mRNA_L-elsbetiae_contig1105.946.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: D8LMK8_ECTSI (Heat shock protein 33 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK8_ECTSI) HSP 1 Score: 268 bits (685), Expect = 4.520e-82 Identity = 132/147 (89.80%), Postives = 143/147 (97.28%), Query Frame = 1 Query: 1 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLLARSSDPSDLMGRGMTPVSIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYRLTAEDVTKELKLDP 441 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLP+A+EETEKTVINNIAKLLARSSDPSDLMGRGMTP+SIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLE+ EV+++V+K+E IEVKCEFCGK+YRL+AEDV KELKL P Sbjct: 271 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKTVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEVEELVKKEETIEVKCEFCGKLYRLSAEDVVKELKLTP 417
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: A0A6H5KBS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS9_9PHAE) HSP 1 Score: 269 bits (688), Expect = 1.990e-79 Identity = 133/151 (88.08%), Postives = 145/151 (96.03%), Query Frame = 1 Query: 1 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLLARSSDPSDLMGRGMTPVSIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYRLTAEDVTKELKLDPKKEP 453 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLP+A+EETEK VINNIAKLLARSSDPSDLMGRGMTP+SIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLE+ EV+++V+KDE IEVKCEFCGK+YRL+AEDV KELKL P ++P Sbjct: 559 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPEASEETEKAVINNIAKLLARSSDPSDLMGRGMTPISIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLEKTEVEELVKKDEAIEVKCEFCGKLYRLSAEDVVKELKLTPLQDP 709
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: A0A836CL44_9STRA (Heat shock protein Hsp33 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL44_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.700e-39 Identity = 74/134 (55.22%), Postives = 103/134 (76.87%), Query Frame = 1 Query: 1 ESEQK-SCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLLARSSDPSDLMGRGMTPVSIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYR 399 +S+Q S AI AG V ALVRQAGGY++ETLP A+EET K +N+A+L+A+ DP+ L+ GMTP +I E+LLEG+GG+ ++T +PE+ CHCS ERV+ AL+LL EV+D++ ++E IEVKCEFCG++YR Sbjct: 174 DSQQSDSVAIGAGVKVAGALVRQAGGYLMETLPGASEETIKQCADNVARLMAKGEDPAVLLADGMTPAAIAEALLEGVGGINSLTITKPEYKCHCSSERVFRALRLLGTEEVKDIMAREENIEVKCEFCGQLYR 307
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: A0A448ZMK1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMK1_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.150e-29 Identity = 67/146 (45.89%), Postives = 97/146 (66.44%), Query Frame = 1 Query: 1 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLLARSSD---PSDLMGRGMTPVSIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYRLTAEDVTKEL 429 ESEQ+SCA+AAG V L AGGY++E LP+AT ET V N+ KL+ + P+ L+ +G+TP+ I E++L+GLG V + PEF C CS +R+ AL+L+ R+EV +++E +E IE +CEFCG YR+ E++ KEL Sbjct: 240 ESEQRSCALAAGISVNGILCTAAGGYLIEQLPNATPETLSRVEKNLGKLVEKDGGNKLPTGLLLKGVTPLEIAETILDGLGMV-PLQQISPEFECKCSSDRLIRALRLIPRSEVDEILESEEKIEARCEFCGTTYRMGPEEIRKEL 384
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: A0A6V2EEP6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EEP6_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.820e-27 Identity = 61/142 (42.96%), Postives = 95/142 (66.90%), Query Frame = 1 Query: 1 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLLARSSD---PSDLMGRGMTPVSIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYRLTAEDV 417 ESEQ+SCA+AA V L AGGY++E LPD +EET K V N+A L+ + P+ L+ G+TP+ I E +L+GL + + P+ CHC++ER++ A++LL + EV D+++K+E IE +C+FCGK+YR+ ++V Sbjct: 240 ESEQRSCALAAATTVNGILCTSAGGYLVEQLPDCSEETMKRVETNLATLVEKDGTDKLPTGLLNTGVTPLEIAEIILDGLD-MKPLQQIEPKAACHCTEERLFRAVRLLPKEEVDDILKKEEQIEARCQFCGKVYRMGPDEV 380
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: A0A7S1ZBL5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBL5_TRICV) HSP 1 Score: 124 bits (311), Expect = 2.380e-27 Identity = 68/157 (43.31%), Postives = 104/157 (66.24%), Query Frame = 1 Query: 1 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLLARSSD----PSDLMGRGMTPVSIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYRLTAEDVT---KELKLDPKKE 450 ESEQ+SCA+AA V+ L + AGGY++E LPD +ET +TV N+A+L+ R P+ L+ G+TP+ I E +LEGLG + + P C CS+ER+ +L+LL RAEV++++ K+E IE +C+FCG++YR+ ++V +E K DP K+ Sbjct: 336 ESEQRSCALAAATSVSGILCKAAGGYLVERLPDCPDETMRTVEVNLARLVERDGTTDAVPTGLLLDGVTPLEIAEVVLEGLG-MEPLQQIEPRAKCRCSEERLLRSLRLLPRAEVEEILAKEEQIEARCQFCGRVYRMGPDEVRARMEEAKGDPSKD 491
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: B5Y5I8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5I8_PHATC) HSP 1 Score: 116 bits (291), Expect = 2.290e-25 Identity = 62/156 (39.74%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 1 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLLARSSD---PSDLMGRGMTPVSIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYRLTAEDVTKEL---KLDPKKE 450 ESEQ+SCA+AA + L AGGY++E LP ET V N+AKL+ + P++L+ G+TP+ + +L+GL + + +P +CHC+++R++ +L+LL + EV D++EK+E IE +C+FCGK+YR+ A ++ L K DP KE Sbjct: 206 ESEQRSCALAAATAMNGILCTAAGGYLIEQLPGVEPETIARVEQNLAKLVQKDGGDELPANLLLSGVTPLDMAAIILDGLD-MQPLQQIKPGLVCHCTEDRLFRSLRLLSKEEVDDILEKEEQIEARCQFCGKVYRMGAPEIRDRLAAAKGDPSKE 360
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: A0A1Z5JWD9_FISSO (Molecular chaperone Hsp33 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWD9_FISSO) HSP 1 Score: 110 bits (275), Expect = 3.620e-23 Identity = 57/146 (39.04%), Postives = 91/146 (62.33%), Query Frame = 1 Query: 1 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLLARSSD---PSDLMGRGMTPVSIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYRLTAEDVTKEL 429 ESEQ+SCA+AA V L AGGY++E LP + K V N+A+L+ P+ L+ +G TPV I ++L+GL + + P +C C+++R+ +L+LL R EV+D++ K++ IE +C+FCGK+YRL E++ + L Sbjct: 212 ESEQRSCALAAAVSVKGILCTSAGGYLIEQLPGVEPDVVKQVEKNLAQLVEMDGTGNLPTGLLLQGQTPVDIAATILDGLD-MKPLQQMEPVLVCQCTEDRLMRSLRLLPREEVEDILAKEQQIEARCQFCGKVYRLGKEEIEERL 356
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: A0A7S1FVS3_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVS3_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.400e-22 Identity = 63/158 (39.87%), Postives = 96/158 (60.76%), Query Frame = 1 Query: 1 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLLARSSD---PSDLMGRGMTPVSIVESLLEGLGG--VGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYRLTAEDVTKELKL---DPKKE 450 ESEQKSCA+AAG V L + AGGY++E LP +E K V N+ +L+ ++ P+ L+ GM P I ++LEG G +G I +R C CS+ER+ +++LL R E+ ++ + E +E KCEFCGK+YR+ ++V +L+ DP K+ Sbjct: 195 ESEQKSCALAAGVKVEGVLCQAAGGYLVEQLPGCRKEAAKKVQANLQRLVGKNGGDAVPAGLLRSGMEPADIAAAILEGTQGKALGQIEVRRT---CVCSEERLLRSIRLLPRHEIDHILMEHEKVEAKCEFCGKVYRMGPDEVRDKLEKATGDPSKQ 349
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Match: A0A7S2Y6B2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y6B2_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.810e-21 Identity = 56/151 (37.09%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 1 ESEQKSCAIAAGCFVTDALVRQAGGYMLETLPDATEETEKTVINNIAKLL-------ARSSD-----PSDLMGRGMTPVSIVESLLEGLGGVGAITYKRPEFLCHCSDERVYTALKLLERAEVQDMVEKDEVIEVKCEFCGKMYRLTAEDV 417 ESEQ+SCA+AA VT L + AGGY++E LPD + V N+AKL+ A +S+ P++L+ +G+TP+ IV+ +LEGL + + P C C++ R+ AL +L EV++++ K+E + +C FCG+ YR++ ++V Sbjct: 19 ESEQRSCALAAATVVTGVLCKAAGGYLIEQLPDVDPDVVARVEQNLAKLVEMNNAAAAETSEGTATLPTNLLLQGVTPLEIVQVVLEGLE-MKPLQQLDPVLQCECNEGRLLRALCMLPPDEVEELLVKEEELSARCHFCGRTYRMSPDEV 168 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1105.946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1105.946.1 >prot_L-elsbetiae_contig1105.946.1 ID=prot_L-elsbetiae_contig1105.946.1|Name=mRNA_L-elsbetiae_contig1105.946.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp MLETLPDATEETEKTVINNIAKLLARSSDPSDLMGRGMTPVSIVESLLEGback to top mRNA from alignment at L-elsbetiae_contig1105:6125..10217- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1105.946.1 ID=mRNA_L-elsbetiae_contig1105.946.1|Name=mRNA_L-elsbetiae_contig1105.946.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4093bp|location=Sequence derived from alignment at L-elsbetiae_contig1105:6125..10217- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1105:6125..10217- >mRNA_L-elsbetiae_contig1105.946.1 ID=mRNA_L-elsbetiae_contig1105.946.1|Name=mRNA_L-elsbetiae_contig1105.946.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=756bp|location=Sequence derived from alignment at L-elsbetiae_contig1105:6125..10217- (Laminarionema elsbetiae ELsaHSoW15)back to top |