mRNA_L-elsbetiae_contig1065.616.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: D8LSB9_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB9_ECTSI) HSP 1 Score: 1112 bits (2876), Expect = 0.000e+0 Identity = 595/840 (70.83%), Postives = 661/840 (78.69%), Query Frame = 1 Query: 196 FEVTYGEAPSHTTEAVIVGLKPGKAYQFHVATVSAERMLVPGSSIVSDPVRLPEAKYEKAWFFEGGEDDIKWAAFEGLGPESVGPTGAEGGGAAGSSTALDDIRCSPTLTRCFTGLRSLGLVVPPGLAGGAYVDTPVKEGWLYVVKAKVFHEGEEAKQDPSAAGAGTGAGTMGSKLAMMTNWAAGRKGSKPAAVTTRLVLWDMRDGKQMSAPAVKTGEWEELECQIVPFRSEHLRITIQSGGDSG-GNIYVDAVELFHGGPTPAERAISSVVSCMDQPRSMPSKVLIRLESARNVRAADTIGTSDPFVKVFVGGVEVHRTKVIPMTLSPVWDETFFVSPETPGEDKA----AGSDGRAVRFEIWDHDMHREGDYLGEVCLTNDELKAAPPHRAEHKVAERLARSGDGTNDGVNNNAAQTAANSRLKKGQTRRGAGGSRAGGMGASGSPTILALAVQVSWPEDPESVEGKLVRNLQNEQALLSTRVEALK--------ELSLAALREPRNIEDAAKAKEMLLRARAPEAAVWVLSDPNFLEHACRLLVGFVKLGATTGGAEAGFGLCRRLRLFVLQLSPAIVAVRCLRRNVGPPEVLLDLLAKLYVGQQAALHEDAVEIRSFFYSLVLHIDTSAPAQALVREISGGGREFPPGLLALFRRYRTRIPALPGLWRGSVLQELSAEEAHPPDTELDDLEANEEDGDDPQLLHGKAHDNNRQGEEPSVLELVRRNLAVALMVVPPLFKAVVGARRIGVGSKGGGSCEMPVGTVLLLDGLLLMCAALGGGCFRVNRQRFSAMAGTWLFPSLFLAFLLHLGLVAGLLVSIAKVNSVEAGGGRGGDDG 2676 F+VTYGEAPSH EAVIVGLKPGKAYQF VA++SAERMLVPGSSIVSDPV+LPEA+YEKAWFFEGGEDDIKWAAFEGLGPE+VG G STALDDIRCSP+ TRCFTGLRSL LVVP GLAGGAYVDTPVKEGWLYVVKAKVFHE E A GAG GS+LAMMT W AGRKGSK + VTTRLVLWDMRDGK+MSAPAVKTGEWE LECQIVPFRSEHLR+ IQSGG+ NIYVDAVELFHGGPTPAERAIS+ V MD+PR MPSKV FVG EVHRTKVIPMTLSPVWDETFF+SPETPG A +DG +RFE+WDHD+H +GDYLGEVCLT+D LK APPHR EH+ + R G D + A + +LK +T+RG R GGMGA PTILALA+QVSWP+DPES EGKLVR LQ+EQ LLS RV ALK ELS+AALR PRNIEDAAKAK +LLR+RA EAAVWVL+DPNFLE ACRLL+G V+LG G +EAGFGLCRRLRLFVLQLSPA+VAVRCLR +VGPPE+LL+LLAKLYVGQQAALHED V IR FFYSLVLHIDTSAPAQALVR+ISGG RE P GL+A+FRRYRTRIP LPGLWR ++LQ+LSAEEAHPPD E DDLEANE+D D L+ + NR+ EEPS+ + +R +L VALM VPPLFKAVVG RRIG GSCE PVGTVL+LDGL+LMCA GGGCFR+NR+RFSA+AGTWLFP+LFLAFLLHLGLVAGLLVS+A+V+SVEAG G+G DDG Sbjct: 13 FKVTYGEAPSHEAEAVIVGLKPGKAYQFLVASISAERMLVPGSSIVSDPVQLPEAEYEKAWFFEGGEDDIKWAAFEGLGPENVGAAGGXXXXXXXXSTALDDIRCSPSPTRCFTGLRSLCLVVPAGLAGGAYVDTPVKEGWLYVVKAKVFHEEEGGGVGDGAGAEAEGAGRKGSRLAMMTGWTAGRKGSK-SNVTTRLVLWDMRDGKEMSAPAVKTGEWEALECQIVPFRSEHLRVAIQSGGEGRESNIYVDAVELFHGGPTPAERAISAAVDLMDEPRPMPSKV-------------------------FVGNAEVHRTKVIPMTLSPVWDETFFLSPETPGGGDANAPGLNADGDGIRFEMWDHDLHGQGDYLGEVCLTSDALKVAPPHRVEHEAVKDPIR---GAGDSGDRTATEVVI-PKLKPARTKRGGHRGR-GGMGAVPPPTILALAIQVSWPKDPESAEGKLVRILQDEQGLLSARVNALKRILPTLLQELSMAALRAPRNIEDAAKAKILLLRSRAAEAAVWVLADPNFLEDACRLLIGLVQLGHDAGHSEAGFGLCRRLRLFVLQLSPAVVAVRCLRASVGPPEILLELLAKLYVGQQAALHEDVVNIRGFFYSLVLHIDTSAPAQALVRDISGGARELPDGLVAMFRRYRTRIPPLPGLWRPTMLQKLSAEEAHPPDLEGDDLEANEDDHD----LNPASRGGNRE-EEPSLPDRIRAHLTVALMAVPPLFKAVVGGRRIGA----PGSCEQPVGTVLVLDGLVLMCAVFGGGCFRINRRRFSALAGTWLFPTLFLAFLLHLGLVAGLLVSLARVDSVEAGSGQGEDDG 812
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: A0A6H5L382_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L382_9PHAE) HSP 1 Score: 475 bits (1222), Expect = 5.130e-157 Identity = 257/396 (64.90%), Postives = 293/396 (73.99%), Query Frame = 1 Query: 1657 LAALREPRNIEDAAKAKEMLLRARAPEAAVWVLSDPNFLEHACRLLVGFVKLGATTGGAEAGFGLCRRLRLFVLQLSPAIVAVRCLRRNVGPPEVLLDLLAKLYVGQQAALHEDAVEIRSFFYSLVLHIDTSAPAQALVREISGGGREFPPGLLALFRRYRTRIPALPGLWRGSVLQELSAEEAHPPDTELDDLEANEEDGDDPQLLHGKAHDNNRQGEEPSVLELVRRNLAVALMVVPPLFKAVVGARRIGVGSKGGGSCEMPVGTVLLLDGLLLMCAALGGGCFRVNRQRFSAMAGTWLFPSLFLAFLLHLGLVAGLLVSIAKVNSVEAGGGRGGDDGRVTCSSGTFAWGIVFLVVDLFCLVAPPVVWCMRCYDRVTRSTPAVA--TALVVPDE 2838 +AALR PRNIEDAAKAK +LLR+RA EAAVWVL+DPNFLE ACRLL+G + LL+ LAKLYVGQQAALHED V IR FFYSLVLHIDTSAPAQALVREISGG RE P GL+ALF RYRTRIP LPGLWR ++LQ++SAEEAHPPD E DDLEANE+D D L+ + R+GE PS+ + +R +L VALM +PPLFKAV G RR+G GSCE PVGTVL+LDGL+LMCA GGGCFR+NR RFS +AGTWLFP+L LAFLLHLGLVAGLLVS+A+V+SVEAGGG+G DDG+VTCSSGTFAWG++FLV+DL LVAPPV WC RCYDR TRS PAVA + LVVPDE Sbjct: 1 MAALRAPRNIEDAAKAKILLLRSRAAEAAVWVLADPNFLEDACRLLIGLI---------------------------------------------LLEFLAKLYVGQQAALHEDVVNIRGFFYSLVLHIDTSAPAQALVREISGGARELPDGLVALFHRYRTRIPPLPGLWRSTMLQKISAEEAHPPDLEGDDLEANEDDHD----LNPASRGGTREGE-PSLPDRIRAHLTVALMAMPPLFKAVAGGRRVGA----PGSCEQPVGTVLVLDGLVLMCAVFGGGCFRINRHRFSILAGTWLFPTLLLAFLLHLGLVAGLLVSLARVDSVEAGGGQGKDDGKVTCSSGTFAWGVMFLVLDLLLLVAPPVWWCARCYDRATRSVPAVAATSVLVVPDE 342
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: A0A835Z918_9STRA (C2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z918_9STRA) HSP 1 Score: 188 bits (478), Expect = 4.400e-45 Identity = 130/399 (32.58%), Postives = 183/399 (45.86%), Query Frame = 1 Query: 94 DVSTTSVRVTWPKFSDKKYPV---------------------YAYRVCTAEVGSG--FEVTYGEAPSHTTEAVIVGLKPGKAYQFHVATVSAERMLVPGSSIVSDPVRLPEAKYEKAWFFEGGEDDIKWAAFEGLGPESVGPTGAEGGGAAGSSTALDDIRCSPTLTRCFTGLRSLGLVVPPGL---AGGAYVDTPVKEGWLYVVKAKVFHEGEEAKQDPSAAGAGTGAGTMGSKLAMMTNWAAGRKGSKPAAVTTRLVLWDMRDGKQMSAPAVKTGEWEELECQIVPFRSEHLRI---TIQSGGDSGGNIYVDAVELFHGGPTPAERAISSVVSCMDQPRSMPSKVLIRLESARNVRAADTIGTSDPFVKVFVGGVEVHRTKVIPMTLSPVWDETFFV 1203 DV+TT++R+ WP + + PV + Y + + VGSG F + T AVI LK Y+FH+A +S E M++PGSS+VS P+ LPE KYE AWFFE DD++W A+EG + GA +S D + RCFTGLRS+ + VP G GG ++DTPV +G YV A V S AV + +WE+L C+I S LRI T+ Y+DAVEL GPT E A +++ + + S PS + + + A ++RAAD +G SDP+V V+ G E+ +T+V+PMTL+P WDETF + Sbjct: 709 DVTTTALRLGWPVPNVARCPVCCATIVSGKSCLLLVEGRSVIHGYCISSDIVGSGQGFHTLIKHTGTTATSAVIAALKQRLTYRFHIAALSDEGMVIPGSSVVSAPIALPEPKYEAAWFFESTADDVQWRAYEGDALVADQQDGAL------ASMEGDAVEAEMKKERCFTGLRSMRVAVPAGCDGGCGGIFIDTPVTDGRRYVCSAMV------------------------------------------------------------STGAVLSEQWEQLTCEITIQHSHTLRIAVATMPPVPPGSCTFYLDAVELVQAGPTDFELAAAALDAAVHCSWSSPSSLTVTVAGASSLRAADVMGASDPYVCVYWCGKEIGQTQVMPMTLTPRWDETFVL 1041
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: A0A1Y1HWN3_KLENI (Calcium-dependent lipid-binding protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWN3_KLENI) HSP 1 Score: 73.6 bits (179), Expect = 1.060e-9 Identity = 46/120 (38.33%), Postives = 64/120 (53.33%), Query Frame = 1 Query: 1033 MPSKV----LIRLESARNVRAADTIGTSDPFVKVFV-GGVEVHRTKVIPMTLSPVWDETFFVSPETPGEDKAAGSDGRAVRFEIWDHDMHREGDYLGEVCLTNDELKAAPPHRAEHKVAE 1377 MPS V + + A +RAAD GTSDPFV+VF+ G +TKVIP TL+PVWD+TF E D ++ E+WDHD + D+LG V +T + + K++E Sbjct: 425 MPSIVRGVLTVTVRKAEELRAADMGGTSDPFVRVFMRNGDMKKKTKVIPKTLNPVWDQTFEFLVEDAARDM--------LQLEVWDHDTFGK-DFLGRVSITLTRVMKEGEYEDVFKLSE 535
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: A0A8J9ZXX4_BRALA (PCLO protein n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A8J9ZXX4_BRALA) HSP 1 Score: 71.2 bits (173), Expect = 1.040e-8 Identity = 53/189 (28.04%), Postives = 81/189 (42.86%), Query Frame = 1 Query: 841 TGEWEELECQIVPFRSEHLRITIQSGGDSGGNI-YVDAVELFHGGPTPAERAISSVVSCMDQPRSMPSK------------------------VLIRLESARNVRAADTIGTSDPFVKVFV----GGVEVHRTKVIPMTLSPVWDETFFVSPETPGEDKAAGSDGRAVRFEIWDHDMHREGDYLGEVCL 1320 TG+ E +IV + + I I+S + + + A + G P+ +S PR +PSK ++I + ARN+ A D G SDPFVKV++ RTK IP TL+P W++T T + K+ + V F +WD+D D+LGEV + Sbjct: 1772 TGKTYEEVLKIVSVSNGEIEIVIRSDFNMLSDTQHQSAADRKRSGFAPSPILPASPAMARQAPRKLPSKEASKETDITGEIELQMRYDETTKDLIININRARNLAAKDINGFSDPFVKVYLLPGRNAENKRRTKYIPKTLNPEWNQTVIYKGITKEQLKS-----KTVEFTVWDYDRFTPNDFLGEVLI 1955
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: A0A7S0TIQ5_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TIQ5_HEMAN) HSP 1 Score: 66.6 bits (161), Expect = 1.130e-8 Identity = 41/130 (31.54%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 934 NIYVDAVELFHGGPTPAERAISSVVSCMDQPRSM-PSKVLIRLESARNVRAADTIGTSDPFVKVFVGGVEVHRTKVIPMTLSPVWDETFFVSPETPGEDKAAGSDGRAVRFEIWDHDMHREGDYLGEVCL 1320 +++VD G P P+ ++ + QP+ P +V++ + SAR + AAD GTSDPF +V +G + +TKV+P +L P W+E+F ++ E GE +++DHD+ D+LG + Sbjct: 2 DVWVDLGGTREGPPDPSSHG-RCLIRLLRQPKPTGPMEVVVMVRSARGLLAADKGGTSDPFCEVSIGRKK-RKTKVVPKSLDPTWEESFTMALEA-GE--------CTFTCDVFDHDVIGNSDFLGRALV 120
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: A0A7S2WT27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT27_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 2.790e-8 Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 1045 VLIRLESARNVRAADTIG-TSDPFVKVFVGGVEVHRTKVIPMTLSPVWDETFFVSPETPGEDKAAGSDGRAVRFEIWDHDMHREGDYLGEVCLTNDELKAAPPHRAEHKVAER 1380 V + + +A + AD+ G SDPF + +VH+T+V+ T VW F P P GS GR V E+WD DM ++GD+LG+VCL + ++ P + K+ + Sbjct: 68 VEVNILAASELARADSFGGKSDPFCLAYWNHEQVHKTRVVNNTTDAVWKGEAFTVPVQPD-----GSGGRLV-VEVWDADMLKKGDFLGQVCLRSVDVLFPPAGQMTFKLERK 174
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: T1KC64_TETUR (Uncharacterized protein n=4 Tax=Tetranychus urticae TaxID=32264 RepID=T1KC64_TETUR) HSP 1 Score: 68.2 bits (165), Expect = 7.210e-8 Identity = 36/109 (33.03%), Postives = 57/109 (52.29%), Query Frame = 1 Query: 1051 IRLESARNVRAADTIGTSDPFVKVFVGGVEVHRTKVIPMTLSPVWDETFFVSPETPGEDKAAGSDGRAVRFEIWDHDMHREGDYLGEVCLTNDELKAAPPHRAEHKVAE 1377 + L+SA N+ A D+ GTSDP+VK+ G +V+++K+IP L+PVWDE ++ E + + +++DHD DYLG L L+ E + E Sbjct: 253 LHLQSASNLLAKDSCGTSDPYVKLKFGNKQVYKSKIIPKNLNPVWDEYTVLAIEDVFQ---------PLSIKVYDHDFGLTDDYLGTATLDLTRLELNKTTELEFNLTE 352
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: A0A6P4XLY6_BRABE (protein piccolo-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XLY6_BRABE) HSP 1 Score: 67.4 bits (163), Expect = 1.080e-7 Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 1 Query: 1045 VLIRLESARNVRAADTIGTSDPFVKVFV----GGVEVHRTKVIPMTLSPVWDETFFVSPETPGEDKAAGSDGRAVRFEIWDHDMHREGDYLGEVCL 1320 ++I + ARN+ A D G SDPFVKV++ RTK IP TL+P W++T T + K+ + V F +WD+D D+LGEV + Sbjct: 255 LIININRARNLAAKDINGFSDPFVKVYLLPGRNAENKRRTKYIPKTLNPEWNQTVIYKGITKEQLKS-----KTVEFTVWDYDRFTPNDFLGEVLI 345
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Match: A0A671STL6_9TELE (Multiple C2 and transmembrane domain-containing protein 1-like n=2 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671STL6_9TELE) HSP 1 Score: 66.2 bits (160), Expect = 2.350e-7 Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 1 Query: 850 WEELECQIVPFRSEHLRITI-------QSGGDSGGNIYVDAVELFHGGPTPAERAISSVVSCMDQPRSMPSKVLIRLESARNVRAADTIGTSDPFVKVFVGGVEVHRTKVIPMTLSPVWDETFFVSPETPGEDKAAGSDGRAVRFEIWDHDMHREGDYLGEVCLTNDELKAAPPHRAE 1362 W+E C IV E L I + Q +Y+D++EL +S + R + S IRL RN+ D G SDP+VK +G ++ +++K IP TL+P W E F + +G + +WD D+ R D++G+ L +L H+ E Sbjct: 96 WDERVCLIVDNLQEPLYIKVFDYDFGLQDDFMGSAYLYLDSLELQRYPQQQQNLRLSDLHRKSQLGRGIVS---IRLMEGRNLIPMDQNGLSDPYVKFKLGPLK-YKSKTIPKTLNPQWREQFDLH--------LYDEEGGILEISVWDKDIGRRDDFIGQCQLDLSKLSREKTHKLE 261 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1065.616.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1065.616.1 >prot_L-elsbetiae_contig1065.616.1 ID=prot_L-elsbetiae_contig1065.616.1|Name=mRNA_L-elsbetiae_contig1065.616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=936bp MALKDGRVMTPAFQAGQVHCHDVSTTSVRVTWPKFSDKKYPVYAYRVCTAback to top mRNA from alignment at L-elsbetiae_contig1065:16228..21962- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1065.616.1 ID=mRNA_L-elsbetiae_contig1065.616.1|Name=mRNA_L-elsbetiae_contig1065.616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5735bp|location=Sequence derived from alignment at L-elsbetiae_contig1065:16228..21962- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1065:16228..21962- >mRNA_L-elsbetiae_contig1065.616.1 ID=mRNA_L-elsbetiae_contig1065.616.1|Name=mRNA_L-elsbetiae_contig1065.616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5616bp|location=Sequence derived from alignment at L-elsbetiae_contig1065:16228..21962- (Laminarionema elsbetiae ELsaHSoW15)back to top |