mRNA_L-elsbetiae_contig10651.619.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI) HSP 1 Score: 250 bits (638), Expect = 1.020e-72 Identity = 222/359 (61.84%), Postives = 233/359 (64.90%), Query Frame = 1 Query: 1 RLQIPAGPAAMRLVHVDLFAVEREVFHVASKGRCRDRVSGFFRGYEERGEAPPFLFILNILVPGNPVVATVMYWALD-------GAGDGEEPPSSSASAAPGSG--HSTFLKMLERYAEVPGSGYKKLDRVRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPEGARRPHXXXXXXXXSAPLPR------------AAEGGSGHQSMRHGGIDGSSSGGGVGNGADAGESSFLEPGRLEPGAGTGAGTVTPSQQEXXXXXXXXXXXRGRWPPVSPLADRNSDPAGLLPEDDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVETDV 1014 R +IPAGPAAMRLVHVD F+VE EVFHVASKGRCRDRVS F + YE++GEA PFLFILNILVPGNPVVATVMY ALD G G GEE SS A G H TFL ML RYAEVPGSGY KL+R RS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX EGG+G + G G GA+A L G G G G ADRNSDPAGLLP DDFRNQRFKLIPS+VSGPFIVRKAVGNKPALLGRKV+QRYFRGPGYVETDV Sbjct: 256 RKKIPAGPAAMRLVHVDFFSVEGEVFHVASKGRCRDRVSAFLKSYEDKGEAAPFLFILNILVPGNPVVATVMYLALDQTTQRRDGVGLGEEGVSSPVPAGGGDSARHDTFLAMLARYAEVPGSGYNKLERTRSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAGVAGLEGGNGPPAAE----------GAAGAGAEA-----LSTGAASRGGGLGGAP----------------------------ADRNSDPAGLLPVDDFRNQRFKLIPSVVSGPFIVRKAVGNKPALLGRKVSQRYFRGPGYVETDV 571
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: A0A835ZES7_9STRA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 3.500e-19 Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 1 Query: 862 DDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVETDV 1014 DDFRN+RFKLIPSIV GPF+VR AVGNKPALLGRK+TQRY+RG YVETDV Sbjct: 1 DDFRNERFKLIPSIVEGPFLVRGAVGNKPALLGRKLTQRYYRGAHYVETDV 51
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: A0A7S2WM21_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM21_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 4.070e-18 Identity = 48/83 (57.83%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 808 PVSPLADRNSDPAGLLPEDDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVETDVGELQIHAGTAYTGN 1056 P +P + AGL P D FRNQRFKLIP IV GPF+VR AVG KPALLG+K+TQRY+RG Y+ETDV H G+ N Sbjct: 254 PSNPQSPTEEGEAGLSPSDHFRNQRFKLIPRIVDGPFLVRNAVGAKPALLGQKLTQRYYRGKNYIETDV-----HVGSNAVAN 331
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: A0A7S2CMY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMY1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.740e-15 Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 805 PPVSPLADRNSDPAGLLPEDDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVETDVGELQIHAGTAYTGN 1056 PP S D AG+ P + RNQRFKLIP+I GPF+V++AVG KPALLG+K+TQRYFRG YVETDV H G++ N Sbjct: 357 PPASDTPD-----AGVYPLEHLRNQRFKLIPAITEGPFLVKQAVGAKPALLGQKLTQRYFRGEHYVETDV-----HVGSSAIAN 430
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: A0A7S3XTA9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTA9_HETAK) HSP 1 Score: 79.3 bits (194), Expect = 6.820e-14 Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 1 Query: 835 SDPA--GLLPEDDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVETDV 1014 +DPA G LP D F+N RFKL+PSIV GP+I ++AV NKPA+LG+K+TQRYFR Y+E D+ Sbjct: 27 ADPADEGRLPADAFQNLRFKLVPSIVEGPWICQRAVKNKPAILGQKITQRYFRTEHYLEVDL 88
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 8.800e-13 Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 835 SDPAGLLPEDDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVETDV 1014 SD G DF+N+RFKLIPSIV GP +++ AVGNKP +LG+K+TQRYFRG YVE DV Sbjct: 698 SDRGGRYALSDFKNKRFKLIPSIVDGPSMIKWAVGNKPTILGQKLTQRYFRGEDYVEVDV 757
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: A0A6H5JGP3_9PHAE (EDR2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP3_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 5.790e-12 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 838 DPAGLLPEDDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVETDV 1014 D G LP +D RN+R KL P ++ GP++VRKAVG KP ++G+K+T RYFR PGY E D+ Sbjct: 16 DLEGGLPLNDIRNRRLKLFPKVLEGPWVVRKAVG-KPCVIGKKLTARYFRRPGYFEVDI 73
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: A0A835YT80_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT80_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.110e-11 Identity = 38/70 (54.29%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 805 PPVSPLADRNSDPAGLLPEDDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVETDV 1014 PP S ++ G+ F N RFKLIP IV GP++VR+AVG P LLG KVT RYFRG YVET+V Sbjct: 37 PPASDVS------GGIRHSYAFHNSRFKLIPQIVDGPWVVRRAVGAVPCLLGTKVTTRYFRGEHYVETNV 100
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: A0A7S2B576_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B576_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.190e-11 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 862 DDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVET--DVGELQI 1029 D +RNQRFKLIPSIV GP+IV++ +G KPAL+G K+ Q Y GP Y+E D+G I Sbjct: 1 DTYRNQRFKLIPSIVEGPWIVKRGIGQKPALVGTKLHQTYHHGPNYLELCLDIGSSAI 58
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Match: I2CPB9_NANGC (Pleckstriny domain-containing expressed (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPB9_NANGC) HSP 1 Score: 74.7 bits (182), Expect = 5.290e-11 Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 859 EDDFRNQRFKLIPSIVSGPFIVRKAVGNKPALLGRKVTQRYFRGPGYVET--DVGELQIHAGT 1041 +D+ +N+RFKLIPSI+ GP +VR VGNKP LLG K+TQRY+ GPGY+E D+G + + T Sbjct: 227 DDEEKNRRFKLIPSIIEGPALVRLMVGNKPVLLGNKLTQRYWTGPGYLEIGIDIGSSAMASRT 289 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10651.619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10651.619.1 >prot_L-elsbetiae_contig10651.619.1 ID=prot_L-elsbetiae_contig10651.619.1|Name=mRNA_L-elsbetiae_contig10651.619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=343bp MRLVHVDLFAVEREVFHVASKGRCRDRVSGFFRGYEERGEAPPFLFILNIback to top mRNA from alignment at L-elsbetiae_contig10651:3136..6658+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10651.619.1 ID=mRNA_L-elsbetiae_contig10651.619.1|Name=mRNA_L-elsbetiae_contig10651.619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3523bp|location=Sequence derived from alignment at L-elsbetiae_contig10651:3136..6658+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10651:3136..6658+ >mRNA_L-elsbetiae_contig10651.619.1 ID=mRNA_L-elsbetiae_contig10651.619.1|Name=mRNA_L-elsbetiae_contig10651.619.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2058bp|location=Sequence derived from alignment at L-elsbetiae_contig10651:3136..6658+ (Laminarionema elsbetiae ELsaHSoW15)back to top |