCACACCAGGTCGTCCAGCAGCCACGCTGCGTGTCCG
CTTCGGTGTTCGCCGTTCTCGGCGGCAGACTTCGTCCCCGCCAAGATGTT
TCGGCTCAACCTCTGGCTCCTGACTCCCAGCGTCGTGTTCGACGATTTGG
CCAGACAGGTCGTCCAGCAGCCACGCTGCGTGTCCGCTTCGGTGTTCGCC
GTTCTCGGCGGCAGACTTCGTCCCCGCCAAGATGTTTCGGCTCAACCTCT
GGCTCCTGACTCCCAGCGTCGTGTTCGACGATTTGGCCAGACAGGCGCAC
TCGTTGATCCTGATGAGCGGCACGCTTAGCCCCCTTCACTCCCTCAGGGC
CGAGCTAGGGCGGTCGTTCAGCGAGCGCCTGCTGCCCTTCCCGCAACAGG
CGCACTCGTTGATCCTGATGAGCGGCACGCTTAGCCCCCTTCACTCCCTC
AGGGCCGAGCTAGGGCGGTCGTTCAGCGAGCGCCTGCTGCCCTTCCCGCA
ACAGGCCCTAGAGGCGAACCATGTGATCACGGCCCTAGAGGCGAACCATG
TGATCACG
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