mRNA_L-elsbetiae_contig10847.780.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10847.780.1
Unique NamemRNA_L-elsbetiae_contig10847.780.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: D8LH72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH72_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 3.610e-142
Identity = 207/231 (89.61%), Postives = 218/231 (94.37%), Query Frame = 2
Query:  209 LPGHRQVPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIERRT 901
            L G   VPDDDRAQEIGYAASFM+LVGSDFSWEG+GQVMHYDTTIPT IGAVTAAAV IDVWKR+GCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDM+++FL+GNG+HRILVWLLAGVAGEGLVHRQMIASDPRQA+AFLQM RNR+ G  LDPEDD ERVQWAFNEARALLKDNE AFEALR+RLE GGATVGDCVSIIERRT
Sbjct:  145 LRGLVPVPDDDRAQEIGYAASFMVLVGSDFSWEGIGQVMHYDTTIPTVIGAVTAAAVGIDVWKRSGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMKETFLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAFAFLQMVRNREDGFELDPEDDSERVQWAFNEARALLKDNEGAFEALRRRLEGGGATVGDCVSIIERRT 375          
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A835Z355_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z355_9STRA)

HSP 1 Score: 247 bits (631), Expect = 2.260e-74
Identity = 124/230 (53.91%), Postives = 165/230 (71.74%), Query Frame = 2
Query:  230 PDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAAD-PDMEDSFLSGN--GIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDI-----GCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIER 895
            P DDR  ++ +A +F+ +VG DF+ +G+  V+ +D T+P  +   TA AVA+D+++     S+ VL G++RLF +DV RESRAEAGAFL  Y+TGLPCFAF+P+ +EALRM    P+++++F SG   G HR LVWLL+ VAGE L HRQ+I SDPRQA  FL +AR R +         D EDD   V+WAFNEAR LL+DNE  FEALR+RLE+GGATVG+CVS+I+R
Sbjct:  139 PSDDRGGDLMHAGAFLGVVGFDFAGDGLAPVLDFDATVPAILSLATAGAVALDIFQGGAERSRRVLAGLSRLFTRDVSRESRAEAGAFLAGYLTGLPCFAFKPNVLEALRMVEGMPELKEAFQSGGAGGAHRTLVWLLSAVAGEHLTHRQLIVSDPRQATTFLLLARERGLLPSCGDAAADAEDDEMAVRWAFNEARELLRDNEGMFEALRQRLETGGATVGECVSLIDR 368          
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A0G4G463_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G463_VITBC)

HSP 1 Score: 187 bits (476), Expect = 6.670e-51
Identity = 96/225 (42.67%), Postives = 144/225 (64.00%), Query Frame = 2
Query:  227 VPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMH--YDTTIPTAIGAVTAAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIER 895
            +P+D R++++  A++FM  VG+    E +G  ++  +D   PT      AAA   D+ K  G  SK V+ G+ RL + D ER+ R E+ AFL AY+ GLPCF F+P+ +EAL+MA DP +    L+  GI ++LVWLLAGVA E L H + I +DPRQ+ AF+++ R++D    +D E    RV+WAF++A  LL+ +    + LR+R+ES  ATVGDCV+ +E+
Sbjct:  195 MPEDSRSKDVVVASAFMGYVGTGVGAETLGDYIYGDFDEIYPTVALLALAAAGVYDIVKGGGVVSKSVVAGLKRLLVDDKERQCRVESAAFLVAYLLGLPCFCFRPNVLEALKMAEDPRIRMDLLTPAGIDKLLVWLLAGVAAENLQHPECIVADPRQSDAFVKLMRDKDYLKGVDDETASLRVKWAFHKATNLLRKHRRVHDELRRRMESKAATVGDCVTFLEK 419          
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A4D9D6H3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6H3_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.820e-45
Identity = 93/226 (41.15%), Postives = 137/226 (60.62%), Query Frame = 2
Query:  227 VPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVW---KRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAAD-PDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIE 892
            VP D R  E+    + + +VG   S E VG ++H DTT   A   V   A  + VW   +R G    + L G+NRLFL+D ER++  +A  FL+AY+ GLPCF F P+ +EA+RM A  P   ++  S  G++R+LV+LLA VA E   + Q++ASD RQA A LQ+   R      +  ++   + WA+ EA+ LL+ + +  E L++R+ESGGATVGDCV+++E
Sbjct:  148 VPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTT---AASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVYMGRGEARGQEGREEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 370          
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: W7U4H7_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4H7_9STRA)

HSP 1 Score: 171 bits (432), Expect = 6.980e-44
Identity = 93/226 (41.15%), Postives = 137/226 (60.62%), Query Frame = 2
Query:  227 VPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVW---KRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAAD-PDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIE 892
            VP D R  E+    + + +VG   S E VG ++H DTT   A   V   A  + VW   +R G    + L G+NRLFL+D ER++  +A  FL+AY+ GLPCF F P+ +EA+RM A  P   ++  S  G++R+LV+LLA VA E   + Q++ASD RQA A LQ+   R      +  ++   + WA+ EA+ LL+ + +  E L++R+ESGGATVGDCV+++E
Sbjct:  279 VPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTT---AASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVFMGRGEARGQEGREEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 501          
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A7S1XSQ6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSQ6_9STRA)

HSP 1 Score: 165 bits (418), Expect = 7.570e-44
Identity = 92/238 (38.66%), Postives = 143/238 (60.08%), Query Frame = 2
Query:  209 LPGHRQVPDDDRAQEIGYAASFMMLVGSDFSWEGV------GQVMHYDTTIPTAIGAVTAAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRM--AADPDMEDSF-LSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDI-GCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIE 892
            L G   +P DDR +E+  + +FM   G     E          ++H    +P A+ A++AAA  ID+W R G T   + +G++RLF KD ER++R E+ + +  Y+ GLPCFAF+PS  EAL +  A D  M+++   +   ++R+LVWLLA VAGE   + Q++ASDPRQA AFL + R R + G    P++  + V+WA+ EAR L++ NE   + + +R+E+   +VGDC +I +
Sbjct:   60 LEGLAPLPSDDRLKELWLSLAFMGYCGVGVGLEAAIPFTDDPNLLH-SGLLPDAMLALSAAAAGIDIWGRQGKTLLELRSGLSRLFYKDSERDARCESASLVVGYLLGLPCFAFRPSVQEALALLDAEDAAMQEALPRNAATVNRLLVWLLAPVAGEDTKYSQLLASDPRQAAAFLSLVRARGVDGAAYSPDEAGDMVKWAYGEARKLVRTNEVLIDRISERMETMQGSVGDCAAICD 296          
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A7S2H157_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H157_9STRA)

HSP 1 Score: 166 bits (421), Expect = 5.320e-43
Identity = 90/245 (36.73%), Postives = 142/245 (57.96%), Query Frame = 2
Query:  224 QVPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVTAAAVAIDVWKR------------------AGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNR--DIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIERR 898
            +VP D R  E+ +A SF+  + +   W  +  ++H +  +PT    V    +  D +                     G  ++++L G+NRLF +D+ RE R EA +FL AY+ GLP F+  P+ +EA+++     +++S ++  GI+RILVWLLA VA E   HRQ+I SDPR A A L++ R R  D+G   + EDD  RV+ A ++A  LL  + +  +ALR+R+ESG ATVG+CV ++E++
Sbjct:  182 EVPIDSRELEVTFALSFVAFISASVGWGSIAPILHQEPLVPTWATFVAVLLLLADNFNALVSISKDGNFQLATLPQIGGDGTRVLLAGLNRLFTRDLTRECRCEAASFLVAYVLGLPSFSLNPTTLEAIKLTDVEPIKESLMTDAGINRILVWLLASVAVENAQHRQLIVSDPRNAPALLRLLRERGVDVG---EEEDDALRVRHALSQADLLLTRHGATLDALRERMESGAATVGNCVGLLEKQ 423          
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A8J2WW41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WW41_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.720e-31
Identity = 85/225 (37.78%), Postives = 114/225 (50.67%), Query Frame = 2
Query:  224 QVPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPTAIGAVT-AAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMEDSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIER 895
            ++P DDRA E   A + +  VG     E    +   D   P     V  AAA   D +   G  +K    G++RL  +D  RE+  EA +F   Y  GLPCFAF P+AVEA   A    + D  +  N +  +LVWL A VA E   HR+++ASDPRQA AFL + R R  G   D   + +  +WA  +A  LL+    + E L    ESG AT GD V+ +ER
Sbjct:  144 ELPTDDRATETAAALAALACVGFPALAEVAASITGGDAPGPATFTLVADAAAFGADAYLLGGEIAKKAGAGVDRLLARDARREAECEAASFDLGYRLGLPCFAFSPTAVEAANAA----VVDGSVDENRVRALLVWLCAPVACERRKHRKLLASDPRQAVAFLTLLRGR--GQFTDVNSNEDNARWALGDAARLLESRTRSVEELADFFESGVATAGDVVARLER 362          
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: A0A7S2KXP3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXP3_9STRA)

HSP 1 Score: 126 bits (317), Expect = 7.650e-29
Identity = 91/296 (30.74%), Postives = 144/296 (48.65%), Query Frame = 2
Query:  158 RREMSEFVKHFVAVHACLPGHRQVPDDDRAQEIGYAASFMMLVGSDFSWEGVGQVMHYDTTIPT---AIGAVTAAAVAIDVWKRAGCTSKMV-------------------------LNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAA---------DPDME---------DSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNR----DIGCTLDPEDDPERVQWAFNEARALLK-DNESAFEALRKRLESGGATVGDCVSIIE 892
            +R+++++  +       L    ++P DDRA EI  A S + +  + F  + + ++       P     + A+ +  V  + +     T+ +V                         + G NRLF +D ER   AEA AFL AY  GLPCFAFQP+A+EA  +A          DP++          D  LS  G+ ++L+WL A VA E   H Q++ SDPR+A +FL   RN+    +IG ++  ++  + ++WA+ EA  L + DN    +AL + L SG +T+GD V IIE
Sbjct:   65 QRDLTQYPTNQPKKQQRLSNVPKIPTDDRASEISSALSVLSVAAACFLADPLAKLFGGTDAGPLPNLVLFAIISVGVLDNFYDVLSGTANLVDKAPKMPEKGNLPLGLGNGQLTSNFVAGFNRLFTEDTERACEAEAAAFLAAYSLGLPCFAFQPNALEAAILAIESSQQPATDDPNINYLPPNSTNLDPLLSNEGVIKLLIWLYAPVAYENSKHPQLLYSDPREAASFLDRIRNKLSSSNIGHSVAIDEADDLMKWAYAEADMLQRQDNGQKLQALSEGLASGASTLGDIVGIIE 360          
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Match: B7GB00_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GB00_PHATC)

HSP 1 Score: 125 bits (314), Expect = 1.320e-27
Identity = 70/177 (39.55%), Postives = 100/177 (56.50%), Query Frame = 2
Query:  401 AGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDME----DSFLSGNGIHRILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARN---------RDIGCTLDPEDDPERVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIE 892
            +G  +  V+ G  RL   D ERES  EA A LTAY TGLPCFA++P+A+EA  +  +        DS LS  GI R+LVWLLA VA E       I S+PR+A +FL               +I  T + ++  + ++WA+ EA  LL++N    + + +RL  G ATVGDC++++E
Sbjct:  320 SGQLTGSVVRGFARLLTTDAERESLCEASALLTAYCTGLPCFAYRPNALEASVLVVESTKNSNGMDSLLSSAGIMRVLVWLLAPVAAESAKFPVCIVSNPREAESFLDRLEEFAAKDPSLADEIFWTGNKQERKDLLKWAYTEADLLLRENRKILQEVTERLTGGAATVGDCIAVLE 496          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10847.780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LH72_ECTSI3.610e-14289.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z355_9STRA2.260e-7453.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4G463_VITBC6.670e-5142.67Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A4D9D6H3_9STRA4.820e-4541.15Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U4H7_9STRA6.980e-4441.15Uncharacterized protein n=3 Tax=Nannochloropsis ga... [more]
A0A7S1XSQ6_9STRA7.570e-4438.66Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2H157_9STRA5.320e-4336.73Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J2WW41_9STRA1.720e-3137.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2KXP3_9STRA7.650e-2930.74Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7GB00_PHATC1.320e-2739.55Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10847contigL-elsbetiae_contig10847:5..2562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score423.7
Seed ortholog evalue5.9e-116
Seed eggNOG ortholog2880.D8LH72
Hectar predicted targeting categoryother localisation
EggNOG OGs2DR9F@1,2S6DN@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_000800.1
Exons3
Model size1409
Cds size741
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10847.780.1prot_L-elsbetiae_contig10847.780.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10847 507..2396 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815302.7396533-UTR-L-elsbetiae_contig10847:4..5061622815302.7396533-UTR-L-elsbetiae_contig10847:4..506Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10847 5..506 -
1691682826.5362809-UTR-L-elsbetiae_contig10847:4..5061691682826.5362809-UTR-L-elsbetiae_contig10847:4..506Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10847 5..506 -
1622815302.7813919-UTR-L-elsbetiae_contig10847:2396..25621622815302.7813919-UTR-L-elsbetiae_contig10847:2396..2562Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10847 2397..2562 -
1691682826.600553-UTR-L-elsbetiae_contig10847:2396..25621691682826.600553-UTR-L-elsbetiae_contig10847:2396..2562Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10847 2397..2562 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815302.7495365-CDS-L-elsbetiae_contig10847:506..6871622815302.7495365-CDS-L-elsbetiae_contig10847:506..687Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10847 507..687 -
1691682826.5460088-CDS-L-elsbetiae_contig10847:506..6871691682826.5460088-CDS-L-elsbetiae_contig10847:506..687Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10847 507..687 -
1622815302.7589736-CDS-L-elsbetiae_contig10847:1671..18391622815302.7589736-CDS-L-elsbetiae_contig10847:1671..1839Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10847 1672..1839 -
1691682826.5567057-CDS-L-elsbetiae_contig10847:1671..18391691682826.5567057-CDS-L-elsbetiae_contig10847:1671..1839Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10847 1672..1839 -
1622815302.769931-CDS-L-elsbetiae_contig10847:2004..23961622815302.769931-CDS-L-elsbetiae_contig10847:2004..2396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10847 2005..2396 -
1691682826.5722327-CDS-L-elsbetiae_contig10847:2004..23961691682826.5722327-CDS-L-elsbetiae_contig10847:2004..2396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10847 2005..2396 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10847.780.1

>prot_L-elsbetiae_contig10847.780.1 ID=prot_L-elsbetiae_contig10847.780.1|Name=mRNA_L-elsbetiae_contig10847.780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp
MSEFVKHFVAVHACLPGHRQVPDDDRAQEIGYAASFMMLVGSDFSWEGVG
QVMHYDTTIPTAIGAVTAAAVAIDVWKRAGCTSKMVLNGMNRLFLKDVER
ESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMEDSFLSGNGIHR
ILVWLLAGVAGEGLVHRQMIASDPRQAYAFLQMARNRDIGCTLDPEDDPE
RVQWAFNEARALLKDNESAFEALRKRLESGGATVGDCVSIIERRTN*
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mRNA from alignment at L-elsbetiae_contig10847:5..2562-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10847.780.1 ID=mRNA_L-elsbetiae_contig10847.780.1|Name=mRNA_L-elsbetiae_contig10847.780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2558bp|location=Sequence derived from alignment at L-elsbetiae_contig10847:5..2562- (Laminarionema elsbetiae ELsaHSoW15)
ATTTGAAATATGACGGGTCGGGTCGGGTCGGGTCAGTGACCCGGGATGGA AAAATCTGACGGGTCGGGTCGGGTCAGCTGACCCGCACCTGACCCGTCAG GTTGACCCGACCCGTGTGAACATCCCTGTTTGTCACGAGTAGAACATACT CATAGTCCGCCGCGAAATGTCTGAGTTCGTGAAGCACTTTGTTGCGGTGC ATGCCTGCCTCCCTGGCCATCGACAGGTGCCCGACGATGACCGTGCCCAG GAAATTGGATATGCCGCATCCTTCATGATGCTGGTTGGCTCTGATTTCTC GTGGGAGGGAGTCGGCCAGGTCATGCACTATGACACCACCATCCCGACGG CCATCGGAGCGGTAACTGCCGCCGCCGTTGCCATCGACGTGTGGAAAAGA GCCGGTTGTACATCGAAGATGGTCCTCAACGGCATGAACAGGCTGTTTCT GAAGGACGTCGAGCGCGAGAGCCGAGCAGAGGCTGGAGCTTTCTTGACGG CATACATGACAGGCCTGCCCTGCTTCGCCTTTCAGCCCAGTGCGGTAGAG GCCCTCCGGTGTGTTTTTGAATGATGCTTCAGCTGGCGACTAGAGACGAC CATTCCGCCCCGTTCCGCTCCCTCCGCTCGTGTACTGTGTGTGTGTGTTA GTGTGCACTTTTCATCTTGATATGCATAACGAAGGCAACGCAAAACTCAA CCATGGCCTCGCTTATATCTCAGGATGGCTGCCGATCCCGACATGGAGGA TTCCTTTTTAAGTGGTAACGGCATCCACCGCATTTTGGTTTGGCTGCTGG CCGGAGTAGCTGGAGAAGGGCTGGTTCACCGACAAATGATTGCTAGCGAT CCTCGCCAGGCCTACGCTTTCCTGCAGATGGCCCGAAATAGGTGGGCACT GTCTGTGTGTCACGCTTATTGCGGTTTCCTGTCCGTTTATTTTTTTGCTT GTTGTCATGCAAGTACTGGTTGTGTGCGTTCTAGGATAACTCGTTGGCCA GATCCCTAAATATGTGTGTCACACCCTCTCACCCTACGAGTTTCGTGTAA CAGTTAAGGGTGTGTGGCCAACATTTTTTGGGGGATCCGTGAATCTTAAA ATGCTTGGGAGAGCACACATAACCACCCAGCAGATCCACCAGAGCAGTAG GGAAGCATTGCACACGAGGAATCGTGTTGGTTCGCTCATCGAGCGGAGAA CGGGGCAGCTTTTGTAAATGTATCACGTAAGATACCCGCCCCCCCCAACT CTGAAATCAATATATCTCCTCTTCAAAAATCAAGACAAAACAGACAATTT TTCGGGCGTTTATAAAAACGGCTGGGTTTGGTGAGCGCCTGTCGTGGAAG CTTGGATCTGTAGAGGACACCATGGAGGAGGTGTGAGGCGTGTTCGCATG CTTATATCTGCTGTTTGGGGACTAGTTACCGAGGGCCGCAGTACTAGCTC AAAAGTCCGCAAAAATGGGCCAAAACCAAACATCTTCCACTGGTGTGCTC GCCGTCTGCAGATTGCTGTCGTCGGCCCAGATTGCGGAGTTGGAGCCACT GCTGCGGTGCTCGATATCTAGTCCCCAGCAGCAGATATAAGCATGCGAAC ACGCCTCACACCTCCTCCTTGGTGTCCTTTACTGTGGTTATCCTTTACTG ATTGAAGCGTCCAAGACAGGATTTACGACAACCCAAACCTCACTAGAAGT TAAGCGGTTTAGGGTTTTTCGACTTGAAAGATGACTAGCGGGGGGACCGA ATCTGGTATTTTCGGGGGGGTTTCGGACCCCTGTTGGCCGCAACCCCTTA ATATACCCAATTGAGTCCCGTTTAGGTTTTCGCATCTGACGTTGGTGCCA TCCTCCCCTTCGTCTGTGCGCAAAGGGACATTGGATGCACGCTTGATCCT GAAGACGACCCCGAACGCGTTCAGTGGGCATTTAACGAGGCCAGAGCCTT ACTCAAGGACAACGAGAGCGCGTTTGAGGCTTTGCGAAAAAGACTGGAAA GTGGCGGAGCAACGGTTGGGGACTGTGTGTCCATTATCGAGAGACGGACA AATTAATCTTGAGGTCTCCACAGACAGCAGTATTCGGTATTTTTGTATCC CCATTGATATTTAGACAGGAGACAAGGCGTGAAGCGTTGTATATAAACGT CGTGGTTCTCTTCCTAACTGTTGTGGCCAAACGGGTTGTGAATAATAATC CGGTGTTACAGATAGCAGTTGTAGGGGATTTATTTGGTGGTTGTCTACAA CCAGACAAAAACAAACTGGGAACTATCTGTCTGTAGAGCTGACATTTGTA ATCAAGGTTGTGTTTGGTACAGTACAGTACGTTTAGTACAGTATTGATTG TAGTACTAAACGTACTCTTTAGTATAGTATCAGGAGTTGTACTGAACCTG CAGTATAGTACAGTACGGAGAGGTGTACTCAAGCATACTATTGGGGTAGT ACAGTATCGAGAGCTGTACTAAACCCAAAAGTATAGTACAGTATTTTCAA CAGTACTGTACTAAGCCGAGTATAGTACCGATCCAAACCCGATACTAAAC CCGGAGTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10847:5..2562-

>mRNA_L-elsbetiae_contig10847.780.1 ID=mRNA_L-elsbetiae_contig10847.780.1|Name=mRNA_L-elsbetiae_contig10847.780.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig10847:5..2562- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTGAGTTCGTGAAGCACTTTGTTGCGGTGCATGCCTGCCTCCCTGG
CCATCGACAGGTGCCCGACGATGACCGTGCCCAGGAAATTGGATATGCCG
CATCCTTCATGATGCTGGTTGGCTCTGATTTCTCGTGGGAGGGAGTCGGC
CAGGTCATGCACTATGACACCACCATCCCGACGGCCATCGGAGCGGTAAC
TGCCGCCGCCGTTGCCATCGACGTGTGGAAAAGAGCCGGTTGTACATCGA
AGATGGTCCTCAACGGCATGAACAGGCTGTTTCTGAAGGACGTCGAGCGC
GAGAGCCGAGCAGAGGCTGGAGCTTTCTTGACGGCATACATGACAGGCCT
GCCCTGCTTCGCCTTTCAGCCCAGTGCGGTAGAGGCCCTCCGATGTCTGA
GTTCGTGAAGCACTTTGTTGCGGTGCATGCCTGCCTCCCTGGCCATCGAC
AGGTGCCCGACGATGACCGTGCCCAGGAAATTGGATATGCCGCATCCTTC
ATGATGCTGGTTGGCTCTGATTTCTCGTGGGAGGGAGTCGGCCAGGTCAT
GCACTATGACACCACCATCCCGACGGCCATCGGAGCGGTAACTGCCGCCG
CCGTTGCCATCGACGTGTGGAAAAGAGCCGGTTGTACATCGAAGATGGTC
CTCAACGGCATGAACAGGCTGTTTCTGAAGGACGTCGAGCGCGAGAGCCG
AGCAGAGGCTGGAGCTTTCTTGACGGCATACATGACAGGCCTGCCCTGCT
TCGCCTTTCAGCCCAGTGCGGTAGAGGCCCTCCGGATGGCTGCCGATCCC
GACATGGAGGATTCCTTTTTAAGTGGTAACGGCATCCACCGCATTTTGGT
TTGGCTGCTGGCCGGAGTAGCTGGAGAAGGGCTGGTTCACCGACAAATGA
TTGCTAGCGATCCTCGCCAGGCCTACGCTTTCCTGCAGATGGCCCGAAAT
AGGATGGCTGCCGATCCCGACATGGAGGATTCCTTTTTAAGTGGTAACGG
CATCCACCGCATTTTGGTTTGGCTGCTGGCCGGAGTAGCTGGAGAAGGGC
TGGTTCACCGACAAATGATTGCTAGCGATCCTCGCCAGGCCTACGCTTTC
CTGCAGATGGCCCGAAATAGGGACATTGGATGCACGCTTGATCCTGAAGA
CGACCCCGAACGCGTTCAGTGGGCATTTAACGAGGCCAGAGCCTTACTCA
AGGACAACGAGAGCGCGTTTGAGGCTTTGCGAAAAAGACTGGAAAGTGGC
GGAGCAACGGTTGGGGACTGTGTGTCCATTATCGAGAGACGGACAAATTA
AGGACATTGGATGCACGCTTGATCCTGAAGACGACCCCGAACGCGTTCAG
TGGGCATTTAACGAGGCCAGAGCCTTACTCAAGGACAACGAGAGCGCGTT
TGAGGCTTTGCGAAAAAGACTGGAAAGTGGCGGAGCAACGGTTGGGGACT
GTGTGTCCATTATCGAGAGACGGACAAATTAA
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