mRNA_L-elsbetiae_contig1064.608.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: D8LBM5_ECTSI (Similar to 20S proteasome alpha5 subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM5_ECTSI) HSP 1 Score: 476 bits (1224), Expect = 9.940e-162 Identity = 283/422 (67.06%), Postives = 313/422 (74.17%), Query Frame = 1 Query: 1 MKLSFGALLLLSPGCMRVGSVAHVRRKAPVREKKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDV-RMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPFEGMTVRRAMAVVLGVLKETLGDD-FSVDRLEMACVDLRRTCGTGVDGDGEGSGDAGGAGGSVSGXXXXXXXXXXXXXXXXXXXXXXXXVGPSVK---DAASAAPETGSDAG------SGNRNSA-RSDGNGAGGGVLEETGSRNTGDGPSS-SGASPSSAADYFVPRYGYFRRVPQSEMEELLAEGSASGD 1227 M+ +FG LLL+SPG +RV SVAHVRRKAPVREKKAYDTSVR+FSPDGSIYQVEYAV+AA+KGGLTIGVQTD+GLVLAA GRRRSPLLK++SVSKIA+VD RMCCAMSGLLPDGRLLLD+ARTWVQEHRFEFDEAPSVEAVA+QLSRLALKFNGYDKDG+AG+G +E GGG AMSRPVGVALLMAG+D G+RPVLYHL PSGAYVQWRARA+G+K AAAEAKL+ GPFEGM+VRRAMA VLGVL+E LGDD FS DRLEM CVD+ G G GSGD GG V GP + SAAP + S G SG RN R G+ GGGVLE DG S+ SG SSAA FVPRYGYFRRVP+SEM+ELLA GS GD Sbjct: 1 MRFTFGVLLLISPGALRVRSVAHVRRKAPVREKKAYDTSVRAFSPDGSIYQVEYAVEAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGPAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCVDMM--------GGGRGSGDGGGGERGVCSPGAEHGATSASDHDNVGGGGDGAISGPPFAGEGSSVSAAPPSLSGGGVNDGSASGVRNFVGRDSGSSGGGGVLEGGVEVGREDGSSAASGVGRSSAAASFVPRYGYFRRVPKSEMDELLA-GSTRGD 413
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: E9HGR7_DAPPU (Proteasome subunit alpha type n=8 Tax=Mandibulata TaxID=197563 RepID=E9HGR7_DAPPU) HSP 1 Score: 180 bits (457), Expect = 1.570e-49 Identity = 98/232 (42.24%), Postives = 140/232 (60.34%), Query Frame = 1 Query: 97 KKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPFEGMTVRRAMAVVLGVLKETLGDDFSVDRLEMACV 792 + YD V +FSP+G ++QVEYA++A + G IG+QT EG+VLA + R SPL++ ++ KI E+D + CA+SGL+ D R ++D AR Q H F +DE SVE+VA +S LA++F D DG A MSRP GVA+L AGID P L+H+ PSG YVQ+ A+A+G S A+ L A + MT++ AM L +LK+ + + S +E+A V Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLMEPTTIEKIVEIDKHIGCAVSGLMADSRTMVDRARVEAQNHWFTYDEKMSVESVAQAVSNLAIQFGDSDDDGNA--------------MSRPFGVAILFAGIDE-KGPQLFHMDPSGTYVQYDAKAIGSGSEGAQQSLQEAYN-KSMTLKSAMKAALTILKQVMEEKLSSTNVEVAAV 220
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: A0A1X6NLH8_PORUM (Proteasome subunit alpha type n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLH8_PORUM) HSP 1 Score: 180 bits (456), Expect = 2.400e-49 Identity = 101/232 (43.53%), Postives = 138/232 (59.48%), Query Frame = 1 Query: 97 KKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPFEGMTVRRAMAVVLGVLKETLGDDFSVDRLEMACV 792 + YD V +FSP+G ++QVEYA++A + G +G+ T EG++LA + R SPLL +S+ K+ E+D + AMSGL D R L+DH R QEHRF +DE SVE+ L LAL+F G D GR+D G AM+RP GVALL+AG+D P LYH PSG YV+W A+A+G S A+ L A GMT+ A + L LK + + S + +E+A V Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGICTTEGVILAVEKRLTSPLLTPSSIEKVLEIDTHIGAAMSGLTADARTLIDHGRIVTQEHRFTYDEPLSVESTTQSLCDLALRF-GED-------GRDD----GADAMARPFGVALLIAGVDDEGGPALYHTDPSGTYVKWMAKAIGAGSEGAQTALQEAWSA-GMTLAEAEGLALKTLKAVMEEKVSGENVEVAAV 223
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: UPI0002658A20 (proteasome subunit alpha type-5 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002658A20) HSP 1 Score: 179 bits (455), Expect = 3.060e-49 Identity = 94/232 (40.52%), Postives = 139/232 (59.91%), Query Frame = 1 Query: 97 KKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPFEGMTVRRAMAVVLGVLKETLGDDFSVDRLEMACV 792 + YD V +FSP+G ++QVEYA++A + G IG+QT EG VLA + R SPL++S ++ KI E+D + CA+SGL+ D R ++D AR Q H F +DE+ VE+ A +S LA+KF D DG AMSRP GVA+L AGID P L+H+ PSG YV++ A+A+G A+ L + MT++ A+ +L +LK+ + + VD +E+A + Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGCVLAVEKRVTSPLMESTTIEKIVEIDKFIGCAVSGLMADSRTMIDKARVEAQNHWFNYDESMRVESCAQAVSNLAIKFGDNDDDG--------------TAMSRPFGVAILFAGIDEKKGPQLFHMDPSGTYVEFLAKAIGSGCEGAQQALQEKY-HKSMTLKEALKEILVILKQVMEEKLGVDNVEVATI 221
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: A0A1D1XX99_9ARAE (Proteasome subunit alpha type (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XX99_9ARAE) HSP 1 Score: 177 bits (450), Expect = 1.890e-48 Identity = 100/237 (42.19%), Postives = 145/237 (61.18%), Query Frame = 1 Query: 97 KKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPF-EGMTVRRAMAVVLGVLKETLGDDFSVDRLEMACVDLRR 804 + YD V +FSP+G ++QVEYA++A + G +G+QT EG+VLAA+ R SPLL S+S+ KI E+D + CAMSGL D R ++DHAR Q HRF +DEA VE+V + LAL+F G + G E MSRP GVALL+AG+D N P L+H PSG + Q+ A+A+G S A+ +L+ G + + +T+ +A + L VLK+ + + + +E+A V R Sbjct: 10 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTSEGVVLAAEKRVTSPLLVSSSIEKIMEIDKHLGCAMSGLTADSRTMIDHARVAAQSHRFTYDEAIKVESVTQAVCDLALRF------GESAEGEES-------IMSRPFGVALLIAGVDE-NGPQLFHADPSGTFTQFDAKAIGSGSEGAQTELE--GEYHKSITLEKAETLSLRVLKQVMEEKLNNTNVELASVTPER 230
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: M7XIX9_RHOT1 (Proteasome subunit alpha type n=6 Tax=Rhodotorula TaxID=5533 RepID=M7XIX9_RHOT1) HSP 1 Score: 176 bits (446), Expect = 6.590e-48 Identity = 97/232 (41.81%), Postives = 146/232 (62.93%), Query Frame = 1 Query: 97 KKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPFEGMTVRRAMAVVLGVLKETLGDDFSVDRLEMACV 792 + YD V +FSP+G ++QVEYA++A + G T+G+QT EG+VLA + R +SPLL+S SV KI E+D + CAMSGL D R +++HAR Q H F +DE VE+V +S LAL+F G+ ED +MSRP GVALL+AGIDH + P L+H PSG ++++ A+A+G S A+++L + + MT+ +A + L VLK+ + + + +++A V Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIQTSEGVVLAVEKRTQSPLLESDSVEKIMEIDRHIGCAMSGLTADARTMVEHARVTAQNHVFTYDEPIKVESVTQSVSDLALRFG-------EGANEED------ASMSRPFGVALLIAGIDH-HGPQLFHADPSGTFMRYHAKAIGSGSEGAQSELQDSYD-KSMTLAQAKVLALKVLKQVMEEKLDHNNVQLAQV 221
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: A0A7M7ST72_STRPU (Proteasome subunit alpha type n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7ST72_STRPU) HSP 1 Score: 176 bits (445), Expect = 8.420e-48 Identity = 97/232 (41.81%), Postives = 144/232 (62.07%), Query Frame = 1 Query: 97 KKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPFEGMTVRRAMAVVLGVLKETLGDDFSVDRLEMACV 792 + YD V +FSP+G ++QVEYA++A + G IG++T+EG+VLA + R SPL+++ S+ KI E+D + CAMSGL+ D R ++D AR Q H F ++E SVE+V +S LAL+F D AGSG AMSRP GVALL AGID P+LYH+ PSG ++Q+ A+A+G S A+++L + +T++ A L VLK+ + + S +E+A + Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIRTNEGIVLAVEKRVTSPLMEATSIEKIVEIDSHIGCAMSGLIADSRTMIDRARVEAQSHWFTYNEKMSVESVTQAVSNLALQFG----DDEAGSG----------AMSRPFGVALLFAGIDQ-KGPILYHMDPSGTFLQFDAKAIGSGSEGAQSQLQEVF-HKSLTLKEACKESLVVLKQVMEEKLSSTNVEVATI 220
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: A0A1Q3E886_LENED (Proteasome subunit alpha type n=4 Tax=Omphalotaceae TaxID=72117 RepID=A0A1Q3E886_LENED) HSP 1 Score: 175 bits (443), Expect = 3.200e-47 Identity = 98/232 (42.24%), Postives = 142/232 (61.21%), Query Frame = 1 Query: 97 KKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPFEGMTVRRAMAVVLGVLKETLGDDFSVDRLEMACV 792 + YD V +FSP+G ++QVEYA++A + G T+GV+TDEG+VL + R +SPL++S+S+ KI E+D + CAMSGL D R ++DHAR Q H F +DE VE+V + LAL+F D ED MSRP GVALL+AGID P LYH PSG +V+++A+A+G S AA+A+L + MT+R A + L +LK+ + + +++A V Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVRTDEGVVLGVEKRVQSPLIESSSIEKIMEIDAHLGCAMSGLTADARTMIDHARVTAQNHSFTYDEKIKVESVTQAVCDLALRFGESVHD-------ED------AMMSRPFGVALLIAGIDELG-PQLYHTDPSGTFVRYQAKAIGSGSEAAQAELQDKWHSK-MTLREAQLLTLRILKQVMEEKLDRHNVQLAQV 221
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: UPI001C7A0D83 (proteasome component pup2 n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7A0D83) HSP 1 Score: 174 bits (440), Expect = 4.600e-47 Identity = 96/232 (41.38%), Postives = 143/232 (61.64%), Query Frame = 1 Query: 97 KKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPFEGMTVRRAMAVVLGVLKETLGDDFSVDRLEMACV 792 + YD V +FSP+G ++QVEYA++A + G T+G++TD+G+VLA + R +SPL++S+S+ KI E+D + CAMSGL D R ++DHAR Q H F +DE VE+V + LAL+F D ED MSRP GVALL+AGID P LYH PSG +V+++A+A+G S AA+A+L + MT++ A + + VLK+ + + +++A V Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTTLGIRTDQGVVLAVEKRVQSPLIESSSIEKIMEIDRHLGCAMSGLTADARTMIDHARVTAQNHSFTYDEKIKVESVTQAVCDLALRFGESVHD-------ED------AMMSRPFGVALLIAGIDEVG-PQLYHTDPSGTFVRYQAKAIGSGSEAAQAELQEKW-YSQMTLQEANILAMRVLKQVMEEKLDQHNVQLAQV 221
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Match: A0A1Y2BW89_9BASI (Proteasome subunit alpha type (Fragment) n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2BW89_9BASI) HSP 1 Score: 174 bits (440), Expect = 4.880e-47 Identity = 96/232 (41.38%), Postives = 141/232 (60.78%), Query Frame = 1 Query: 97 KKAYDTSVRSFSPDGSIYQVEYAVQAAEKGGLTIGVQTDEGLVLAAQGRRRSPLLKSASVSKIAEVDVRMCCAMSGLLPDGRLLLDHARTWVQEHRFEFDEAPSVEAVAAQLSRLALKFNGYDKDGRAGSGREDEGGGGGLAMSRPVGVALLMAGIDHGNRPVLYHLGPSGAYVQWRARAVGEKSAAAEAKLDRAGPFEGMTVRRAMAVVLGVLKETLGDDFSVDRLEMACV 792 + YD SV SFSP+G ++QVEYA++A + G T+G+QT +G+VLA + R +SPLL S SV KI E+D + CAMSGL D R +++HAR Q H F +DE VE+V + LAL+F G G ++E +MSRP GVALL+AG D P LYH PSG ++++ A+A+G S A+ +L + + MT+ A + L VLK+ + + + +++A V Sbjct: 4 RSEYDRSVSSFSPEGRLFQVEYAIEAIKLGSTTVGIQTSQGVVLAVEKRTQSPLLDSDSVEKIMEIDSHVACAMSGLTADARTMVEHARVTSQNHSFTYDEPIKVESVTQAVCDLALRF---------GEGADEEE----ASMSRPFGVALLIAGYDQSGGPQLYHADPSGTFMRYDAKAIGSGSEGAQNELQDSYN-KSMTLEEAQVLALKVLKQVMEEKLDHNNVQLAQV 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1064.608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1064.608.1 >prot_L-elsbetiae_contig1064.608.1 ID=prot_L-elsbetiae_contig1064.608.1|Name=mRNA_L-elsbetiae_contig1064.608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=422bp MKLSFGALLLLSPGCMRVGSVAHVRRKAPVREKKAYDTSVRSFSPDGSIYback to top mRNA from alignment at L-elsbetiae_contig1064:13804..16981+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1064.608.1 ID=mRNA_L-elsbetiae_contig1064.608.1|Name=mRNA_L-elsbetiae_contig1064.608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3178bp|location=Sequence derived from alignment at L-elsbetiae_contig1064:13804..16981+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1064:13804..16981+ >mRNA_L-elsbetiae_contig1064.608.1 ID=mRNA_L-elsbetiae_contig1064.608.1|Name=mRNA_L-elsbetiae_contig1064.608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2532bp|location=Sequence derived from alignment at L-elsbetiae_contig1064:13804..16981+ (Laminarionema elsbetiae ELsaHSoW15)back to top |