mRNA_L-elsbetiae_contig10671.633.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: D7FKU0_ECTSI (Putative serine rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU0_ECTSI) HSP 1 Score: 314 bits (805), Expect = 2.010e-100 Identity = 143/202 (70.79%), Postives = 166/202 (82.18%), Query Frame = 1 Query: 1 PMEMEPTECRGKRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKVAQAASGVEYIPMIWGEKDMEADRLLHLEALGESSHLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNREDPILWLDEFFGKCGGAKNCRVTAIAVHSFTCEVCKQLLSCWLNKILHGYLKYGLPLWLTEFACAD 606 P+ EPTEC GKRGV+FDFKDA+DLDALAPGM+W YNWSP IIA +VK+AQ++SG EYIPMIWGEKD+++ RL +L +LG+SSH+LGFNEPNFG Q NLTP EAA +W TVK EA LGA+IVSPAVNFCGGDC +EDP WLD+FF C G C VTAIAVH +TCEV +LNKILHGYLKYGLP+W+TEFACAD Sbjct: 121 PVATEPTECHGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRLANLASLGQSSHMLGFNEPNFGSQANLTPQEAAALWSTVKSEAATLGAEIVSPAVNFCGGDCTKEDPYEWLDDFFSACEG---CDVTAIAVHIYTCEV------RYLNKILHGYLKYGLPIWITEFACAD 313
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: A0A6H5KQ88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ88_9PHAE) HSP 1 Score: 233 bits (595), Expect = 1.190e-70 Identity = 109/206 (52.91%), Postives = 146/206 (70.87%), Query Frame = 1 Query: 1 PMEMEPTECRGKRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKVAQAASGVEYIPMIWGEKDMEADRLLHLEALGESS-HLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNREDPILWLDEFFGKCGGAKN----CRVTAIAVHSFTCEVCKQLLSCWLNKILHGYL-KYGLPLWLTEFAC 600 P+E+ PT+C KRGVAF FK+++DL L G++W Y+WSPG +A+ + A G Y+PMIWGE D+ +RL L +G++S +LLGFNEPN+G Q NLTP EAA++WP V+ +A LG ++VSPAVNFC G+C EDPI WLD+FF CGG C +T IA+HS+TC+V +LNK +H Y+ +YGLP+WLTEFAC Sbjct: 53 PVELVPTQCSSKRGVAFGFKESDDLYTLKKGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPIKWLDDFFEACGGDVEGRDFCGITYIAIHSYTCKV------KYLNKHIHMYVQRYGLPIWLTEFAC 252
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: D8LG92_ECTSI (F5/8 type C domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG92_ECTSI) HSP 1 Score: 236 bits (602), Expect = 2.400e-69 Identity = 111/206 (53.88%), Postives = 145/206 (70.39%), Query Frame = 1 Query: 1 PMEMEPTECRGKRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKVAQAASGVEYIPMIWGEKDMEADRLLHLEALGESS-HLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNREDPILWLDEFFGKCGGAKN----CRVTAIAVHSFTCEVCKQLLSCWLNKILHGYL-KYGLPLWLTEFAC 600 P+E+ PT+C KRGVAF FK++ DL L G++W Y+WSPG +A+ + A G Y+PMIWGE D+ +RL L +G++S +LLGFNEPN+G Q NLTP EAA++WP V+ +A LG ++VSPAVNFC G+C EDPI WLDEFF CGG C +T IA+HS+TCEV +LNK +H Y+ +YGLP+WLTEFAC Sbjct: 90 PVELVPTQCSSKRGVAFGFKESGDLYTLKTGISWWYDWSPGSLADGILEASLTQGSLYVPMIWGEGDLTEERLRDLAWVGDTSPYLLGFNEPNYGEQANLTPQEAADLWPQVRQQADDLGMELVSPAVNFCYGNCVEEDPITWLDEFFEACGGDVEDRDFCGITHIAIHSYTCEV------KYLNKHIHMYVQRYGLPIWLTEFAC 289
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: A0A4U1JHY0_9DELT (Glyco_hydro_cc domain-containing protein n=2 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1JHY0_9DELT) HSP 1 Score: 179 bits (455), Expect = 1.650e-52 Identity = 94/197 (47.72%), Postives = 115/197 (58.38%), Query Frame = 1 Query: 16 PTECRGKRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKVAQAASGVEYIPMIWGEKDMEADRLLHLEALGESSHLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNREDPILWLDEFFGKCGGAKNCRVTAIAVHSFTCEVCKQLLSCWLNKILHGYLKYGLPLWLTEFACAD 606 P C KRGVA+ + DL AL+ G+ W YNW+ DV A A GVEY+PM WGE + L E ++ HLLGFNEPNFG Q NLTP +AA +WP ++D A IVSPAVNFCGG CN DP WLD+FF C G C V AIA+H + C+ L+ +L + KY LWLTEF+C D Sbjct: 58 PAAC--KRGVAYGYHSVADLTALSKGIGWWYNWATKPDNTDVADAHAGLGVEYVPMAWGEASLVG---LSAEVPADARHLLGFNEPNFGSQANLTPTQAAALWPQIEDFAEQHDLVIVSPAVNFCGGTCNVADPFEWLDQFFAACQG---CTVDAIAMHWYACD--GSALTWYLQQFES---KYTQKLWLTEFSCLD 241
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: UPI001CCFE65D (glycoside hydrolase family protein n=1 Tax=Nannocystis pusilla TaxID=889268 RepID=UPI001CCFE65D) HSP 1 Score: 172 bits (437), Expect = 1.230e-49 Identity = 88/200 (44.00%), Postives = 120/200 (60.00%), Query Frame = 1 Query: 13 EPTECRGKRGVAFDFKDANDLDALAPGMAWMYNWS--PGIIAEDVKVAQAASGVEYIPMIWGEKDMEADRLLHLEALGESSHLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNREDPILWLDEFFGKCGGAKNCRVTAIAVHSFTCEVCKQLLSCWLNKILHGYLKYGLPLWLTEFACAD 606 +P KRGVA+ + A DL ALAP ++W YNW+ P E V+ + GVE++PM+WG +E + E + +LL FNEPNFG Q NLTP EAA +WP V+ A G +IVSPA+N+CGG CN+ +P W DEFF C G CRV +AVH + C + LS ++ ++ +Y P+WLTEF+C D Sbjct: 74 DPPASSCKRGVAYGYHSAADLSALAPAVSWWYNWTVPPD---EGVRDSYQEIGVEFVPMLWGAASLEQMQ----EIPAGARYLLAFNEPNFGSQANLTPQEAAALWPQVEAVADAHGLEIVSPALNYCGGSCNKTNPFEWFDEFFAACQG---CRVDHLAVHWYACH--RDALSGYIEQMK----QYERPIWLTEFSCLD 257
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: A0A0K1E7A5_CHOCO (Glyco_hydro_cc domain-containing protein n=1 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1E7A5_CHOCO) HSP 1 Score: 171 bits (432), Expect = 7.090e-49 Identity = 91/205 (44.39%), Postives = 122/205 (59.51%), Query Frame = 1 Query: 1 PMEMEPTECRGKRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKV-AQAASGVEYIPMIWGEKDMEADRLLHL--EALGESSHLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNREDPILWLDEFFGKCGGAKNCRVTAIAVHSFT-CEVCKQLLSCWLNKILHGY-LKYGLPLWLTEFAC 600 P +PT C KRGVA+ + D+ AL+P ++W YNW+ + E V+ A GVEY+PM+WG ++A R + E G LLGFNEPNFG Q NL+ +EAA +WP V+ A G ++VSPAVN+CGG C DP +LD+FF C G CRV AI VH +T C+ + WL + Y ++ P+WLTEFAC Sbjct: 59 PPSSQPTGC--KRGVAYGYHSQADMLALSPAVSWWYNWTH-VPDEGVRPDAYTTIGVEYVPMVWGGGGLDAARATQIADEMPGGVRFLLGFNEPNFGEQANLSASEAAALWPHVEAIASARGLELVSPAVNYCGGSCQETDPFTYLDDFFAACAG---CRVDAIGVHIYTACQGDGTNKARWLIDQIERYKARFDQPIWLTEFAC 257
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: A0A1I2ARD7_9DELT (Glycosyl hydrolase catalytic core n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I2ARD7_9DELT) HSP 1 Score: 170 bits (431), Expect = 9.750e-49 Identity = 86/192 (44.79%), Postives = 117/192 (60.94%), Query Frame = 1 Query: 34 KRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKVAQ-AASGVEYIPMIWGEKDMEADRLLHLEALGESSHLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNREDPILWLDEFFGKCGGAKNCRVTAIAVHSFTCEVCKQLLSCWLNKILHGYLKYGLPLWLTEFACAD 606 KRG+A+ + DL ALAPG++W YNW+ + D V A VE++PM+WG ++ D + A +LL FNEPNFG Q +LTP EAA +WP V+ A G +IVSPA+N+CGGDCN+ DP W DEFF C G CRV +AVH + C + L+ ++ ++ KY P+WLTEF+C D Sbjct: 82 KRGIAYGYHSHADLAALAPGVSWWYNWA---VPPDPDVGDYQALNVEFVPMLWGGGSLDQDPPIPEGA----RYLLAFNEPNFGAQADLTPQEAAALWPQVEAVADAHGLEIVSPALNYCGGDCNKTDPFEWFDEFFAACPG---CRVDHLAVHWYACT--RDALTWYIGEMK----KYERPIWLTEFSCLD 257
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: A0A017T4U7_9DELT (Putative secreted protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017T4U7_9DELT) HSP 1 Score: 164 bits (416), Expect = 2.730e-46 Identity = 88/205 (42.93%), Postives = 118/205 (57.56%), Query Frame = 1 Query: 1 PMEMEPTECRGKRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKV-AQAASGVEYIPMIWGEKDMEADRLLHL--EALGESSHLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNREDPILWLDEFFGKCGGAKNCRVTAIAVHSFT-CEVCKQLLSCWLNKILHGY-LKYGLPLWLTEFAC 600 P PT C KRGVA+ + D+ AL+PG++W YNW+ + E V+ A GV+Y+PM+WG ++ R + E LLGFNEPNFG Q NL+ AEAA +WP V+ A G +VSPAVN+CGG C DP +LD+FF C G CRV + VH +T C+ + WL + Y ++ P+WLTEFAC Sbjct: 77 PPSSHPTGC--KRGVAYGYHSTADMQALSPGVSWWYNWTH-VPDEGVRPDAYETLGVDYVPMVWGGDGLDGARAAQIADEIPDGVRFLLGFNEPNFGAQANLSAAEAAALWPHVEAIADARGLALVSPAVNYCGGACQETDPFTYLDDFFAACEG---CRVDYLGVHIYTACQGDGTNKAQWLINQIETYKTRFDKPIWLTEFAC 275
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: A0A4U1JJB9_9DELT (Glyco_hydro_cc domain-containing protein n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1JJB9_9DELT) HSP 1 Score: 162 bits (410), Expect = 7.890e-46 Identity = 88/205 (42.93%), Postives = 119/205 (58.05%), Query Frame = 1 Query: 1 PMEMEPTECRGKRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKV-AQAASGVEYIPMIWGEKDMEADRLLHL--EALGESSHLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNREDPILWLDEFFGKCGGAKNCRVTAIAVHSFT-CEVCKQLLSCWLNKILHGY-LKYGLPLWLTEFAC 600 P T C KRGVA+ + D+ AL+P ++W YNW+ + E VK GVEY+PM+WG ++++R + E + LLGFNEPNFG Q N++ AEAA +WP V+ A G +VSPAVNFCGG C DP +LD+FF C G CRV +I +H +T C+ + WL + Y ++ PLWLTEFAC Sbjct: 37 PPITHSTGC--KRGVAYGYHSKADMAALSPAVSWWYNWAH-VPDEGVKPDVYKTLGVEYVPMVWGGGGLDSNRAAEIAAEIPDGVNFLLGFNEPNFGEQANMSAAEAAALWPHVEAVADARGLALVSPAVNFCGGSCQETDPFKYLDDFFAACEG---CRVDSIGIHIYTACQGDGTNKARWLINHIETYKTRFDKPLWLTEFAC 235
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Match: UPI001AEBE0E4 (glycoside hydrolase family protein n=1 Tax=Hymenobacter fodinae TaxID=2510796 RepID=UPI001AEBE0E4) HSP 1 Score: 159 bits (403), Expect = 2.720e-45 Identity = 90/213 (42.25%), Postives = 119/213 (55.87%), Query Frame = 1 Query: 1 PMEMEPTECRGKRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKVAQAASGVEYIPMIWGEKDME-----ADRLLHLEALGESSHLLGFNEPNFGGQGNLTPAEAAEIWPTVKDEAGVLGADIVSPAVNFCGGDCNRED------PILWLDEFFGKCGGAKNCRVTAIAVHSFTCEVCKQLLSCWLNKILHGYLKYGLPLWLTEFACAD 606 P + KRG+A+ + A DL ALAPG++W YNW A V GV+Y+PM WG +D++ ADRL G + +LLGFNEPNF Q NLTP +AA +WPT+++ A +VSPAVN+CG DC E+ P +LD FF C +C+V IAVH++ CE WL + KYG P+WLTEF+C D Sbjct: 27 PSQASAQTKSAKRGIAYGYHSAADLQALAPGISWWYNWYSKPEAGAASV-YTGLGVDYVPMQWG-RDLDGAPFTADRLAANIQAG-AKYLLGFNEPNFRSQANLTPTQAAALWPTLQEVARRKNLKLVSPAVNYCG-DCVSENGTTYYSPTQYLDAFFAAC---PSCQVDYIAVHTYVCE------EQWLRDKIGELKKYGKPIWLTEFSCGD 226 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10671.633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10671.633.1 >prot_L-elsbetiae_contig10671.633.1 ID=prot_L-elsbetiae_contig10671.633.1|Name=mRNA_L-elsbetiae_contig10671.633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=201bp MEMEPTECRGKRGVAFDFKDANDLDALAPGMAWMYNWSPGIIAEDVKVAQback to top mRNA from alignment at L-elsbetiae_contig10671:3001..5008- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10671.633.1 ID=mRNA_L-elsbetiae_contig10671.633.1|Name=mRNA_L-elsbetiae_contig10671.633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2008bp|location=Sequence derived from alignment at L-elsbetiae_contig10671:3001..5008- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10671:3001..5008- >mRNA_L-elsbetiae_contig10671.633.1 ID=mRNA_L-elsbetiae_contig10671.633.1|Name=mRNA_L-elsbetiae_contig10671.633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1206bp|location=Sequence derived from alignment at L-elsbetiae_contig10671:3001..5008- (Laminarionema elsbetiae ELsaHSoW15)back to top |