mRNA_L-elsbetiae_contig1056.546.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: D8LEQ8_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ8_ECTSI) HSP 1 Score: 340 bits (872), Expect = 1.530e-108 Identity = 151/175 (86.29%), Postives = 162/175 (92.57%), Query Frame = 1 Query: 1 ANSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGLAWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGTTALGRGGFRPYPDYPYFLSDMWFFNRSSGHWSEISPTSPTGPTPRMNHALVMVDRLLVVFG 525 ANSWSS+AEYP+GGYLQDLWVYTK+QL EDEQVPT+SS YGNWT+ A KE CVADPGLAWE+RNDISC+IRWPQGRAGHAAVWDE+RGGMWLHGGYTTFFPYISS GAGSDYGTTALGRGGFRPYPDYPYFLSDMWFFN SSG W EI+ TSPT PTPRMNH +VMVD +LVVFG Sbjct: 318 ANSWSSFAEYPEGGYLQDLWVYTKKQLAEDEQVPTDSSAYGNWTKIAPKESCVADPGLAWEERNDISCDIRWPQGRAGHAAVWDEDRGGMWLHGGYTTFFPYISSDGAGSDYGTTALGRGGFRPYPDYPYFLSDMWFFNTSSGQWGEITATSPTQPTPRMNHMMVMVDHILVVFG 492
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: A0A835Z8A8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A8_9STRA) HSP 1 Score: 219 bits (557), Expect = 6.450e-63 Identity = 98/175 (56.00%), Postives = 124/175 (70.86%), Query Frame = 1 Query: 4 NSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGLAWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGT-TALGRGGFRPYPDYPYFLSDMWFFNRSSGHWSEISPTSPTGPTPRMNHALVMVDRLLVVFG 525 N W+S A P GGYL DLW+YTKRQ+ E VPT+SS YGN+T+ A + CV +PG AW DR+D++C + WP RAGH VWD ER G+W+HGGYTT+FPYI + GAGS G T G FRPYPD+P+FLSD+WF++ SSG WS+I P S P RM+H++V V LV+ G Sbjct: 282 NDWNSTALLPAGGYLSDLWIYTKRQVRPGEPVPTDSSDYGNFTRAAELQDCVVEPGEAWADRSDVTCSLAWPSPRAGHQMVWDAERQGLWVHGGYTTYFPYIDTNGAGSGLGVGTKEGLSEFRPYPDHPFFLSDLWFYDLSSGRWSQIQPAS-VAPPARMDHSMVKVADALVIMG 455
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: A0A7S2FV69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FV69_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.910e-52 Identity = 79/179 (44.13%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 1 ANSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGLAWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGTTA----LGRGGFRPYPDYPYFLSDMWFFNRSSGHWSEISPTSPTGPTPRMNHALVMVDRLLVVFG 525 AN WS YP+GGYL DLWVY KR L E E++P S G+G WT+ K C A PG + R + +C I WP RAGH D +WLHGGYTT+FPY+++ G G G T+ G GF PY YP+FL D+W++NR+ +W++++P S + P R++H+L++ +L +FG Sbjct: 20 ANDWSKVDTYPEGGYLDDLWVYEKRLLDEREEIPDESYGFGAWTKLTPKSRCFASPGDTYAARGEETCSIDWPGPRAGHVMFLDLTNDIVWLHGGYTTYFPYMNTKGPGYGDGVTSGDITKGGAGFVPYGTYPFFLDDLWYYNRTDSYWTKVTPLSDSVPPARVDHSLIISGHMLFIFG 198
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: A0A7S4E630_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E630_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.440e-50 Identity = 79/166 (47.59%), Postives = 109/166 (65.66%), Query Frame = 1 Query: 4 NSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGLAWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGTTALGRG-GFRPYPDYPYFLSDMWFFNRSSGHWSEISPTSPTGPTPRMNHALVM 498 N W S E P GGY+ DLWVY KR L DE +PT+S+G G W K CV +PG WE R+D +CE+ WP RAGH + D + GG+++ GGYTTFFPY+S+ G GS +G A GF P+PDYPY+L+D+W +N ++G+W+ + P S P PR + ++V+ Sbjct: 359 NRWRSNEELPDGGYMDDLWVYNKRLLNPDEPMPTSSAGLGLWRNYTGKATCVDEPGATWEGRDDQNCEVEWPTARAGHTSALDAKNGGVYVFGGYTTFFPYLSTDGPGSGWGAAAKPNAKGFIPFPDYPYYLNDLWVYNLTTGYWTLLVPLSSDVPAPRTDMSMVL 524
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: A0A482V440_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V440_9ARCH) HSP 1 Score: 156 bits (395), Expect = 1.450e-44 Identity = 71/177 (40.11%), Postives = 105/177 (59.32%), Query Frame = 1 Query: 4 NSWSSYAEYPKGGYLQDLWVYTKR--QLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGLAWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGTTALGRGGFRPYPDYPYFLSDMWFFNRSSGHWSEIS-PTSPTGPTPRMNHALVMVDRLLVVFG 525 N+WS+Y P+GGYL DLW+YTK E TN+ G W KE C PG++W+ RN ISC P RAGH + +D+ R +W+ GGY+ ++PY+S+ G GS G T++G GGF PYP + YF +D+W++N SS W ++ P P PRM+ +++ ++ + G Sbjct: 39 NNWSNYTTRPRGGYLDDLWIYTKYLDYSNPGEGYKTNN---GLWQLKTAKEQCFPSPGISWDTRNQISCTTIAPTSRAGHGSAFDDSRDIVWIFGGYSIYYPYLSTDGIGSGPGPTSVGSGGFVPYPGFDYFRNDLWYYNLSSSLWIQVEIPEDSPKPDPRMDMIFLLLGDVIFMHG 212
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: A0A7S3K479_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K479_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.350e-43 Identity = 80/184 (43.48%), Postives = 105/184 (57.07%), Query Frame = 1 Query: 4 NSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGLAWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGTTAL--GRGGFRPYPDYPYFLSDMWFFNRSSGHWSEI-----SPTSPTG---PTPRMNHALVMVDRLLVVFG 525 N WSS A PKGGY+ D W Y KR L E VPT S+ GNWT+ + C G W +R+ C WP RAGH A D G+WL GGY T+FPYI++ G G D G A G GF PYPDY YFL+D+WF+N +SG W+++ S + G P PR + ++++ +L+ FG Sbjct: 276 NRWSSNALMPKGGYMNDFWKYKKRLLDPFEPVPTISNDIGNWTKLQPQTICSIISGDTWAERDATHCSADWPSERAGHVAALDTYSQGIWLFGGYRTYFPYIATDGPGVDIGVVAATSGGSGFTPYPDYGYFLNDLWFYNLTSGFWTQVFDGGSSQENSQGSNYPVPRSDLSMILSGHILIFFG 459
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: A0A7S2LC70_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LC70_9STRA) HSP 1 Score: 142 bits (357), Expect = 6.240e-39 Identity = 68/175 (38.86%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 4 NSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGLAWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGTTALGRGGFRPY-PDYPYFLSDMWFFNRSSGHWSEISPTSPTGPTPRMNHALVMVDRLLVVFG 525 N W + PKGGYL DLW+Y+ G+WT +E CV PGL WE RND C++ WP R GHAAV+D R G+W+HGGY+T+FPY ++ GS++G LG P Y ++L D+WF++ +SG W E + P R +H L + L++ G Sbjct: 43 NRWENSELLPKGGYLDDLWMYSN----------------GSWTNVEGQETCVHAPGLTWESRNDQRCDLIWPGARFGHAAVYDASRDGIWIHGGYSTYFPYPTNKDTGSNFGVDKLGTNHISATSPTYQFYLDDLWFYSINSGLW-EKKRIFGSKPRRRQDHVLALAGNTLILHG 200
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: B8CAG0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAG0_THAPS) HSP 1 Score: 146 bits (368), Expect = 4.130e-37 Identity = 71/175 (40.57%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 4 NSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGLAWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGT-TALGRGGFRPYPDYPYFLSDMWFFNRSSGHWSEISPTSPTGPTPRMNHALVMVDRLLVVFG 525 N W S P+GGYL DLWV++ NS+ W++ KE CV PGL W+ RND C++ WP+ R+GH+AV+D ER G W+HGGY T++PY +S +GS +G T LGR +P Y ++L D+WF++ SG+W E T + P R +H + LL++ G Sbjct: 312 NRWQSRELLPEGGYLNDLWVFS------------NST----WSKVEGKETCVDAPGLTWQSRNDEHCQVYWPKARSGHSAVFDSERNGFWIHGGYATYYPYPTSKDSGSGFGVNTLLGREHTAIHPTYQFYLDDLWFYDIESGYW-EKKRTFGSKPHRRTDHVISKSGNLLILHG 469
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: A0A6A3M1I0_9STRA (EGF-like domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3M1I0_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.350e-35 Identity = 70/177 (39.55%), Postives = 102/177 (57.63%), Query Frame = 1 Query: 4 NSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGL---AWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGTTALGRGGFRPYPDYPYFLSDMWFFNRSSGHWSEISPTSPTGPTPRMNHALVMVDRLLVVFG 525 N WS +++P GGYL DLWVY K TNS W+ C +DP + A + ++ C + WP GRAGH +V + +++HGGY TFFPY ++ AG+ GT + GF PYP +PY+LSDMW +N S+G WS++ S P PR++H+LV + + ++FG Sbjct: 236 NDWSDVSQFPLGGYLNDLWVYDK---------VTNS-----WSNITETVECPSDPKILADALLNEIEVECVVTWPSGRAGHTSVVFDNA--IFIHGGYRTFFPYPTTTSAGAGRGTLTIREAGFTPYPTHPYYLSDMWKYNLSTGVWSQVVADSVAIPEPRIDHSLVAANDVFLLFG 396
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Match: A0A6G0XDU2_9STRA (EGF-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDU2_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.420e-35 Identity = 70/175 (40.00%), Postives = 97/175 (55.43%), Query Frame = 1 Query: 1 ANSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEFCVADPGLAWEDRNDISCEIRWPQGRAGHAAVWDEERGGMWLHGGYTTFFPYISSAGAGSDYGTTALGRGGFRPYPDYPYFLSDMWFFNRSSGHWSEISPTSPTGPTPRMNHALVMVDRLLVVFG 525 AN WS + YP+GGYL DLW Y +WTQ C A + SC + WP GRAGHA+V ++ G+++HGGY TFFPY +++GAG+ G G+ P+P PY+LSD+W FN ++G W EISP T P PR H+++ D++ V+FG Sbjct: 232 ANQWSDTSVYPEGGYLDDLWQY--------------HIANASWTQLPKMPSCSA---------TEASCSMDWPPGRAGHASVIFQD--GLYIHGGYQTFFPYPTTSGAGAGRGVMPGSPPGYTPFPTNPYYLSDLWLFNITTGLWEEISPRFGTMPGPRAEHSMIAADKVFVLFG 381 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1056.546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1056.546.1 >prot_L-elsbetiae_contig1056.546.1 ID=prot_L-elsbetiae_contig1056.546.1|Name=mRNA_L-elsbetiae_contig1056.546.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=198bp ANSWSSYAEYPKGGYLQDLWVYTKRQLGEDEQVPTNSSGYGNWTQPAVKEback to top mRNA from alignment at L-elsbetiae_contig1056:7536..10967+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1056.546.1 ID=mRNA_L-elsbetiae_contig1056.546.1|Name=mRNA_L-elsbetiae_contig1056.546.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3432bp|location=Sequence derived from alignment at L-elsbetiae_contig1056:7536..10967+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1056:7536..10967+ >mRNA_L-elsbetiae_contig1056.546.1 ID=mRNA_L-elsbetiae_contig1056.546.1|Name=mRNA_L-elsbetiae_contig1056.546.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1188bp|location=Sequence derived from alignment at L-elsbetiae_contig1056:7536..10967+ (Laminarionema elsbetiae ELsaHSoW15)back to top |