mRNA_L-elsbetiae_contig11.899.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11.899.1 vs. uniprot
Match: A0A6H5JCA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA6_9PHAE) HSP 1 Score: 619 bits (1597), Expect = 4.760e-208 Identity = 392/727 (53.92%), Postives = 467/727 (64.24%), Query Frame = 2
Query: 110 LKEAAAGVLFVTLAVTILE-MDVFYRDQGSSTNNFRR---LPHSGDIMINPAARLPNEGRLR-KNGERVAGLSDDVGTRSIHNGSLQRERQRWLKARARCIRNG----GGSDCMDKGDGDGSTTEAVGASAEGTTTEAAVAVS-----------------------GTAAHPQSRATAA---VVDRNSKNAGSGDXXXXXXXXXXGSRIXXXXXGSRLLTAGGNAREFPPRSRNSDANSNPYSSPSLRKGRGDGFVTPPPPAGTQDERKHHPLPL-PGIERNHHDVEVKVEVPAGKAEVA-RMLGESAGLPGQEAVNEAERKTVEVDEAGXXXXXXDVMELPLEERLSRLEAGITLWGGTYVPPIAPDEKQRLIQRWTASAEGSGGNGP------------ATATAT---VGAPRVLFVVTSFDRGHRLGASANKVDKLDYILMIMDEIREACEAGFSPHVHLISAWDARAELGLFYDRLFCRRIGGPVTLTLEEHPPSVREALAIKHRVYMKPRVKEFDLFIQMEDDMILTVNHLLLYLQESEKLSLRNEGSRP----TYDLMPGFVRVEPEPGVTGVGGEWFEWEIILSRFRGVHVVGAGTYLKLEKSRVLPYSGNNQGFWMATQEQLKYLQRQCQYLRYTEKSNVPFVEKFSGSLQMFSPECHSTKLFPATRFEDFMVHHRTNNKNGKRGESTPAVSVSMIRLWAAQVVRDDSMLMEIGKTGRR 2122
LK AA ++ T+ V +LE +++ + G + R L H D MINP LPNE R++ ++G VA LSDD+GTRS+HNG QRERQ WL+ RA+ IR G G S +D+ G + +++ GA + + AA A + GTA + A+AA + + + G GD XXXXXXXXX XXXXX + G R SL++GRG G V R++ P PG+ R E K + GK E R LG+ PGQ + E E LPLEERLSRLE G+ LWG TYVPPIAP E +RL ++WTA SG A+ TA V P +LFVVTSFDRG RLG VDKLDY+LMIMDEIR ACEAGFSPHVHLISAW+A+ EL LF DRL CR+IGGPVTLTLE+HPPS++E L+IKHR+YMKPRV+E+DLF+Q+EDDMILTVNH+L YL+ESEKLSLRN GSRP +D MPGF+RVEP+PG TGVGGEWFEWEIILSRFRGVHVVGAGTYL LEKSRVLP SGNNQGFWMATQEQLKYL RQCQYLRY E+S+ PFVEKFSGSL+MFSP CH+TK+FPA RFE+ +VHHRTNNKNG+RGES PAV VSM+RLWAAQVVRD MLME+G+TGRR
Sbjct: 8 LKAAAGVMVLATVTVMVLEILELSHGGWGGGKSGGGRDGALQHREDFMINPVTLLPNEWRVKTEDGVHVAELSDDIGTRSVHNGVHQRERQLWLETRAKDIREGRTGTGSSKSVDEESGSNAISDS-GAQGRESGSSAATARAXXXXXXXXXXXXXXXXXXXXTQMGTAEEARLSASAAADGIREGDETATGGGDPXXXXXXXXXXXXXXXXXXXXXXXXSSGPNR-------------------SLQRGRG-GDV----------HRENDVTPGGPGVGRGGGGEE-KQPLEGGKGEGGFRALGDEPP-PGQGDMEGGEVAAFE--------------PLPLEERLSRLETGVELWGATYVPPIAPKEMRRLTEKWTAVGAVSGAXXXXXXXXXXXXXXXASTTAAPDQVEMPSILFVVTSFDRGRRLGLRRKGVDKLDYVLMIMDEIRGACEAGFSPHVHLISAWEAQPELELFTDRLLCRKIGGPVTLTLEKHPPSIKETLSIKHRIYMKPRVREYDLFVQLEDDMILTVNHILTYLEESEKLSLRNIGSRPGAMPMHDYMPGFIRVEPKPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLGLEKSRVLPISGNNQGFWMATQEQLKYLCRQCQYLRYAEQSSDPFVEKFSGSLEMFSPPCHTTKVFPAERFENLLVHHRTNNKNGQRGESVPAVPVSMLRLWAAQVVRDGEMLMEVGQTGRR 687
BLAST of mRNA_L-elsbetiae_contig11.899.1 vs. uniprot
Match: D7G8K3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K3_ECTSI) HSP 1 Score: 599 bits (1545), Expect = 1.140e-204 Identity = 293/385 (76.10%), Postives = 326/385 (84.68%), Query Frame = 2
Query: 1019 LPLEERLSRLEAGITLWGGTYVPPIAPDEKQRLIQRWTASAEGSGGNGPA-------------TATATVGAPRVLFVVTSFDRGHRLGASANKVDKLDYILMIMDEIREACEAGFSPHVHLISAWDARAELGLFYDRLFCRRIGGPVTLTLEEHPPSVREALAIKHRVYMKPRVKEFDLFIQMEDDMILTVNHLLLYLQESEKLSLRNEGSRPT----YDLMPGFVRVEPEPGVTGVGGEWFEWEIILSRFRGVHVVGAGTYLKLEKSRVLPYSGNNQGFWMATQEQLKYLQRQCQYLRYTEKSNVPFVEKFSGSLQMFSPECHSTKLFPATRFEDFMVHHRTNNKNGKRGESTPAVSVSMIRLWAAQVVRDDSMLMEIGKTGRR 2122
LPLEERL RLE G+ LWG TYVPPIAP+E +RL +WTA SG TA TV AP +LFVVTSFDRG RLG VDKL+Y+LMIMDEIR ACEAGFSPHVHLISAW+A+ E+ LF DRL CRRIGGPVTLTLEEHPPS++EAL+IKHR+YMKPRV+E+DLF+Q+EDDMILTVNH+L YL+ESEKLSLRN G+RP +D MPGFVRVEPEPG TGVGGEWFEWEIILSRFRGVHVVGAGTYL LEKSRVLP+SGNNQGFWMATQEQLKYL RQCQYLRYT +S+VPFVEKFSGSL+MFSP CH+TK+FPA RFE+F+VHHRTNNKNGKRGESTPAVSVSM+RLWAAQVVRDD MLME+G+TGRR
Sbjct: 12 LPLEERLGRLETGVELWGATYVPPIAPEEMRRLTDKWTAVGAVSGAXXXXXXXXXXXXXXXXXTAATTVEAPSILFVVTSFDRGRRLGRRGKGVDKLNYVLMIMDEIRGACEAGFSPHVHLISAWEAQPEVELFTDRLLCRRIGGPVTLTLEEHPPSIKEALSIKHRIYMKPRVREYDLFVQLEDDMILTVNHILKYLEESEKLSLRNIGTRPRAMPMHDYMPGFVRVEPEPGATGVGGEWFEWEIILSRFRGVHVVGAGTYLGLEKSRVLPFSGNNQGFWMATQEQLKYLCRQCQYLRYTGQSSVPFVEKFSGSLEMFSPPCHTTKVFPAERFENFLVHHRTNNKNGKRGESTPAVSVSMLRLWAAQVVRDDEMLMEVGQTGRR 396
BLAST of mRNA_L-elsbetiae_contig11.899.1 vs. uniprot
Match: A0A6H5KYA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA1_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 5.290e-121 Identity = 272/660 (41.21%), Postives = 345/660 (52.27%), Query Frame = 2
Query: 218 LPHSGD--IMINPAARLPNEGRLRKNGERVAGLSDDVGTRSIHNGSLQRERQRWLKARARCIRNGGGSDCMDKGDG---DGSTTEAVGASAEGTTTEAA--VAVSGTAAHPQSRATAAVVDRNSKNAG-----SGDXXXXXXXXXXGSRIXXXXXGSRLLTAGGNAREFPPRSRNSDANSNPYSSPSLRKGR----------GDGFVTPPPPAGTQDERKHHPLPLPGIERNHHDVEVKVEVPAGKAEVARMLGESAGLPGQEAVNEAERKTVEVDEAGXXXXXXDVMELPLEERLSRLEAGITLWGGTYVPPIAPDEKQRLIQRWTASAEGSGGNGPATATATVGAP--RVLFVVTSFDRGHRLGASAN-KVDKLDYILMIMDEIREACEAGFSPHVHLISAWDARAELGLFYDRLFCRRIGGPVTLTLEEHPPSVREALAIKHRVYMKPRVKEFDLFIQMEDDMILTVNHLLLYLQESEKLSLR--NEGSRPTYDL-MPGFVRVEP----EPGVTGVGGEWFEWEIILSRFRGVHVVGAGTYLKLEKSRVLPYSGNNQGFWMATQEQLKYL--QRQCQYLRYTEKSNVPFVEKFSGSLQMFSPECHSTKLFPATRFEDFMVHHRTNNKNGKRGESTPAVSVSMIRLWAAQVVRDDSML 2095
LP S + + + P LPN+GR + AG+ DD G RS H G +QR Q WL RA + + G +D G +G T +A A +G T A V+G A + + AV S AG +G S TA G E R P LR+G G+G T P A T LP G ++ V V T + E L ER+ RL+ G LW GTYVPPI P ++ LI +W S G GP A G R+L+V++S+DRG RLG N KVDKLDYILM+MDE+REACEAGFSPHVHLI+AWD L DRLFC+R G V + EEHPPSVR LAIKHR+YMK RV++FD+F+Q+EDDMI+T+NH+LLY +E + L +R GSR ++ +PGF+RVEP + GEWFEWEI+ F +++ GAGTY+ L S+VLP +GNNQG WMAT+EQLK + + C YL + E S E SGS+QMF PEC K+FPAT FEDFMVHHRTNNKNG+ GES P VS +M+R+WA Q +RD+ ML
Sbjct: 150 LPESWEREVGLTPGVMLPNQGRSKVG---RAGVGDDSGWRSPHYGDIQRGHQAWLLQRAEEMGSREGVASVDTHSGGRIEGGTADANAAQGKGKTDGVAEEAEVAGEAGESEGGSPVAVGSEGSTRAGEAAAAAGGRGLEGRGDAELFFSRAVVAASATATAAGGGTETGTRR------------PRLRRGLKRQEATPETGGEGAKTAPTEATT--------LPSEGKKKR-----VAVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTADTGEE-----RAQQSSLAATERVWRLKRGAELWPGTYVPPIEPTRRRELIYKW------SYGKGPEEAAGATGGESGRILYVISSYDRGKRLGLGYNGKVDKLDYILMMMDEMREACEAGFSPHVHLIAAWDTSEVADLIRDRLFCQRTGDLVPYSHEEHPPSVRNNLAIKHRIYMKSRVEDFDVFMQVEDDMIVTLNHILLYREECDNLDIRFGMGGSRGRPNVFVPGFLRVEPGGTKDKEKDKGEGEWFEWEIV---FNPINIYGAGTYMSLTPSKVLPRAGNNQGMWMATREQLKKMAANKACNYLEFDESSTNGIPEMHSGSIQMFLPECGFIKVFPATHFEDFMVHHRTNNKNGRAGESIPGVSTAMLRVWAGQFLRDEGML 767
BLAST of mRNA_L-elsbetiae_contig11.899.1 vs. uniprot
Match: D7G997_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G997_ECTSI) HSP 1 Score: 366 bits (940), Expect = 2.890e-110 Identity = 195/391 (49.87%), Postives = 252/391 (64.45%), Query Frame = 2
Query: 983 AGXXXXXXDVMELPLEERLSRLEAGITLWGGTYVPPIAPDEKQRLIQRW----------TASAEGSGGNGPATATATVGAPRVLFVVTSFDRGHRLGASANKVDKLDYILMIMDEIREACEAGFSPHVHLISAWDARAELGLFYDRLFCRRIGGPVTLTLEEHPPSVREALAIKHRVYMKPRVKEFDLFIQMEDDMILTVNHLLLYLQESEKLSLR--NEGSRPTYDLMPGFVRVEPEPGVTGV------GGEWFEWEIILSRFRGVHVVGAGTYLKLEKSRVLPYSGNNQGFWMATQEQLKYL--QRQCQYLRYTEKSNVPFVEKFSGSLQMFSPECHSTKLFPATRFEDFMVHHRTNNKNGKRGESTPAVSVSMIRLWAAQVVRDDSML 2095
AG DV +EER+ R+E G+ LWG T+VPP+ P + LI +W T+S++ GG+ T A R+LFV+TSFDRG RLG S K DKLD+IL++MDEIREACEAGFSP VHLI+AW+ DRLFCRR G V +LE HP S+ L+IKHR++MKPR++EFDLFIQ+EDD+I+T+NH+LL+ +ESE L R ++G+ +PGF+RVE G G EW EWE++LSR R V + AG +L L S +P GNNQG WMAT+EQL+ L ++ C YL + E S VE SGSLQMF P C K+FPA+RFE F+VHHR NNK+G RGES P V +S++R W Q +RD+ L
Sbjct: 315 AGAGPLPTDVGAASVEERVHRMEEGVRLWGATFVPPVEPTRRLELIDKWSGNAGRGRTNTSSSQEGGGDADEN-TRGDDAGRILFVMTSFDRGRRLGPSFKK-DKLDFILLMMDEIREACEAGFSPTVHLIAAWELSGVEVFVRDRLFCRRTGAHVPYSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFIQVEDDVIVTLNHMLLFREESELLDGRRHSDGAPLANTAVPGFIRVEHAAEEEGTIAGPSSGEEWQEWEVMLSRLRPVKLEEAGIFLTLGPSLPVPRGGNNQGMWMATREQLRKLSEKKSCDYLNFDESSTKGHVETHSGSLQMFRPNCGLQKVFPASRFESFLVHHRANNKHGVRGESVPGVPISLLRSWVEQFIRDEKFL 703
BLAST of mRNA_L-elsbetiae_contig11.899.1 vs. uniprot
Match: D8LJ04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ04_ECTSI) HSP 1 Score: 317 bits (813), Expect = 2.510e-92 Identity = 171/325 (52.62%), Postives = 216/325 (66.46%), Query Frame = 2
Query: 1031 ERLSRLEAGITLWGGTYVPPIAPDEKQRLIQRWTASAEGSGGNGPATATATVGAP--RVLFVVTSFDRGHRLGASAN-KVDKLDYILMIMDEIREACEAGFSPHVHLISAWDARAELGLFYDRLFCRRIGGPVTLTLEEHPPSVREALAIKHRVYMKPRVKEFDLFIQMEDDMILTVNHLLLYLQESEKLSLR--NEGSRPTYDL-MPGFVRVEP----EPGVTGVGGEWFEWEIILSRFRGVHVVGAGTYLKLEKSRVLPYSGNNQGFWMATQEQLKYL--QRQCQYLRYTEKSNVPFVEKFSGSLQMFSPECHSTK-LFPATR 1966
ER RL+ G LW GTYVPPI P ++ L+ +W S G GP A G R+L+V++S+DR RLG + KVDKLDYILM+MDE++EACE GFSPHVHLI+AWD L DRLFC+R G V + EEHPPSVR LAIKHR+YMKPRV++FD+F+Q+EDDMI+T+NH+LLY +E + L R GSR ++ +PGF+RVEP + GEWFEWEI+LSR + + GAGTY+ L S+VLP +GNNQG WMAT+EQLK + + C YL + E S E SGS+QMF PEC K L+P R
Sbjct: 324 ERAWRLKRGAELWRGTYVPPIEPTRRRELVYKW------SYGKGPEEAAGATGGESGRILYVISSYDRRKRLGLGYDGKVDKLDYILMMMDEMKEACEGGFSPHVHLIAAWDTSEVADLIRDRLFCQRTGELVPYSSEEHPPSVRNNLAIKHRIYMKPRVEDFDVFMQVEDDMIVTLNHILLYREECDNLEKRLGMGGSRGRPNVFVPGFLRVEPGGTKDKEKDKWEGEWFEWEIVLSRLNPIKIYGAGTYMSLSPSKVLPRAGNNQGMWMATREQLKKMAANQACNYLEFDESSANGIPEMHSGSIQMFLPECGFIKVLYPNPR 642
BLAST of mRNA_L-elsbetiae_contig11.899.1 vs. uniprot
Match: A0A6H5K627_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K627_9PHAE) HSP 1 Score: 304 bits (779), Expect = 8.930e-87 Identity = 185/442 (41.86%), Postives = 251/442 (56.79%), Query Frame = 2
Query: 983 AGXXXXXXDVMELPLEERLSRLEAGITLWGGTYVPPIAPDEKQRLIQRWTASAEGSGGNGPATATATVG----------------APRVLFVVTSFDRGHRLGASANKVDKLDYILMIMDEIREACEAGFSPHVHLISAWDARAELGLFY-DRLFCRRIGGPVTLTLEEHPPSVREALAIKHRVYMKPRVKEFDLFIQMEDDMILTVNHLLLYLQESEKLSLR--NEGSRPTYDLMPGFVRVEPEPGVTGV------GGEWFEWEIILSRFR---------GVHVVGA-----------------------------GTY-----LKLEKSRV-LPYSGNNQGFWMATQEQLKYLQR--QCQYLRYTEKSNVPFVEKFSGSLQMFSPECHSTKLFPATRFEDFMVHHRTNNKNGKRGESTPAVSVSMIRLWAAQVVRDDSML 2095
AG D +EER+ R+E G+ LWGGT+VPP+ P + LI +W+ A G G + + + A R+LFV+TSFDRG RLG S K DKLD+IL++MDE+REACEAGFSP+VHLI+AW+ +E+ +F DRLFCRR GG V +LE HP S+ L+IKHR++MKPR++EFDLF+Q+EDD+I+T+NH+LL+ +ESE L R ++G+ +PGF+RVE G G G EW EWE++LSR R G+ + A G + +KLE++ + L + G WMAT+EQL+ L C YL + E S VE SGSLQMF P C RF+ F+VHHR NNK+G RGES P V ++++R W Q +RD+ L
Sbjct: 314 AGAGPLPTDGAAASVEERVHRMEEGVRLWGGTFVPPVEPTRRLELIDKWSGHA-GRGRSKTSNSQEVSSFDYRSSDGGENSRGDDAGRILFVMTSFDRGRRLGPSFKK-DKLDFILLMMDEMREACEAGFSPNVHLIAAWEL-SEVEVFVRDRLFCRRTGGHVPYSLEVHPSSIGNDLSIKHRIFMKPRLEEFDLFLQVEDDVIVTLNHMLLFREESELLDSRRHSDGATLANTAVPGFIRVEHAAGEEGTVVGPSSGEEWQEWEVMLSRRRSSLGEGIEEGIGSMNATRRMHHRRSLCFFSSTLNELFFLDSLGMNGVFTRLHPVKLEEAGIYLTLGPSLPGMWMATREQLRKLSETMSCDYLNFDESSKG-HVETHSGSLQMFKPNCG--------RFQSFLVHHRANNKHGVRGESVPGVPITLLRCWVEQFIRDEKFL 743 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11.899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11.899.1 >prot_L-elsbetiae_contig11.899.1 ID=prot_L-elsbetiae_contig11.899.1|Name=mRNA_L-elsbetiae_contig11.899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=679bp MAGLRGYLKEAAAGVLFVTLAVTILEMDVFYRDQGSSTNNFRRLPHSGDIback to top mRNA from alignment at L-elsbetiae_contig11:52719..66695- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11.899.1 ID=mRNA_L-elsbetiae_contig11.899.1|Name=mRNA_L-elsbetiae_contig11.899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=13977bp|location=Sequence derived from alignment at L-elsbetiae_contig11:52719..66695- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11:52719..66695- >mRNA_L-elsbetiae_contig11.899.1 ID=mRNA_L-elsbetiae_contig11.899.1|Name=mRNA_L-elsbetiae_contig11.899.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4074bp|location=Sequence derived from alignment at L-elsbetiae_contig11:52719..66695- (Laminarionema elsbetiae ELsaHSoW15)back to top |