mRNA_L-elsbetiae_contig1066.626.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 153 bits (387), Expect = 1.010e-37 Identity = 100/205 (48.78%), Postives = 127/205 (61.95%), Query Frame = 3 Query: 699 LTDAGVVDSGEALSNAAGCGQEASVKFLLQQWFQRGLACDGIARYINNRSSDDGMTPLFRSIAGDEDVTRGISPKVVRLLIDAGANTTWPVRVINTTGETIFNDTPLVFTNYLRSKKKVWGGEDATEEQTDRLESVRRLLLRVEAVHAVSWLWPRGPLLIGNAADVSRRTASKKPASGTQVALMLPILRRR--RRGVTLAPLFRW 1307 LT+AGVVD+G+AL AAG G EASVKFLL+ + G C Y+N R + G TPL G +P++VR+L+DAGA+TT PV+V+N G +FNDTPL FT KK V G+ AT+E RLE++ RLLLRV+AVHAVSWLWP G IG A + T + P + LMLPIL+RR RR +A L R+ Sbjct: 331 LTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEG-GCGVEGAYLNARDVN-GYTPLVVCTQG----CFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATE----TDPEPPLPALK--LMLPILKRRTKRRCGLVATLLRY 523
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 134 bits (336), Expect = 6.000e-33 Identity = 93/192 (48.44%), Postives = 122/192 (63.54%), Query Frame = 3 Query: 699 LTDAGVVDS-GEALSNAAGCGQEASVKFLLQQWFQRGLACDGIARYINNRSSDDGMTPLFRSIAGDEDVTRGISPKVVRLLIDAGANTTWPVRVINTTGETIFNDTPLVFTNYLRSKKKVWGGEDATEEQTDRLESVRRLLLRVEAVHAVSWLWPRGPLLIGNAADVSRRTASKKPASGTQVALMLPILRRR 1271 LT AGV D+ G L AG G+EASV+FLL+Q +R + + Y N+ S GMTPL SI E + G +P++VRLL+DAGA+TT VRV N G +NDTPL T L ++KV G+ ATEEQ RL+++RRLLLRV+AVHAVSWLWP I +A + S ++P ++L LPIL+RR Sbjct: 11 LTGAGVRDAMGYVLLGTAGLGREASVQFLLRQ--RRKESEMSVHAYANS-SDGSGMTPLSCSI---EWCSSG-NPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLL-REKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPP----LSLTLPILKRR 190
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 130 bits (327), Expect = 6.130e-30 Identity = 97/206 (47.09%), Postives = 119/206 (57.77%), Query Frame = 3 Query: 699 LTDAGVVDSGEALSNAAGCGQEASVKFLLQQWFQRGLACDGIARYINNRSSDDGMTPLFRSIAGDEDVTRGISPKVVRLLIDAGANTTWPVRVINTTGETIFNDTPLVFT-NYLRSKKKVWGGEDATEEQTDRLESVRRLLLRVEAVHAVSWLWPRGPLLIGNAADVSRRTASKKPASGTQVALMLPILRRRRRG--VTLAPLFRW 1307 LT+AGVVD+G AL AAG G E +KFLL+Q R + A Y+N R G+TPL I + P+VVRLL++AGA+TT PV V N G + TPL T N +R K KV G A+ EQ +LE++RRLLLRVEAVHAVSWLWP I AA R + A T V L + + RRR RG V LA L R+ Sbjct: 239 LTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDE--AAYVNTRDRG-GVTPLLWGI-------QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA---RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRY 431
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 127 bits (318), Expect = 9.170e-29 Identity = 88/197 (44.67%), Postives = 118/197 (59.90%), Query Frame = 3 Query: 699 LTDAGVVDSGEALSNAAGCGQEASVKFLLQQWFQRGLACDGIARYINNRSSDDGMTPLFRSIAGDEDVTRGISPKVVRLLIDAGANTTWPVRVINTTGETIFNDTPLVFTNYLRSKKKVWGGEDATEEQTDRLESVRRLLLRVEAVHAVSWLWPR----GPLLIGNAADVSRRTASKKPASGTQVALMLPILRRRRR 1277 LT AGVVD+G+AL+ +AG G+EASVK+LLQ + G Y+N R + G TPL SI + P+V RLL++AGA+TT +R N+ G +F+ TPL T ++ KKV G ++++ RLE +RRLLL+VEAVHA SWLWP G NAA+V+ T + P G +LPILRRR R Sbjct: 222 LTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHY----GPGAYVNVRDRN-GTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKV-DGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGR----VLPILRRRAR 408
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 125 bits (314), Expect = 2.510e-28 Identity = 89/206 (43.20%), Postives = 121/206 (58.74%), Query Frame = 3 Query: 699 LTDAGVVDS-GEALSNAAGCGQEASVKFLLQQWFQRGLACDGIARYINNRSSDDGMTPLFRSIAGDEDVTRGISPKVVRLLIDAGANTTWPVRVINTTGETIFNDTPLVFTNYLRSKKKVWGGEDATEEQTDRLESVRRLLLRVEAVHAVSWLWPRGPLLIGNAADVSRRTASKKPASGTQVALMLPILRRR--RRGVTLAPLFRW 1307 L DAGVVD G AL A G G+EA+V FLL+Q +R Y+N DDG+T L S G+++ + +P++ R L+DAGA+TT V++ T N TPL + N + ++ G AT+EQ RLE+ RR+LLRV AVHAVSW+WP L+ A+ S RTA P TQ+ +LP+LRRR RR + LFR+ Sbjct: 209 LMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS-----YVNIARDDDGLTALLWSFRGNKN--KPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDW-ALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPAN-SPRTAKHSP---TQLTTVLPVLRRRAGRRALLWDTLFRY 402
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 119 bits (298), Expect = 5.920e-26 Identity = 102/244 (41.80%), Postives = 127/244 (52.05%), Query Frame = 3 Query: 618 QMLRQ*KRRSIGA--------RICRDEPMCGHHS*LTDAG-VVDSGEALSNAAGCGQEASVKFLLQQWFQRGLACDGIARYINNRSSDDGMTPLFRSIAGDEDVTRGISPKVVRLLIDAGANTTWPVRVINTTGE-TIFNDTPLVFTNYLRSKKKVWGGEDATEEQTDRLESVRRLLLRVEAVHAVSWLWPRG--PLLIGNAADVSRRTASKKPASGTQVALMLPILRRR--RRGVTLAPLFRW 1307 +M+RQ R G R DE + L DAG VVD+G AL AA G+ +VKFLL++ R D Y+N G TP+ ++ D R SPK+VRLL+DAGANTT V V T ++TPL FT L + +V GE AT+EQ RL+ R LL R EAVHAVSWLW G P + A D TAS A T + M P+LRR+ RGV L LFR+ Sbjct: 200 EMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRR---RQADADA---YVNGTRDPYGRTPVMCAV--DVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRV-DGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETAST--AVATPLRAMSPMLRRKPGTRGVLLKTLFRY 432
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 117 bits (293), Expect = 3.380e-25 Identity = 90/207 (43.48%), Postives = 117/207 (56.52%), Query Frame = 3 Query: 699 LTDAGVVDSGEALSNAAGCGQEASVKFLLQQWFQRGLACDGIARYINNRSSDDGMTPLFRSIAGDEDVTRGISPKVVRLLIDAGANTTWPVRVINTTGETIFNDTPLVFTNYLRSKKKVWGGEDA---TEEQTDRLESVRRLLLRVEAVHAVSWLWPRG-PLLIGNAADVSRRTASKKPASGTQVALMLPILRRRRRGVTLAPLFRW 1307 LTDAGVVD+G AL AAG G EA +KFLL+Q RG A Y+N + G+T L I + P+VV+LL++AGA+TT PV + N GE F+ TPL T L GG A T E+ ++LE +RRLLLR EAVHAVSWLWP P + A + RT + A+ + LM+ R R+G+ LA L R+ Sbjct: 239 LTDAGVVDTGLALVVAAGYGGEAPLKFLLEQ--ARGRKSTDRAAYMNTLNGV-GLTSLLDGI-------QRCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLL------GGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGL-LAALLRY 428
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 112 bits (280), Expect = 1.720e-23 Identity = 87/196 (44.39%), Postives = 109/196 (55.61%), Query Frame = 3 Query: 699 LTDAGVVDSGEALSNAAGCGQEASVKFLLQQWFQRGLACDGIARYINNRSSDDGMTPLFRSIAGDEDVTRGISPKVVRLLIDAGANTTWPVRVINTTGETIFNDTPL-VFTNYLRSKKKVWGGEDATEEQTDRLESVRRLLLRVEAVHAVSWLWPRGPLLIGNAADVSRRTASKKPAS-GTQVALMLPILRRRRRG 1280 LT AGVVD+G AL A G VKFLLQQ Q G + A Y++ G TPL +I D + + SPKVVRLL+DAGA+TT VR G TPL + T LR K + + +E RLE +RRLLLRVEAVHA SWLW G +G A + T ++ ++ Q+ +LPILRRR RG Sbjct: 236 LTTAGVVDTGIALVKATSFGHMDVVKFLLQQ--QNGTPSEKSA-YVSRPRDPCGRTPLICNI--DVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIK--IAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARG 424
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI) HSP 1 Score: 110 bits (276), Expect = 3.080e-23 Identity = 80/172 (46.51%), Postives = 97/172 (56.40%), Query Frame = 3 Query: 699 LTDAGVVD-SGEALSNAAGCGQEASVKFLLQQWFQRGLACDGIARYINNRSSDDGMTPLFRSIAGDEDVTRGISPKVVRLLIDAGANTTWPVRVINTTGETIFNDTPLVFTNYLRSKKKVWGGEDATEEQTDRLESVRRLLLRVEAVHAVSWLWPRGPLLIGNAADVSRRTA 1211 LT AG VD SG AL C EAS K L+Q + A IN+R S G+T L SI T P++VRLLI+AGA+TT +R N+ GE N TPL T +K + GE ATEE RLE++RRLLLR EAVHAVSWLWP +G+AA+ R A Sbjct: 222 LTGAGAVDTSGSALM----CAAEASFKHFLRQRLKEEKGGVEYAS-INDRISS-GLTALVFSIQRCLSQT----PRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAAEKWPRAA 383
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 110 bits (275), Expect = 4.610e-23 Identity = 113/230 (49.13%), Postives = 131/230 (56.96%), Query Frame = 1 Query: 1 PGQQQWPRGPWNDLHKAIYRGSAELTLALLLLGSINIDEGDPRGCTPLMLAAQEGHLCIVRILLGRRANVSIASKEGTTALHVSAKNGYLAVIIDLVVAGADLEARESCHXXXXXXXXXXXXXXXXXXXXXXXXXKKDCRSRDGXXXXXXXXXXXXXXXXXXXXRAKASPLLAATGSHGSTDIVPLVMAVHRGHSEVVREFI-QVGIKCCGSESDGLLALVFAAMSRCVD 687 P Q++WPRGP N+LH A GS + T A+L G INI++GDP G TPLM+A+Q G+ IVRIL+ ANV I + G TA AGADLEA S + XXXXXXXXXXXX + R D XXXXXXXXXXXXXXXXXX AKA PLL VPL A +G S VVREF+ Q+GI CG S G AL AA + VD Sbjct: 4 PAQEKWPRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDR-FVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVD 232 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1066.626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1066.626.1 >prot_L-elsbetiae_contig1066.626.1 ID=prot_L-elsbetiae_contig1066.626.1|Name=mRNA_L-elsbetiae_contig1066.626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=186bp MLAAQEGHLCIVRILLGRRANVSIASKEGTTALHVSAKNGYLAVIIDLVVback to top mRNA from alignment at L-elsbetiae_contig1066:17107..18413+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1066.626.1 ID=mRNA_L-elsbetiae_contig1066.626.1|Name=mRNA_L-elsbetiae_contig1066.626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1307bp|location=Sequence derived from alignment at L-elsbetiae_contig1066:17107..18413+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1066:17107..18413+ >mRNA_L-elsbetiae_contig1066.626.1 ID=mRNA_L-elsbetiae_contig1066.626.1|Name=mRNA_L-elsbetiae_contig1066.626.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1116bp|location=Sequence derived from alignment at L-elsbetiae_contig1066:17107..18413+ (Laminarionema elsbetiae ELsaHSoW15)back to top |