mRNA_L-elsbetiae_contig10590.565.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: A0A6H5JZ18_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ18_9PHAE) HSP 1 Score: 142 bits (357), Expect = 9.030e-38 Identity = 67/74 (90.54%), Postives = 74/74 (100.00%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVDISTNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 222 LN+ARDIREQLEGLCERVEV+IS+NPTEMEGIAK++T+GFFYNT+KMSKSGDYKTIKNQHTVYIHPSSVLHKQE Sbjct: 568 LNRARDIREQLEGLCERVEVEISSNPTEMEGIAKSVTSGFFYNTAKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 641
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: D8LHZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ7_ECTSI) HSP 1 Score: 142 bits (358), Expect = 9.590e-38 Identity = 68/74 (91.89%), Postives = 74/74 (100.00%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVDISTNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 222 LN+ARDIREQLEGLCERVEV+IS+NPTEMEGIAKA+T+GFFYNT+KMSKSGDYKTIKNQHTVYIHPSSVLHKQE Sbjct: 988 LNRARDIREQLEGLCERVEVEISSNPTEMEGIAKAMTSGFFYNTAKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 1061
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: A0A835YTF2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF2_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.700e-28 Identity = 51/72 (70.83%), Postives = 69/72 (95.83%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVDISTNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHK 216 LN+ARDIREQLEGLCERVE+++++NP +++ IAKAIT+G+FY+T+K+S+SGDY+T+K+QHTVYIHPSSVL K Sbjct: 960 LNRARDIREQLEGLCERVEIEMTSNPGDIDAIAKAITSGYFYHTAKLSRSGDYRTVKHQHTVYIHPSSVLAK 1031
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: K0R9P7_THAOC (OB_NTP_bind domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9P7_THAOC) HSP 1 Score: 106 bits (265), Expect = 4.740e-28 Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVDIS-TNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 222 + KARD+REQLEGLCERVEVD + ++P ++E I KAITAGFFYNT+++ KSGDY+T+K + TVYIHPSSVL K+E Sbjct: 1 MKKARDVREQLEGLCERVEVDPTVSSPEDIESILKAITAGFFYNTARLGKSGDYETVKQRRTVYIHPSSVLAKEE 75
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: A0A6U0WST0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WST0_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.380e-27 Identity = 49/74 (66.22%), Postives = 65/74 (87.84%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVDISTNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 222 +N+ARD+ EQLEGLCERVE+++++NP ++E I KA+ AGFFYNTSK+SKSG+YKT+K QHTVYIHPSS + + E Sbjct: 853 MNRARDVYEQLEGLCERVEIEMTSNPNDVENICKAVAAGFFYNTSKLSKSGEYKTVKQQHTVYIHPSSCMARLE 926
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: A0A7S1CH39_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH39_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.420e-26 Identity = 47/74 (63.51%), Postives = 62/74 (83.78%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVDISTNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 222 + +ARDIREQLEGLCERVE+ S++P + + +AKA+TAGFFYNT+K+ K+G YKT+KN HTV +HPSS L K+E Sbjct: 33 MRRARDIREQLEGLCERVEIPPSSSPHDHDVVAKALTAGFFYNTAKLQKNGTYKTVKNAHTVAVHPSSALFKEE 106
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: A0A6T5W0Z3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A6T5W0Z3_9STRA) HSP 1 Score: 104 bits (259), Expect = 6.940e-26 Identity = 47/74 (63.51%), Postives = 62/74 (83.78%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVDISTNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 222 +NKARDIREQLEGLCERVE+D+ + +++ I K +T+G+FY+T+K++ DYKTIKNQHTVYIHPSSVL K + Sbjct: 135 MNKARDIREQLEGLCERVEIDLVSKSPDIDMICKGLTSGYFYHTAKLTAGNDYKTIKNQHTVYIHPSSVLIKDD 208
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: A0A7S0PHI1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PHI1_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.200e-25 Identity = 51/75 (68.00%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVD-ISTNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 222 + KARDIR+QLEGLCERVEVD + ++P + + I K +TAGFFYNT+KM KSGDY TIK + TVYIHPSSVL K+E Sbjct: 250 MRKARDIRDQLEGLCERVEVDHVVSSPDDQDSILKCVTAGFFYNTAKMGKSGDYTTIKQKKTVYIHPSSVLSKEE 324
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: A0A7S0PU62_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PU62_9STRA) HSP 1 Score: 103 bits (256), Expect = 3.720e-25 Identity = 48/75 (64.00%), Postives = 63/75 (84.00%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVD-ISTNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 222 + KARDIREQLEGLCERVE+D ++ P + + + K+ITAGFFYNT+K+ +SGDY+T+K + TVYIHPSSVL K+E Sbjct: 150 IKKARDIREQLEGLCERVEIDQTASKPDDTDAVLKSITAGFFYNTAKLGRSGDYQTVKQRKTVYIHPSSVLAKEE 224
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Match: A0A7S0PIS7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PIS7_9STRA) HSP 1 Score: 105 bits (262), Expect = 7.340e-25 Identity = 51/75 (68.00%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 1 LNKARDIREQLEGLCERVEVD-ISTNPTEMEGIAKAITAGFFYNTSKMSKSGDYKTIKNQHTVYIHPSSVLHKQE 222 + KARDIR+QLEGLCERVEVD + ++P + + I K +TAGFFYNT+KM KSGDY TIK + TVYIHPSSVL K+E Sbjct: 425 MRKARDIRDQLEGLCERVEVDHVVSSPDDQDSILKCVTAGFFYNTAKMGKSGDYTTIKQKKTVYIHPSSVLSKEE 499 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10590.565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10590.565.1 >prot_L-elsbetiae_contig10590.565.1 ID=prot_L-elsbetiae_contig10590.565.1|Name=mRNA_L-elsbetiae_contig10590.565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=74bp LNKARDIREQLEGLCERVEVDISTNPTEMEGIAKAITAGFFYNTSKMSKSback to top mRNA from alignment at L-elsbetiae_contig10590:4923..5607+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10590.565.1 ID=mRNA_L-elsbetiae_contig10590.565.1|Name=mRNA_L-elsbetiae_contig10590.565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=685bp|location=Sequence derived from alignment at L-elsbetiae_contig10590:4923..5607+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10590:4923..5607+ >mRNA_L-elsbetiae_contig10590.565.1 ID=mRNA_L-elsbetiae_contig10590.565.1|Name=mRNA_L-elsbetiae_contig10590.565.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=444bp|location=Sequence derived from alignment at L-elsbetiae_contig10590:4923..5607+ (Laminarionema elsbetiae ELsaHSoW15)back to top |