mRNA_L-elsbetiae_contig10284.327.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: D8LJ67_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ67_ECTSI) HSP 1 Score: 346 bits (887), Expect = 9.940e-113 Identity = 186/211 (88.15%), Postives = 194/211 (91.94%), Query Frame = 1 Query: 1 GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTRDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMD--EEGGA-DDSAETV------INELMATTADELEQYQQIDRERMASEANMARKKGLRRWNRLMPADE 606 G A QGIG ASGKGL+NVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMF+QMTRDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMD +EG A DD+ +TV INELMATTADELEQYQQIDRER+ +EA MAR+KGLRRWNRLMPADE Sbjct: 123 GIAQEQGIGMASGKGLNNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFTQMTRDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDNNDEGTAMDDNGDTVVHDNEQINELMATTADELEQYQQIDRERLVTEAEMAREKGLRRWNRLMPADE 333
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A6H5JCX1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX1_9PHAE) HSP 1 Score: 238 bits (606), Expect = 1.790e-71 Identity = 148/282 (52.48%), Postives = 154/282 (54.61%), Query Frame = 1 Query: 1 GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEGGADDSAETVINELMATTADELEQYQQIDRERMASEANMARKKGLRRWNRLMPADE 606 G A QGIG+ASGKGL+NVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMF+QMTR DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERK ER+ +EA MAR+KGLRRWNRLMPADE Sbjct: 28 GIAQEQGIGTASGKGLNNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFTQMTRAMDILEDFFTFRGYSYLRLDGATSSEERERRMARFNAPDSPYFVFVLSTRAGGLGLNLATADTVILFDSDWNPMMDMQAQDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERK-------------------------------------------ERLVTEAEMAREKGLRRWNRLMPADE 266
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A7S3UZW3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZW3_HETAK) HSP 1 Score: 192 bits (487), Expect = 2.130e-54 Identity = 124/290 (42.76%), Postives = 153/290 (52.76%), Query Frame = 1 Query: 1 GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMT--------------------------------------------------------------------------------RDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDE-----EGGADDS---AETVINELMATTADELEQYQQIDRERMASEANMARKKGLRRWNRLMPADE 606 G A+L+ +GL+NV MQLRKVCNHPYLF D W D L R++GKFELLDR+LPKL+ GHR+LMFSQMT +DRAHRIGQK+EVRV RL T+SPVEE+I+SRAT+KLNM GLVVEAG FN+ SK ERKAM++TLLRE DE +G ++S + +N+L+A T E + YQ++D ER A EA A +G W RLM ADE Sbjct: 311 GSASLRSSSGQQMRGLNNVIMQLRKVCNHPYLFLADGWQLDASLWRAAGKFELLDRLLPKLRRAGHRVLMFSQMTAVMGLLEDYFRLRGLAHLRLDGSTSAEDREQRMARFNAPDSPYFVFLLSTRAGGLGLNLATADTVVLFDSDWNPMMDAQAQDRAHRIGQKNEVRVLRLCTNSPVEEKILSRATEKLNMNGLVVEAGGFNKASKEHERKAMMQTLLREWDENDHDSDGEGEESLIPTDEELNQLLAITPAEFDLYQRMDAEREAQEAEEAEARGEPGWQRLMGADE 600
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: G5AI53_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AI53_PHYSP) HSP 1 Score: 189 bits (480), Expect = 1.070e-53 Identity = 122/259 (47.10%), Postives = 141/259 (54.44%), Query Frame = 1 Query: 40 KGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEGG----ADDSAETV-----INELMATTADELEQYQQIDRERMASEA 549 KGLSNV MQLRKVCNHPYLF + + D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+ DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM LVVEAGKFN SK AER+AMLE+L++ EE DD A V INE+MA T +EL YQ++D ER A EA Sbjct: 31 KGLSNVLMQLRKVCNHPYLFQTNDYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNRSKEAERRAMLESLIKMEQEEAAHAAHGDDDASNVLLDDEINEMMALTDEELALYQRLDGERKAREA 289
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: M4C5P4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5P4_HYAAE) HSP 1 Score: 189 bits (481), Expect = 4.020e-52 Identity = 123/268 (45.90%), Postives = 145/268 (54.10%), Query Frame = 1 Query: 16 QGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEGG----ADDSAETV-----INELMATTADELEQYQQIDRERMASEAN 552 +G + KGLSNV MQLRKVCNHPYLF + + D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+ DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM LVVEAGKFN SK AER+AMLE+L++ EE DD A TV IN +MA T +EL YQ++D ER+ EAN Sbjct: 639 KGKAKYTSKGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNRSKEAERRAMLESLIKMEQEEAAHAATGDDEASTVLMDDEINAMMALTDEELALYQRLDCERINREAN 906
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A3M6VBP2_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBP2_9STRA) HSP 1 Score: 189 bits (481), Expect = 4.110e-52 Identity = 121/259 (46.72%), Postives = 143/259 (55.21%), Query Frame = 1 Query: 40 KGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEG-----GADDSAETV----INELMATTADELEQYQQIDRERMASEA 549 KGLSNV MQLRKVCNHPYLF + + D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+ DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM LVVEAGKFN SK AER+AMLE+L++ EE G D+S+ + INE+MA T +EL YQ++D ER A EA Sbjct: 760 KGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNRSKEAERRAMLESLIKMEQEEAAHAVNGEDESSNVLLDDEINEMMALTDEELALYQRVDTERKAREA 1018
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A6G0P1J6_9STRA (Chromatin structure-remodeling complex subunit n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0P1J6_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.040e-51 Identity = 122/272 (44.85%), Postives = 146/272 (53.68%), Query Frame = 1 Query: 1 GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEG-----GADDSAETV----INELMATTADELEQYQQIDRERMASEA 549 G +G + KGLSNV MQLRKVCNHPYLF + + D D++RSSGKFELLDRMLPKLK+ GHR+LMFSQMT+ DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM LVVEAGKFN SK AER+AMLE+L++ EE G DDS+ + INE+MA T +EL Y ++D ER A EA Sbjct: 734 GSGKKKGKAKYTSKGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKSAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNRSKEAERRAMLESLIKMEQEEAAHAAHGEDDSSNVLLDDEINEMMALTDEELALYHRLDMERKAREA 1005
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A8K1C7Y6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y6_PYTOL) HSP 1 Score: 187 bits (476), Expect = 1.940e-51 Identity = 120/259 (46.33%), Postives = 142/259 (54.83%), Query Frame = 1 Query: 40 KGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEG------GADDSAETV----INELMATTADELEQYQQIDRERMASE 546 KGLSNV MQLRKVCNHPYLF + +P D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+ DRAHRIGQK+EVRVFRLVT+SPVEE+I++RATDK+NM LVVEAGKFN SK AER+A+LE+L++ EE G DDS+ + INE+MA T +EL Y +ID ERM E Sbjct: 810 KGLSNVLMQLRKVCNHPYLFQVNGYPLDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILARATDKMNMNNLVVEAGKFNNRSKEAERRALLESLIKMESEEAAANAANGEDDSSTVLLDDEINEMMALTDEELALYHRIDTERMQRE 1068
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A024GRN0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRN0_9STRA) HSP 1 Score: 186 bits (473), Expect = 4.880e-51 Identity = 123/262 (46.95%), Postives = 142/262 (54.20%), Query Frame = 1 Query: 40 KGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEGGADDSAE--TV-----------INELMATTADELEQYQQIDRERMASE 546 KGLSNV MQLRKVCNHPYLF +P D DL+RSSGKFELLDRMLPKLKA GHR+LMFSQMT+ DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRAT+KLNM LVVEAGKFN SK AER+AMLE+L+R EE A+ + + TV INELMA T +EL YQ++D ER S+ Sbjct: 769 KGLSNVLMQLRKVCNHPYLFQPQGYPIDFDLVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHILEDYFQYRGFTYLRLDGSTSADEREQRMFMFNASDSPHFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATNKLNMNNLVVEAGKFNNRSKEAERRAMLESLIRMEAEEAAANANGDGNTVDEGLSVLENDEINELMALTEEELALYQRMDHERDRSD 1030
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: D0NZU0_PHYIT (Chromatin structure-remodeling complex subunit snf21-like protein n=19 Tax=Phytophthora TaxID=4783 RepID=D0NZU0_PHYIT) HSP 1 Score: 186 bits (472), Expect = 6.660e-51 Identity = 120/267 (44.94%), Postives = 145/267 (54.31%), Query Frame = 1 Query: 16 QGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEG-----GADDSAETV----INELMATTADELEQYQQIDRERMASEA 549 +G + KGLSNV MQLRKVCNHPYLF + + D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+ DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM LVVEAGKFN SK AER+AMLE+L++ EE G D+S+ + INE+MA T +EL Y ++D ER A E+ Sbjct: 763 KGKAKYTSKGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNASDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNKSKEAERRAMLESLIKMEQEEAAHAAHGDDESSNVLLDDEINEMMALTDEELALYHRLDDERKARES 1029 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10284.327.1 >prot_L-elsbetiae_contig10284.327.1 ID=prot_L-elsbetiae_contig10284.327.1|Name=mRNA_L-elsbetiae_contig10284.327.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKback to top mRNA from alignment at L-elsbetiae_contig10284:448..6289+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10284.327.1 ID=mRNA_L-elsbetiae_contig10284.327.1|Name=mRNA_L-elsbetiae_contig10284.327.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5842bp|location=Sequence derived from alignment at L-elsbetiae_contig10284:448..6289+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10284:448..6289+ >mRNA_L-elsbetiae_contig10284.327.1 ID=mRNA_L-elsbetiae_contig10284.327.1|Name=mRNA_L-elsbetiae_contig10284.327.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig10284:448..6289+ (Laminarionema elsbetiae ELsaHSoW15)back to top |