mRNA_L-elsbetiae_contig10913.829.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10913.829.1
Unique NamemRNA_L-elsbetiae_contig10913.829.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: A0A6H5K6Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Q8_9PHAE)

HSP 1 Score: 449 bits (1154), Expect = 4.580e-149
Identity = 227/244 (93.03%), Postives = 232/244 (95.08%), Query Frame = 2 
Query: 1094 QAFEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAESSGRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSLWQGERLLGEGVATG 1825
            +AFEAVGK+VAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVE+CLATR VNGGLMALPELLQRLR KGNRK RQ ISADDVRRATSKLQVLGSGFA+LEIGKTTMVVSVPRELSSDHSAVLLLAE+SGRITEADISE LQW G RPRRVLDELMQEGMAWVDGDGAGPAMGGGGG PAYFFPSLW GERLL EGV  G
Sbjct:   19 EAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFALLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEELQWEGGRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGRPAYFFPSLWHGERLLDEGVGDG 262
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: D8LQG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG3_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 3.800e-140
Identity = 222/263 (84.41%), Postives = 228/263 (86.69%), Query Frame = 2 
Query: 1094 QAFEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGV-------------------DPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAESSGRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSLWQGERLLGEGVATG 1825
            QAFEAVGK+VAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIG                    D    N+GFWAEVLGVGDFYYELAVQIVE+CLATR VNGGLMALPELLQRLR KGNRK RQ IS DDVRRATSKLQVLGSGF+VLEIGKTTMVVSVPRELSSDHSAVLLLAE+SGRITEADISE+LQW G RPRRVLDELMQEGMAWVDGDGAGPAMGGGGG PAYFFPSLWQGERLL EGV  G
Sbjct:    6 QAFEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGCERGRGKERDIARGVEGAKRDRDMHNRGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISTDDVRRATSKLQVLGSGFSVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLQWEGGRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGRPAYFFPSLWQGERLLDEGVGDG 268
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: A0A835YIN3_9STRA (EAP30/Vps36 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN3_9STRA)

HSP 1 Score: 286 bits (733), Expect = 1.660e-86
Identity = 153/265 (57.74%), Postives = 180/265 (67.92%), Query Frame = 2 
Query: 1097 AFEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIG----------------------VDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAESSGRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSLWQGERLLGEGVATG 1825
            AFE VG+  A EN++H+   + TFKG LE+FARKYKK INQDPAFRQQFQ MCASIG                      +DPLASNKGFWAEVLGVGDFYYELAVQI E+C+ATR  NGGLMAL ELLQRLR + ++K+   IS DD++RA +KL+VLG GFA++E+GKT MV+SVPRELS+D SAVL  AE SG  +   +   L W   R RR L  L Q+GMAWVD    G       G P +FFPSLW+GE LLG G   G
Sbjct:   20 AFEVVGQAAAAENMAHVQATLETFKGHLEDFARKYKKSINQDPAFRQQFQTMCASIGGMGKGRHGALREQCRPHNCASHLDPLASNKGFWAEVLGVGDFYYELAVQITEVCIATRETNGGLMALQELLQRLRARRSKKS-PAISLDDIKRAIAKLKVLGRGFALVEVGKTQMVLSVPRELSNDASAVLQAAEGSGHASVRALCVGLSWTQDRARRALTALAQDGMAWVDEQAPG-------GEPLFFFPSLWKGEHLLGGGAEGG 276
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: W7TGH7_9STRA (EAP30 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGH7_9STRA)

HSP 1 Score: 261 bits (667), Expect = 4.120e-77
Identity = 132/248 (53.23%), Postives = 182/248 (73.39%), Query Frame = 2 
Query: 1094 QAFEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAESS-GRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSLW-------QGERLLGEG 1813
            +AF ++GK++ EEN++H++G+MATFK SLE+FARK+KKDIN +P  R +F  MCA IGVDPLASNKGFWA++LGVGDFYYELAVQI+EICL TR +NGGL+ L +L QR++    R+    IS +D++ A +K+ +LG+GF++L+ GKTT+VVSVP ELSSDH+A+L +A++S   +T  ++ ++LQW   R R  LD +MQ GMAW+D  GA       G    Y+FPSLW       Q +R+ G+G
Sbjct:   18 EAFTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQ---KRRKVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQAGMAWLDAQGAD------GSREVYWFPSLWEEGLCQTQRDRVTGQG 256
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: A0A067BX53_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BX53_SAPPC)

HSP 1 Score: 238 bits (606), Expect = 1.260e-68
Identity = 122/253 (48.22%), Postives = 166/253 (65.61%), Query Frame = 2 
Query: 1043 RDGNKSFAETTWNAACAQAFEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLA-ESSGRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSLWQGER 1798
            R G        W     +A+E VG ++ + +L+H+   +  FK +LE FA KYK  I +DPAFR +FQVMC+ IGVDPLAS KGFW+E+L +GDFYYEL VQI+E+C+ TRP NGGL+ + ELL+ L  K   +  Q IS DD++R+  KL+VLG GF V+E+G  TM+V+VP ELS DHSA+LLLA E+ G +T A ++E+L W  +R    L+ L++E M WVD    G         PAY+FPS+  G +
Sbjct:    2 RRGKMGIGAVKWKQEQKKAYEEVGTQLTQSHLAHVQAQLDVFKTNLEAFAVKYKAQIKKDPAFRMRFQVMCSKIGVDPLASQKGFWSELLDMGDFYYELGVQIIEVCILTRPKNGGLIPIHELLRLLDKKRGLRM-QRISEDDIKRSVKKLKVLGEGFQVIELGAKTMIVTVPVELSQDHSAILLLAQETQGMVTTALLAEKLLWDVNRSTIALNVLLRESMVWVDDQNPGA--------PAYYFPSIAMGSQ 245
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: A0A7S2W3J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3J7_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.390e-65
Identity = 114/240 (47.50%), Postives = 167/240 (69.58%), Query Frame = 2 
Query: 1094 QAFEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAES-SGRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSLWQGERLLGE 1810
            + ++ +G ++ ++ + H + ++  F+  LE+FA KYK  I  DP FR++FQ MC  IGVDPLASNKG W E+LGVGDFYYEL VQI+EIC+ TR  NGGL+++ +LL++LR   NR +RQ +S+DDV+R+ SKL+ LGSGF++L++G+TTMV+SVP EL+ DHSAVL +A+  +G++T   + + L WA  R  R L+ ++ EGMAW+D            G  +Y+F S+W    + GE
Sbjct:   25 EKYKQLGAELQDDRVKHATEVLGQFRTQLEDFAEKYKSSIRSDPVFRKEFQDMCMEIGVDPLASNKGLWGELLGVGDFYYELGVQIIEICIRTRSSNGGLISMRDLLRKLRKDSNR-SRQEVSSDDVKRSVSKLKKLGSGFSLLQVGRTTMVLSVPVELNRDHSAVLEVAQRHAGQVTLDGVQKELGWAEDRATRALERMVTEGMAWIDRHK---------GTTSYWFLSVWLESSIAGE 254
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: W4GXJ6_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXJ6_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.520e-65
Identity = 119/248 (47.98%), Postives = 166/248 (66.94%), Query Frame = 2 
Query: 1043 RDGNKSFAETTWNAACAQAFEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAESS-GRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSL 1783
            R G        W     +A+E VG ++ + +L+H+   +  FK +L+ FA KYK  I +DP FR++FQVMCA IGVDPLAS KGFW+E+L +GDFYYELAVQI+E+C+ TR  NGGL+A+ +LL  L  +      Q IS DD++R+  KL+VLG GF V+E+G  TM+V+VP ELS DHS++LLLA+ + G +T A +++RL W  +R    L+ L++EGM W+DG   G   G G    AY+FPS+
Sbjct:    2 RRGKMGIGAVKWKQDQKKAYEEVGAQLTQNHLTHVQEQLQVFKTNLQTFAVKYKSQIKKDPEFRKRFQVMCAKIGVDPLASQKGFWSELLDMGDFYYELAVQIIEVCILTRNKNGGLIAIQDLLALLDQRRG-PMMQKISDDDIKRSVKKLKVLGEGFNVIELGMKTMIVTVPVELSQDHSSILLLAQDTQGVVTVATLADRLGWDANRSTLALNVLLREGMVWLDG---GDQNGSG---AAYYFPSI 242
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: A0A1X7VQK8_AMPQE (Vacuolar-sorting protein SNF8 n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VQK8_AMPQE)

HSP 1 Score: 229 bits (583), Expect = 2.050e-65
Identity = 119/230 (51.74%), Postives = 157/230 (68.26%), Query Frame = 2 
Query: 1100 FEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAESSGRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSLWQ 1789
            F A G ++A+  LSHI+G + TFK  LEEFA K+K +I ++P FR  FQ MCA IGVDPLAS+KGFWA+ LGVGDFYYEL VQI+EICLATR  NGGLM   EL + + TK   K RQ +S +D+ RA  KL+VLG GF V+ +G   +V SVP EL+ DH+AVL  AES+  I+++ +   L+W+  R + VLD L++EGMAW+D   +        G   Y+FP L++
Sbjct:   21 FAAKGTEIADLQLSHIAGQLETFKKHLEEFASKHKNEIRKNPEFRNHFQQMCARIGVDPLASSKGFWAQTLGVGDFYYELGVQIIEICLATRERNGGLMTFEELKKHV-TKSGSKTRQDVSEEDLARAIKKLRVLGGGFTVIPVGGRRLVQSVPGELNMDHTAVLQKAESTAFISKSVLINELKWSEVRAQSVLDHLVREGMAWIDDQASD-------GERLYWFPGLFE 242
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: A0A024U5E7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U5E7_9STRA)

HSP 1 Score: 228 bits (582), Expect = 3.030e-65
Identity = 117/248 (47.18%), Postives = 164/248 (66.13%), Query Frame = 2 
Query: 1043 RDGNKSFAETTWNAACAQAFEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLA-ESSGRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSL 1783
            R G        W     +A+E  G ++ + +L+H+   +  FK +L+ FA KYK  I +DP FR++FQVMCA IGVDPLAS KGFW+E+L +GDFYYELAVQI+E+C+ TR  NGGL+A+ +LL  L  +      Q IS DD++R+  KL+VLG GF V+E+G  TM+V+VP EL+ DHS++LLLA E+ G IT A ++E+L W  +R    L+ L++EGM W+DG+   P         AY+FPS+
Sbjct:    2 RRGKMGIGAVKWKQEQKKAYEEAGAQLTQSHLAHVQEQLEVFKTNLQTFAVKYKSQIKKDPEFRKRFQVMCAKIGVDPLASKKGFWSELLDMGDFYYELAVQIIEVCILTRNKNGGLIAIQDLLGLLDQRRG-PLMQKISDDDIKRSVKKLKVLGEGFNVIELGSKTMIVTVPVELNQDHSSILLLAQETKGVITVATLAEKLGWDANRSMLALNILLREGMVWLDGEQNCPGT-------AYYFPSI 241
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BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Match: A0A7N0UU33_KALFE (Vacuolar protein sorting-associated protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UU33_KALFE)

HSP 1 Score: 228 bits (581), Expect = 4.330e-65
Identity = 119/242 (49.17%), Postives = 160/242 (66.12%), Query Frame = 2 
Query: 1082 AACAQAFEAVGKKVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQTISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLAESSGRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGGGHPAYFFPSLWQGERLLG 1807
            AA    +  +G+ VA+     +   +ATF+  LE+FARK+K DI ++PAFR QF  MCA +GVDPLASNKGFWAE+LG+GDFYYEL VQIV+ICLATRP NGGL++L EL  RL  +  + AR+ +S DD  RA SKL+VLGSGF V+ +GK  +V SVP EL+ DH+ +L LA++ G +T  ++ +RL W   R    LD L+ EG+A +D        G   G P Y+FP +     ++G
Sbjct:   14 AAARDQYRLLGENVAKIRTDMMKEQLATFRNQLEDFARKHKNDIRKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPHNGGLISLQELC-RLLCQRRKSAREAVSEDDCLRAISKLKVLGSGFEVISVGKRKLVRSVPTELNKDHNEILELAQAQGFVTVEEVEKRLSWPSGRVVDALDTLLDEGLAMID-------KGHRDGIPRYWFPCVSSIASIVG 247
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10913.829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6Q8_9PHAE4.580e-14993.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQG3_ECTSI3.800e-14084.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIN3_9STRA1.660e-8657.74EAP30/Vps36 family-domain-containing protein n=1 T... [more]
W7TGH7_9STRA4.120e-7753.23EAP30 family protein n=2 Tax=Monodopsidaceae TaxID... [more]
A0A067BX53_SAPPC1.260e-6848.22Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A7S2W3J7_9STRA1.390e-6547.50Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W4GXJ6_9STRA1.520e-6547.98Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A1X7VQK8_AMPQE2.050e-6551.74Vacuolar-sorting protein SNF8 n=1 Tax=Amphimedon q... [more]
A0A024U5E7_9STRA3.030e-6547.18Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7N0UU33_KALFE4.330e-6549.17Vacuolar protein sorting-associated protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10913contigL-elsbetiae_contig10913:668..4776 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score392.9
Seed ortholog evalue1e-106
Seed eggNOG ortholog2880.D8LQG3
Preferred nameSNF8
KEGG koko:K12188
KEGG Pathwayko04144,map04144
KEGG ModuleM00410
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000429,GO:0000430,GO:0000433,GO:0000578,GO:0000741,GO:0000742,GO:0000746,GO:0000747,GO:0000814,GO:0003002,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0005768,GO:0005770,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006403,GO:0006508,GO:0006511,GO:0006605,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006914,GO:0006996,GO:0006997,GO:0007032,GO:0007034,GO:0007154,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007350,GO:0007351,GO:0007389,GO:0007584,GO:0008022,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008298,GO:0008358,GO:0008593,GO:0008595,GO:0009056,GO:0009057,GO:0009605,GO:0009790,GO:0009798,GO:0009880,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009948,GO:0009952,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0009994,GO:0010008,GO:0010256,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010796,GO:0010797,GO:0010941,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016247,GO:0016482,GO:0016604,GO:0017157,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030154,GO:0030163,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032535,GO:0032879,GO:0032991,GO:0033036,GO:0033365,GO:0033620,GO:0034613,GO:0035282,GO:0036257,GO:0036258,GO:0036452,GO:0042058,GO:0042059,GO:0042176,GO:0042221,GO:0042493,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0043067,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043328,GO:0043632,GO:0043900,GO:0043903,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044764,GO:0045013,GO:0045014,GO:0045022,GO:0045184,GO:0045324,GO:0045450,GO:0045732,GO:0045892,GO:0045921,GO:0045934,GO:0045990,GO:0046015,GO:0046618,GO:0046907,GO:0046983,GO:0047485,GO:0048284,GO:0048468,GO:0048469,GO:0048471,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051036,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051503,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0055037,GO:0060255,GO:0060627,GO:0060810,GO:0060811,GO:0061635,GO:0061919,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0090066,GO:0097708,GO:0098588,GO:0098772,GO:0098796,GO:0098805,GO:0098927,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:1903530,GO:1903532,GO:1903541,GO:1903543,GO:1903772,GO:1903900,GO:1904669,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
EggNOG OGsKOG3341@1,KOG3341@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131,ko04147
Ec32 ortholog descriptionWinged helix-turn-helix DNA-binding domain
Ec32 orthologEc-10_005530.1
Exons5
Model size2677
Cds size675
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815309.9789739-UTR-L-elsbetiae_contig10913:667..18201622815309.9789739-UTR-L-elsbetiae_contig10913:667..1820Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10913 668..1820 +
1691682830.1241064-UTR-L-elsbetiae_contig10913:667..18201691682830.1241064-UTR-L-elsbetiae_contig10913:667..1820Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10913 668..1820 +
1622815310.0463526-UTR-L-elsbetiae_contig10913:3927..47761622815310.0463526-UTR-L-elsbetiae_contig10913:3927..4776Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10913 3928..4776 +
1691682830.1827812-UTR-L-elsbetiae_contig10913:3927..47761691682830.1827812-UTR-L-elsbetiae_contig10913:3927..4776Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10913 3928..4776 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815309.9929543-CDS-L-elsbetiae_contig10913:1820..19331622815309.9929543-CDS-L-elsbetiae_contig10913:1820..1933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 1821..1933 +
1691682830.1366224-CDS-L-elsbetiae_contig10913:1820..19331691682830.1366224-CDS-L-elsbetiae_contig10913:1820..1933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 1821..1933 +
1622815310.0049267-CDS-L-elsbetiae_contig10913:2491..26301622815310.0049267-CDS-L-elsbetiae_contig10913:2491..2630Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 2492..2630 +
1691682830.1450264-CDS-L-elsbetiae_contig10913:2491..26301691682830.1450264-CDS-L-elsbetiae_contig10913:2491..2630Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 2492..2630 +
1622815310.0150573-CDS-L-elsbetiae_contig10913:2985..30991622815310.0150573-CDS-L-elsbetiae_contig10913:2985..3099Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 2986..3099 +
1691682830.1532285-CDS-L-elsbetiae_contig10913:2985..30991691682830.1532285-CDS-L-elsbetiae_contig10913:2985..3099Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 2986..3099 +
1622815310.0271454-CDS-L-elsbetiae_contig10913:3404..35811622815310.0271454-CDS-L-elsbetiae_contig10913:3404..3581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 3405..3581 +
1691682830.1622539-CDS-L-elsbetiae_contig10913:3404..35811691682830.1622539-CDS-L-elsbetiae_contig10913:3404..3581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 3405..3581 +
1622815310.0366285-CDS-L-elsbetiae_contig10913:3795..39271622815310.0366285-CDS-L-elsbetiae_contig10913:3795..3927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 3796..3927 +
1691682830.1741216-CDS-L-elsbetiae_contig10913:3795..39271691682830.1741216-CDS-L-elsbetiae_contig10913:3795..3927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10913 3796..3927 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10913.829.1prot_L-elsbetiae_contig10913.829.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10913 1821..3927 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10913.829.1

>prot_L-elsbetiae_contig10913.829.1 ID=prot_L-elsbetiae_contig10913.829.1|Name=mRNA_L-elsbetiae_contig10913.829.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWA
EVLGVGDFYYELAVQIVEICLATRPVNGGLMALPELLQRLRTKGNRKARQ
TISADDVRRATSKLQVLGSGFAVLEIGKTTMVVSVPRELSSDHSAVLLLA
ESSGRITEADISERLQWAGSRPRRVLDELMQEGMAWVDGDGAGPAMGGGG
GHPAYFFPSLWQGERLLGEGVATG*
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mRNA from alignment at L-elsbetiae_contig10913:668..4776+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10913.829.1 ID=mRNA_L-elsbetiae_contig10913.829.1|Name=mRNA_L-elsbetiae_contig10913.829.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4109bp|location=Sequence derived from alignment at L-elsbetiae_contig10913:668..4776+ (Laminarionema elsbetiae ELsaHSoW15)
TTGATGTACCAACTTGTAGATGTGGGCATTATCGTCTTTTGCGTCACCCC
CGGGAGCATAAACGGACCTCCCAGTGGTTTTGAGATTTAAATTTAAGGAG
GCGCATGTGCGGGAGGGGGATACATAGGTAGGTAGAGTACCACCGTTTTT
GTCTCCCCCTTTTGTAAACACTGGTCTTCACTATGCTGGGGTGGCAAGGC
GACACAGAGAAGCGGAAAGCTCAGCGACGTGGACTTAATCCAAGAGGATG
CGTAAACAAGGTCCTTGGCTCGATGGTAGGACAGAACACTAGGCGTCAAG
TGGTTCATGACACTCTCGGCGTCGCGAGCTTTAGTGCTGAGATTAAGAGA
GAGAGGAGATAATTGCTATAGCACCGCCCCCGGAACGGGAACCTTGTATG
TTGTGTGTCGCCTACAACTTATTCCACATCTTTCTCTCGACAGACACCTA
GCTTGCACGTGTGGCTCCGTTTACCAGCAACGCTGCAAAGACGGCAGCAT
GGCTTCTTAGAAATAATGTCCTCACACCTGTCGTACCCACAACGTACTAT
TTTAGGCGGGGTTTTGGGGGTCCAACAGAAAACGGAAGTTGGCTTCGTAT
ATCCAATGGTTTACCACGATGATCCTGTACAGTACAGTATTATTGTGGTG
AACCATTAGATTGCGCAAGCAGTGTCTCCCAGGGCAGTAGTCTACAGCAG
CCTACGTACGGCAAATCCTCCAGCGTGCTGTACAGACATCTGGATACATG
TAGAACAAGGCGATGTTTCAGCCTGCACGGGAGAGGTGATATTGCGAACT
CTCTCGCCATTCCTCCCTCAGGTGTCGATTCCATCCTTGCCGTGCAAGCC
CCCCAAACTCCTCGAATTCTGGACTTTTTGTAGCTGCCGCCGCTCGCGCC
CCTGCGCTTGATCTTCTGGGATAAATAGCAACGTAGTGTTCGGGCGTTGT
GTGTTGTTGTTCGATGTCTATCAGGAAAACGCTCGTTGTTTTGAGGTTAT
TTTGCGCTGTACACTGTTGAAAAGCAACGTCACTTATAGAGTAGGGACGG
AAATAAGTCCTTCGCCGAAACCACCTGGAATGCTGCCTGCGCGCAGGCGT
TCGAGGCTGTCGGTAAGAAAGTCGCAGAGGAAAACCTGAGCCACATCTCC
GGCATGATGGCAACCTTCAAAGGCAGCTTGGAGGAGTTTGCGCGGAAATA
CAAGAAAGACATCAACCAGGACCCGGCTTTTCGGCAGCAGTTTCAAGTAA
TGTGCGCCAGCATCGGGTGAGAGAAACAGGGAGGAAAAGAGGAGCGAGGT
GGGGCATGAGTACTTGCGGATTGTTTGTGCAACCTCGCTCCGGTAAGTGT
GACCGAGCAGTAGGTCAATGGATGATGTCTAAGAATATTCGCGGTTGTCC
ACAGGTAAGAGACAGAGAGAGAGAGCGCTCTCGGGGGTCAAACAGAAAGC
CAGACCGTCAAACCGACACGTAACCGACAATGCCGAAGAGTCACACCGGC
ATGGGTACAAACGGCACGGCGCACTAGTGCTGACGGTGTCGGTGATGCGG
TAAAACAATAACTACTTTCGTAAAGGCGAGATGAGTTTTCGGTCGCGATG
GTCTGTAAAGCTGAAAGAAGGGTGCACATGCGTTTTTTGGGGTGTTTTCA
GCTGGTCTTCTCTTCTTCGCTGCTGTGTGGTATGGTGAAGCGTTTATTCC
GCAGCAGTACTACCTTATGTGTTATTAACCTGGATAAGGAGTAATCGCAC
GATTCGCTTGCGCAATAACTACCTTGACCGGGCCCCCGCTCCCCCTAACG
CTGAAAAATCTGTTTTGGAAACAGTGTCGACCCTCTGGCATCTAACAAGG
GCTTTTGGGCTGAGGTACTGGGTGTTGGCGATTTCTACTACGAACTCGCG
GTGCAAATTGTTGAGATTTGCCTTGCGACTCGGCCGGTGAATGGAGGGCT
TATGGCGCTGCCGGTGAGTACAAAGTCGTGGAGAACCGGAAATAGAGCGG
TTGGCGCCGGATACATGTGTGCATCGGGGTGGGGTTGAGGTTCAGACGCT
TATGAGGCATGGTGTGACAGAGGGTCCAAGGCTCGTTTTCATGACATTGC
TGTAGTCTTGTTGCGGCGCATGGTATCCGTGCAGCATGGTGGCGCGCACC
CCCTTAATCGACGAGTTTCTCTGTCGATGTCGTTATAGCGCCATGTCGCC
TGTACACCGCTGGCCTGTTTCCGTCTGGTGTATCCTTGGGTATCCTTGGG
GTACGGTACGTTGAGCCTATCGCCCCCACCCCCACCCCCATTGTGCATGC
GTGGGTGCACTTGAGCAGGAACTACTACAGCGCCTCCGGACGAAAGGAAA
CCGAAAAGCGCGACAAACCATTTCCGCGGATGACGTGAGAAGAGCAACAT
CGAAACTGCAAGTCCTCGGCAGCGGGTTCGCGGTGAGACAGACGGTTGCA
GTTCTATTGCCATGGTGGGACGGCGGGAAAAGAACGCCCTGTCGAACCCC
GACCGATGGATCCACACGATCGATTGTCACTCACGCTCATGCCGGTAGCA
CGCCTGGCCAAGTATCTAGTCTGCCGTCATTGTCACGTGCGAATGGGTGA
GTGTAGGTCACTCACCCTGCATTAGCCAACCCCGATTACTAAGTACTGCT
GCTGTTATTAAGCGGCGGGTGGCGAGGAGACACAAGCACACCCAATGCGT
TTGCCTTTGTCCCTTTCGCTACTGTTCACCGCCCAAGGTTCTCGAGATTG
GGAAGACCACCATGGTCGTGTCGGTTCCGCGCGAGCTAAGCTCCGACCAC
TCGGCAGTTCTCCTCTTGGCGGAATCCTCCGGCCGCATTACGGAAGCAGA
CATTTCGGAGAGGCTGCAATGGGCGGGAAGCCGCCCGCGTAGGGTGCTAG
ACGAGCTTATGCAGGTATGTACGTACATACATATGTGTTCGGGGATTTTC
TGCACCAGATATCTCGCGAAACGCAGCTTGTCTTGTCGGTTGGATCTCAG
TGCCACTGCATGTGCGCTCGTGCCGATGCGCGTGTTGCTCACAAGGTGCA
TGCGTGTTCCACTTAAGTCTCCCCCTGACTCTAAAAAAAGTCGTGTTCTG
GTTTGCCGCGCACGCCCGTGGCCCACAGGAAGGGATGGCGTGGGTGGATG
GCGACGGTGCAGGACCCGCGATGGGGGGCGGAGGTGGCCACCCGGCGTAC
TTCTTCCCAAGCCTGTGGCAAGGCGAGCGCTTATTGGGCGAAGGTGTCGC
GACCGGATAAACCAGATCCATCACGGCACATCTCCCTGACGACGATGTTG
GTTGTACGGGCTAAGAGTGTTGCCGTGTTCGGCTGCATATAGAGAGAGAG
AGATGGGGTTGTAGGTTCCCTGAAGCTGCTTCCTTAGCTTTTCTAGCTCG
CAGTCTCTGTGCGTAGTCTAAGCACGAGGAACAATCGTCGTGTATTTTGG
GGTAAATGTTCGCCTCCACACATCAGTCCTACGTGCTAAGAATGTTGCCG
TGTTCGGCTGCATGTATATCTGTTGCTTGACGAGAGCGCCGGTAGCATAT
CCGTCTTCGTGGCAGAGCAGTATGTATGAGGGGTGGCTGCAGCCTGTTGA
TGCGGCGCAGTTAAAAGCCGATTGTTTCACATGTAGTACCCTGGAAGGCT
CTCTGATCATTTGGCCCCTGGGTTTGGGGGACCATCACGTTTAGTGACTG
CTAGACCACCCCGCGGGTCGGTGTCATTTCGTCGGCTCGGATTAAAATGC
GACCGCGCAAAACGTCTCCAGGCATTTCGCTCGCCGTGACGCAGGACGTC
TTGGTGTTGTATCGCTGGGCATGTCGTTGCTTCTTGGGACCCACTTCGCG
CAAGTAAATGCGTTTTGTGGTGCTAGTGGGTTTGTGAAGGAGTTGGTGCG
ATTGTTTTGTTTTACTACAAAATATTGCCCAAGGTACTACTGTAGGTGCC
CACGGCGCTTCCAGGTTTTACTTGGAGTTTCAGAGCAAAATGAGAGCGAC
ATCAGAATGGTCCGTTCGAGGGCGACCAGGTTCCAAGAGGGAGAGGGAGG
CTGATGTACACGTCACAATATAGCAGCAATGATGAACGGAATATATACGT
CAAACCGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10913:668..4776+

>mRNA_L-elsbetiae_contig10913.829.1 ID=mRNA_L-elsbetiae_contig10913.829.1|Name=mRNA_L-elsbetiae_contig10913.829.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig10913:668..4776+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGGCAACCTTCAAAGGCAGCTTGGAGGAGTTTGCGCGGAAATACAA
GAAAGACATCAACCAGGACCCGGCTTTTCGGCAGCAGTTTCAAGTAATGT
GCGCCAGCATCGGATGATGGCAACCTTCAAAGGCAGCTTGGAGGAGTTTG
CGCGGAAATACAAGAAAGACATCAACCAGGACCCGGCTTTTCGGCAGCAG
TTTCAAGTAATGTGCGCCAGCATCGGTGTCGACCCTCTGGCATCTAACAA
GGGCTTTTGGGCTGAGGTACTGGGTGTTGGCGATTTCTACTACGAACTCG
CGGTGCAAATTGTTGAGATTTGCCTTGCGACTCGGCCGGTGAATGGAGGG
CTTATGGCGCTGCCGTGTCGACCCTCTGGCATCTAACAAGGGCTTTTGGG
CTGAGGTACTGGGTGTTGGCGATTTCTACTACGAACTCGCGGTGCAAATT
GTTGAGATTTGCCTTGCGACTCGGCCGGTGAATGGAGGGCTTATGGCGCT
GCCGGAACTACTACAGCGCCTCCGGACGAAAGGAAACCGAAAAGCGCGAC
AAACCATTTCCGCGGATGACGTGAGAAGAGCAACATCGAAACTGCAAGTC
CTCGGCAGCGGGTTCGCGGAACTACTACAGCGCCTCCGGACGAAAGGAAA
CCGAAAAGCGCGACAAACCATTTCCGCGGATGACGTGAGAAGAGCAACAT
CGAAACTGCAAGTCCTCGGCAGCGGGTTCGCGGTTCTCGAGATTGGGAAG
ACCACCATGGTCGTGTCGGTTCCGCGCGAGCTAAGCTCCGACCACTCGGC
AGTTCTCCTCTTGGCGGAATCCTCCGGCCGCATTACGGAAGCAGACATTT
CGGAGAGGCTGCAATGGGCGGGAAGCCGCCCGCGTAGGGTGCTAGACGAG
CTTATGCAGGTTCTCGAGATTGGGAAGACCACCATGGTCGTGTCGGTTCC
GCGCGAGCTAAGCTCCGACCACTCGGCAGTTCTCCTCTTGGCGGAATCCT
CCGGCCGCATTACGGAAGCAGACATTTCGGAGAGGCTGCAATGGGCGGGA
AGCCGCCCGCGTAGGGTGCTAGACGAGCTTATGCAGGAAGGGATGGCGTG
GGTGGATGGCGACGGTGCAGGACCCGCGATGGGGGGCGGAGGTGGCCACC
CGGCGTACTTCTTCCCAAGCCTGTGGCAAGGCGAGCGCTTATTGGGCGAA
GGTGTCGCGACCGGATAAGAAGGGATGGCGTGGGTGGATGGCGACGGTGC
AGGACCCGCGATGGGGGGCGGAGGTGGCCACCCGGCGTACTTCTTCCCAA
GCCTGTGGCAAGGCGAGCGCTTATTGGGCGAAGGTGTCGCGACCGGATAA
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