mRNA_L-elsbetiae_contig106.575.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig106.575.1
Unique NamemRNA_L-elsbetiae_contig106.575.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: D7G647_ECTSI (RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G647_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 8.400e-127
Identity = 182/200 (91.00%), Postives = 192/200 (96.00%), Query Frame = 2 
Query:  215 MSERKTEGKDHKEDDDEXXLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLDDGAEIKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLL 814
            MSERKTEGKDH ED DE  LE+PDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNA+LDDG E+KVDFWDTAGQERFSSMHPSYYYRAHACI+VFDVTRKATYKNLS+WYGELRQY E IPCLL+ANKIDVDY VTKKSFKFAQQH+LPFFFVSAADGTNVVKAF+EA+KAG+EFKKNGGDFVDEALSLL
Sbjct:    1 MSERKTEGKDHMEDGDED-LEDPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNAKLDDGVEVKVDFWDTAGQERFSSMHPSYYYRAHACIMVFDVTRKATYKNLSDWYGELRQYSESIPCLLIANKIDVDYQVTKKSFKFAQQHDLPFFFVSAADGTNVVKAFDEAVKAGMEFKKNGGDFVDEALSLL 199
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BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: A0A835ZG89_9STRA (RTW, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG89_9STRA)

HSP 1 Score: 313 bits (801), Expect = 1.560e-104
Identity = 150/185 (81.08%), Postives = 166/185 (89.73%), Query Frame = 2 
Query:  260 DEXXLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLDDGAEIKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLL 814
            D   L +PDLKVILLGDSAVGKSKLVERYLMDEY+PRQLSTFALTLFRKNA L+DG    VDFWDTAGQERF+SMHPSYYYRAHACI+VFDVTRKATYKNL +WYGELRQ+CE IPC+LVANKIDVDYNVTKK FKFA QH LPFFFVSAADG NVV+ FEEAI+  +E K++GGDFV++AL+LL
Sbjct:   11 DTDDLGDPDLKVILLGDSAVGKSKLVERYLMDEYSPRQLSTFALTLFRKNAVLEDGTRTTVDFWDTAGQERFTSMHPSYYYRAHACIMVFDVTRKATYKNLVQWYGELRQFCESIPCILVANKIDVDYNVTKKCFKFATQHNLPFFFVSAADGANVVQVFEEAIRLAIEHKRSGGDFVEDALTLL 195
[Close]
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: A0A125SEA6_9STRA (RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A125SEA6_9STRA)

HSP 1 Score: 294 bits (752), Expect = 6.730e-97
Identity = 144/203 (70.94%), Postives = 165/203 (81.28%), Query Frame = 2 
Query:  215 MSERKTEGKDHKEDDDEXX---LEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLDDGAEIKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLL 814
            +SE K EGK   E D+      L +PD K+ILLGDSAVGKSKLVERYLMDEYNPRQLST+ALTL+RK   L++G    +D WDTAGQERF+S+HPSYYY AH CILVFDVTRK TY++LS+WYGELRQYCE IPC+LVANKIDVDY VTKKSFKFA Q+ELPFFFVSAADGTNVVK F EA++ G+ FKKN  DF+ E +  L
Sbjct:    7 LSEGKDEGKTANEGDNNNNGVDLGDPDCKIILLGDSAVGKSKLVERYLMDEYNPRQLSTYALTLYRKTVVLEEGNTYDIDLWDTAGQERFNSLHPSYYYGAHCCILVFDVTRKVTYQHLSDWYGELRQYCESIPCILVANKIDVDYKVTKKSFKFASQYELPFFFVSAADGTNVVKVFHEAVRLGINFKKNNPDFMTEVIEFL 209
[Close]
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: A0A7S2XUJ5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUJ5_9STRA)

HSP 1 Score: 283 bits (723), Expect = 1.930e-92
Identity = 142/217 (65.44%), Postives = 168/217 (77.42%), Query Frame = 2 
Query:  215 MSERKTEGKDHKEDDDEXXLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARL---------DDGAE------IKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLLAD 820
            M+E K EG+D         L +PD KVILLGDSAVGKSKLVERYLM+++NPRQLSTFALTL+RK  +L         DDGA+      + +D WDTAGQERF+SMHPSYYYRAHACILVFDVTRK TY+NLS WY ELR YCE IP +L ANKID++Y VTKKSFKFA QH+LPFFF SAADGTNVV+ FE A+K G+ +K+  GDF+++ALS+L D
Sbjct:    1 MAEEKLEGQDD--------LPDPDCKVILLGDSAVGKSKLVERYLMNDFNPRQLSTFALTLYRKEVQLPEDDGDGGKDDGAKGQGGRTVSIDIWDTAGQERFTSMHPSYYYRAHACILVFDVTRKVTYQNLSTWYSELRNYCENIPVILCANKIDINYEVTKKSFKFASQHQLPFFFASAADGTNVVQIFESAVKMGVHYKETEGDFIEDALSVLGD 209
[Close]
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: A0A8K1CGD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGD5_PYTOL)

HSP 1 Score: 276 bits (707), Expect = 3.310e-90
Identity = 138/195 (70.77%), Postives = 158/195 (81.03%), Query Frame = 2 
Query:  248 KEDDDEXXLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLDD----GAEIKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLLAD 820
            K DDD   L EPD+KVILLGDSAVGKSKLVER++M+E+ PRQLSTFALTLFRK   + D       IKVDFWDTAGQERFSSMHPSYYY A ACI+VFDVTRK TY+NL+ WY ELR+YCE IPC LVANKIDVD NVT K FKF++ H LPF FVSAADGTNVVK F++A+KA  +FKK+GGDF+ + L LL +
Sbjct:    7 KPDDD---LGEPDVKVILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVEIPDEKGKSQVIKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLTGWYKELREYCENIPCFLVANKIDVDLNVTSKKFKFSETHNLPFEFVSAADGTNVVKVFQDAVKAAYQFKKDGGDFMADVLDLLGE 198
[Close]
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: H3GJM6_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3GJM6_PHYRM)

HSP 1 Score: 275 bits (704), Expect = 9.440e-90
Identity = 136/189 (71.96%), Postives = 155/189 (82.01%), Query Frame = 2 
Query:  263 EXXLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLD--DGAE-IKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLLAD 820
            E  L EPD+KVILLGDSAVGKSKLVER++M+EY PRQLSTFALTLFRK   LD  +G   +KVDFWDTAGQERFSSMHPSYYY A ACILVFDVTRK TY+NL+ WY ELR+YCE IPC LVANKIDVD NVT K FKFA+ H L F FVSAADGTNVVK F++A++A  +FK+ GGDF+ + L LL +
Sbjct:   10 EDSLGEPDVKVILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEVELDGENGKRTVKVDFWDTAGQERFSSMHPSYYYGATACILVFDVTRKVTYQNLANWYKELREYCESIPCFLVANKIDVDMNVTNKKFKFAETHNLEFSFVSAADGTNVVKVFKDAVEAAFKFKREGGDFMSDVLDLLGE 198
[Close]
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: T0R548_SAPDV (Rab family, other n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0R548_SAPDV)

HSP 1 Score: 275 bits (703), Expect = 1.340e-89
Identity = 132/184 (71.74%), Postives = 152/184 (82.61%), Query Frame = 2 
Query:  263 EXXLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLDDGAEIKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLL 814
            E  L + DLK+ILLGDSAVGKSKLVER++M+EY PRQLSTFALTLFRK   +DDG+  K+D WDTAGQERFSSMHPSYY+ A ACILVFDVTRK TY++L++WY ELR+YCE +PC L ANKIDVD  VT K FKFA+ H L F FVSAADGTNVVK FEEAI AGL++KK GGDF+ + L LL
Sbjct:   12 EDGLGDADLKIILLGDSAVGKSKLVERFMMNEYQPRQLSTFALTLFRKEFPMDDGSTAKIDIWDTAGQERFSSMHPSYYFGASACILVFDVTRKTTYQHLADWYKELREYCENVPCFLAANKIDVDLEVTNKKFKFAETHNLGFHFVSAADGTNVVKIFEEAIHAGLKYKKEGGDFMADVLDLL 195
[Close]
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: A0A5D6XLH8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLH8_9STRA)

HSP 1 Score: 274 bits (700), Expect = 4.220e-89
Identity = 136/187 (72.73%), Postives = 154/187 (82.35%), Query Frame = 2 
Query:  272 LEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARL--DDG--AEIKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLLAD 820
            L EPD+K+ILLGDSAVGKSKLVER++M+E+ PRQLSTFALTLFRK   L  DDG  A +KVDFWDTAGQERFSSMHPSYYY A ACI+VFDVTRK TY+NL+ WY ELR+YCE IPC LVANKIDVD  VT K FKFA+ H L F FVSAADGTNVVK F +A+KA L+FKK GGDF+ + L LL +
Sbjct:   16 LGEPDVKIILLGDSAVGKSKLVERFMMNEFQPRQLSTFALTLFRKEVELENDDGKKALVKVDFWDTAGQERFSSMHPSYYYGATACIMVFDVTRKVTYQNLANWYQELREYCENIPCFLVANKIDVDLAVTSKKFKFAETHNLEFEFVSAADGTNVVKVFRDAVKAALKFKKEGGDFMADVLDLLGE 202
[Close]
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: A0A1W0A304_9STRA (Ras family GTPase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A304_9STRA)

HSP 1 Score: 280 bits (715), Expect = 1.060e-88
Identity = 134/193 (69.43%), Postives = 158/193 (81.87%), Query Frame = 2 
Query:  263 EXXLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLDDGAEIKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLLADT*RAMYI 841
            E  + + DLK+ILLGDSAVGKSKLVERY+M+E+ PRQLSTFALTLFRK   +DDG+  K+D WDTAGQERFSSMHPSYY+ A ACILVFDVTRK TY++LS+WY ELR+YCE IPC L ANK+DVD  VT K FKFA+ H L F FVSAADGTNVVK FEEAI AGL++KK GGDF+ + L LL +T R +++
Sbjct:   12 EEGMGDADLKIILLGDSAVGKSKLVERYMMNEFQPRQLSTFALTLFRKELPMDDGSVAKIDIWDTAGQERFSSMHPSYYFGATACILVFDVTRKTTYQHLSDWYKELREYCENIPCFLAANKVDVDVEVTNKKFKFAESHNLGFHFVSAADGTNVVKIFEEAIHAGLKYKKEGGDFMSDVLDLLNETPRNIHL 204
[Close]
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Match: A0A2D4BD48_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD48_PYTIN)

HSP 1 Score: 273 bits (697), Expect = 1.120e-88
Identity = 136/198 (68.69%), Postives = 156/198 (78.79%), Query Frame = 2 
Query:  242 DHKEDDDEXXLEEPDLKVILLGDSAVGKSKLVERYLMDEYNPRQLSTFALTLFRKNARLDDGAE----IKVDFWDTAGQERFSSMHPSYYYRAHACILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSFKFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLLADT 823
            D K +  +  L EPD+KVILLGDSAVGKSKLVER++MDE+ PRQLSTFALTLFRK   L+D       +KVDFWDTAGQERFSSMHPSYYY AHACILVFDVTRK TY+NL+ WY ELR+YCE IPC LVANKIDVD  VT K FKFA+ H L F FVSAADGTNVVK F++A+ A  +FK +GGDF+   L LL ++
Sbjct:    4 DAKRETPDDDLGEPDVKVILLGDSAVGKSKLVERFMMDEFQPRQLSTFALTLFRKEVELEDERGKPQIVKVDFWDTAGQERFSSMHPSYYYGAHACILVFDVTRKTTYQNLANWYKELREYCENIPCFLVANKIDVDLAVTNKKFKFAETHNLEFEFVSAADGTNVVKLFKQAVAAACKFKADGGDFMATVLDLLGES 201
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig106.575.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G647_ECTSI8.400e-12791.00RTW, Ras superfamily GTPase n=2 Tax=Ectocarpus Tax... [more]
A0A835ZG89_9STRA1.560e-10481.08RTW, ras superfamily GTPase n=1 Tax=Tribonema minu... [more]
A0A125SEA6_9STRA6.730e-9770.94RABL2 n=1 Tax=Trachydiscus minutus TaxID=1032745 R... [more]
A0A7S2XUJ5_9STRA1.930e-9265.44Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1CGD5_PYTOL3.310e-9070.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3GJM6_PHYRM9.440e-9071.96Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
T0R548_SAPDV1.340e-8971.74Rab family, other n=2 Tax=Saprolegniaceae TaxID=47... [more]
A0A5D6XLH8_9STRA4.220e-8972.73Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1W0A304_9STRA1.060e-8869.43Ras family GTPase n=1 Tax=Thraustotheca clavata Ta... [more]
A0A2D4BD48_PYTIN1.120e-8868.69Rab family, other n=1 Tax=Pythium insidiosum TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig106contigL-elsbetiae_contig106:22634..24766 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.9
Seed ortholog evalue9.8e-101
Seed eggNOG ortholog2880.D7G647
Preferred nameRABL2B
KEGG koko:K07883,ko:K07931,ko:K07976,ko:K17977
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000131,GO:0000166,GO:0000242,GO:0000902,GO:0000904,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005813,GO:0005814,GO:0005815,GO:0005856,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0006810,GO:0006928,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007029,GO:0007030,GO:0007275,GO:0007338,GO:0007399,GO:0008150,GO:0008594,GO:0009566,GO:0009653,GO:0009987,GO:0010256,GO:0010970,GO:0012505,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019953,GO:0022008,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030317,GO:0030427,GO:0030705,GO:0030990,GO:0030992,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032989,GO:0032991,GO:0035639,GO:0036064,GO:0036094,GO:0036126,GO:0040011,GO:0042073,GO:0042461,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0046530,GO:0046907,GO:0048308,GO:0048309,GO:0048311,GO:0048313,GO:0048468,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0060271,GO:0070925,GO:0071840,GO:0097159,GO:0097223,GO:0097225,GO:0097367,GO:0097722,GO:0097729,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901265,GO:1901363
EggNOG free text desc.GTP binding
EggNOG OGsCOG1100@1,KOG0087@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029,ko04031,ko04131
Ec32 ortholog descriptionRTW, Ras superfamily GTPase
Ec32 orthologEc-11_005150.1
Exons4
Model size969
Cds size612
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig106.575.1prot_L-elsbetiae_contig106.575.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig106 22848..24623 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815281.3453913-UTR-L-elsbetiae_contig106:22633..228471622815281.3453913-UTR-L-elsbetiae_contig106:22633..22847Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig106 22634..22847 +
1691682814.5787244-UTR-L-elsbetiae_contig106:22633..228471691682814.5787244-UTR-L-elsbetiae_contig106:22633..22847Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig106 22634..22847 +
1622815281.4104166-UTR-L-elsbetiae_contig106:24623..247661622815281.4104166-UTR-L-elsbetiae_contig106:24623..24766Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig106 24624..24766 +
1691682814.6291978-UTR-L-elsbetiae_contig106:24623..247661691682814.6291978-UTR-L-elsbetiae_contig106:24623..24766Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig106 24624..24766 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815281.3628283-CDS-L-elsbetiae_contig106:22847..229251622815281.3628283-CDS-L-elsbetiae_contig106:22847..22925Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig106 22848..22925 +
1691682814.5924375-CDS-L-elsbetiae_contig106:22847..229251691682814.5924375-CDS-L-elsbetiae_contig106:22847..22925Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig106 22848..22925 +
1622815281.3742418-CDS-L-elsbetiae_contig106:23383..235341622815281.3742418-CDS-L-elsbetiae_contig106:23383..23534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig106 23384..23534 +
1691682814.6031158-CDS-L-elsbetiae_contig106:23383..235341691682814.6031158-CDS-L-elsbetiae_contig106:23383..23534Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig106 23384..23534 +
1622815281.3847506-CDS-L-elsbetiae_contig106:23751..239541622815281.3847506-CDS-L-elsbetiae_contig106:23751..23954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig106 23752..23954 +
1691682814.6121173-CDS-L-elsbetiae_contig106:23751..239541691682814.6121173-CDS-L-elsbetiae_contig106:23751..23954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig106 23752..23954 +
1622815281.39564-CDS-L-elsbetiae_contig106:24443..246231622815281.39564-CDS-L-elsbetiae_contig106:24443..24623Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig106 24444..24623 +
1691682814.620594-CDS-L-elsbetiae_contig106:24443..246231691682814.620594-CDS-L-elsbetiae_contig106:24443..24623Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig106 24444..24623 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig106.575.1

>prot_L-elsbetiae_contig106.575.1 ID=prot_L-elsbetiae_contig106.575.1|Name=mRNA_L-elsbetiae_contig106.575.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp
MSERKTEGKDHKEDDDEEDLEEPDLKVILLGDSAVGKSKLVERYLMDEYN
PRQLSTFALTLFRKNARLDDGAEIKVDFWDTAGQERFSSMHPSYYYRAHA
CILVFDVTRKATYKNLSEWYGELRQYCEGIPCLLVANKIDVDYNVTKKSF
KFAQQHELPFFFVSAADGTNVVKAFEEAIKAGLEFKKNGGDFVDEALSLL
ADT*
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mRNA from alignment at L-elsbetiae_contig106:22634..24766+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig106.575.1 ID=mRNA_L-elsbetiae_contig106.575.1|Name=mRNA_L-elsbetiae_contig106.575.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2133bp|location=Sequence derived from alignment at L-elsbetiae_contig106:22634..24766+ (Laminarionema elsbetiae ELsaHSoW15)
GGGAGAGAGAGAGGGTCTGTGTGTACGTGATTGGCTGTCTTGCAACGGAC
TCTACCGTTATTTTGGGTGGAGAGCTTGAAAATCTATCGCGCTGCTCCAG
AAGAAGTGAAACAGCAGGACATTTTCCCCCGCCAGACAGAGTGCTCGTAT
CTTTCGCCTTTGCCGGGGATATAAAGAAGAGGGAGAGAGGGATCCACGAT
AGACACGAGACAATATGTCCGAACGCAAGACAGAGGGCAAGGATCACAAA
GAAGATGACGACGAAGAAGACCTCGAAGAACCGGATCTGAAGGTGAAGGG
ACAAAGGAGAAGGATGGAATGAGGTTATGTAGGTCATCCCCCTATCAGAG
AGGTGCGATCCAGCTAAATCCGCTAAACACGGCCTCGCTGCCGGGTGTGT
GTATGTCGGCGCATGCGTATGATATGGCTAGGCCAAGGCTGGTACCGGTA
GTGGTTGGTGGTTAGAGGCGATGAAGTGCCGTGCGCGTGATGGTGTTGCC
AAATGCAAAATACTACCTTTCTTTCGTTCGGAGGGCGTGTTTTCTTCCGC
AACATGGGATCCGCGGTCGGTCGGTACTGCAAGCGCTGCATTTGGAACGT
GAGCTTCAAAGAGCATGCTTTTGTTATTGTCGCTGTTTCTTTTAACGATA
TTCTCCTCCATGTCCCCGCCCCTACCGTAATTCCGGCCACACATTGCATC
CAATCATATGGATTATTGTACCCCGAAATGATGCTTCGTGCTAAAATAAG
GTAATCCTTTTGGGCGACTCCGCTGTGGGCAAGTCCAAGCTGGTGGAGCG
GTACTTGATGGACGAATACAACCCGCGACAACTTTCCACGTTCGCCCTGA
CGCTGTTCCGGAAGAATGCTAGACTCGATGACGGTGCAGAAATTAAAGTA
GGTGCGACAACAAGCCACGTGTTCGTTTCAGCAGGAGGAGGAGGAAAGCG
TGTCTATCTAGTACTCTAGTCTATGCATCCGGTATCCACTACTGTAAATG
TAGAACTGACGATGTATCAGTCAGCAACAATGCGTTGTCGCCCCTTTCCC
CACAATGACAAGTATCGAACGGCACATACGAATAACGATGTATTTATTGG
CGGGGGTGGCGGTTACAGATTTCTGGGACACAGCGGGGCAGGAGCGCTTC
AGCAGCATGCACCCTTCGTACTACTACCGGGCGCACGCGTGCATTTTAGT
TTTTGACGTCACGCGAAAAGCGACTTACAAGAACCTATCGGAGTGGTACG
GAGAGCTGCGGCAGTACTGTGAGGGCATTCCATGTCTGCTCGTGGCTAAC
AAGATCGATGTGGACTACAATGTGAGCGATCTACGGGAGGAAGGGGGAGG
TGTAAGGGCAGGGAAGAGTGGCTGCTCTATTCGTCTGCTACATAGTCTAC
ACATCGGCGTACTTCGTATGATCTATTTATGTAGACTAAGCCAGGAAACA
GTTCGGTTCATTTTCCACGCCCACCTGTGGAGCGCATCTTTAATCCATAA
GACCCAGCAAAAGGTTTTGCCGTTCCAGGCTTTTGCTGTGATCGATGAAC
CAACAGGCTCATTTGAAAGATCACGGGGGAGTGGGGGAGTACATACATAT
AGTCTAAGTCATAGTCTACACAGATAAGTCAGTAGATCTCAAGTTACGAG
TTTGTCTTGAGGAATAGTGGAGTCTGGGCAACCCGTTTGACTTGTTGTTC
AGTTGCCTCCCCCCCCCTGACGATTCCCTACCCACTCAATATCTATGTAG
TTGTGCACCTTTCGGTTCCACCGCAACTCACTCCATGCACACGAACTTAT
GTATGTACAGGTAACCAAGAAAAGCTTCAAGTTCGCGCAGCAGCACGAGC
TTCCTTTCTTTTTTGTGTCCGCCGCGGACGGGACGAACGTGGTGAAGGCC
TTCGAGGAGGCAATCAAGGCCGGGCTGGAGTTCAAGAAGAACGGCGGCGA
CTTCGTGGACGAGGCCTTGTCTCTCTTGGCGGACACATAGAGAGCTATGT
ACATAATCTAGGTAGATAGGTACACAGCTCACGACCAGAGTTTACGCAGT
GAATATGTGCATGTCCAGTGAGTGGTTGCTTGTGCTTATGGATGGTCTCT
CGCTCCGGCTATTTACTATTGATCTATTTATCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig106:22634..24766+

>mRNA_L-elsbetiae_contig106.575.1 ID=mRNA_L-elsbetiae_contig106.575.1|Name=mRNA_L-elsbetiae_contig106.575.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig106:22634..24766+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGAACGCAAGACAGAGGGCAAGGATCACAAAGAAGATGACGACGA
AGAAGACCTCGAAGAACCGGATCTGAAGATGTCCGAACGCAAGACAGAGG
GCAAGGATCACAAAGAAGATGACGACGAAGAAGACCTCGAAGAACCGGAT
CTGAAGGTAATCCTTTTGGGCGACTCCGCTGTGGGCAAGTCCAAGCTGGT
GGAGCGGTACTTGATGGACGAATACAACCCGCGACAACTTTCCACGTTCG
CCCTGACGCTGTTCCGGAAGAATGCTAGACTCGATGACGGTGCAGAAATT
AAAGTAGGTAATCCTTTTGGGCGACTCCGCTGTGGGCAAGTCCAAGCTGG
TGGAGCGGTACTTGATGGACGAATACAACCCGCGACAACTTTCCACGTTC
GCCCTGACGCTGTTCCGGAAGAATGCTAGACTCGATGACGGTGCAGAAAT
TAAAGTAGATTTCTGGGACACAGCGGGGCAGGAGCGCTTCAGCAGCATGC
ACCCTTCGTACTACTACCGGGCGCACGCGTGCATTTTAGTTTTTGACGTC
ACGCGAAAAGCGACTTACAAGAACCTATCGGAGTGGTACGGAGAGCTGCG
GCAGTACTGTGAGGGCATTCCATGTCTGCTCGTGGCTAACAAGATCGATG
TGGACTACAATATTTCTGGGACACAGCGGGGCAGGAGCGCTTCAGCAGCA
TGCACCCTTCGTACTACTACCGGGCGCACGCGTGCATTTTAGTTTTTGAC
GTCACGCGAAAAGCGACTTACAAGAACCTATCGGAGTGGTACGGAGAGCT
GCGGCAGTACTGTGAGGGCATTCCATGTCTGCTCGTGGCTAACAAGATCG
ATGTGGACTACAATGTAACCAAGAAAAGCTTCAAGTTCGCGCAGCAGCAC
GAGCTTCCTTTCTTTTTTGTGTCCGCCGCGGACGGGACGAACGTGGTGAA
GGCCTTCGAGGAGGCAATCAAGGCCGGGCTGGAGTTCAAGAAGAACGGCG
GCGACTTCGTGGACGAGGCCTTGTCTCTCTTGGCGGACACATAGGTAACC
AAGAAAAGCTTCAAGTTCGCGCAGCAGCACGAGCTTCCTTTCTTTTTTGT
GTCCGCCGCGGACGGGACGAACGTGGTGAAGGCCTTCGAGGAGGCAATCA
AGGCCGGGCTGGAGTTCAAGAAGAACGGCGGCGACTTCGTGGACGAGGCC
TTGTCTCTCTTGGCGGACACATAG
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