mRNA_L-elsbetiae_contig1106.955.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: D8LG07_ECTSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG07_ECTSI) HSP 1 Score: 390 bits (1002), Expect = 2.310e-131 Identity = 192/229 (83.84%), Postives = 211/229 (92.14%), Query Frame = 3 Query: 144 KVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGPPAGKEKAWKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGSDEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEGGVILRASGIYGDRDVGPVTVPLGACMRPMEMLFNLAPFSRLRSVGPFEAILTPPVAVDNVSRVAAAGALGLVPNGVLLVDDINRLAKD 830 +V+VFGG+GFVGQNVCQAAL MGADVVSVNRSG P GK+KAWK VRWVQADIFKP+DYA ELSGAAGVVSCVGAFGSD+++EKICGDATV ATEAA+KA VE FVFISAAGAQH+H ++KGYWKGKQKAEKAILERFP+GGV+LRA GIYGDRDVGPVT+PLGA MRPMEMLFNLAPF+ +RS P EA+LTPPVAV+NVSRVAAAGALGLVP GVLLVDDINRLA D Sbjct: 9 QVIVFGGSGFVGQNVCQAALRMGADVVSVNRSGAPTGKDKAWKDKVRWVQADIFKPEDYAVELSGAAGVVSCVGAFGSDQQVEKICGDATVAATEAAEKADVERFVFISAAGAQHDHPVMKGYWKGKQKAEKAILERFPDGGVVLRAPGIYGDRDVGPVTIPLGALMRPMEMLFNLAPFAAVRSSSPLEAMLTPPVAVENVSRVAAAGALGLVPGGVLLVDDINRLATD 237
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: A0A835ZEQ4_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEQ4_9STRA) HSP 1 Score: 251 bits (642), Expect = 3.210e-76 Identity = 134/232 (57.76%), Postives = 163/232 (70.26%), Query Frame = 3 Query: 138 IPKVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGPPAGKEKAWKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGSDEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEGGVILRASGIYGDRDVGPVTVPLGACMRPMEMLFNLA-PFSRLRSVGPFEAILTPPVAVDNVSRVAAAGALGLVPNGVLLVDDINRLAKD 830 + +VVVFGG+GFVGQ+VCQAAL +G DVVS +RSG P + +W V+W++ DIFKP+DYAAEL GA GVV+CVGAFG+DE ME++CGDA V A EAA A V +FVF+SAAGA HLLL+GY+ GK KAE A+ +P+ GV LR IYGDR V V VPLGA P+E + +L PF+ LR PFEA TPP V V R AA ALG +L V+DINRLA D Sbjct: 75 MEQVVVFGGSGFVGQSVCQAALALGCDVVSFSRSGSPE-QAPSWASDVQWLKGDIFKPEDYAAELVGATGVVTCVGAFGTDEFMERVCGDANVAAAEAAAAARVPHFVFVSAAGAARAHLLLRGYYAGKAKAEAAVARLYPDTGVCLRPGAIYGDRVVRGVRVPLGAVFAPLERVLSLGGPFAALRD-SPFEAAFTPPADVRAVGRAAALAALGRADRALLSVEDINRLAAD 304
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: A0A4D9D7P2_9STRA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7P2_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.180e-61 Identity = 121/237 (51.05%), Postives = 154/237 (64.98%), Query Frame = 3 Query: 153 VFGGNGFVGQNVCQAALLMGADVVSVNRSGPPAGKEKAWKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGSDEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEG-GVILRASGIYGDRDVGPVTVPLGACMRPMEMLFNLAPFSRLRSVGP-FEAILTPPVAVDNVSRVAAAGALGLVP--------NGVLLVDDINRLAKDI 833 V GG+G+VGQ+V QAAL GAD VS+NRSG P +W V+WV ADIF + EL GA GVVSC+GAFGS+E MEKI GDA V A E A K V +FV++S LLKGY+ GK++AE+A+L FP G G++LR S +YG R VGP+++PL RP+E+LF PF LR P +A+L PPVAV V+ VAAAGA+G GVL VDDI R+A+++ Sbjct: 73 VLGGSGYVGQHVLQAALYRGADAVSINRSGIP-NTSGSWLSQVKWVAADIFNSSAWNKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMKVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPISLPLAVVGRPLELLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDTRVKAGEGAREGVLSVDDIVRVAREV 308
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: A0A1Y1HXQ8_KLENI (NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXQ8_KLENI) HSP 1 Score: 187 bits (476), Expect = 3.320e-51 Identity = 107/266 (40.23%), Postives = 161/266 (60.53%), Query Frame = 3 Query: 57 GVLAARVPRSFGLRAFSDSPSEPEDGDIP--------KVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGPPAGKEKAWKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGSDEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEGGVILRASGIYGDRDVGPVTVPLGACMRPMEMLFNLAPFSRLRSVGPFEAILTPPVAVDNVSRVAAAGALG-LVPNGVLLVDDINRLAK 827 G AA RS L + S SP + +P +++V GGNGFVG ++C+AA+ G V S+NRSGPP E +W V W++ ++F+P + L GV+SCVGAFGS E M+++CGDA VTA A + GV+ FVFISAA +L+GY++GK++AE+AI E+ P GG+I R S I+G+R VG +T+PLG P+E +F + + + ++ PP+ V+ +++ A A +VP G++ V I+RLA+ Sbjct: 87 GTEAADKARSASLPS-SSSPPQSAAKTVPASAPPVRDRLLVIGGNGFVGGHICKAAVEKGYKVSSLNRSGPPQHSE-SWVKHVDWIRGNVFEPPSWRHSLKDVQGVISCVGAFGSYETMKRVCGDANVTAVNTAAEEGVKRFVFISAADMGLPTFVLRGYFEGKREAERAIREKLPYGGIIFRPSFIHGNRRVGSLTLPLGLVGSPLEAIFKSSAGKWVHGLPLVGPLIVPPINVETLAKAAVLAAKNNVVPPGIMDVWQISRLAE 350
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: I0Z248_COCSC (NAD(P)-binding protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z248_COCSC) HSP 1 Score: 182 bits (463), Expect = 9.300e-51 Identity = 99/211 (46.92%), Postives = 131/211 (62.09%), Query Frame = 3 Query: 141 PKVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGPPAGKEKA-WKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGSDEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEGGVILRASGIYGDRDVGPVTVPLGACMRPMEMLFNLAPFSRLRSVGPFEAILTPPVAVDNVSRVAAAGA 770 PK+V+FGGNGFVG VC+ AL G VVSVNRSGPP K+ A W V WVQAD+F + +L GA GV+SC+GAFGS++ M+KICGD+ +T A AGV FIS +L GY++GK++AE+ + +FP+GGV LR IYG R+VG V +PLGA P++ + + P L V A PPV+V V++ A A Sbjct: 4 PKLVIFGGNGFVGSRVCEEALKTGLSVVSVNRSGPP--KQSADWVKGVEWVQADVFDVSSWRDQLKGAVGVISCLGAFGSNDFMQKICGDSNITVFNEAADAGVPRAAFISVHDYGFPGAVLPGYFQGKKRAEELLALKFPQGGVALRPGFIYGTRNVGGVGIPLGAIGYPLDKVLGVLPTKSLAGVPLLGAGFVPPVSVAAVAKAAVTAA 212
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: A0A7S2USW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USW7_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.670e-50 Identity = 111/252 (44.05%), Postives = 153/252 (60.71%), Query Frame = 3 Query: 93 LRAFSDSPSEPEDGDIPKVVVFGGNGFVGQNVCQAA-LLMGADVVSVNRSGPPA--GKEKAWKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGS-DEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEGGVILRASGIYGDRDVGP-VTVPLGACMRPMEMLFNLAPFSRLRSVGP-FEAILTPPVAVDNVSRVAAAGALG-LVPNGVLLVDDINRLAK 827 LR+ S S ++ + KVVV GGNG+VGQ VC+ A +M +VVS++RSG P G EK W + W + D+ + + L GA GVVSC+GAF S ++ ME GD + A + AK AGV NFVF+S +L GY+KGK++AE +LE FP+ GV+LR S +YG R VG +++PL +PM+M+F+ PF L S P +AIL PV V+ V AAAGA+ L G++ D+ RLAK Sbjct: 14 LRSLSTSSNQSTE---QKVVVLGGNGYVGQQVCKMAKTMMNCEVVSISRSGAPNFDGAEK-WTQEISWEKGDVLEASTWKDHLDGATGVVSCIGAFASTNDAMEYANGDTNIAAAKTAKAAGVANFVFVSTVENNLPEFVLAGYFKGKRRAEDQVLESFPQTGVVLRPSFVYGSRAVGKGISIPLWLVGKPMDMIFSTPPFEVLASTLPGAQAILAAPVPVETVGLCAAAGAVAKLGQTGIVSTKDMKRLAK 261
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: UPI001C4E58ED (uncharacterized protein At1g32220, chloroplastic-like isoform X1 n=2 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4E58ED) HSP 1 Score: 181 bits (459), Expect = 1.630e-49 Identity = 106/243 (43.62%), Postives = 151/243 (62.14%), Query Frame = 3 Query: 120 EPEDGDIP-----KVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGPPAGKEKAWKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGSDEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEGGVILRASGIYGDRDVGPVTVPLGACMRPMEMLFNLA-PFSRLRSVGPFEAILTPPVAVDNVSRVAAAGALGLV-PNGVLLVDDINRLAK 827 E E D+P K++V GGNGFVG +VC+ AL G V S++RSG + ++ +W +V W Q ++ PD + L+G V+SCVG FGS+ M KI G A + A AA + GV+ F++ISAA + LLKGY++GK+ AE +L RFP GGVILR ++G R VG V VPLG P+EM+ A P +++ VGP +LTPPV+V ++++VA A LV P G++ V I R ++ Sbjct: 45 EAETKDVPPPPTEKLLVLGGNGFVGSHVCKEALDRGLSVSSLSRSGRSSVQD-SWANSVVWHQGNLLSPDSWKDALNGVTAVISCVGGFGSNSHMYKINGTANINAVRAAAEQGVKRFIYISAADFGLVNYLLKGYYEGKRAAETELLTRFPYGGVILRPGFMHGTRQVGSVKVPLGVIGSPLEMVLQYAKPLTQVPLVGP---LLTPPVSVTSIAKVAVRAATDLVFPPGIVDVYGIQRYSQ 283
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: A0A388KKI2_CHABU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KKI2_CHABU) HSP 1 Score: 186 bits (473), Expect = 1.840e-49 Identity = 100/229 (43.67%), Postives = 147/229 (64.19%), Query Frame = 3 Query: 144 KVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGPPAGKEKAWKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGSDEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEGGVILRASGIYGDRDVGPVTVPLGACMRPMEMLFNLAPFSRLRSVGPFEAILTPPVAVDNVSRVAAAGAL-GLVPNGVLLVDDINRLAK 827 K+VVFGGNGFVG ++C+ AL G V SVNRSGPPA +++ W V WV+ D+F PD + +L A+GVVSC+G FG++++M +I G A V A +AA + V+ FV ISA ++L+GY++GK+ AE+A+ +FP GG+ILR I+G+R+VG +TVPL P+E + F+ ++ ++L PPV V++ A A +P G+L V INRLA+ Sbjct: 251 KLVVFGGNGFVGSHICREALSRGIHVTSVNRSGPPA-RQEPWLKEVEWVRGDVFDPDVWRMQLRDASGVVSCIGGFGTNDEMRRINGHANVKAVQAAAEEDVKRFVLISAHYFSVPAIILRGYYEGKRIAEEAVRSKFPYGGIILRPGFIHGNRNVGNLTVPLSVIGGPLEAVMRSRAFTWTSNLPIVGSVLLPPVKATAVAKAAVRAATDNAIPPGILDVWSINRLAE 478
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: A0A834LDI8_RHOSS (NAD(P)-bd_dom domain-containing protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834LDI8_RHOSS) HSP 1 Score: 179 bits (454), Expect = 9.500e-49 Identity = 111/262 (42.37%), Postives = 154/262 (58.78%), Query Frame = 3 Query: 51 STGVLAARVPRSFGLRAFSDSPSEPEDGDIPKVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGPPAGKEKAWKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGSDEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEGGVILRASGIYGDRDVGPVTVPLGACMRPMEMLFNLA-PFSRLRSVGPFEAILTPPVAVDNVSRVAAAGALGLV-PNGVLLVDDINRLAKD 830 STG P ++P P + K++V GGNGFVG +VC+ AL G V S++RSG P+ E AW V W Q D+ P+ L+G V+SCVG FGS+ M KI G A + A AA + GV+ +V+ISAA + LL+GY++GK+ AE ++ RFP GGVILR I+G R VG + +PLGA P+EM+ A P S++ VGP +LTPPV+V++V+RVA A V P G++ V I R ++ Sbjct: 32 STGPTKVEEPVQVDEAETVEAPPPPTE----KLLVLGGNGFVGSHVCREALKRGLTVSSLSRSGRPSVNE-AWAHEVFWHQGDLLLPESLKDALNGVTSVISCVGGFGSNSHMYKINGTANINAIRAAAEQGVKRYVYISAADFGFVNYLLQGYYEGKRAAETELMIRFPYGGVILRPGFIHGTRQVGSMKIPLGAIGSPLEMVLKHAKPLSQIPLVGP---LLTPPVSVNSVARVAVRAATDPVFPPGIVDVYGILRHSQQ 285
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Match: A0A5N6R5D1_9ROSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6R5D1_9ROSI) HSP 1 Score: 178 bits (452), Expect = 1.800e-48 Identity = 109/250 (43.60%), Postives = 149/250 (59.60%), Query Frame = 3 Query: 108 DSPSEPEDGD---IP-----KVVVFGGNGFVGQNVCQAALLMGADVVSVNRSGPPAGKEKAWKGTVRWVQADIFKPDDYAAELSGAAGVVSCVGAFGSDEKMEKICGDATVTATEAAKKAGVENFVFISAAGAQHEHLLLKGYWKGKQKAEKAILERFPEGGVILRASGIYGDRDVGPVTVPLGACMRPMEMLFNLA-PFSRLRSVGPFEAILTPPVAVDNVSRVAAAGALGLV-PNGVLLVDDINRLAK 827 D PS+ E+ + +P K++V GGNGFVG +VC+ AL G V S++RSG + + +W V W Q ++ PD + LSG V+SCVG FGS+ M KI G A + A AA + GV+ FV+ISAA + LL+GY++GK+ AE +L +FP GGVILR IYG R VG V +PLG PMEM+ A P ++L VGP + PPV+V VS+VA A V P G++ V I R ++ Sbjct: 38 DEPSKVEEAETVNVPPPPTEKLLVLGGNGFVGSHVCREALDRGLSVASLSRSGRSSIHD-SWANKVTWHQGNLLLPDSWREALSGVTSVISCVGGFGSNSYMYKINGTANINAIRAAAEQGVKRFVYISAADFGLVNYLLQGYYEGKRAAETELLTKFPYGGVILRPGFIYGTRSVGSVKIPLGVIGSPMEMVLKHAKPLTQLPLVGP---LFNPPVSVSAVSKVAVRAATDPVFPPGIIDVQGIQRYSQ 283 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1106.955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1106.955.1 >prot_L-elsbetiae_contig1106.955.1 ID=prot_L-elsbetiae_contig1106.955.1|Name=mRNA_L-elsbetiae_contig1106.955.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=268bp MLLLRRSTGVLAARVPRSFGLRAFSDSPSEPEDGDIPKVVVFGGNGFVGQback to top mRNA from alignment at L-elsbetiae_contig1106:21027..28270+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1106.955.1 ID=mRNA_L-elsbetiae_contig1106.955.1|Name=mRNA_L-elsbetiae_contig1106.955.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7244bp|location=Sequence derived from alignment at L-elsbetiae_contig1106:21027..28270+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1106:21027..28270+ >mRNA_L-elsbetiae_contig1106.955.1 ID=mRNA_L-elsbetiae_contig1106.955.1|Name=mRNA_L-elsbetiae_contig1106.955.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1608bp|location=Sequence derived from alignment at L-elsbetiae_contig1106:21027..28270+ (Laminarionema elsbetiae ELsaHSoW15)back to top |