mRNA_L-elsbetiae_contig1089.811.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1089.811.1
Unique NamemRNA_L-elsbetiae_contig1089.811.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: A0A6H5KWT8_9PHAE (Ribosomal_S7 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWT8_9PHAE)

HSP 1 Score: 434 bits (1115), Expect = 5.910e-152
Identity = 226/233 (97.00%), Postives = 228/233 (97.85%), Query Frame = 3 
Query:   24 MATELNPDGWDGGEPVVADET--AEEWGEPE-EAPLAVEESGISDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            MATELNPDGWDGGEPVVAD+   AE WGEPE EAPLAVEESGISDVQLFNKW+FDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR
Sbjct:    1 MATELNPDGWDGGEPVVADDAGAAEGWGEPEVEAPLAVEESGISDVQLFNKWSFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 233
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BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: A0A7S3V821_9STRA (Hypothetical protein n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3V821_9STRA)

HSP 1 Score: 335 bits (860), Expect = 2.610e-113
Identity = 168/218 (77.06%), Postives = 196/218 (89.91%), Query Frame = 3 
Query:   63 EPVVADETA-EEWGEPEEAPLAVEESGISDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            EP+V + T  EE  E EE P  V ++G ++++LF KW+FD+IE+RDISLEDYIA KG +ATYLPHTAGRYQ KRFRKA+CPIVERL C LM+KGRNSGKK+MA RIV+HTLEIIH+LTDQNP+Q++VDAVINSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYLI TGARE+SFRN+KT+AECLA+E+INAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:    6 EPIVEETTYDEEVEEVEEEPEFVGDAGGAEIKLFGKWSFDEIEVRDISLEDYIACKGDHATYLPHTAGRYQMKRFRKASCPIVERLACCLMKKGRNSGKKIMATRIVQHTLEIIHILTDQNPIQIVVDAVINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLIATGAREASFRNLKTMAECLAEELINAARGSSNSYAIKKKDEIERVSKSNR 223
[Close]
BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: B8CC69_THAPS (RS5, ribosomal protein 5 n=10 Tax=Ochrophyta TaxID=2696291 RepID=B8CC69_THAPS)

HSP 1 Score: 332 bits (851), Expect = 5.110e-112
Identity = 167/213 (78.40%), Postives = 188/213 (88.26%), Query Frame = 3 
Query:  102 EPEEAPLAVEE---------SGISDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            +P E P+ VE           G ++V+LF KW+FDDIEIRDISL DYIA KG +ATYLPHTAGRYQKKRFRKA+CPIVERL C LMRKGRNSGKKLMA RIV+HTLEIIHLLTDQNPVQV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYL+ TGARE+SFRN+KT+AECLA+E++NAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:    6 DPIEEPVEVEXXXXXEFVAVGGATEVKLFGKWSFDDIEIRDISLVDYIACKGDHATYLPHTAGRYQKKRFRKASCPIVERLACCLMRKGRNSGKKLMAVRIVQHTLEIIHLLTDQNPVQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTVAECLAEELVNAARGSSNSYAIKKKDEIERVSKSNR 218
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BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: W7TXQ4_9STRA (Ribosomal protein S7, conserved site n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXQ4_9STRA)

HSP 1 Score: 327 bits (838), Expect = 4.350e-110
Identity = 165/204 (80.88%), Postives = 186/204 (91.18%), Query Frame = 3 
Query:  102 EPEEAPLAVEESGISDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            EP +  +A E++  +D++LF KW+  D+EI+D+SLEDYI V GK ATYLPHTAGRYQKKRFRKA CP+VERL  +LMRKGRNSGKKL A RIVKHTLEIIHLLTDQNPVQV+VD++IN+GPREDSTRVGSAGVVRRQAVD+SPFRRVNQA+YLITTGARESSFRNIKTIAE LADEIINAA+GSSNSYAIKKKDE+ERVAKANR
Sbjct:   13 EPADMAVAFEDNS-ADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLTANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 215
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BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: F0XZC6_AURAN (Ribosomal_S7 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XZC6_AURAN)

HSP 1 Score: 325 bits (833), Expect = 1.250e-109
Identity = 158/190 (83.16%), Postives = 177/190 (93.16%), Query Frame = 3 
Query:  144 SDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            S+++LF KWT+DD+E+ DISLEDYIAVKGK++ YLPHTAGRYQKKRFRKA CPI ERL CALMRKGRN+GKKL A RIV+ TLEI+HLLTDQNPVQVLV A++ SGPREDSTRVGSAGVVRRQAVD+SPFRRVN ALYL+ TGARE++FRN+KTIAECLADE+INAARGSSNSYAIKKKDEIERVAKANR
Sbjct:    6 SEIKLFGKWTYDDVEVNDISLEDYIAVKGKHSVYLPHTAGRYQKKRFRKALCPITERLVCALMRKGRNNGKKLKAVRIVQSTLEIVHLLTDQNPVQVLVQAILQSGPREDSTRVGSAGVVRRQAVDMSPFRRVNMALYLLCTGAREAAFRNVKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 195
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BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: A0A6V2ER46_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ER46_9STRA)

HSP 1 Score: 326 bits (835), Expect = 2.330e-109
Identity = 162/202 (80.20%), Postives = 184/202 (91.09%), Query Frame = 3 
Query:  108 EEAPLAVEESGISDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            EE    V  +G  +V+LF KW+FD+IE+RDISL DYIA KG +ATYLPHTAGRYQKKRFRKA+CPIVERL C LMRKGRN+GKKLMA RIV+HTLEIIHLLTDQNP+QV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYL+ TGARE+SFRN+KT+AECLA+E+INAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:   33 EEVEYEVANAG-PEVKLFGKWSFDEIEVRDISLVDYIACKGDHATYLPHTAGRYQKKRFRKASCPIVERLACCLMRKGRNAGKKLMAVRIVQHTLEIIHLLTDQNPIQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTMAECLAEELINAARGSSNSYAIKKKDEIERVSKSNR 233
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BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: D8TJL0_VOLCA (Component of cytosolic 80S ribosome and 40S small subunit n=2 Tax=Viridiplantae TaxID=33090 RepID=D8TJL0_VOLCA)

HSP 1 Score: 324 bits (831), Expect = 2.340e-109
Identity = 157/189 (83.07%), Postives = 178/189 (94.18%), Query Frame = 3 
Query:  147 DVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            DV+LF KW+F+DIE++DISLEDYIAVK KYA Y+PHTAGRYQKKRFRKA CPIVERLC +LM  GRN+GKKLMA RIVKH  +IIHLLTDQNP+QVLVDA+INSGPRED+TR+GSAGVVRRQAVD+SP RRVNQA+YL+TTGARE++FRNIKTIAECLADE++NAA+GSSNSYAIKKKDEIERVAKANR
Sbjct:    5 DVKLFGKWSFEDIEVQDISLEDYIAVKTKYAVYVPHTAGRYQKKRFRKALCPIVERLCNSLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVLVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKKDEIERVAKANR 193
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BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: A0A835ZGP4_9STRA (Ribosomal protein S7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP4_9STRA)

HSP 1 Score: 324 bits (830), Expect = 3.320e-109
Identity = 159/190 (83.68%), Postives = 181/190 (95.26%), Query Frame = 3 
Query:  144 SDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            S+++LFNKW++DDIEI DISL DY+AV  K+AT+LPHTAGRYQKKRFRKA CP++ERL  +LMRKGRNSGKKL+AAR+V+ T+EIIHLLTD+NP+Q LV+AVIN+GPREDSTRVGSAGVVRRQAVDLSPFRRVNQA+YL+TTGARESSFRNIKTIAECLADEIINA+RGSSNSYAIKKKDEIERVAKANR
Sbjct:    4 SEIKLFNKWSYDDIEIEDISLSDYLAVGTKHATFLPHTAGRYQKKRFRKAACPLIERLTVSLMRKGRNSGKKLLAARVVRSTMEIIHLLTDENPLQTLVNAVINAGPREDSTRVGSAGVVRRQAVDLSPFRRVNQAIYLLTTGARESSFRNIKTIAECLADEIINASRGSSNSYAIKKKDEIERVAKANR 193
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BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: A0A7S4N0H9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N0H9_9STRA)

HSP 1 Score: 325 bits (833), Expect = 4.370e-109
Identity = 158/192 (82.29%), Postives = 179/192 (93.23%), Query Frame = 3 
Query:  138 GISDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            G ++V+LF KW+FDD+E+RDISL DYIA  G +A +LPHTAGRYQKKRFRKA+CPIVERL C LM+KGRNSGKKLMA RIV+HTLEIIHLLTDQNP+QV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYLI TGARE+SFRN+KT+AECLA+E+INAARGSSNSYAIKKKDEIERVAK+NR
Sbjct:   40 GATEVKLFGKWSFDDVEVRDISLVDYIACTGDHAVFLPHTAGRYQKKRFRKASCPIVERLACCLMKKGRNSGKKLMACRIVQHTLEIIHLLTDQNPIQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLIATGAREASFRNLKTMAECLAEELINAARGSSNSYAIKKKDEIERVAKSNR 231
[Close]
BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Match: A0A7S1CV61_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CV61_CYCTE)

HSP 1 Score: 325 bits (834), Expect = 1.070e-108
Identity = 159/202 (78.71%), Postives = 184/202 (91.09%), Query Frame = 3 
Query:  108 EEAPLAVEESGISDVQLFNKWTFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 713
            EE    V   G ++++LF KW+FDDIEIRDISL DYIA KG +ATYLPHTAGRYQKKRFRKA+CPI+ERL C LM+KGRNSGKKLMA R+++HTLEIIHLLTDQNP+QV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYL+ TGARE+SFRN+KT+AECLA+E++NAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:   66 EEEDEFVAVGGAAEIKLFGKWSFDDIEIRDISLVDYIACKGDHATYLPHTAGRYQKKRFRKASCPILERLACCLMKKGRNSGKKLMACRLLQHTLEIIHLLTDQNPMQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTMAECLAEELVNAARGSSNSYAIKKKDEIERVSKSNR 267
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1089.811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWT8_9PHAE5.910e-15297.00Ribosomal_S7 domain-containing protein n=2 Tax=Ect... [more]
A0A7S3V821_9STRA2.610e-11377.06Hypothetical protein n=3 Tax=Bacillariophyta TaxID... [more]
B8CC69_THAPS5.110e-11278.40RS5, ribosomal protein 5 n=10 Tax=Ochrophyta TaxID... [more]
W7TXQ4_9STRA4.350e-11080.88Ribosomal protein S7, conserved site n=2 Tax=Monod... [more]
F0XZC6_AURAN1.250e-10983.16Ribosomal_S7 domain-containing protein n=2 Tax=Pel... [more]
A0A6V2ER46_9STRA2.330e-10980.20Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
D8TJL0_VOLCA2.340e-10983.07Component of cytosolic 80S ribosome and 40S small ... [more]
A0A835ZGP4_9STRA3.320e-10983.68Ribosomal protein S7 domain-containing protein n=1... [more]
A0A7S4N0H9_9STRA4.370e-10982.29Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1CV61_CYCTE1.070e-10878.71Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1089contigL-elsbetiae_contig1089:8434..13968 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score428.7
Seed ortholog evalue1.7e-117
Seed eggNOG ortholog2880.D7G1X8
Preferred nameRPS5
KEGG koko:K02989,ko:K18914
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0000184,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006450,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009719,GO:0009725,GO:0009735,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030054,GO:0030312,GO:0030684,GO:0030686,GO:0031090,GO:0031503,GO:0031974,GO:0031981,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0050657,GO:0050658,GO:0050789,GO:0050896,GO:0051029,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0055044,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0070925,GO:0070972,GO:0071166,GO:0071426,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097064,GO:0097159,GO:0098588,GO:0098805,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1990904
EggNOG free text desc.rRNA binding
EggNOG OGsCOG0049@1,KOG3291@2759
EC1.18.1.6
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03029
Ec32 ortholog descriptionRibosomal protein S5/S7, eukaryotic/archaeal
Ec32 orthologEc-07_003740.1
Exons5
Model size931
Cds size693
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815306.3537676-UTR-L-elsbetiae_contig1089:8433..84561622815306.3537676-UTR-L-elsbetiae_contig1089:8433..8456Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1089 8434..8456 +
1691682828.89816-UTR-L-elsbetiae_contig1089:8433..84561691682828.89816-UTR-L-elsbetiae_contig1089:8433..8456Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1089 8434..8456 +
1622815306.4162705-UTR-L-elsbetiae_contig1089:13753..139681622815306.4162705-UTR-L-elsbetiae_contig1089:13753..13968Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1089 13754..13968 +
1691682828.970902-UTR-L-elsbetiae_contig1089:13753..139681691682828.970902-UTR-L-elsbetiae_contig1089:13753..13968Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1089 13754..13968 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815306.3642492-CDS-L-elsbetiae_contig1089:8456..86021622815306.3642492-CDS-L-elsbetiae_contig1089:8456..8602Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 8457..8602 +
1691682828.912471-CDS-L-elsbetiae_contig1089:8456..86021691682828.912471-CDS-L-elsbetiae_contig1089:8456..8602Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 8457..8602 +
1622815306.3737395-CDS-L-elsbetiae_contig1089:10644..107711622815306.3737395-CDS-L-elsbetiae_contig1089:10644..10771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 10645..10771 +
1691682828.9280062-CDS-L-elsbetiae_contig1089:10644..107711691682828.9280062-CDS-L-elsbetiae_contig1089:10644..10771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 10645..10771 +
1622815306.3830426-CDS-L-elsbetiae_contig1089:11197..113321622815306.3830426-CDS-L-elsbetiae_contig1089:11197..11332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 11198..11332 +
1691682828.9400058-CDS-L-elsbetiae_contig1089:11197..113321691682828.9400058-CDS-L-elsbetiae_contig1089:11197..11332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 11198..11332 +
1622815306.39226-CDS-L-elsbetiae_contig1089:12612..127291622815306.39226-CDS-L-elsbetiae_contig1089:12612..12729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 12613..12729 +
1691682828.9492784-CDS-L-elsbetiae_contig1089:12612..127291691682828.9492784-CDS-L-elsbetiae_contig1089:12612..12729Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 12613..12729 +
1622815306.401677-CDS-L-elsbetiae_contig1089:13585..137531622815306.401677-CDS-L-elsbetiae_contig1089:13585..13753Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 13586..13753 +
1691682828.9591613-CDS-L-elsbetiae_contig1089:13585..137531691682828.9591613-CDS-L-elsbetiae_contig1089:13585..13753Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1089 13586..13753 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1089.811.1prot_L-elsbetiae_contig1089.811.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1089 8457..13753 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1089.811.1

>prot_L-elsbetiae_contig1089.811.1 ID=prot_L-elsbetiae_contig1089.811.1|Name=mRNA_L-elsbetiae_contig1089.811.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
MATELNPDGWDGGEPVVADETAEEWGEPEEAPLAVEESGISDVQLFNKWT
FDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCC
ALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPRED
STRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLA
DEIINAARGSSNSYAIKKKDEIERVAKANR*
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mRNA from alignment at L-elsbetiae_contig1089:8434..13968+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1089.811.1 ID=mRNA_L-elsbetiae_contig1089.811.1|Name=mRNA_L-elsbetiae_contig1089.811.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5535bp|location=Sequence derived from alignment at L-elsbetiae_contig1089:8434..13968+ (Laminarionema elsbetiae ELsaHSoW15)
CTTCCCCACACGCAGGAACAAAGATGGCTACCGAACTGAACCCGGACGGA
TGGGATGGAGGAGAGCCCGTAGTGGCAGACGAGACTGCTGAAGAGTGGGG
CGAGCCCGAGGAGGCTCCTCTTGCCGTCGAGGAGTCTGGCATCTCTGATG
TGCAGCTCTTCAATAAGTGGTGAGGAGAGTGTAGCGGATTCAGGCGGCTG
TTGGGTTTGGGAGCGTTGATCGTGGATGTCGATGTCTCCCACCGTGGTAG
TGTTGCTTTGACGGTGCGTGTTGCATGTAAGCTCTTGCTGCACCTGTTCG
TTCCGTACCCGTGTGTTTGATGCCCTCCAAGCAAACCTTTTTGCACCTCT
CGTGTATCACACAAGCGGTGCGGAGACGCTCAGCACGAGGCTGTAGTGTG
GTTACATGTGCCGGGCTGAGAAGGCATATTACTTGTTCTCGAAGGTTATC
CGCGATGTATGGTGTTCGCAGCTGTCGTCGTCCTCAGCGTCGTGTGAAAT
CCTGTTGGGACAACCCCATCTATCTGTGTGCGTGATCCATCAGGCACCCC
CCCCTCCTCCCACCCACTACACTTGTGATTTATTGTTTGGCAACCGCTTC
CGTTGTTGCATCCTGCATATTCTATGGCCAACGGCTTCTATTTTCTTGTT
TTTCGTTGTGGAGCTTTGGCTATACTGTGGCCACCAGCGCGGGAGCACAC
TCTTGCCGTATTTCACGTCTTTCACGTGCTCGCTCTGTCTGTGTCTCTCA
GCTCCCCGCACAAAAGCATTGAGCGTCCCACAACAACAGTAGTCTCTGGT
TTCAAGCGGAGGTTGGTGTTCTGCCGGGCATTCCCGCGCAATCAGGTCAG
GCGTCTCGTCCGGCCCCGTAAACACGGGCTCTTTCTATCTGTGCAGCTGA
TGTATTCCCGTGCTCAATCCGAATTGTGTAGACAACCTTCACCTTTTCCA
CCATATACCATTTTCGTGTCCTGAGGTAATTCAGTGCGTCTAGTATGATG
GTGAACCCTGTTCGCGATGAAAGCATATTACACCATTTCCATACTACGTG
AAACTATCCCTTCAAGTAAACGATCTTGTCCTCAATTGTGCTCAAACAAT
AAATACATATGGTGCGCCTCGCCAGCTTTTCCCGCTTGAGCTAGATACAT
ATCTCCGTCGACCCTTGTGCTTTTTTTCCCTCTCTCGGCGCCCAAATACC
GAGCCTGTGCCCCCCGATGGCTGACCGCCGCAGTCAGTGTCTCCCAGCTG
ACTTTCCTCTAGCTGCTGCGGTGCAGAAGAGTGCGTGGCTCGAAACGGTC
CTTGTTCGATTGCGAACAGCGCGGCTCCAGCTGCTGTGATTTTGTTGGCC
GAAAAAGGAGACGGGTTTTTGAGCAAAACTCCCCCCGCATGCGGCACCGA
CCTCTTCCGCATGGGCCGCCCGCTGGTTTCGGTCAACCTTTTATTAAGAG
GCCCATGCGCTGCTGCAGTGCAGTGTACGGTGGCGCTGACCCTGTCGATC
GAAGAAATGAAATCCCTAGATGACGATGAAAGATTCAGAGCGAGAAATCT
TGCGTGTATTTTATGTATCAGATTACCACACTCTCCGCCGAAGTACTCGT
CTAGTTGTATCACGAGCCGGCGACCAAAGTGGCGAACGCCACTGCTGTTA
TTTGCAGCACGTGTTCGACTCATGCTTAACATTCTACGCACTAGAGGGTC
CTCTTTCATTTTCCGAGCGCATATGTATACACATGAAGAAACATGTACCT
GGTACGCCTTTTTTTATTAATGCTCCACAACACCCGACACGTTTATGTAT
CTATTTAGTGCATCACGCACCAAAACGTGAAGCACAACTGAAAAAGGTGG
ACGGGTAATATAGCACGCATCAAATACGAGACGAAAACACACACACACGC
ACTTGAGATGACGTCATGTCGGCTGTCTACTTGCGTCCGACCGGTTGAGA
AGTCGATCCAGGGGGACTGCTGTGTGAACACACCTACATAGCCTCCTTTT
TATTCTCGTTCGTCGCGTTTTATCGTGTCATACGTACATAGATATAGACG
GATCACTTGTGTCGCTGCACGAAGATGCTCTCTAACTTCCTCTCTCGGTT
TTCTTGCTGGCCTTGCTCCCGTGCTCGCTAGGCTCGCGTGTCGTGCCCTT
TCTTGCCTTTGTTCAAACACCCCGTGTCCTCTCCCGAATGCTTTTGCTGT
CTTGTGTGCAGGACCTTCGATGACATCGAGATCCGCGACATCTCCTTGGA
GGACTACATCGCCGTCAAGGGCAAGTACGCCACCTACCTCCCCCACACGG
CCGGCCGCTACCAGAAGAAGCGCTTCCGCAAGGCCACTGTGAGTGTGGGA
GAAGCGTGTTTTCGGTCCCGTCACACTTCAGGAAGCTATTTTTTGCGGCG
AGAGGGTGGTATAACTCGGCGAGTGGAAAGGAGTATAGACTCTTGACTGT
TTTTTTTTGCTGTGTGCGGATTGGTCGTCTGCGGAAGCAAGCGTCGTATT
GTGAGTTGATGTTCTTCCTGGCTCTAGACCTGCTTGGTATCTACACACGC
ACATCCGTGACTCGCTCCTTTAATTGCGTGTGAGGCAGGCAGCTTTAGTC
ATTTGTTGCCTACCCTTGTCCACCTCATGCCGCCCCTCCGCTGGTGGCAT
TAATTCATTAATTACCCTGCCCCCCTTTTCTTTTGTTCCCGACGGGGCCC
CTGCTGCTTCGTTACGGACTTGTTGGATCGTGCACGAAATCACGCTCGAA
CACGCACACAACAGTGCCCCATCGTGGAGCGCCTTTGCTGCGCCTTGATG
CGCAAGGGCCGCAACAGCGGTAAGAAGCTCATGGCGGCTCGCATCGTCAA
GCACACCCTGGAGATCATCCACCTCCTGACCGACCAGAACCCCGTGCAGG
TGTGTACTCACTTGTTGATATCAGTAAGGCCACCTCGAGCCATACTGTAT
GGGATAAAAAGAAAAAATCAACCCGAGTACCAGGCTGATGGATAACACAT
GTTACAACGTTTTGTATATACATCCGCGTGCATGTGGAAGTGTGAAAAGG
CTCAAACGTCTTGGGCACAAGATGGGAGGTTTATACCCCCCTTGTGAGGG
TGACCTTCACGTGTTGATGGACTGTGTGTGCGTGTTTGTTGGCGGCATTG
GCCCCAAAACGGGGTCATCGGAAAAAGTACCCCCAGTTGTCCGCAAGTTC
GAAAGAAGCGGCTGCGGGGAGGCAGGGAAGGGTCGCAGAGGATATGATGG
TTGAAGCATCCGGCTCTAGCGGGGCGCTCGGTATCGGGTGCGGAGGTAGA
GTCTTGCGCATCCCTGTCGGTCGCACACCTGTGCGATGCGAACGTGTCCT
TTTTCTCAAGGTGCAAGTCGGACGGTGTACTTGTTTCGCAGAGAGAGTGT
GTTTGTGTATGGTGTTGTTTGCACGCTCCTCCGCTGTTGTAGAAGCCGTG
AACCGGTCCAGGAAGTCGTGTTGGGATTTTTGCTTCTTTTCCCTTGTTGC
TTCTTCACATTAAAAACCGTTCCGATGGTGCATGCATCTAGAACCCTAGC
AACGAATTATTTAGGGTTCGAGGGGGGGCTCACGCACCCGTGCGCTGCCT
CACCACAAGACCCAAATTCCGCCCACGACATGGGCAACTTCGAGACCAAG
TTGTCGGTGACGTTTGCGTCCTGCTTTCAGTGCTAGTGCCGGGACAAACT
CTCGGCAGTGAAGTTAAGAGTGTCGGAGAGAGTTTCCGCAACGGCCGGCA
CATGTGGTCGAAACCTGCCGGATGATCAGTCGTCGCGTACTTGTGTTATT
CGACGGTTAGCTGTGCGCACACAATTATGCCGGCGGCTCACGACACGGTC
TCTTTGGATCGTCCTGTGGAAGATACACAAGACGGCTGTTGCCTCTTCGC
GGGGGCCCAACAGCGTATAATCGATTGGATCGATGTACCCCCCCCCCGCG
CTACAGCACAACACATTATTATCTCTGTGCGAGGCCCTCTACGTGTTGTC
ACGGCCGTCCTCTATTTATCTCACGAAAGTGCGAAACCGAGAAACTACCG
CAGTTGATTGAGTGACGAGTGAGAGATCTCCCCGTCGGCTGTTCCGCTCT
CTAGCTACCATGTCCTCTTGGCCGGCGAAATCACCCTTCCGCTCCTGTAT
GTCTGCACCACACCACACCACCACAACAGGTGCTCGTGGACGCGGTGATC
AACTCGGGCCCCCGGGAAGACTCCACCCGCGTGGGGTCCGCGGGTGTGGT
GCGGCGCCAGGCCGTCGACCTCTCGCCTTTCCGCCGCGTCAACCAGGTTC
GTGCTTTTGTGAATAGGAACTCCTAAGGAGATGAACGTTCTACACATGCA
CGTGCGGTACAGGCTCTGATGATGTTCTGTGTAGCGAAGCAAGCATCGGT
GCGGCACGCTCTTGGTGCGAGTGAAGGTGTCATCTGGTAAATGGTGGACG
CATGTACATGGCGTGCCTGCCTGCGCGGTTTTGTTGTGCGTCTTGTCGGC
GTTGATACTTGCTTGCCGACTGATGTGGGAATGATTTGTGGATTGCGAGA
TAGTCGAAAGGAATGGGCGCTGTTGTCAATCGTATTATCCTCCCAATTCG
ACGTGGTACGCGGCGTGTGTGTGTGTGTGTGCGTCCTATCAGCATCCGAG
TAAACTTTTCTGTTGTGGTTTGGATACAGCAGTAGTAGATTACGACCGTT
GGTTTGTACAAGGCAGTGGTAAAAAAGACGTTTCGTATCAGGTTTGTTGT
TGTTTTTCGCGGTCGTGGGAAAAAGCTCTTGCCGTTATCAAGCGCGTGTC
GTCAAGACGCATTGCCCTGATCCCGGCGTCGTGGTGGTATTCAGCTTGTC
ACCGCCGCGGTAGCGTTTTCTGTCGGCGACTGACTCTTCTCTGAGACCGT
TTTTAGGTCAATCTATGCCTGAGAGTCCGTGTGGCAGAGTGAAGCGTGTT
GCGAGCCGCGCCCTTAATTAAGAGGTACACATGCATGTTCTCATGAAATA
CCTCTCCTCTGATTGTTGCTGTTGACATGTGCAGGCGATATGTACGCAGT
ATGACACAACAGAGTTTTTTTATGTTATCTAAATGTCTCTGCTCGGGTGT
CGCGCGCTCTGCTGTCTTTTTTTGTTTGTTCTCGTCGCGGGCCGTCAATC
AGGCTCTGTACCTGATCACCACCGGCGCGCGCGAGTCGTCTTTCCGCAAC
ATCAAGACCATCGCCGAGTGCCTCGCCGACGAGATCATCAACGCCGCCCG
CGGGTCGTCCAACTCGTACGCCATCAAGAAGAAGGACGAGATCGAGCGCG
TGGCCAAGGCTAACCGGTAGACGCGCCGCTCGCCACCGGATAGTCTTCCT
CTTGGAAGAGATGTGCGCCAAGCGAGGCTTTGCTTGTTTGCCTTGTCTTT
TATCTCTCTCTGTGCGCCCTCGTGGGTGCCTGCTTTCATCGTCCATTACG
ATCGGTCTCCTCTCTTGTGAAGATGGGGGGTTGTATTTGGGGGTATAAGG
TGTTGTCTGCGGGGGTGTAGAGGCTGGTGGGCTCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1089:8434..13968+

>mRNA_L-elsbetiae_contig1089.811.1 ID=mRNA_L-elsbetiae_contig1089.811.1|Name=mRNA_L-elsbetiae_contig1089.811.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig1089:8434..13968+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTACCGAACTGAACCCGGACGGATGGGATGGAGGAGAGCCCGTAGT
GGCAGACGAGACTGCTGAAGAGTGGGGCGAGCCCGAGGAGGCTCCTCTTG
CCGTCGAGGAGTCTGGCATCTCTGATGTGCAGCTCTTCAATAAGTGATGG
CTACCGAACTGAACCCGGACGGATGGGATGGAGGAGAGCCCGTAGTGGCA
GACGAGACTGCTGAAGAGTGGGGCGAGCCCGAGGAGGCTCCTCTTGCCGT
CGAGGAGTCTGGCATCTCTGATGTGCAGCTCTTCAATAAGTGGACCTTCG
ATGACATCGAGATCCGCGACATCTCCTTGGAGGACTACATCGCCGTCAAG
GGCAAGTACGCCACCTACCTCCCCCACACGGCCGGCCGCTACCAGAAGAA
GCGCTTCCGCAAGGCCACTGACCTTCGATGACATCGAGATCCGCGACATC
TCCTTGGAGGACTACATCGCCGTCAAGGGCAAGTACGCCACCTACCTCCC
CCACACGGCCGGCCGCTACCAGAAGAAGCGCTTCCGCAAGGCCACTTGCC
CCATCGTGGAGCGCCTTTGCTGCGCCTTGATGCGCAAGGGCCGCAACAGC
GGTAAGAAGCTCATGGCGGCTCGCATCGTCAAGCACACCCTGGAGATCAT
CCACCTCCTGACCGACCAGAACCCCGTGCAGTGCCCCATCGTGGAGCGCC
TTTGCTGCGCCTTGATGCGCAAGGGCCGCAACAGCGGTAAGAAGCTCATG
GCGGCTCGCATCGTCAAGCACACCCTGGAGATCATCCACCTCCTGACCGA
CCAGAACCCCGTGCAGGTGCTCGTGGACGCGGTGATCAACTCGGGCCCCC
GGGAAGACTCCACCCGCGTGGGGTCCGCGGGTGTGGTGCGGCGCCAGGCC
GTCGACCTCTCGCCTTTCCGCCGCGTCAACCAGGTGCTCGTGGACGCGGT
GATCAACTCGGGCCCCCGGGAAGACTCCACCCGCGTGGGGTCCGCGGGTG
TGGTGCGGCGCCAGGCCGTCGACCTCTCGCCTTTCCGCCGCGTCAACCAG
GCTCTGTACCTGATCACCACCGGCGCGCGCGAGTCGTCTTTCCGCAACAT
CAAGACCATCGCCGAGTGCCTCGCCGACGAGATCATCAACGCCGCCCGCG
GGTCGTCCAACTCGTACGCCATCAAGAAGAAGGACGAGATCGAGCGCGTG
GCCAAGGCTAACCGGTAGGCTCTGTACCTGATCACCACCGGCGCGCGCGA
GTCGTCTTTCCGCAACATCAAGACCATCGCCGAGTGCCTCGCCGACGAGA
TCATCAACGCCGCCCGCGGGTCGTCCAACTCGTACGCCATCAAGAAGAAG
GACGAGATCGAGCGCGTGGCCAAGGCTAACCGGTAG
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