mRNA_L-elsbetiae_contig10890.815.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI) HSP 1 Score: 104 bits (259), Expect = 2.380e-23 Identity = 63/138 (45.65%), Postives = 79/138 (57.25%), Query Frame = 1 Query: 4 ECDFDGRSTASPLRDAGVPSPTSP----PPETVSAGSQCHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVDAAGRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEVRSSDGEFVYTGPTLKV 405 ECDF+GR T PT P PP S QCH F GL + GQ +LR A F VDS + V K P+++ + GRA+A V YPSM IWPE+Y+ +IRV+EV +VVE+RS GE+ Y GP LKV Sbjct: 383 ECDFEGRPTP----------PTDPKSGEPPIPSSTDRQCHLVFTGLNNTGQ--DLRSLRVTAHFGVDSVHK--VGKVTSPIQLGSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSGEYQYVGPQLKV 506
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: A0A6H5JYP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYP1_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 4.560e-20 Identity = 71/167 (42.51%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 1 QECDFDGRSTASPLRDA-GVPSPTS-----PPPETVSAG-----------SQCHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVDAA---------------GRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEVRSSDGEFVYTGPTLKV 405 QECDFDG A+P + G+P PT+ P P A ++C F GL S ELRD ARF VD P + V ++ PL+ A GRA AAV +PS++ IWPEVY VD+IRV+EV +VVEVRSS+G +YTGPTLK+ Sbjct: 597 QECDFDGNCAATPSKPPRGLP-PTAATSFFPDPSAAVAACTSRPSSNYLNNRCRLAFLGLES-----ELRDVTVCARFSVD-PASRVERFASLPLDGAAGXXXXXDPAGVVGGRRGRADAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSEGNILYTGPTLKL 756
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: D8LCK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK7_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 7.240e-19 Identity = 58/125 (46.40%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 91 SAGSQCHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVDAA-----------------GRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEVRSSDGEFVYTGPTLKVCSR 414 S ++C F F GL S E+RDF ARF VD P + V ++ PL+ A GR AAV +PS++ IWPEVY VD+IRV+EV +VVEVRSSDG +YTGPTLK+ R Sbjct: 504 SLNNRCRFAFLGLES-----EIRDFTVCARFSVD-PASRVERFASLPLDGAAGXXXXXXXDPAGAVGGRRGRVDAAVEFPSIMEIWPEVYKVDNIRVMEVDMVVEVRSSDGNILYTGPTLKITYR 622
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: A0A6H5K0L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L1_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 8.660e-18 Identity = 60/145 (41.38%), Postives = 82/145 (56.55%), Query Frame = 1 Query: 1 QECDFDGRSTASPLRDAGVPSPTSPPPETVSAGSQ----CHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVD---AAGRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEVRSSDGEFVYTGPTLKVCSR 414 QECDFDGRS A+ S TS V A S C F+G+ G +RD A A+F V P +V + LE D AG + +TYPSM +IWPEVY+ S++V+EV + V+VRSSDG++V++ P++KV R Sbjct: 435 QECDFDGRSAAA----VPAASATSASANGVCASSSTKKPCRLRFKGIEGVDYG--IRDLAVTAQFSVGPPGN-LVGTAPTNLEADRNACAGSSSCTITYPSMEDIWPEVYSARSVKVVEVDMTVDVRSSDGKWVHSWPSVKVMYR 572
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: D7G7N4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N4_ECTSI) HSP 1 Score: 76.3 bits (186), Expect = 1.270e-14 Identity = 55/136 (40.44%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 1 QECDFDGRSTASPLRDAGVPSPTSPPPETVSAGSQCHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVDAAGRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEVRSSDG-EFVYTGPTLKV 405 +ECDF+GR PL G S +P S G H F GL G + R F VD+ + S P++V A GRA++ V YPS+ +WPE+Y +R +EV V VEV S DG EF Y GP LKV Sbjct: 54 KECDFEGR----PLPGGG--SGMTPSSTVSSNGRDTHVVFTGLNDTGH--DPRGLRVTVIFGVDAVHQIACVTS--PIQVAADGRAYSRVFYPSLEEVWPELYYTVDVRAVEVDVAVEVLSDDGREFRYVGPHLKV 179
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: A0A6H5JDQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ6_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 1.510e-13 Identity = 54/136 (39.71%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 1 QECDFDGRSTASPLRDAGVPSPTSPPPETVSAGSQCHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVDAAGRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEVRSSDG-EFVYTGPTLKV 405 +ECDF+GR PL G S +P S G H F GL + G + R F VD+ + S P++V A GRA++ V YPS+ ++WPE+Y +R +EV V VE+ S DG EF Y GP LKV Sbjct: 232 KECDFEGR----PLPGGG--SGMTPSSTVSSNGRDTHVVFTGLHNTGH--DPRGLRVTVIFGVDAVHQIACVTS--PVQVAADGRAYSRVFYPSLEDVWPELYYTVDVRAVEVDVAVEILSDDGREFRYVGPHLKV 357
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI) HSP 1 Score: 71.6 bits (174), Expect = 5.250e-12 Identity = 51/138 (36.96%), Postives = 74/138 (53.62%), Query Frame = 1 Query: 1 QECDFDGRSTASPLRDAGVPSPTSPPPETVSAGSQCHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVDAAGRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEVRSSDGEFVYTGPTLKVCSR 414 ++ DF+GR T P + + SP + + + H F GL G+ L AA A+F + A E+ GPL+ + GR + AV YPSM +WPEVYN +IRV++V ++VEVRS G+ +Y LK R Sbjct: 207 EDFDFEGR-TIEPNKPSD--SPFAAAFSVPRSDDEQHLVFIGLGETGR--PLPTLAARAQFSANPGRKA--ERMVGPLQAGSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSLYLATELKAMYR 337
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 2.000e-10 Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = 1 Query: 1 QECDFDGRSTASPLRDAGVPSPTSPPPETVSAGSQCHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVDAA--GRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEVRSSDGEFVYTGPTLKVCSR 414 ++ DF+GR T P + +G SP + + + + F GL G+ L AA A+F + A E+ GPL+ A GR + AV YPSM +WPEVYN +IRV++V ++VEVRS G+ +Y L R Sbjct: 289 EDFDFEGR-TIEPNKPSG--SPFAAALSVPRSDDEQYLVFIGLGETGR--PLPALAARAQFSANPGRQA--ERMVGPLQARAGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSLYLATELMAMYR 421
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: D7G6J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J1_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 2.680e-10 Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 1 Query: 1 QECDFDGRSTASPLRDAGVPSPTSPPPETVSAGSQCHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVDAAGRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEVRSSDGEFVYTGPTLKVCSR 414 Q CDF GR+ A P +++ VPS + +S + H F GL G G L F ++S + ++AGP++V R + AV YP+M +WPE+Y ++ V++V V + VRS Y G LKV R Sbjct: 4 QVCDFHGRAVAHP-QESVVPSALAAC--FMSGSLEQHLVFTGL--VGAGPHLDYLTTTVYFSINSGRP--LARAAGPMQVGEDERVYVAVKYPTMNELWPEIYQNVAVEVVQVDVFITVRSGHKTIRYPGTELKVTYR 134
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Match: A0A6H5L4C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C2_9PHAE) HSP 1 Score: 50.8 bits (120), Expect = 1.650e-5 Identity = 31/90 (34.44%), Postives = 48/90 (53.33%), Query Frame = 1 Query: 88 VSAGSQCHFTFQGLRSAGQGCELRDFAAWARFFVDSPNAAVVEKSAGPLEVDAAGRAHAAVTYPSMLNIWPEVYNVDSIRVIEVAVVVEV 357 +S + H F L AG L F + + ++ +E++ GP++V GR + AV PS+ +WPE+YN SIRV++V V V V Sbjct: 26 LSGSREQHLVFTELDGAGP--HLAHLTPTVHFSITAGHS--LERAGGPMQVRKDGRVYVAVKCPSISELWPEIYNNRSIRVVQVDVYVTV 111 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10890.815.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10890.815.1 >prot_L-elsbetiae_contig10890.815.1 ID=prot_L-elsbetiae_contig10890.815.1|Name=mRNA_L-elsbetiae_contig10890.815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp QECDFDGRSTASPLRDAGVPSPTSPPPETVSAGSQCHFTFQGLRSAGQGCback to top mRNA from alignment at L-elsbetiae_contig10890:5432..6205+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10890.815.1 ID=mRNA_L-elsbetiae_contig10890.815.1|Name=mRNA_L-elsbetiae_contig10890.815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=774bp|location=Sequence derived from alignment at L-elsbetiae_contig10890:5432..6205+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10890:5432..6205+ >mRNA_L-elsbetiae_contig10890.815.1 ID=mRNA_L-elsbetiae_contig10890.815.1|Name=mRNA_L-elsbetiae_contig10890.815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=828bp|location=Sequence derived from alignment at L-elsbetiae_contig10890:5432..6205+ (Laminarionema elsbetiae ELsaHSoW15)back to top |