mRNA_L-elsbetiae_contig1029.333.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: D8LLL8_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLL8_ECTSI) HSP 1 Score: 540 bits (1390), Expect = 4.370e-183 Identity = 253/334 (75.75%), Postives = 290/334 (86.83%), Query Frame = 1 Query: 1 GKLEDGSDRCFVDGKGSQRCYPTVFFFGTSKCGTTSLARWLDHHPSTRWVSNPRRPDL--DNGVKEAHVFDDYPKGGRVTEQGLLHDKLKITSPKANADDVVIEYTPHYMAVAETPHRIYDMYGGQDSGLKFIVTLREPASRAISSWEFKNEFNPKKGHNDESRTLAKTVMDGRQRSAKLHSCISQAKLSAIKQRDRDLKLCNPRKFLESPLFVSHVGKSMYALQLERWFDLFGRENFKVVFMDDMASDPVGVLRDVVAFLGLEFTSDDESKGLPDLQQWNKITGMAYNKTKSKKKDELGDQVTDDVKSELRAFFKPHNEALEKLLGMPLPDSW 996 GKL DG +RCFV +G RCYPTVFFFGTSKCGTTSLARWLDHHP+T WV+NPRRP + GVKEAHVFDD PKG E+G+ H+KL IT+PK+ A+DVVI+YTPHY+AVAETPHRI D+YGG++SGLKFIVTLREPA RAISSWEFKNE+NPKKG +ESR+LAKT+ DG +R+ KLH+C++ AK A+ RDRDLKLCNPRKFLE PL+VSHVGKSMYALQLERWFDLFGRENFKVVF DDMA DPVGVL DV+ FLGLE TS+DESKGLPD++ W KITGMAYNKTKSKKKDELGDQVTD+VK LR FF+PHNEALE++LG PLP++W Sbjct: 150 GKLRDGRNRCFVGAEGDHRCYPTVFFFGTSKCGTTSLARWLDHHPATHWVANPRRPHQIEETGVKEAHVFDDPPKGDPAFEEGMHHEKLFITTPKSGAEDVVIDYTPHYIAVAETPHRIADIYGGRESGLKFIVTLREPAGRAISSWEFKNEYNPKKGRREESRSLAKTIEDGGRRAMKLHACLALAKSKAVSPRDRDLKLCNPRKFLEVPLYVSHVGKSMYALQLERWFDLFGRENFKVVFTDDMAVDPVGVLEDVLHFLGLELTSEDESKGLPDMKGWKKITGMAYNKTKSKKKDELGDQVTDEVKEGLRKFFEPHNEALEEILGQPLPEAW 483
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: A0A6H5JZE4_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE4_9PHAE) HSP 1 Score: 273 bits (698), Expect = 2.500e-80 Identity = 148/341 (43.40%), Postives = 202/341 (59.24%), Query Frame = 1 Query: 25 RCFV-DGKGSQRCYPTVFFFGTSKCGTTSLARWLDHHPSTRWVSNPRRPDLDNGVKEAHVFDDYPKGGRVTEQGLLHDKLKITSPKANADDVVIEYTPHYMAVAETPHRIYDMYG--GQDSGLKFIVTLREPASRAISSWEFKNEFNP-KKGH----NDESRTLAKTVMDGRQRSAKLHSCIS--------QAKLSAIKQRDRDLKLCNPRKFLESPLFVSHVGKSMYALQLERWFDLFGRENFKVVFMDDMASDPVGVLRDVVAFLGLEFTSDDES-KGLPDLQQWNKITGMAYNKTKSKKKDELGDQVTDDVKSELRAFFKPHNEALEKLLGMPLPDSW 996 RCFV +G+ S RC+ V+FFG SKCGTTSLA W+ HP+ +WVSN G EAHV + ++ +T+P D VI+YTPHY +AE P+RI DMYG D +K+I LREP +R ISSWEFK + +KG + E R+L + +GR+ + L C+S + + + + DL++CNP FLE +F SHVGKS+Y+LQLERW DLFGREN KVVF+++MA DP+G + V FLG++ + E KGL +W +I +N T +KK L +QVT ++ +R FF P N LE+LLG PLPD+W Sbjct: 110 RCFVLEGEDSSRCHANVYFFGVSKCGTTSLAHWMARHPALQWVSNTCHTQHKQGG-EAHVME-------MSTIKNSESTYALTAPMTAQTDKVIDYTPHYSILAEVPYRIKDMYGKTSYDGTVKYIAVLREPVARTISSWEFKYDLRGIEKGEAVNPSSERRSLEEAFSEGREHALSLVKCLSDKENDLRNEIRYPGALKLNIDLQMCNPHAFLEHNMFFSHVGKSIYSLQLERWLDLFGRENVKVVFLEEMAVDPMGTIASVFDFLGVDLLDEKEGVKGLRSRTEWEEIVRTKHNLTNQRKKKILDEQVTPEILQSMRDFFAPFNTQLEELLGRPLPDNW 442
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: D7FHD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD4_ECTSI) HSP 1 Score: 259 bits (663), Expect = 3.040e-73 Identity = 154/403 (38.21%), Postives = 207/403 (51.36%), Query Frame = 1 Query: 7 LEDGSDRCFVDGKGSQRCYPTVFFFGTSKCGTTSLARWLDHHPSTRWVSNPRRPDLDNGVKEAHVFDDYPKGGR-VTEQGLLHDKLKITSPKANADDVVIEYTPHYMAVAETPHRIYDMY----GGQ-DSGLKFIVTLREPASRAISSWEFKNEFNPKKGHN-----------------------------------------DESRTLAKTVMDGRQRSAKLHSCISQAKLSAIKQRDRDLKLC--------------------------NPRKFLESPLFVSHVGKSMYALQLERWFDLFGRENFKVVFMDDMASDPVGVLRDVVAFLGLEFTSDDESKGLPDLQQWNKITGMAYNKTKSKKKDELGDQVTDDVKSELRAFFKPHNEALEKLLGMPLPDSW 996 L DG RC+ D G+ RC PTVFFFG SKCGTTSL+ WL HP +V P D +EAHVFD+ PK V+++G K + SP A+ D VI++TP+Y V E P RIYD Y GG+ S L+F+V LREP +R ISSWE+K+E G+ +E R L+ +G +L +C+ A S + R+ + C NPR +L L+ +HVGKS+YA+QL RWF+ FGRENFKVVF DD+ +P+ L +V+ F+GL+ KGL L+ W+ I G +N KK L QVT +++ E+RAFF P+N+ LE LLG+PLP SW Sbjct: 240 LADGKARCWTDEAGNGRCLPTVFFFGVSKCGTTSLSNWLSSHPRAVFVPPPEAHDY----REAHVFDNTPKYWHGVSDRG----KRESLSPMASWRDTVIDFTPNYAIVGEAPLRIYDYYHQAGGGRLRSNLRFLVVLREPVARTISSWEYKSEPLGPHGNGTGNSSYSSGGGAISEWPQRIGGVDIGASEDMRDRRRLDFVMEEQRPLSVAFREGAATVERLAACVRNATDSGLFGREPTVTYCRATKGRKQCNGRPPCELCNTHTEPWCNPRVYLGEVLYNAHVGKSVYAMQLRRWFNAFGRENFKVVFTDDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRSLEMWSDIVGARFNTADGAKKKVLDSQVTPEMREEMRAFFAPYNKDLEDLLGVPLPSSW 634
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: D7G7B1_ECTSI (Sulfotransferase, C-terminal Sulfotransferase, N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B1_ECTSI) HSP 1 Score: 218 bits (556), Expect = 4.350e-61 Identity = 121/279 (43.37%), Postives = 162/279 (58.06%), Query Frame = 1 Query: 25 RCFV-DGKGSQRCYPTVFFFGTSKCGTTSLARWLDHHPSTRWVSNPRRPDLDNGVKEAHVFDDYPKGGRVTEQGLLHDK---LKITSPKANADDVVIEYTPHYMAVAETPHRIYDMYG--GQDSGLKFIVTLREPASRAISSWEFKNEFNP-KKGH----NDESRTLAKTVMDGRQRSAKLHSCISQAKLSAIKQRDR--------DLKLCNPRKFLESPLFVSHVGKSMYALQLERWFDLFGRENFKVVFMDDMASDPVGVLRDVVAFLGLEFTSDDE 804 RCFV +G+ S RC+ V+FFG SKCGTTSLA W+ HP+ WVSN G EAHV E + D +T+P A D VI+YTPHY +AE P+RI DMYG D +K+I LREP +R ISSW+FK + +KG + E R+L + +GR+ + L C+S + Q DL++CNP FLE ++ SHVGKS+Y+LQLERW DLFGREN KV+F+++MA DP+G + V FLG++ + E Sbjct: 70 RCFVLEGEDSSRCHANVYFFGVSKCGTTSLAHWMARHPALSWVSNVWHTRHKQGG-EAHVM----------EMSTIKDNESTYALTAPMAAQTDTVIDYTPHYSILAEVPYRIRDMYGKTSYDGTVKYIAVLREPVARTISSWQFKYDLEGIEKGEAANPSSERRSLEEAFSEGREHALSLVKCLSDKENDQRNQIRHPGALKLYIDLQMCNPHAFLEHNMYFSHVGKSIYSLQLERWLDLFGRENVKVLFLEEMAVDPMGTITSVFDFLGVDLLDEKE 337
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: D7G7A7_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A7_ECTSI) HSP 1 Score: 199 bits (507), Expect = 1.840e-54 Identity = 118/315 (37.46%), Postives = 175/315 (55.56%), Query Frame = 1 Query: 121 LDHHPSTRWVSNPRRPDLDNGVKEAHVFDDYPKGGRVTEQGLLHD----KLKITSPKANADDVVIEY---TPHYMAVAETPHRIYDMYG--GQDSGLKFIVTLREPASRAISSWEFKNEF-NPKKGHND-----ESRTLAKTVMDGRQRSAKLHSCISQAKLSAI------KQRDRDLKLCNPRKFL--ESPLFVSHVGKSMYALQLERWFDLFGRENFKVVFMDDMASDPVGVLRDVVAFLGLEFTSDDESKGLPDLQQWNKITGMAYNKTKSKKKDELGDQVTDDVKSELRAFFKPHNEALEKLLGMPLPDSW 996 + HHP+ +WVSN + +EAHV D+ G+ Q +L K T+P A D VI+ TPH AE P+RI D+YG +D K+++ LR+P +RAISSW K + + ++G + ++R+LA+ + G A L+ C + + A +Q+ +L+ C R FL L+ +HV K MYA QLERWF L GREN KV F+++ A+DPVG L + F+GL+ ++ KGLP+ + W + +N+T K+K L QVT ++ +R FF HN LE+LLG PLPD+W Sbjct: 1 MAHHPALQWVSNLHM--IGRVAEEAHVLDEL---GKEDFQQMLGQGPTGKYGQTAPFAEESDKVIDCAADTPHCSIKAEVPYRILDIYGDAARDGSNKYLIQLRDPVARAISSWTSKFDLLSLEEGFVEGDSAGDTRSLAEAIQQGEHGMAALNDCEGKERRLAAPSWDPERQKVMELERCPMRNFLGHSQGLYWAHVAKGMYARQLERWFALVGRENIKVTFLEETAADPVGALASIFEFIGLDLLDEEGEKGLPNREAWESVVATVHNETDEKRKTILDQQVTPELLQSMRDFFASHNAELEELLGRPLPDNW 310
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: A0A6H5L245_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L245_9PHAE) HSP 1 Score: 145 bits (365), Expect = 1.240e-35 Identity = 65/133 (48.87%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 598 CNPRKFLESPLFVSHVGKSMYALQLERWFDLFGRENFKVVFMDDMASDPVGVLRDVVAFLGLEFTSDDESKGLPDLQQWNKITGMAYNKTKSKKKDELGDQVTDDVKSELRAFFKPHNEALEKLLGMPLPDSW 996 CNPR +L L+ +HVGKS+YA+QL RWF+ FG ENFKVVF +D+ +P+ L +V+ F+GL+ KGL +L+ W++I G +N KK L QVT +++ E+RAFF P+N LE LLG+PLP SW Sbjct: 105 CNPRVYLGEILYNAHVGKSVYAMQLRRWFNAFGSENFKVVFTEDLEEEPIKTLEEVLDFIGLDMVDPQGDKGLRNLEMWSEIVGARFNTADGAKKKVLDSQVTPEMREEMRAFFAPYNRDLEDLLGVPLPSSW 237
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: A0A6H5L1A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1A9_9PHAE) HSP 1 Score: 140 bits (354), Expect = 2.160e-32 Identity = 75/154 (48.70%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 7 LEDGSDRCFVDGKGSQRCYPTVFFFGTSKCGTTSLARWLDHHPSTRWVSNPRRPDLDNGVKEAHVFDDYPKGGR-VTEQGLLHDKLKITSPKANADDVVIEYTPHYMAVAETPHRIYDMY----GGQ-DSGLKFIVTLREPASRAISSWEFKNE 450 L DG RC+ D G+ RC PTVFFFG SKCGTTSL+ WL HP +V P D +EAHVFD+ P+ V+++G K + SP A++ D VI++TP+Y V E P RIYD Y GG+ S L+F+V LREP +R ISSW++K+E Sbjct: 238 LADGKARCWTDEAGNGRCLPTVFFFGVSKCGTTSLSNWLSSHPRAVFVPPPEAHDY----REAHVFDNTPRYWHGVSDRG----KRESLSPVASSRDTVIDFTPNYAIVGEAPLRIYDYYHQAGGGRLRSNLRFLVVLREPVARTISSWQYKSE 383
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: A0A835YNP6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNP6_9STRA) HSP 1 Score: 125 bits (313), Expect = 5.560e-28 Identity = 106/342 (30.99%), Postives = 150/342 (43.86%), Query Frame = 1 Query: 46 GSQRCYPTVFFFGTSKCGTTSLARWLDHHPSTRWVSNPRRPDLDNGVKEAHVFDDYPKGGRVTEQGLLHDKLKITSPKAN-ADDVVIEYTPHYMAVAETPHRIYDMYGGQDSGLKFIVTLREPASRAISSWEFKNEFN-------------------PKKGHNDESRTLAKTVMDGRQRSAKLHSCISQAKLSAIKQRDR-------DLKLCNPRKFLESPLFVSHVGKSMYALQLERWFDLFGRENFKVVFMDDMASDPVGVLRDVVAFLGLEFTSDDESKGLPD----LQQWNKITGMAYNKTKSKKKDELGDQVTDDVKSELRAFFKPHNEALEKLLGM 978 G RC P V FFG SK GTTSLA WL HP +++ RP Y KG + + + ++ K +P A+ DVV++YTPHY V E P+RI + S KFIV LREPA RAISSW FK + P H+ L K++ G ++A+ +C+ + +++A R DL+LCN + E G++ Y ++ SD LRD V E + D +K + L+ W+ + YN T+ + EL DQVT + LR F+ P N AL+ LL M Sbjct: 2 GQTRCLPNVVFFGVSKAGTTSLAHWLSQHPQVKFMGG--RPSESRA---------YLKGRTLAD---IRERSKRLAPSADPVSDVVVDYTPHYAMVPEVPYRICHLL--DCSSTKFIVLLREPAERAISSWRFKERYKLKRDPEAYISALNAMRAGQPTASHHHAPELLTKSMERGMAKAAEWLACV-EVEVAAAAAAGRNVTADAIDLQLCNAVRLFE--------GQAAY----------------------EVPSDGSLSLRDHVG--KPERSGPDSAKWQANYHLSLEYWDSVLSKRYNPTR--RIPELEDQVTSYDRGALRRFYAPLNAALDDLLMM 292
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: L1J6M3_GUITC (Sulfotransfer_1 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6M3_GUITC) HSP 1 Score: 124 bits (310), Expect = 1.390e-27 Identity = 90/308 (29.22%), Postives = 143/308 (46.43%), Query Frame = 1 Query: 64 PTVFFFGTSKCGTTSLARWLDHHPSTRWVSNPRRPDLDNGVKEAHVFDDYPKGGRVTEQGLLHDKLKITSPKANADDVVIEYTPHYMAVAETPHRIYDMYGGQDSGLKFIVTLREPASRAISSWEFKNEFNPKKGHNDESRTLAKTVMDGRQRSAKLHSCISQAKLSAIKQRDRDLKLCNPRKFLESP-LFVSHVGKSMYALQLERWFDLFGRENFKVVFMDDMASDPVGVLRDVVAFLGLEFTSDDESKGLPDLQQWNKITGMAYNKTKSKKKDELGDQVTDDVKSELRAFFKPHNEALEKLLGMPL 984 P G+SKCGT+S+ R+L P S + +++ + + G+ +L YTPHY+ TP+ + ++G + + ++F+V LREP +RA+SS+ FK + ESRTLA+ + G Q + I D+ L C P L P LF HVGK +Y QL RW +F +E F V +++ + DPVG L ++++ +G+ + +D K L+Q +N T+S +V +L+AF+ PHNE L +LLG L Sbjct: 37 PDFMLLGSSKCGTSSVIRYLLAVPEVSLASRVGMIETQEEIQDCIAYSSRLQEGQGASASML-----------------AHYTPHYIYHPMTPYNLERLFGSEHN-IRFLVMLREPVARAVSSYYFKVKTER------ESRTLAEAISAGIQYHTNMRHKIIYI--------DKTLPDCPP---LHDPNLFNDHVGKGVYHEQLRRWMHIFPKERFYVCTLEEFSQDPVGKLSEMLSHIGM--SEEDIRKSRSVLEQ---TVQKKWNVTQSS-----SSSADQEVLEQLKAFYAPHNEKLFQLLGRRL 299
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Match: A0A7S4KR35_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KR35_GUITH) HSP 1 Score: 120 bits (300), Expect = 2.810e-25 Identity = 98/347 (28.24%), Postives = 159/347 (45.82%), Query Frame = 1 Query: 64 PTVFFFGTSKCGTTSLARWLDHHPSTRWVSNPRRPDLDNGVK-----------EAHVFD---DYPKGGRVTEQGLLHDKLKITSPKANADDVVIEYTPHYMAVAETPHRIYDMYGGQDSGLKFIVTLREPASRAISSWEFKNEFNPKKGHNDESRTLAKTVMDGRQRSAKL-HSCISQAKLS----------------------AIKQR--DRDLKLCNPRKFLESP-LFVSHVGKSMYALQLERWFDLFGRENFKVVFMDDMASDPVGVLRDVVAFLGLEFTSDDESKGLPDLQQWNKITGMAYNKTKSKKKDELGDQVTDDVKSELRAFFKPHNEALEKLLGMPL 984 P G+SKCGT+S+ R+L P S + ++ E H+FD ++ + Q + + A+A ++ YTPHY+ TP+ + ++G + + ++F+V LREP +RA+SS+ FK + ESRTLA+ + G Q + H +S+ L +K+ D+ L C P L P LF HVGK +Y QL RW +F +E F V +++ + DPVG L ++++ +G+ + +D K L+Q +N T+S +V +L+AF+ PHNE L +LLG L Sbjct: 104 PDFMLLGSSKCGTSSVIRYLLAVPEVSLASRVGMIETQEEIQDVSDEGNFDPLETHIFDQKVEFSPVELMRAQCIAYSSRLQEGQGASAS-MLAHYTPHYIYHPMTPYNLERLFGSEHN-IRFLVMLREPVARAVSSYYFKVKTER------ESRTLAEAISAGIQYHTNMRHKIVSECGLDHDAEVVCLEDAEPALGREEMVQKLKEIYIDKTLPDCPP---LHDPNLFNDHVGKGVYHEQLRRWMHIFPKERFYVCTLEEFSQDPVGKLSEMLSHIGM--SEEDIRKSRSVLEQ---TVQKKWNVTQSS-----SSSADQEVLEQLKAFYAPHNEKLFQLLGRRL 429 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1029.333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1029.333.1 >prot_L-elsbetiae_contig1029.333.1 ID=prot_L-elsbetiae_contig1029.333.1|Name=mRNA_L-elsbetiae_contig1029.333.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp MAVAETPHRIYDMYGGQDSGLKFIVTLREPASRAISSWEFKNEFNPKKGHback to top mRNA from alignment at L-elsbetiae_contig1029:13163..19834- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1029.333.1 ID=mRNA_L-elsbetiae_contig1029.333.1|Name=mRNA_L-elsbetiae_contig1029.333.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6672bp|location=Sequence derived from alignment at L-elsbetiae_contig1029:13163..19834- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1029:13163..19834- >mRNA_L-elsbetiae_contig1029.333.1 ID=mRNA_L-elsbetiae_contig1029.333.1|Name=mRNA_L-elsbetiae_contig1029.333.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1362bp|location=Sequence derived from alignment at L-elsbetiae_contig1029:13163..19834- (Laminarionema elsbetiae ELsaHSoW15)back to top |