mRNA_L-elsbetiae_contig10895.817.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: D7G316_ECTSI (Inversin protein alternative isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G316_ECTSI) HSP 1 Score: 159 bits (401), Expect = 9.010e-38 Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1 Query: 1 IDMEAEKRKELKELLTAFIDGDLQTPPLCTAATKGDVGLVVALLDKFKADKNCKDNVGETPLMKAADNDHLPVVEALLDAGVDVNITTSESISALHI 291 IDMEA+ RKE+KELLTAFIDGD++TPPLCTAATKG+ GLV+ALLD F ADKN KDNVGETPLMKAAD HLPVVEALLDAGVDV ITT +SISALH+ Sbjct: 250 IDMEAKTRKEMKELLTAFIDGDVKTPPLCTAATKGNAGLVMALLDNFGADKNFKDNVGETPLMKAADKGHLPVVEALLDAGVDVAITTDQSISALHL 346
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: D7FKZ6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ6_ECTSI) HSP 1 Score: 123 bits (309), Expect = 3.460e-26 Identity = 85/104 (81.73%), Postives = 89/104 (85.58%), Query Frame = 1 Query: 1414 VRLLLTRAPADRAWRRRGWLVMLRSRTLKARAAGGDXXXXXXXXXXXXXXXXXXXXXRSVKQRGGADEETNGCGGGKGGFDLFAAVAQLGLMEEGVFRNVVGFL 1725 +RLLL RAPADRAWRRRGWLVMLRSRTL+ RAAGGDXXXXXXXXXXXXXXX RSVKQRGG+DEETN G KG FDL AAVAQLGL+EEGVFRNVV FL Sbjct: 474 LRLLLARAPADRAWRRRGWLVMLRSRTLEVRAAGGDXXXXXXXXXXXXXXX------RSVKQRGGSDEETNEVGSEKGSFDLSAAVAQLGLIEEGVFRNVVCFL 571
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: D8LP40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP40_ECTSI) HSP 1 Score: 111 bits (277), Expect = 2.410e-23 Identity = 58/89 (65.17%), Postives = 69/89 (77.53%), Query Frame = 1 Query: 28 ELKELLTAFIDGDLQTPPLCTAATKGDVGLVVALLDKFKADKNCKDNVGETPLMKAADNDHLPVVEALLDAGVDVNITTSESISALHIA 294 ELKELL AF+DG +TPPLCTAA +GDV LV+ LLDK + DKN KD G+TPL+ AA DH+PVVEALL AGVDV+ T S +ALH+A Sbjct: 6 ELKELLNAFVDGGFKTPPLCTAAQQGDVELVILLLDKVQVDKNSKDPSGDTPLILAARGDHMPVVEALLAAGVDVD-TISTDGTALHVA 93
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: D7FKZ9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ9_ECTSI) HSP 1 Score: 107 bits (267), Expect = 2.550e-21 Identity = 57/79 (72.15%), Postives = 57/79 (72.15%), Query Frame = 3 Query: 1416 APPADPGSGRQGVAPSGLARHASFAHPEGEGSRWRRRLGWFKWRRW*RWRRRCCGSAFGEAAGRG*RGDERVWRREGGL 1652 APPA PGS RQGVAP GLARHASFAHPEGEGS WRRRLGWFK RRCCG A EAAGRG WRREGGL Sbjct: 357 APPAGPGSRRQGVAPPGLARHASFAHPEGEGSWWRRRLGWFKXXXXXXXXRRCCGGALREAAGRG-------WRREGGL 428
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 1.310e-13 Identity = 67/159 (42.14%), Postives = 74/159 (46.54%), Query Frame = 1 Query: 1255 FGGTALHHAVD--SVDVVSRLXXXXXXXXXXXXRGMTPVEGIDDSIDELKAQHEAVRLLLTRAPADRAWRRRGWLVMLRSRTLKARAAGGDXXXXXXXXXXXXXXXXXXXXXRSVKQRGGADEETNGCGGGKGGFDLFAAVAQLGLMEEGVFRNVVGFL 1725 FG T LHHA D D V RL G D++ VR LL ADRAWRRRGWLVMLR RTLKA GG RS KQRGG+ GGG+ F+L AV LG++EEGVFRNVV FL Sbjct: 303 FGSTPLHHACDYSQSDAVLRLLLQA---------------GADENALNDDGDTPGVRELL----ADRAWRRRGWLVMLRLRTLKAGGDGG------------------AAGARSAKQRGGS-------GGGEESFNLSEAVEWLGVVEEGVFRNVVSFL 417
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 3.100e-7 Identity = 54/138 (39.13%), Postives = 67/138 (48.55%), Query Frame = 1 Query: 1357 TPVEGIDDSIDE------LKAQHEAVRLLLTRAPADRAWRRRGWLVMLRSRTLKARA---AGGDXXXXXXXXXXXXXXXXXXXXXRSVKQRGGA-DEETNGCGGG-----KGGFDLFAAVAQLGLMEEGVFRNVVGFL 1725 TPV+ +D+ DE +A+ E VRLLL RAPA+RAWR R WLVMLRS ARA A GD + + GG NG G G GG+ A + +GL E VFR++VGFL Sbjct: 316 TPVDMLDEHDDENDGTTCSEAEFERVRLLLARAPANRAWRHRCWLVMLRSCAKTARANSDATGDADEDSNDARDRKVGKCKGARRENGESAGGGVRSRMNGAGEGGVERRAGGWASVVA-SVIGLGPEEVFRSIVGFL 452
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 2.780e-6 Identity = 74/177 (41.81%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 1258 GGTALHHA----VDSVDV-VSRLXXXXXXXXXXXXRGMTPVEGIDDSIDE------LKAQHEAVRLLLTRAPADRAWRRRGWLVMLRSRTLKARA---AGGDXXXXXXXXXXXXXXXXXXXXXRSVKQRGG-ADEETNGCGGGKGGFDLFAAV------AQLGLMEEGVFRNVVGFL 1725 GGT LH A V V+ V L TP + +D+ +E +A+ E VRLL+ RAPA+RAWRRR WLVMLRS ARA A GD XXXXXXXXXXXX + + GG NG G + G D+ AA + +GL E VFR++VGFL Sbjct: 257 GGTPLHWACYWQVRGVEATVDLLLRWGADETALDNDSKTPADLLDEDDNENDRTTCSEAEIEQVRLLMARAPANRAWRRRCWLVMLRSYAKTARATTEATGDADEGSKXXXXXXXXXXXXARRENGESAGGWLRSRMNGAG--EVGVDIGAAGLASIVNSVVGLEPEEVFRSIVGFL 431
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: A0A6H5K513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K513_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 5.640e-6 Identity = 58/170 (34.12%), Postives = 72/170 (42.35%), Query Frame = 1 Query: 1258 GGTALH---HA----VDSVDVVSRLXXXXXXXXXXXXRGMTPVEGIDDSIDELK---AQHEAVRLLLTRAPADRAWRRRGWLVMLRSRTLKARAAGGDXXXXXXXXXXXXXXXXXXXXX---RSVKQRGGADEETNGCGGGKGGFDLFAAVAQL-GLMEEGVFRNVVGFL 1725 G TALH HA VD D V L TPV+ + + E+ + + LL RAPADRAWRRRGWLVML RT K R GD ++ ++RGGA + DL V L GL EGVFR +VG++ Sbjct: 341 GSTALHLAGHARGYKVD--DTVDTLLRWGASEQAVDENDETPVDRLTEVAREVVWEWPELDRALELLARAPADRAWRRRGWLVMLHERTKKERHVRGDRPRKGEKVGSGEEVLLGDGERGRGKNARRRGGAAVKA----------DLRGVVNVLVGLESEGVFRTIVGYV 498
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 1.730e-5 Identity = 50/148 (33.78%), Postives = 57/148 (38.51%), Query Frame = 1 Query: 1408 EAVRLLLTRAPADRAWRRRGWLVMLRSRTLKAR------------------------------------------AAGGDXXXXXXXXXXXXXXXXXXXXXRSVKQRGGADEETNGCGGGKGGFDLFAAVAQLGLMEEGVFRNVVGFL 1725 + RLLL+RAPADRAWRRRGWLVMLRSR KA+ AGG+ +SV D G GG+ G L + LGL EGVFR VVGFL Sbjct: 80 DRTRLLLSRAPADRAWRRRGWLVMLRSRDSKAQEGKCRSSGGYDHGDGGEVGGSEMARSEGMAGADYGRPGTTRNGAGGEVEAGGGEEVQDIAAGLLGLRRKSVVHTASNDGCVVGAEGGEEGLRL-EVLLLLGLGLEGVFRAVVGFL 226
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Match: A0A1B8AML7_FUSPO (Dilute domain-containing protein n=69 Tax=Fusarium TaxID=5506 RepID=A0A1B8AML7_FUSPO) HSP 1 Score: 58.5 bits (140), Expect = 3.000e-5 Identity = 46/124 (37.10%), Postives = 60/124 (48.39%), Query Frame = 1 Query: 10 EAEKRKELKELLTAFIDGDLQTPPLCTAATKGDVGLVVALLD---KFKADKNCKDNVGETPLMKAADNDHLPVVEALLDAGVDVNITTSESISALHIAATRGFDGIADALLKNGAGKDACDNTG 372 E EK+++L++ L AA+ GDV + LL K D N +D G PL+ A+ H PVV+AL+DAG DVN +AL A T GIA LL N A D +TG Sbjct: 123 ETEKKEKLQKALNM-------------AASNGDVDRIRKLLGGKAKEYLDLNAEDEDGTPPLIYASCFGHEPVVQALIDAGADVNKQDRNQWTALMWAMTNRHKGIAKLLLDNNASSDQKTSTG 233 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10895.817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10895.817.1 >prot_L-elsbetiae_contig10895.817.1 ID=prot_L-elsbetiae_contig10895.817.1|Name=mRNA_L-elsbetiae_contig10895.817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=574bp MEAEKRKELKELLTAFIDGDLQTPPLCTAATKGDVGLVVALLDKFKADKNback to top mRNA from alignment at L-elsbetiae_contig10895:471..2297+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10895.817.1 ID=mRNA_L-elsbetiae_contig10895.817.1|Name=mRNA_L-elsbetiae_contig10895.817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1827bp|location=Sequence derived from alignment at L-elsbetiae_contig10895:471..2297+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10895:471..2297+ >mRNA_L-elsbetiae_contig10895.817.1 ID=mRNA_L-elsbetiae_contig10895.817.1|Name=mRNA_L-elsbetiae_contig10895.817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3444bp|location=Sequence derived from alignment at L-elsbetiae_contig10895:471..2297+ (Laminarionema elsbetiae ELsaHSoW15)back to top |