mRNA_L-elsbetiae_contig10662.627.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: A0A6H5KLG4_9PHAE (Rieske domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLG4_9PHAE) HSP 1 Score: 298 bits (763), Expect = 3.640e-93 Identity = 146/178 (82.02%), Postives = 155/178 (87.08%), Query Frame = 1 Query: 4 RVPNLWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVANDRLVCPYHGFEFESSGRLAHMPGAGPPKXXXXXXXXXXXXXXPAAAN-AKACGGRKAPTYPVKEIGGWIYIFPDETRPGSVEQHLDPVVIPEAVSPEFRVVEGSMDFKGGVDASVEN 534 RVPNLWLAVAHSS V+AGEVKKVEVDGVPIALWRT+ G+VSAQSDVCIHRGASLARGW+ANDRLVCPYHGFEFES+GRLAHMPGAG PK AA+ AKACGGRKAPTYPVKE GWIYIFPDETRPGSVEQHLDPVVIPEAVSP+FR ++GSMDFKGGVDASVEN Sbjct: 239 RVPNLWLAVAHSSDVKAGEVKKVEVDGVPIALWRTSTGSVSAQSDVCIHRGASLARGWIANDRLVCPYHGFEFESNGRLAHMPGAGRPKGSAAVARAAGRPATADAADKAKACGGRKAPTYPVKESAGWIYIFPDETRPGSVEQHLDPVVIPEAVSPQFRCIQGSMDFKGGVDASVEN 416
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: A0A836CFS0_9STRA (Rieske domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFS0_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.670e-49 Identity = 89/178 (50.00%), Postives = 110/178 (61.80%), Query Frame = 1 Query: 7 VPNLWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVANDRLVCPYHGFEFESSGRLAHMPGAGPPKXXXXXXXXXXXXXXPAAANAKACGG--RKAPTYPVKEIGGWIYIFPDETRPGSVEQHLDPVVIPEAVSPEFRVVEGSMDFKGGVDASVEN 534 VPNLWLAV H SS++ +V KV VDG PIA+WRT+ G + A SD+CIHRGASLA+GW+ DRLVCPYHGFEF+ G L +MPG + C G RK Y V+E GWIY+FPD RPG++EQ+ +P I EA P FR VEGS++ G A +EN Sbjct: 153 VPNLWLAVGHMSSLKGKKVLKVTVDGKPIAIWRTSTGELKAISDICIHRGASLAKGWLHQDRLVCPYHGFEFDGHGTLQYMPGV-----------------TKEGVTKQGCSGSGRKTQAYLVREKNGWIYLFPDAARPGAIEQYSEPFTIAEASDPRFRYVEGSVEIGGDAAACMEN 313
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: A0A4D9DEC4_9STRA (Rieske domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEC4_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.530e-38 Identity = 76/177 (42.94%), Postives = 103/177 (58.19%), Query Frame = 1 Query: 4 RVPNLWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVANDRLVCPYHGFEFESSGRLAHMPGAGPPKXXXXXXXXXXXXXXPAAANAKACGGRKAPTYPVKEIGGWIYIFPDETRPGSVEQHLDPVVIPEAVSPEFRVVEGSMDFKGGVDASVEN 534 +VPN WLAV HSSS++ E+KK+ VD PI L+R A G V A SD+C+HR A+L+ GW+ D +VCPYH ++F+ G+L ++PG A N + + Y E GG IY+FPD R G++EQH+ P +IPE V P FRVVEG + K + VEN Sbjct: 264 KVPNTWLAVCHSSSLKKKELKKIWVDDKPICLFRAASGEVKAISDICLHRAAALSDGWLDGDLVVCPYHAYKFDGEGKLRYIPGV---------------DEGMLAKNKRTA---RTVWYKTLEQGGLIYLFPDAMRAGAIEQHVKPFLIPEEVDPSFRVVEGVTEIKASANLVVEN 422
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: A0A6U4DAF0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DAF0_9STRA) HSP 1 Score: 135 bits (340), Expect = 8.160e-34 Identity = 74/180 (41.11%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 16 LWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVANDRLV-CPYHGFEFESSGRLAHMPGA-GPPKXXXXXXXXXXXXXXPAAANAKACGGRKAPTYPVKEIGGWIYIFPDETRPGSVEQH-----LDPVVIPEAVSPEFRVVEGSMDFKGGVDASVEN 534 +WL VAHS+ V + K +E+DG+PI +WR G +SA SDVCIHRGASLA+GWV+ V CPYHGFE+E G L G + P +YPV+E GGWI +FP T + H L+P+ PE +P FR ++GS+D G VDA++EN Sbjct: 238 VWLTVAHSADVPKMKTKLIEIDGIPIVVWRDQSGRLSALSDVCIHRGASLAKGWVSKSGCVACPYHGFEYEHDGALVRTANVMGRDEHETEQEAIDRIGRIPGDPPQTV-------SYPVREAGGWIQVFPRSTVEAFGQLHAPETVLEPLHYPELSTPGFRAIQGSVDINGSVDATMEN 410
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: D8LGX3_ECTSI (Rieske (2Fe-2S) domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGX3_ECTSI) HSP 1 Score: 132 bits (332), Expect = 1.150e-32 Identity = 61/67 (91.04%), Postives = 65/67 (97.01%), Query Frame = 1 Query: 4 RVPNLWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVANDRLVCP 204 RVPNLWLAVAHSS V+AGEVKKVEVDGVPIALWRT+ G+VSAQSDVCIHRGASLARGW+ANDRLVCP Sbjct: 173 RVPNLWLAVAHSSDVKAGEVKKVEVDGVPIALWRTSTGSVSAQSDVCIHRGASLARGWIANDRLVCP 239
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: A0A7R9YDM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDM5_9STRA) HSP 1 Score: 115 bits (288), Expect = 7.700e-28 Identity = 66/153 (43.14%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 16 LWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVA-NDRLVCPYHGFEFESSGRLAHMPGAGPPKXXXXXXXXXXXXXXPAAANAKACGGRKAPTYPVKEIGGWIYIFPDETRPGSVEQH-----LDPVVIP 456 LW++VAHSSSV KKV V +PI LWR A +SA SDVCIHRGASLA+GWVA N + CPYHGFEF+S G L PG P + YPV+E GWI +FP + H LDP+ P Sbjct: 187 LWMSVAHSSSVPRMTAKKVTVGDIPIVLWRDASDRLSALSDVCIHRGASLAKGWVAENGCITCPYHGFEFQSDGALLRTPGVVGATEDGEGSPTSSKTQPPTTIS-----------YPVRESDGWIQVFPRSSTEAFANLHVPEMVLDPLAYP 328
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: A0A7V6CC77_9GAMM (Aromatic ring-hydroxylating dioxygenase subunit alpha (Fragment) n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7V6CC77_9GAMM) HSP 1 Score: 90.1 bits (222), Expect = 4.430e-20 Identity = 47/139 (33.81%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 13 NLWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVANDRLVCPYHGFEFESSGRLAHMPGAGPPKXXXXXXXXXXXXXXPAAANAKACGGRKAPTYPVKEIGGWIYIF----PDETRP 417 N W +A ++ V + +VE+ G+P ++R G +D C+HRG SL+ GWV R VCPYHG+EF+ SGR H+P + A+ K K +YPV+E G ++ F P+E RP Sbjct: 4 NFWYPIARATDVTDSKPIRVELLGLPFVVFRDEQGDAHVLADTCVHRGGSLSAGWVRGGRAVCPYHGWEFDGSGRCVHIP---------------------SLADQKPPARAKVDSYPVQEKYGIVFAFLGDLPEEQRP 121
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: A0A7C4GWJ4_9CREN (Aromatic ring-hydroxylating dioxygenase subunit alpha n=2 Tax=Acidilobales archaeon TaxID=2268176 RepID=A0A7C4GWJ4_9CREN) HSP 1 Score: 92.4 bits (228), Expect = 3.500e-19 Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 13 NLWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVANDRLVCPYHGFEFESSGRLAHMP 252 N W VA SS + G + + V G + +WR+ GAV A D+CIHRGA L+ GWV++D+LVCPYHG+E+++SGR +P Sbjct: 9 NDWFVVARSSDLPVGGILRARVLGEDLVVWRSRSGAVMAWQDLCIHRGARLSLGWVSDDKLVCPYHGWEYDTSGRCVRIP 88
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: A0A2R4ZML2_9CREN (Ring-hydroxylating dioxygenase n=1 Tax=Desulfurococcaceae archaeon AG1 TaxID=2027460 RepID=A0A2R4ZML2_9CREN) HSP 1 Score: 90.1 bits (222), Expect = 2.490e-18 Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 1 Query: 13 NLWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVANDRLVCPYHGFEFESSGRLAHMP 252 N W VA SS + G V + + G I LWR++ G++ A D+CIHRGA L+ GWV+NDRLVCPYHG+E++ +G +P Sbjct: 8 NDWHVVARSSDLPVGRVLRARLLGEDIVLWRSSSGSIMAWQDLCIHRGARLSLGWVSNDRLVCPYHGWEYDVNGVCVRIP 87
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Match: A0A1Z4R413_9CYAN (Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Calothrix sp. NIES-4101 TaxID=2005461 RepID=A0A1Z4R413_9CYAN) HSP 1 Score: 88.2 bits (217), Expect = 1.330e-17 Identity = 60/176 (34.09%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 19 WLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHRGASLARGWVANDRLVCPYHGFEFESSGRLAHMPG---AGPPKXXXXXXXXXXXXXXPAAANAKACGGRKAPTYPVKEIGGWIYIFPDETRPGSVEQHLDPVVIPEAVSPEF-RVVEGSMDFKGGVDASVEN 534 W VA S + G++ KV + G + LWR A D C HRGASLARGWV ND LVCPYHG F G+ +H+P A PPK +KAC TY ++E G I++ G+ EQ + P PE +P + + G ++ ++EN Sbjct: 11 WHVVASSQDLLPGKILKVRLLGQDVVLWRNINNEAVAWEDRCPHRGASLARGWVENDALVCPYHGLAFNGEGKCSHIPAHPEAAPPK------------------KSKAC----VTTYNLQERYGMIWVCL-----GTPEQDIAP--FPEWDTPNYHKYFFGPTMYQSSAGRALEN 157 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10662.627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10662.627.1 >prot_L-elsbetiae_contig10662.627.1 ID=prot_L-elsbetiae_contig10662.627.1|Name=mRNA_L-elsbetiae_contig10662.627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp MRVPNLWLAVAHSSSVRAGEVKKVEVDGVPIALWRTAMGAVSAQSDVCIHback to top mRNA from alignment at L-elsbetiae_contig10662:5710..6633+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10662.627.1 ID=mRNA_L-elsbetiae_contig10662.627.1|Name=mRNA_L-elsbetiae_contig10662.627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=924bp|location=Sequence derived from alignment at L-elsbetiae_contig10662:5710..6633+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10662:5710..6633+ >mRNA_L-elsbetiae_contig10662.627.1 ID=mRNA_L-elsbetiae_contig10662.627.1|Name=mRNA_L-elsbetiae_contig10662.627.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1068bp|location=Sequence derived from alignment at L-elsbetiae_contig10662:5710..6633+ (Laminarionema elsbetiae ELsaHSoW15)back to top |