mRNA_L-elsbetiae_contig110.904.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig110.904.1
Unique NamemRNA_L-elsbetiae_contig110.904.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: D8LB62_ECTSI (Metallo-beta-lactamase superfamily protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB62_ECTSI)

HSP 1 Score: 528 bits (1360), Expect = 7.890e-181
Identity = 266/323 (82.35%), Postives = 291/323 (90.09%), Query Frame = 1 
Query:  460 RVPFDERAVTGGGFFVAGAWSKAGVCSCFNIRHRHLLGKHGVVFDMGVCPSEVLHVQHVFVSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAAGMEKVRKAFEDVEGASIAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYRELNGKAIGALKKQGVDVSLSQERVEVVYTGDTVMDGLVSQPMVWEARLLIMEVTYLDGDGRAAAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGSHRNILRLLAAALPPTLTNKVSIALGEFGAPQHLSFLEDYVPGE--LSPQRFSRQDSQGREA 1422
            R  FDERA+TGGGFFVAGAWSKAGVCSCFN+RHRHLLGKHGVVFDMGVCPSEVLHV HVFVSHGHLDHCGAIVSHARLRALSQG PAKYYMGAELA+GMEKVRKAFE+VEGASIAMDIVAV PED +DLGQGCFVRPFLV+HRV+ALGFAL+R K +GLK EYR+L+G+ IGAL+K+GVDV  S E VEVVYTGDTVMDGLVSQP+VWEAR+LIMEVTYLDGDG AAAKNFH+H  DVLDN+D+L  VE+LVVAHVSERHGSHRN+LRLL+AALPP+  NKVS+ALGEFGA QHLSFLEDYV G    SP+R SR  S G EA
Sbjct:  266 RSAFDERAMTGGGFFVAGAWSKAGVCSCFNVRHRHLLGKHGVVFDMGVCPSEVLHVAHVFVSHGHLDHCGAIVSHARLRALSQGPPAKYYMGAELASGMEKVRKAFEEVEGASIAMDIVAVGPEDRVDLGQGCFVRPFLVKHRVDALGFALMRLKTDGLKHEYRQLDGREIGALRKRGVDVQSSHETVEVVYTGDTVMDGLVSQPLVWEARMLIMEVTYLDGDGSAAAKNFHVH--DVLDNMDRLRRVEQLVVAHVSERHGSHRNVLRLLSAALPPSFVNKVSVALGEFGASQHLSFLEDYVAGGEVSSPKRLSRGGSGGGEA 586
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BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: A0A4D9D594_9STRA (Lactamase_B domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D594_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.450e-54
Identity = 109/291 (37.46%), Postives = 170/291 (58.42%), Query Frame = 1 
Query:  496 GFFVAGAWSKAGVCSCFNIRHRHLLGKHGVVFDMGVCPSEVLHVQHVFVSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAAGMEKVRKAFEDVEGASIAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYRELNGKAIGALKKQGVDVSLSQERVEVVYTGDTVMDGLVSQPMVWEARLLIMEVTYLDGDGRAAAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGSHRNILRLLAAALPPT--LTNKVSIALGEFGAPQHLSFLEDY 1362
            GF ++ AWS AG+ +C  +RHR   G H +  D+G    E L   H+FVSHGH+DH GA+++HAR R LS   PAKYY+       + + + A+E ++G +   +IV VEP D   +     V  F  +HRV + G+A++R K++GLK   R L+   +   +KQG  V   ++ VEV YTGDT++  ++ QP+V +ARLLI+E TYL+G+   A    H+H+Q+++ +       ER+V  HVS ++    N+LR   + + P   L  K+ + L  FG  + +++L DY
Sbjct:   74 GFEISSAWSVAGIGTCIQLRHR-AFGLH-IAMDIGTSAGETLGAGHIFVSHGHIDHIGALLNHARARTLSNK-PAKYYVPVPATEPLLRAKAAYEALDGCAFNAEIVGVEPGDICRIHPNVRVEVFPTKHRVPSQGYAIIREKSKGLKAGCRNLSSHELARRRKQGESVVELEDIVEVAYTGDTILKAVLDQPLVRQARLLILECTYLEGEIVWAHSWHHVHMQEIVKHAAAFASNERVVCCHVSRKYKRWDNVLRCFQSGMAPVPALAAKIGVTLAGFGRTEPVTWLVDY 361
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BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: A0A7S3MEQ3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEQ3_9STRA)

HSP 1 Score: 193 bits (490), Expect = 3.670e-52
Identity = 113/290 (38.97%), Postives = 174/290 (60.00%), Query Frame = 1 
Query:  505 VAGAWSKAGVCSCFNIRHRHLLGKHG-VVFDMGVCPSEVLHVQHVFVSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAAGMEKVRKAFEDVEGASIAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYRELNGKAIGALKKQGVDV-SLSQERVEVVYTGDTVMDGLV---SQPMVWEARLLIMEVTYLDGDGRAAAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGSHRNILRLLAAALPPTLTNKVSIALGEFGAPQHLSFLED 1359
            V GAW+KAG+ SC  ++  +   KH   +FD G   SE +  ++VF+SHGH+DH G+ +SHAR R+LS G+ A+YY+  ++   ++  RKAFE ++ ++I M I+ V P D    G    V+ F   HRV + G+A+  +K   L PE R L G  I  L+  G  + S   E +++VYTGDT + GL+   S   ++ +  LI+EVTYLDG+   A K  H+H++D+++N      VE LV  H+S+++   R + +LL   LP +L +KVS++L  FGA + L+ L D
Sbjct:   10 VTGAWTKAGIASCVRVQGSN---KHDDFLFDCGFLNSETILSKYVFISHGHIDHVGSCISHARARSLS-GSVAEYYVPRDIVKHLDDARKAFEKLDNSAIPMKIIGVGPGDTFTFGTNMKVKVFPTCHRVPSQGYAVYVKKKGELLPEMRGLTGAEIKELRMMGQAILSPDTEELQMVYTGDTTLSGLLQYDSSAFIFRSHTLIIEVTYLDGEKAKAEKYGHVHIEDIVENAHLFYEVEHLVFVHLSQKYSLSRAV-KLLRDQLPTSLLHKVSVSLHSFGATECLTRLTD 294
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BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: A0A835Z2Q2_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Q2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 5.500e-36
Identity = 97/290 (33.45%), Postives = 141/290 (48.62%), Query Frame = 1 
Query:  625 VQHVFVSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAAGMEKVRKAFEDVEGASIAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYREL------------------NGKAIGALKKQG--------------VDVSLSQERVEVVYTGDTVMDGLVSQPMVWEARLLIME-----------------VTYLDGDGRAAAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGSHRNILRLLAAALPPTLTNKVSIALGEFGAPQHLS 1347
            V+HVF++HGHLDHCGAI +HARLR            G +L     K + AFE++    + M+IV ++P + + +G GC+V PF   HRV + G+ +  R+  GLKPEY+ L                   G A GA +  G              V+V    + VEV +TGDT    L+ Q  +W A++LI+E                 +TYLDG    A K  H H+ +V  +  +  GV  L+  HV+ R  S  + +RLL  ALP  L  + S+ L  FGA + ++
Sbjct:    3 VEHVFITHGHLDHCGAIFTHARLR------------GRDLPPA--KAKGAFEELGEDELPMEIVPIQPGEEVSIGNGCYVAPFPTAHRVPSQGYIIRDRRPRGLKPEYQGLAAAALKELRAATARTRPAGGGAEGAARDNGXXXXXXXXXXXXAGVEVGQLTDTVEVAFTGDTSFAPLLEQEEIWRAKILILEDAPRYASAVTSARGRVAMTYLDGTLDGAVKWCHTHLSEVAASAHRFSGVRELIACHVTARK-SRFDAMRLLRKALPRDLAERTSVMLRLFGADEEVT 277
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BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: A0A482S4F0_9ARCH (Lactamase_B domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S4F0_9ARCH)

HSP 1 Score: 141 bits (356), Expect = 4.670e-35
Identity = 94/262 (35.88%), Postives = 144/262 (54.96%), Query Frame = 1 
Query:  640 VSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAAGMEKVRKAFEDVEGASIAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYRELNGKAIGALKKQGVD-VSLSQERVEVVYTGDTVMDGLVSQP--MVWEARLLIMEVTYLDGDGRAAAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGSHRNILRLLAAALPPTLTNKVSIALGEFGAPQHLSFLEDYVPGELSPQRFSRQDSQGR 1416
            +SHGH DH GA V HAR +ALS   PA YY+ + +   ++  R AFE ++G  I M+IVAV+P     +      +    QHRV + G+AL       L  EY+ L    +  LKK GV  V   +E +E+VYTGDT   GL++     +++A +LIME+TYLD D   A +  H+H+QD+++N D     +++V  H+S+R+    + L +L + LP  +  +  ++L  FGA + L+   D +P       +S   S GR
Sbjct:    2 ISHGHTDHIGAAVIHARAKALSS-TPATYYVPSAILEHLQAARAAFEAMDGGPIPMNIVAVDPGAEFMISPNIKAKVIQTQHRVPSQGYALYSISQPRLLEEYQGLPPNELRDLKKLGVKIVGEREEHLEMVYTGDTTFTGLLTPENRFIFDAPILIMELTYLDRDIAKAVQYGHVHIQDIVENADVFNN-DQIVFVHLSQRYNVS-SALSILRSNLPVEIAERAKVSLYSFGAREMLT---DILPRRRDS--YSSHSSSGR 255
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BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: UPI00065BD6AE (tRNase Z TRZ1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BD6AE)

HSP 1 Score: 135 bits (340), Expect = 2.330e-32
Identity = 89/275 (32.36%), Postives = 147/275 (53.45%), Query Frame = 1 
Query:  514 AWSKAGVCSCFNIRHRHLLGKHGVVFDMGVCPSEVLHVQHVFVSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAAGMEKVRKAFEDVEGASIAMDIVAVEP---EDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYRELNGKAIGALKKQGVDVSLSQERVEVVYTGDTVMDGLVSQPM--VWEARLLIMEVTYLDGD-----GRAAAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGSHRNILRLLAAALPPTLTNKVS 1308
            AWS +GV SC  I+   +     +VFDMGV   E +   +VF++HGH+DH GA+ +H   R L+   PA+Y++   L   ++ V KA  ++     A++ V V P    DC+ L    FV+ F   HR+ + G+ ++ ++ + LK EYR + G  + AL ++G ++       E+ YTGDTV D  ++ P   + + +LLI E T+LD +      + A    H H+ ++  N +  E VE +V+ H S ++   + I   +   LP +L NKV+
Sbjct:   42 AWSVSGVESCIVIKSEDV----HIVFDMGVAVPESVRGMNVFITHGHVDHIGAVANHVSKRGLNGMKPARYFVPPHLVDNLKSVTKAHYEMAETVEALENVKVLPFAEGDCVRLNSRFFVKTFPTVHRICSQGY-IVYKEEKRLKEEYRGMEGFEVAALHREGREIHEVSITPEIAYTGDTVFDIFLNPPNPDLLKVKLLITEATFLDDEIGKNMVQKARDRGHTHLCEIAQNAELFEDVEHIVLVHFSNKYPP-KYISDCIRDKLPLSLRNKVT 310
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BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: A0A7S2XUF8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUF8_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.020e-31
Identity = 72/193 (37.31%), Postives = 116/193 (60.10%), Query Frame = 1 
Query:  790 GASIAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYRELNGKAIGALKKQGVDVSLSQERVEVVYTGDTVMDGLVSQ----PMVWEARLLIMEVTYLD-GDGRAAAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGSHRNILRLLAAALPPTLTNKVSIALGEFGAPQHLSFL 1353
            G ++ +D+V VEP D + +G+G   + F  QHRV ++G+ L+  ++ GL PE++ L G  +G L+++GV ++      EV YTGDT +  L+      P+VW A++LI+E TYL  G+   A K+ H+H+QD++D  D ++  E +V+ H+S R+G    ++  L   LPP L  KV +AL  FG    L+ L
Sbjct:    3 GGALPVDLVGVEPGDEVAVGRGLTAQVFATQHRVPSVGYLLVSTRSGGLLPEFQGLPGPELGRLRREGVQITTQTRTTEVCYTGDTELACLLPPNEVAPLVWGAKMLILEATYLQPGEEELARKHKHVHIQDLIDARDLVQNDE-VVLFHISSRYG-RAEVISSLIECLPPELLPKVKVALKLFGEHDALTCL 193
[Close]
BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: W2Q9Z8_PHYPN (Lactamase_B domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=W2Q9Z8_PHYPN)

HSP 1 Score: 127 bits (319), Expect = 9.320e-30
Identity = 85/270 (31.48%), Postives = 141/270 (52.22%), Query Frame = 1 
Query:  463 VPFDERAVTGGGFFVAGAWSKAGVCSCFNIRHRHLLGKHGVVFDMGVCPSEVLHVQHVFVSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAAGMEKVRKAFEDVEG-ASIAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYRELNGKAIGALKKQGVDVSLSQERVEVVYTGDTVMDGLVSQPM------VWEARLLIMEVTYLDGDG--RAAAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGS 1245
             P + + V  GG+ +  A   AG+ SC  +          V FD+G     V++  HVF++HGH+DH GA+V+HA  RAL +  PA Y++ A LA  +E + ++   ++G A     IV ++  D + +     VR    +HRV +LG+ L  +K   LKPEYR+L G  I ALK+ G +++ ++   E+ YTGDT ++   +         + + ++LI E TY D     + A    H+H+  +  + +  + V  LV+ H S R+ +
Sbjct:    3 TPMNGKVVEAGGYTLH-ARCVAGIESCCYV------DSIDVAFDLGCLVGRVVNKSHVFITHGHVDHIGAVVAHAARRALQKQKPASYFVPAHLAPHLESILESTAAMQGDAPFPAKIVPLQAFDEVHISAKYLVRAVPTKHRVPSLGYILYEKKNR-LKPEYRQLPGAEIAALKRAGKEITSAELTPEIAYTGDTTIEAFTTAADDERTKDLLQVKVLITEATYTDSKMTIQDAVARGHMHLDQLAIHENLFQRVGTLVLVHFSARYSA 264
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BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: A0A2E7UUB6_9DELT (Lactamase_B domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E7UUB6_9DELT)

HSP 1 Score: 126 bits (316), Expect = 1.870e-29
Identity = 78/243 (32.10%), Postives = 127/243 (52.26%), Query Frame = 1 
Query:  589 FDMGVCPSEVLHVQHVFVSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAAGMEKVRKAFEDVEGASIAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYRELNGKAIGALKKQGVDVSLSQERVEVVYTGDTVMDGLVSQPMVWEARLLIMEVTYLDG--DGRAAAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGSHRNILRLLAAALPPTLTNKVSI 1311
            FD+GVCP   + ++ V  +H H+DH G++V H   R L    PA+Y +  E       V  A+  ++   +  D+ AV   +   L  G +   F   H + A G+ + R K + LKPEY+ L G+ I  L++ GV V   ++   + +TGD+  D +   P +  ARLL+ME+T+LD     R A K  H+H++D++  ++ LE  E ++  H+S R+  H     LL A LP     +V++
Sbjct:   30 FDIGVCPQSAIRLRTVLFTHAHIDHMGSVVQHCASRTLLGMKPARYVVPPEHLTAFHGVMDAWGQLDRTRLHYDVEAVGVGETTPLRSGHYATAFRAPHTMPAQGYVVYR-KNQKLKPEYQGLPGREIARLRRDGVAVVRREDVPLIAFTGDSTADVIDRVPDLRRARLLVMELTFLDDALSVRDARKRGHVHLEDLIPRLEHLEN-EHILFTHLSARY-PHGRANALLQAQLPEAWRGRVTL 269
[Close]
BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Match: G4ZQN2_PHYSP (Lactamase_B domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4ZQN2_PHYSP)

HSP 1 Score: 125 bits (313), Expect = 5.930e-29
Identity = 79/249 (31.73%), Postives = 129/249 (51.81%), Query Frame = 1 
Query:  583 VVFDMGVCPSEVLHVQHVFVSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAAGMEKVRKAFEDVEGAS-IAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNALGFALLRRKAEGLKPEYRELNGKAIGALKKQGVDVSLSQERVEVVYTGDTVMDGLVSQPM------VWEARLLIMEVTYLDGDGRA--AAKNFHIHVQDVLDNIDKLEGVERLVVAHVSERHGSHRNILRLLAAALPPTLTNK 1302
            V FD+G     V+   HVF++HGH+DH GA+V+HA  RAL +  PA+Y++ A L   +E + ++   ++G       +V ++  D + +     VR     HRV +LG+ L  ++   LK EYREL G  I ALK+ G  ++ ++   E+ YTGDT ++   +         +   ++LI E TY DG      A    H+H+  + ++    + V  LV+ H S R+ +  ++   +   LPPTL  K
Sbjct:   32 VAFDLGYLVDRVVSKSHVFITHGHVDHIGALVAHAARRALQKQKPAQYFVPAHLVPHLESILQSTAAMQGDEPFPAQLVPLQAYDEVHVSPKYMVRAVPTTHRVPSLGYILFEKRNR-LKSEYRELPGPEIAALKRSGQTITSAELTPEIAYTGDTTIEAFTAASDDERMRDLLRVKVLITEATYADGKMTVQDAVARGHMHLDQLAEHEHLFQRVGTLVLVHFSARYSAD-DLAECVRTRLPPTLQEK 278
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig110.904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB62_ECTSI7.890e-18182.35Metallo-beta-lactamase superfamily protein n=2 Tax... [more]
A0A4D9D594_9STRA2.450e-5437.46Lactamase_B domain-containing protein n=2 Tax=Mono... [more]
A0A7S3MEQ3_9STRA3.670e-5238.97Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A835Z2Q2_9STRA5.500e-3633.45Beta-lactamase-like protein n=1 Tax=Tribonema minu... [more]
A0A482S4F0_9ARCH4.670e-3535.88Lactamase_B domain-containing protein n=1 Tax=arch... [more]
UPI00065BD6AE2.330e-3232.36tRNase Z TRZ1 n=1 Tax=Aplysia californica TaxID=65... [more]
A0A7S2XUF8_9STRA2.020e-3137.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W2Q9Z8_PHYPN9.320e-3031.48Lactamase_B domain-containing protein n=19 Tax=Phy... [more]
A0A2E7UUB6_9DELT1.870e-2932.10Lactamase_B domain-containing protein n=1 Tax=Delt... [more]
G4ZQN2_PHYSP5.930e-2931.73Lactamase_B domain-containing protein n=3 Tax=Phyt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig110contigL-elsbetiae_contig110:43259..48217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score533.9
Seed ortholog evalue7.7e-149
Seed eggNOG ortholog2880.D8LB62
KEGG koko:K08257,ko:K17299
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG0504@2759
EC3.2.1.101
COG Functional cat.G
CAZyGH76
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00537,ko01000,ko04147
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-27_005090.1
Exons7
Model size1424
Cds size1422
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815316.3904545-CDS-L-elsbetiae_contig110:43259..433791622815316.3904545-CDS-L-elsbetiae_contig110:43259..43379Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 43260..43379 -
1691682834.2042897-CDS-L-elsbetiae_contig110:43259..433791691682834.2042897-CDS-L-elsbetiae_contig110:43259..43379Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 43260..43379 -
1622815316.402053-CDS-L-elsbetiae_contig110:43949..440841622815316.402053-CDS-L-elsbetiae_contig110:43949..44084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 43950..44084 -
1691682834.217234-CDS-L-elsbetiae_contig110:43949..440841691682834.217234-CDS-L-elsbetiae_contig110:43949..44084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 43950..44084 -
1622815316.413773-CDS-L-elsbetiae_contig110:44808..449921622815316.413773-CDS-L-elsbetiae_contig110:44808..44992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 44809..44992 -
1691682834.2251098-CDS-L-elsbetiae_contig110:44808..449921691682834.2251098-CDS-L-elsbetiae_contig110:44808..44992Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 44809..44992 -
1622815316.4226909-CDS-L-elsbetiae_contig110:45569..456651622815316.4226909-CDS-L-elsbetiae_contig110:45569..45665Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 45570..45665 -
1691682834.2361968-CDS-L-elsbetiae_contig110:45569..456651691682834.2361968-CDS-L-elsbetiae_contig110:45569..45665Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 45570..45665 -
1622815316.4313898-CDS-L-elsbetiae_contig110:46296..464211622815316.4313898-CDS-L-elsbetiae_contig110:46296..46421Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 46297..46421 -
1691682834.2473342-CDS-L-elsbetiae_contig110:46296..464211691682834.2473342-CDS-L-elsbetiae_contig110:46296..46421Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 46297..46421 -
1622815316.4409575-CDS-L-elsbetiae_contig110:46806..469531622815316.4409575-CDS-L-elsbetiae_contig110:46806..46953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 46807..46953 -
1691682834.2660382-CDS-L-elsbetiae_contig110:46806..469531691682834.2660382-CDS-L-elsbetiae_contig110:46806..46953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 46807..46953 -
1622815316.4508243-CDS-L-elsbetiae_contig110:47602..482171622815316.4508243-CDS-L-elsbetiae_contig110:47602..48217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 47603..48217 -
1691682834.2753673-CDS-L-elsbetiae_contig110:47602..482171691682834.2753673-CDS-L-elsbetiae_contig110:47602..48217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig110 47603..48217 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig110.904.1prot_L-elsbetiae_contig110.904.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig110 43260..48217 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig110.904.1

>prot_L-elsbetiae_contig110.904.1 ID=prot_L-elsbetiae_contig110.904.1|Name=mRNA_L-elsbetiae_contig110.904.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=474bp
RSCCPRDREKRKKKRKREGFLVYTVFCFYRRSDSCEEDKYLSACAAAVRT
HSSCWVSMLHSSSSSILRRAARKVVCLLLARPSSSYQNAVGRRGMAELTN
TILQRSNPHATGAETSPITTSQTKGAPSTTSLPTASTPSPKGTREDKTRG
GRGRVPFDERAVTGGGFFVAGAWSKAGVCSCFNIRHRHLLGKHGVVFDMG
VCPSEVLHVQHVFVSHGHLDHCGAIVSHARLRALSQGAPAKYYMGAELAA
GMEKVRKAFEDVEGASIAMDIVAVEPEDCIDLGQGCFVRPFLVQHRVNAL
GFALLRRKAEGLKPEYRELNGKAIGALKKQGVDVSLSQERVEVVYTGDTV
MDGLVSQPMVWEARLLIMEVTYLDGDGRAAAKNFHIHVQDVLDNIDKLEG
VERLVVAHVSERHGSHRNILRLLAAALPPTLTNKVSIALGEFGAPQHLSF
LEDYVPGELSPQRFSRQDSQGREA
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mRNA from alignment at L-elsbetiae_contig110:43259..48217-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig110.904.1 ID=mRNA_L-elsbetiae_contig110.904.1|Name=mRNA_L-elsbetiae_contig110.904.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4959bp|location=Sequence derived from alignment at L-elsbetiae_contig110:43259..48217- (Laminarionema elsbetiae ELsaHSoW15)
CGGTCCTGTTGCCCAAGAGACAGAGAAAAACGGAAGAAGAAGAGGAAGAG
AGAGGGGTTTCTCGTCTATACAGTATTTTGTTTCTACCGAAGAAGTGACT
CGTGCGAAGAGGATAAATATTTGTCTGCGTGTGCAGCAGCGGTAAGAACA
CACAGTAGTTGTTGGGTGTCGATGCTGCACAGCAGCAGCAGCAGCATCTT
GCGGCGAGCTGCTAGGAAGGTAGTTTGTCTGCTTCTCGCTCGGCCTAGTA
GCTCCTACCAAAACGCAGTGGGGCGGAGAGGCATGGCCGAGCTTACCAAC
ACAATCCTGCAGAGAAGCAATCCTCATGCCACTGGCGCGGAGACGTCACC
GATAACCACCAGCCAAACCAAAGGAGCTCCAAGTACCACTTCTTTACCAA
CAGCATCAACGCCGTCGCCGAAAGGGACGAGGGAAGACAAGACGCGCGGT
GGCCGGGGCAGAGTTCCGTTCGACGAGCGAGCTGTGACCGGAGGTGGCTT
CTTCGTGGCTGGGGCGTGGTCCAAGGCCGGGGTGTGCTCATGTTTCAATA
TCCGGCACCGGCACCTGCTCGGCAAGCACGGCGTGGTTTTCGACATGGGT
GTCTGCCCTTCCGAGGTAGGTGCTTTTGTCGAAGCCTCTGTGCACCTATC
CGATCGAGGTTAGTGGAAATAACGAAATAACACCCCGTCAGCCACCCCAT
ACGCTCTGCCCCCCCCTCCGGCCGTCTGCTGTTGTCACGCTGTACTCTGC
CAGGGGAGTGCGTGCATGTCAGAGATATGACTACTGTATCCCCGCCGCGC
CAGTTTGTTAGCAAAGCATGGCGCTGTTCTAACACGGACGCTCTCACGCA
GGCCGAACGTGCAAGCTCCCTTTGCATATCCACCTAATGCACGCACAGGT
TGAGAGGCACCAAAACCGCAGGCACGCTTTCAATGCACCGCACCGCGCCC
TATTGGAAATTAGGCTCGTGCCGACGGGCGTTGGGAGCATATGCGTGCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTCTGAGGCAGATCGGAAC
ATTTCGGAAGGCAGAAAGGCGTTGAAACAACTGCATGAAATTGTGCACCG
CATAGAAGTGTACCTCTCCCTAAGCTACATGCCTCACAGCCTCACCCCCC
ACCAAGGGCCACAATCACCGCGACCAGATAGATCGACTCTAAAGACCGCC
ACTCCCCCGGTCCCCGCCCTCTCCCCCATGTATGTGTTGTTTCCTACCCA
ACAACTGCACACAGGTCTTGCATGTGCAGCATGTTTTCGTATCACACGGG
CACCTGGACCATTGCGGGGCCATCGTGTCGCACGCTCGCCTACGGGCGCT
GTCACAGGGGGCCCCGGCGAAGTACTACATGGGTGCGGAGCTAGCTGCGG
GCATGGAGAAGGTACAGCAGCAGTGTTTCATCCGGAGGCAGGTTCACGTA
GTGGAGTGAAATTTCAAAAGCACTGTCTAGGGACGTTATTTCGAGGAGCT
TGTTTTGAGAGAGTACACCCTTTTTCGGGGTGTGTGATGTTCTGGGAATA
AAATGCCCAGAGTGCTCAAGTTGGTGAGGATTTATTGGTTGGTACCGCAG
GCGTGGACAGATCCGTGGGTATCCTCCCGCTCCCCTGCTGCTGCTGTCGC
ATTCGGACAGCAGCGTCCGTGCCACCCAGTGCCGAAATTCCGGGAAGTAT
CCACTTGGTCCGCCAGACCACACAGACGCTGATGATTTCGAACAATCGCC
ATGTTTCGCCATCACCCCGCCGGGCGTTTGATCAATTTTTTGGCAGGTCC
GCAAGGCCTTTGAAGATGTGGAAGGTGCTAGCATCGCCATGGACATCGTG
GCCGTGGAGCCCGAAGACTGCATCGATCTCGGGCAAGGCTGCTTCGTGCG
TCCCTTCCTTGTGCAGCACAGGCAGGCGCACTTAGCTTGTAGAAGAGTGC
TTTTGATCGGCAGATGTGTGGCATGGGCGTACGCAGTCCGCAGGGCCGGC
TGTGCGCACTCTACACCGATTTTGACTGACCACGCCCTGACATGTCTTGC
CGCCCCACCATTTCACGCCTAGTACTCGAGTGGCAGCACCCTCCCAGCAC
TTTTCCTACGCACTTTCAAGTGCCGAAATCGCGTGATCGGTTACTCTCCA
GGCTTCGCCTCTCGCTGGCCCATTCCGTCCTGGACTATAACCTCACCTTA
GATCCCCTGTCCCGCTAAAAATGGCCCCCGTCCATCGCCCACCATCCAAA
ACCCAGATTACGTGCTGTTGCCAAAAAAGAAGTAGGTCATGGAAACCGTT
CTTACTCGTAAATGCACGTTGGAGGTACTGTAATGTAGCCCTACAGGGAA
TACCGGTAGGAGCGGTGCGAGAAAGGATGTCGCGTCTATGGTTGAGATGC
TCCATCAACTCGATCGAGGGGCCCAAATCACCGAGGAAGGTGAGCAACAA
GCAAGTGGACTGAATTTTTCCTCCTCTCTGCCCCCTGCCCCCTCGCTCCT
TTCCCCCTGCCGATGTAATGCGTCACCGGTTTGGTCACCCGGCCGGCGGC
AGGGTCAATGCCCTAGGGTTTGCGCTCTTGAGGCGTAAGGCGGAGGGGCT
GAAGCCCGAGTACCGAGAGCTGAATGGGAAGGCGATCGGGGCTCTCAAGT
GAGGGGAGGGCTTCCTTACACCTTTCCCTGATTTGTATTGTCGTTGCACG
GTCATGGGGTCGTGTTTCGTATGGGCGGGGGGTCCCCGGCGTATTTTCTA
CGTGGCAGCCACGGCAGTGTGCCAAATCGAAACTGCGTACCCAGGCCTGA
GAGGGAAACCTGCAGGAGCAGTCGAGGCGAGGTACATAGGTCGAGGTGTC
AAGGATCGGCGTAAAGGGGTTGGGGTGTGGTGTGATCGTTCGCGATGGGG
GCTGGTTGTGTCTGTTGTTGTGGTTGATATTGTTGCTTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTCATGGTCGCTATTGCATCTTCAAGTGTCT
ACGTCGCGTACGTGCTGGTATTCGTTTCGTCACCCGATAGGTGCTACGAT
TTGCAGAAAATGAGTAGAGGTAGGTTATGTCACCCTTTCCCCACACCAAA
ATACCCGAAGGATTTCGCGCGAGGGAATAAAACATGCATCTTCACAGGTT
GTATTTTGTTCTCGTCTTCTCCCCCCCCTCGCCCCCCCATATTTTTAACC
GCGCCTGCGCGTCCGCATCCGACAGAAAGCAGGGTGTGGATGTCTCCCTG
TCCCAGGAGCGCGTGGAGGTGGTCTACACGGGGGACACCGTCATGGACGG
GCTGGTGTCGCAGCCGATGGTGTGGGAGGCGCGGCTGCTGATCATGGAAG
TCACGTACCTCGACGGCGACGGGAGAGCGGCCGCCAAGAACTTCCACATA
CACGTGCAGGCGAGAGGCGATGAAAACCACATAAAAACCACAAAGACCTC
GTCAACTCATGTGTACACCTTCGGCCACTATCTCTGTCAGTCGTGTCGTT
GAAGGTGCGCGGGTACACCTGTGCGGAAGAAATGGGCCAGAGAGCCAGCC
GTACCGCTGCTGTACATACCAGTAGTTTTTTTTTTCCTTTCACAAAACGA
ACAAGTCGCTGCTGCCTCTCCATGCGATTCACCTTTTGGCCAAACCTCTT
GGGTGCCGCGTTGAAACGTCTTGTGCGTGTGCAAGTGCGGCACGATGGGC
AAGCGCGCGAACGAGATGCCATTGATACGTCCCTAACCTTCTTCGTTTTG
CGGCTCACGGGCTCTACGGAGGTGTTGTGGCGAAGGACGTAATTTTTAGT
TTTTTTTTTTCAGTCGACGCTGAAAGCCCTGCTGGCCTGCTTTCTTCTAC
TCCCGCTCTTGTGCCCTTTTGGAGTACATAGGTGTGTGTACGCATGACTT
ATATCGCTCGTCGGTGACGTCTGACTTTGTCGTTTTCATTCTTATTCTGA
TGGATGGAGCGGCTGCTGTATCGCGCGGTGTGGTTCTGTTACCTTCCCGC
ACTCGCGTGCTCGGCTCTTCTTTTGATTCTTGAAAAGGCCGATCTTCGTA
ATGCCCTTGTTTCGCCTTATTTTCGCTGTTTTGCGTCTCTTTCGCCTGAT
CTGGTCGCAACCTGTGCACGCCGCGAACCGCAGGATGTCCTGGACAACAT
CGACAAACTCGAAGGCGTGGAGCGGCTGGTGGTGGCGCACGTGTCTGAGA
GACACGGCAGCCACCGCAATATACTACGCCTGCTCGCGGCGGCTCTCCCG
CCGACCTTAACTAACAAGGTACAGGGTCAGATGAGAGCTCGGGTCGACGC
CGAGGGGGGGCAGGGGGGGAAGGGGCGAAGGCGCACTCGATTTACCTCAT
TTGTTGGTGCTTTGTCGCCGAATAGGTTTTTGTGTCTCGTCGCAGTAGGG
GCAGAAGACCATATGGAGGTTTCGCCAACCTGGCAGGCGTTTGAGGCCAG
AGGGGGTGCGTACAGTACAGCCAGCAAGCTTTGGTTGTTGCCTACCGCAA
GTGTGCAGAAAAAATAGTCATGAGGCTCGTCATAGACGGGGCGCCGCTCC
AGCTCACGAGGAGGGCCGATTCCCAACGTTGAAGTATTGCTTTCACGGAC
GCCGTATGCTTTAGCCCATCCCTCATAAATAATCCTTCATAGGCGTGACA
AAGAGTTCGGCTGCTGAGCTCTTTTTGGCAGGCCACCACTACTGCTACAA
TACTTTGGTTGAGCAGAGTAGGTTACTCAAATCAAACCAAGAGAGCACGC
CGTGTCCTCGTTATTTGCCGACAAAAAAAACAAATTGTGTTCCAATGGCC
AAATGAATATTTTCCCCATGTTGGTGCACACCTCGTAGGTGTCTATTGCG
CTTGGAGAGTTCGGCGCACCGCAGCACCTTTCCTTCTTGGAGGACTACGT
TCCCGGAGAGCTTTCCCCGCAAAGATTTTCTCGGCAAGACTCCCAAGGCA
GAGAAGCGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig110:43259..48217-

>mRNA_L-elsbetiae_contig110.904.1 ID=mRNA_L-elsbetiae_contig110.904.1|Name=mRNA_L-elsbetiae_contig110.904.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2844bp|location=Sequence derived from alignment at L-elsbetiae_contig110:43259..48217- (Laminarionema elsbetiae ELsaHSoW15)
CGGTCCTGTTGCCCAAGAGACAGAGAAAAACGGAAGAAGAAGAGGAAGAG
AGAGGGGTTTCTCGTCTATACAGTATTTTGTTTCTACCGAAGAAGTGACT
CGTGCGAAGAGGATAAATATTTGTCTGCGTGTGCAGCAGCGGTAAGAACA
CACAGTAGTTGTTGGGTGTCGATGCTGCACAGCAGCAGCAGCAGCATCTT
GCGGCGAGCTGCTAGGAAGGTAGTTTGTCTGCTTCTCGCTCGGCCTAGTA
GCTCCTACCAAAACGCAGTGGGGCGGAGAGGCATGGCCGAGCTTACCAAC
ACAATCCTGCAGAGAAGCAATCCTCATGCCACTGGCGCGGAGACGTCACC
GATAACCACCAGCCAAACCAAAGGAGCTCCAAGTACCACTTCTTTACCAA
CAGCATCAACGCCGTCGCCGAAAGGGACGAGGGAAGACAAGACGCGCGGT
GGCCGGGGCAGAGTTCCGTTCGACGAGCGAGCTGTGACCGGAGGTGGCTT
CTTCGTGGCTGGGGCGTGGTCCAAGGCCGGGGTGTGCTCATGTTTCAATA
TCCGGCACCGGCACCTGCTCGGCAAGCACGGCGTGGTTTTCGACATGGGT
GTCTGCCCTTCCGAGCGGTCCTGTTGCCCAAGAGACAGAGAAAAACGGAA
GAAGAAGAGGAAGAGAGAGGGGTTTCTCGTCTATACAGTATTTTGTTTCT
ACCGAAGAAGTGACTCGTGCGAAGAGGATAAATATTTGTCTGCGTGTGCA
GCAGCGGTAAGAACACACAGTAGTTGTTGGGTGTCGATGCTGCACAGCAG
CAGCAGCAGCATCTTGCGGCGAGCTGCTAGGAAGGTAGTTTGTCTGCTTC
TCGCTCGGCCTAGTAGCTCCTACCAAAACGCAGTGGGGCGGAGAGGCATG
GCCGAGCTTACCAACACAATCCTGCAGAGAAGCAATCCTCATGCCACTGG
CGCGGAGACGTCACCGATAACCACCAGCCAAACCAAAGGAGCTCCAAGTA
CCACTTCTTTACCAACAGCATCAACGCCGTCGCCGAAAGGGACGAGGGAA
GACAAGACGCGCGGTGGCCGGGGCAGAGTTCCGTTCGACGAGCGAGCTGT
GACCGGAGGTGGCTTCTTCGTGGCTGGGGCGTGGTCCAAGGCCGGGGTGT
GCTCATGTTTCAATATCCGGCACCGGCACCTGCTCGGCAAGCACGGCGTG
GTTTTCGACATGGGTGTCTGCCCTTCCGAGGTCTTGCATGTGCAGCATGT
TTTCGTATCACACGGGCACCTGGACCATTGCGGGGCCATCGTGTCGCACG
CTCGCCTACGGGCGCTGTCACAGGGGGCCCCGGCGAAGTACTACATGGGT
GCGGAGCTAGCTGCGGGCATGGAGAAGGTCTTGCATGTGCAGCATGTTTT
CGTATCACACGGGCACCTGGACCATTGCGGGGCCATCGTGTCGCACGCTC
GCCTACGGGCGCTGTCACAGGGGGCCCCGGCGAAGTACTACATGGGTGCG
GAGCTAGCTGCGGGCATGGAGAAGGTCCGCAAGGCCTTTGAAGATGTGGA
AGGTGCTAGCATCGCCATGGACATCGTGGCCGTGGAGCCCGAAGACTGCA
TCGATCTCGGGCAAGGCTGCTTCGTGCGTCCCTTCCTTGTGCAGCACAGG
TCCGCAAGGCCTTTGAAGATGTGGAAGGTGCTAGCATCGCCATGGACATC
GTGGCCGTGGAGCCCGAAGACTGCATCGATCTCGGGCAAGGCTGCTTCGT
GCGTCCCTTCCTTGTGCAGCACAGGGTCAATGCCCTAGGGTTTGCGCTCT
TGAGGCGTAAGGCGGAGGGGCTGAAGCCCGAGTACCGAGAGCTGAATGGG
AAGGCGATCGGGGCTCTCAAGGTCAATGCCCTAGGGTTTGCGCTCTTGAG
GCGTAAGGCGGAGGGGCTGAAGCCCGAGTACCGAGAGCTGAATGGGAAGG
CGATCGGGGCTCTCAAAAAGCAGGGTGTGGATGTCTCCCTGTCCCAGGAG
CGCGTGGAGGTGGTCTACACGGGGGACACCGTCATGGACGGGCTGGTGTC
GCAGCCGATGGTGTGGGAGGCGCGGCTGCTGATCATGGAAGTCACGTACC
TCGACGGCGACGGGAGAGCGGCCGCCAAGAACTTCCACATACACGTGCAG
AAAGCAGGGTGTGGATGTCTCCCTGTCCCAGGAGCGCGTGGAGGTGGTCT
ACACGGGGGACACCGTCATGGACGGGCTGGTGTCGCAGCCGATGGTGTGG
GAGGCGCGGCTGCTGATCATGGAAGTCACGTACCTCGACGGCGACGGGAG
AGCGGCCGCCAAGAACTTCCACATACACGTGCAGGATGTCCTGGACAACA
TCGACAAACTCGAAGGCGTGGAGCGGCTGGTGGTGGCGCACGTGTCTGAG
AGACACGGCAGCCACCGCAATATACTACGCCTGCTCGCGGCGGCTCTCCC
GCCGACCTTAACTAACAAGGATGTCCTGGACAACATCGACAAACTCGAAG
GCGTGGAGCGGCTGGTGGTGGCGCACGTGTCTGAGAGACACGGCAGCCAC
CGCAATATACTACGCCTGCTCGCGGCGGCTCTCCCGCCGACCTTAACTAA
CAAGGTGTCTATTGCGCTTGGAGAGTTCGGCGCACCGCAGCACCTTTCCT
TCTTGGAGGACTACGTTCCCGGAGAGCTTTCCCCGCAAAGATTTTCTCGG
CAAGACTCCCAAGGCAGAGAAGCGGTGTCTATTGCGCTTGGAGAGTTCGG
CGCACCGCAGCACCTTTCCTTCTTGGAGGACTACGTTCCCGGAGAGCTTT
CCCCGCAAAGATTTTCTCGGCAAGACTCCCAAGGCAGAGAAGCG
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