mRNA_L-elsbetiae_contig11060.956.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: D8LEJ0_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ0_ECTSI) HSP 1 Score: 312 bits (799), Expect = 4.330e-96 Identity = 171/304 (56.25%), Postives = 199/304 (65.46%), Query Frame = 1 Query: 1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPENTKKGSENIE-----------KLWACDNAGVMFWEDLVGGWPDA-ISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876 I+DEAHNVEGVCRDAGSLE+ LLDMVAMASDLCD ++ C A +LLKFVM LL F S+ESRTL+ FEN+T+F +P E K WACD+AG MFW VG DA SHA L +R+ PALNNLER + VTGL L +PHDY VNV SWDNV++ KLP HTR+S+ HA+CPL SPFS + +VPAKM RLN+WL++PSVVFD++ Q HS+IL SGTLSPLHSLRAELGRSF ERLLPFPQQALEANHVI Sbjct: 36 ILDEAHNVEGVCRDAGSLEVSLLDMVAMASDLCDCSQLTACSLGANLLLKFVMKLLYFTSKESRTLEAFENETDFEEPXXXXXXXXXXEVINTAVPALLKKHWACDSAGSMFWAAFVGPEEDASTSHASL-----------------------------------LRI-----PALNNLERFLFVTGLGLHHPHDYGVNVMSWDNVEKHKLPVHTRTSTRHASCPLGNSPFSRSSYVPAKMCRLNIWLMSPSVVFDEVPAQTHSVILTSGTLSPLHSLRAELGRSFGERLLPFPQQALEANHVI 299
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE) HSP 1 Score: 309 bits (791), Expect = 1.880e-92 Identity = 171/294 (58.16%), Postives = 199/294 (67.69%), Query Frame = 1 Query: 1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPEN--TKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876 I+DEAHNVEGVCRDAGSLE+ LLDMVAMASDLCD ++ C A +LL+FVM LL F SRES TL+ FEN+T F +P + KK E IE+ AG EGK D MIRV M+MTPALNNLERV+ VTGLAL +PHDY+VNV SWDNV++ KLPAHTR+S+ HA+CPL SPFS + +VPAKM RLN+WL++PSVVFD++ Q HS+IL SGTLSPLHSLRAELGRSF ERLLPFPQQALEANHVI Sbjct: 382 ILDEAHNVEGVCRDAGSLEVSLLDMVAMASDLCDCSQLTACSLGANLLLEFVMKLLYFTSRESLTLEAFENETNFEEPPSGARKKQQEVIEEPEPAGGAGG----------------------------------------------EGK-GDEMIRVTMKMTPALNNLERVLFVTGLALNHPHDYSVNVMSWDNVEKHKLPAHTRTSTRHASCPLGNSPFSRSSYVPAKMCRLNIWLMSPSVVFDEVPAQTHSVILTSGTLSPLHSLRAELGRSFGERLLPFPQQALEANHVI 628
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A2D4BU49_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU49_PYTIN) HSP 1 Score: 80.5 bits (197), Expect = 3.310e-13 Identity = 85/296 (28.72%), Postives = 123/296 (41.55%), Query Frame = 1 Query: 1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRF----ASRESRTLQGFENQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876 ++DEAHNVE CR + S+EL L + ++ + G LK + L R+ AS S LQ G E K+W+ + MF E ++H +L+ + E++ QQ E EEG EA AL + V++V G R+ N+ + +K +H RSS S + S S+ F+L +W L +V F D+ RQ S+IL SGTLSP+ S ELG F RL EA+HV+ Sbjct: 368 VLDEAHNVEDTCRSSASIELTLEGLALAILAFTNVIKKGNRPPCFLSQLKVLNGLHRWLKQIASSSSSVLQ--------------PTGFEXESKVWSGTDCIAMFAEYT------GMTHETYDAIREDLR--AVVDYEKQLQQTTTEGEEGGEAGDDSGGQRLPAAALTTIRSVLNVAGYMYRD----NLRYLDDFKLIVMKKRSHQRSSGSRSRGYNNMSSGSSEW-----EFKLCIWCLNAAVAFSDVVRQVRSVILTSGTLSPMDSFAGELGTEFPIRL--------EASHVV 624
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A662WP93_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WP93_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.660e-12 Identity = 86/300 (28.67%), Postives = 131/300 (43.67%), Query Frame = 1 Query: 1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFE-NQTEFSDPENTKKGSENIEKLWACDNAGVMFWE------DLVGGWPDAISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRM-TPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876 ++DEAHNVE CR + S+EL + A + + G+ + +LLK + + +R LQG N P G E K+W +A M E D VG + + A+ E + L N E+ QQQ E +EG A ++ + + AL+ +E +++V R+ Y +D KL +S SP +++ ++ ++ LW L +V F D+ QA S+IL SGTLSP+ S ELG F RL EANHV+ Sbjct: 380 VLDEAHNVEDTCRSSASVELTTDVLAAAIKAFSVVIKHGSRPTTYNMLLKLLNGI-------NRWLQGVNSNSRAILQP----SGFEEESKVWDGADALAMLAEYSGLTRDNVGAMKECVK------AVREYENELSNSGEQSQQQQESAPKEGDAAANPSGASVLLGSLALSTVESIMNVVDYMFRDESKY---------LDDFKLVV-IKSRVPWRGGGRFQSPNKSSNGNEWQL-KMCLWCLNAAVAFSDIVSQARSVILTSGTLSPMDSFAGELGTEFPIRL--------EANHVV 643
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A5D6XRZ6_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRZ6_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 2.160e-11 Identity = 88/301 (29.24%), Postives = 126/301 (41.86%), Query Frame = 1 Query: 1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFE-NQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMA-MSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAH-TRSSSSHAACPLRCSPFSAADFVPAKM------FRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876 I DEAHNVE CR + SLEL + A + ++ + G + LLK + L R LQG N P G E K+W +A MF E G P +++ + +A ++E ++ L +Q Q E+G M+ M L+ + VV+V R+ Y +D KL TR++ R AAD F++ +W L +V F D+ + A S+IL SGTLSP+ S ELG F RL EANHV+ Sbjct: 423 IFDEAHNVEDTCRSSASLELTAELLGAASKAFTNVIKHGARPATYHSLLKVLNGL-------GRWLQGISANAGTVLRP----TGFEEESKVWNGVDALAMFTE-YTGLTPASLAAVKADLAAVAEHEKELSTTTSSDQSQPPSSAEQGGANPSMLLGTM----PLSTVRMVVNVADYMFRDDLKY---------LDDFKLIVRKTRTARGGXXXXXRFRGSYAADVKTTTNTNGGWEFKMCIWCLNAAVAFADVVKAARSVILTSGTLSPMDSFAGELGADFPIRL--------EANHVV 690
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A3B4XF38_SERLL (BRCA1 interacting protein C-terminal helicase 1 n=3 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4XF38_SERLL) HSP 1 Score: 74.3 bits (181), Expect = 3.990e-11 Identity = 76/297 (25.59%), Postives = 123/297 (41.41%), Query Frame = 1 Query: 1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPENTKKGSENIEKLW-ACDNAGVMFWEDLVGGWPDAISHAELSMAMSELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLA-LRNPHDYNVNVT---SWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876 ++DEAHN+E R++ S L +++ +L + + + L F +L+ + L +++G E K+W D G+ + G + + ++ E + GL+N +E+ +V V ++ + L NL V+D R DY V + +W N +LP + P SA V ++ LN W L P+V F DL+ HS++L SGTLSP+ S +ELG FS +L EANHVI Sbjct: 385 VLDEAHNIEDCARESASYTLDRNNLLTCKDELDSMVKNKIRASKHEPLRNFCYSLINWIQESQGLL--------------SERGYETASKVWNGKDILGIFHDLGITAGTFNLLKQNLAAVLEKEERVGLVNGKED---MVQVPV-----------ISSASSTVLKNLFMVLDFLFRDNCRFAEDYRVALQRTYAWSN----QLPPDVPDAQGFLVRPRYRQRQSAR--VKTEVLTLNFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMGSFSSELGVKFSIQL--------EANHVI 639
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: UPI00165A6B06 (Fanconi anemia group J protein n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165A6B06) HSP 1 Score: 73.9 bits (180), Expect = 4.900e-11 Identity = 81/299 (27.09%), Postives = 127/299 (42.47%), Query Frame = 1 Query: 1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAM---SELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLA-LRNPHDYNVNVT---SWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876 I+DEAHN+E R++ S LGL + +L + + + L F L+ + +ES+ L T++G +N K+W+ + +F +G D S+ + S+A E + GL+N +E+ Q + + L NL V+D R DY V + +W N Q+ AH + L V ++ L+ W L P+V F DL+ HS++L SGTLSP+ S +ELG F+ +L EANHVI Sbjct: 415 ILDEAHNIEDCARESASCSLGLASLQMSRDELDGMVNSNIRRSNHESLRDFCYALINWM-QESQVLL-------------TERGFDNASKVWSGKDILSIFHG--LGITADTFSNLKKSLAAVLEKEERAGLVNGKEDMVQ--------------VPTIGSSTATVLKNLFMVLDFLYRENSRFAEDYRVALQRSYAWTN--QVPPDAHD----AQGFLVLYRPRHRQTTRVKTEVLTLSFWCLNPAVAFSDLSGLVHSIVLTSGTLSPMGSFSSELGVKFTIQL--------EANHVI 669
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A3Q2NMX5_FUNHE (BRCA1 interacting protein C-terminal helicase 1 n=6 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2NMX5_FUNHE) HSP 1 Score: 73.9 bits (180), Expect = 5.570e-11 Identity = 81/299 (27.09%), Postives = 127/299 (42.47%), Query Frame = 1 Query: 1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQGFENQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAM---SELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLA-LRNPHDYNVNVT---SWDNVDQLKLPAHTRSSSSHAACPLRCSPFSAADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876 I+DEAHN+E R++ S LGL + +L + + + L F L+ + +ES+ L T++G +N K+W+ + +F +G D S+ + S+A E + GL+N +E+ Q + + L NL V+D R DY V + +W N Q+ AH + L V ++ L+ W L P+V F DL+ HS++L SGTLSP+ S +ELG F+ +L EANHVI Sbjct: 416 ILDEAHNIEDCARESASCSLGLASLQMSRDELDGMVNSNIRRSNHESLRDFCYALINWM-QESQVLL-------------TERGFDNASKVWSGKDILSIFHG--LGITADTFSNLKKSLAAVLEKEERAGLVNGKEDMVQ--------------VPTIGSSTATVLKNLFMVLDFLYRENSRFAEDYRVALQRSYAWTN--QVPPDAHD----AQGFLVLYRPRHRQTTRVKTEVLTLSFWCLNPAVAFSDLSGLVHSIVLTSGTLSPMGSFSSELGVKFTIQL--------EANHVI 670
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A095A2L4_SCHHA (Fanconi anemia group J protein-like protein n=1 Tax=Schistosoma haematobium TaxID=6185 RepID=A0A095A2L4_SCHHA) HSP 1 Score: 68.9 bits (167), Expect = 1.030e-10 Identity = 40/70 (57.14%), Postives = 42/70 (60.00%), Query Frame = 1 Query: 670 FVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVIT 879 FV K LN W L PSVVF LA AH +ILMSGTLSPL SL AEL F RL EANHVI+ Sbjct: 22 FVENKELSLNFWCLNPSVVFSQLASMAHCVILMSGTLSPLDSLEAELNVQFPLRL--------EANHVIS 83
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Match: A0A024G3T4_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G3T4_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.240e-10 Identity = 70/299 (23.41%), Postives = 129/299 (43.14%), Query Frame = 1 Query: 1 IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKFVMNLLRFASRESRTLQ----GFENQTEFSDPENTKKGSENIEKLWACDNAGVMFWEDLVGGWPDAISHAELSMAM-SELKEGLLNPQEEEQQQAEVEVEEGKEADGMIRVNMRMTPALNNLERVVDVTGLALRNPHDYNVNVTSWDNVDQLKLPAHTRSSSSHAACPLRCSPFS--AADFVPAKMFRLNLWLLTPSVVFDDLARQAHSLILMSGTLSPLHSLRAELGRSFSERLLPFPQQALEANHVI 876 ++DEAHNVE +CR + S E+ + + + ++ LL + R+ S T++ GFE ++ +W+ +A MF ++ G D +S + ++ + E ++ L+ ++ + + K ++ ++R AL +E ++ V R+ Y D+ L + + + + R +P ++ FR+ +W L+ +VVF D+AR A ++IL SGTL+P+ S ELG F RL EANHV+ Sbjct: 378 VLDEAHNVEDICRSSASFEITKETLSVCIQSFTHVIEMAFRPEAYPSLLSILTGFARWMEMVSTTVKLKPTGFEEES----------------NVWSGSDAIAMF-DEYAGMNQDNLSSFQSALQLVHEHEKMLMQVEKGSGNDVDHNSAQSKSSEVLLR-----PIALKTMETILCVASFMFRDKFKY------LDDFQLLFFKSRAQKGTKDMSANNRLAPRDERGSEKPAGWQFRIAIWCLSGAVVFADIARDARTVILTSGTLTPMDSFAGELGLDFGIRL--------EANHVV 640 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11060.956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11060.956.1 >prot_L-elsbetiae_contig11060.956.1 ID=prot_L-elsbetiae_contig11060.956.1|Name=mRNA_L-elsbetiae_contig11060.956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=293bp IVDEAHNVEGVCRDAGSLELGLLDMVAMASDLCDLCRVGTCGQSAQVLLKback to top mRNA from alignment at L-elsbetiae_contig11060:217..5435+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11060.956.1 ID=mRNA_L-elsbetiae_contig11060.956.1|Name=mRNA_L-elsbetiae_contig11060.956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5219bp|location=Sequence derived from alignment at L-elsbetiae_contig11060:217..5435+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11060:217..5435+ >mRNA_L-elsbetiae_contig11060.956.1 ID=mRNA_L-elsbetiae_contig11060.956.1|Name=mRNA_L-elsbetiae_contig11060.956.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1758bp|location=Sequence derived from alignment at L-elsbetiae_contig11060:217..5435+ (Laminarionema elsbetiae ELsaHSoW15)back to top |