mRNA_L-elsbetiae_contig10284.327.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10284.327.1
Unique NamemRNA_L-elsbetiae_contig10284.327.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: D8LJ67_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ67_ECTSI)

HSP 1 Score: 346 bits (887), Expect = 9.940e-113
Identity = 186/211 (88.15%), Postives = 194/211 (91.94%), Query Frame = 1
Query:    1 GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTRDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMD--EEGGA-DDSAETV------INELMATTADELEQYQQIDRERMASEANMARKKGLRRWNRLMPADE 606
            G A  QGIG ASGKGL+NVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMF+QMTRDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMD  +EG A DD+ +TV      INELMATTADELEQYQQIDRER+ +EA MAR+KGLRRWNRLMPADE
Sbjct:  123 GIAQEQGIGMASGKGLNNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFTQMTRDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDNNDEGTAMDDNGDTVVHDNEQINELMATTADELEQYQQIDRERLVTEAEMAREKGLRRWNRLMPADE 333          
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A6H5JCX1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX1_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.790e-71
Identity = 148/282 (52.48%), Postives = 154/282 (54.61%), Query Frame = 1
Query:    1 GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEGGADDSAETVINELMATTADELEQYQQIDRERMASEANMARKKGLRRWNRLMPADE 606
            G A  QGIG+ASGKGL+NVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMF+QMTR                                                                                DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERK                                           ER+ +EA MAR+KGLRRWNRLMPADE
Sbjct:   28 GIAQEQGIGTASGKGLNNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFTQMTRAMDILEDFFTFRGYSYLRLDGATSSEERERRMARFNAPDSPYFVFVLSTRAGGLGLNLATADTVILFDSDWNPMMDMQAQDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERK-------------------------------------------ERLVTEAEMAREKGLRRWNRLMPADE 266          
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A7S3UZW3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZW3_HETAK)

HSP 1 Score: 192 bits (487), Expect = 2.130e-54
Identity = 124/290 (42.76%), Postives = 153/290 (52.76%), Query Frame = 1
Query:    1 GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMT--------------------------------------------------------------------------------RDRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDE-----EGGADDS---AETVINELMATTADELEQYQQIDRERMASEANMARKKGLRRWNRLMPADE 606
            G A+L+       +GL+NV MQLRKVCNHPYLF  D W  D  L R++GKFELLDR+LPKL+  GHR+LMFSQMT                                                                                +DRAHRIGQK+EVRV RL T+SPVEE+I+SRAT+KLNM GLVVEAG FN+ SK  ERKAM++TLLRE DE     +G  ++S    +  +N+L+A T  E + YQ++D ER A EA  A  +G   W RLM ADE
Sbjct:  311 GSASLRSSSGQQMRGLNNVIMQLRKVCNHPYLFLADGWQLDASLWRAAGKFELLDRLLPKLRRAGHRVLMFSQMTAVMGLLEDYFRLRGLAHLRLDGSTSAEDREQRMARFNAPDSPYFVFLLSTRAGGLGLNLATADTVVLFDSDWNPMMDAQAQDRAHRIGQKNEVRVLRLCTNSPVEEKILSRATEKLNMNGLVVEAGGFNKASKEHERKAMMQTLLREWDENDHDSDGEGEESLIPTDEELNQLLAITPAEFDLYQRMDAEREAQEAEEAEARGEPGWQRLMGADE 600          
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: G5AI53_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AI53_PHYSP)

HSP 1 Score: 189 bits (480), Expect = 1.070e-53
Identity = 122/259 (47.10%), Postives = 141/259 (54.44%), Query Frame = 1
Query:   40 KGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEGG----ADDSAETV-----INELMATTADELEQYQQIDRERMASEA 549
            KGLSNV MQLRKVCNHPYLF  + +  D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+                                                                                DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM  LVVEAGKFN  SK AER+AMLE+L++   EE       DD A  V     INE+MA T +EL  YQ++D ER A EA
Sbjct:   31 KGLSNVLMQLRKVCNHPYLFQTNDYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNRSKEAERRAMLESLIKMEQEEAAHAAHGDDDASNVLLDDEINEMMALTDEELALYQRLDGERKAREA 289          
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: M4C5P4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5P4_HYAAE)

HSP 1 Score: 189 bits (481), Expect = 4.020e-52
Identity = 123/268 (45.90%), Postives = 145/268 (54.10%), Query Frame = 1
Query:   16 QGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEGG----ADDSAETV-----INELMATTADELEQYQQIDRERMASEAN 552
            +G    + KGLSNV MQLRKVCNHPYLF  + +  D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+                                                                                DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM  LVVEAGKFN  SK AER+AMLE+L++   EE       DD A TV     IN +MA T +EL  YQ++D ER+  EAN
Sbjct:  639 KGKAKYTSKGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNRSKEAERRAMLESLIKMEQEEAAHAATGDDEASTVLMDDEINAMMALTDEELALYQRLDCERINREAN 906          
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A3M6VBP2_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBP2_9STRA)

HSP 1 Score: 189 bits (481), Expect = 4.110e-52
Identity = 121/259 (46.72%), Postives = 143/259 (55.21%), Query Frame = 1
Query:   40 KGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEG-----GADDSAETV----INELMATTADELEQYQQIDRERMASEA 549
            KGLSNV MQLRKVCNHPYLF  + +  D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+                                                                                DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM  LVVEAGKFN  SK AER+AMLE+L++   EE      G D+S+  +    INE+MA T +EL  YQ++D ER A EA
Sbjct:  760 KGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNRSKEAERRAMLESLIKMEQEEAAHAVNGEDESSNVLLDDEINEMMALTDEELALYQRVDTERKAREA 1018          
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A6G0P1J6_9STRA (Chromatin structure-remodeling complex subunit n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0P1J6_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.040e-51
Identity = 122/272 (44.85%), Postives = 146/272 (53.68%), Query Frame = 1
Query:    1 GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEG-----GADDSAETV----INELMATTADELEQYQQIDRERMASEA 549
            G    +G    + KGLSNV MQLRKVCNHPYLF  + +  D D++RSSGKFELLDRMLPKLK+ GHR+LMFSQMT+                                                                                DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM  LVVEAGKFN  SK AER+AMLE+L++   EE      G DDS+  +    INE+MA T +EL  Y ++D ER A EA
Sbjct:  734 GSGKKKGKAKYTSKGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKSAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNRSKEAERRAMLESLIKMEQEEAAHAAHGEDDSSNVLLDDEINEMMALTDEELALYHRLDMERKAREA 1005          
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A8K1C7Y6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y6_PYTOL)

HSP 1 Score: 187 bits (476), Expect = 1.940e-51
Identity = 120/259 (46.33%), Postives = 142/259 (54.83%), Query Frame = 1
Query:   40 KGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEG------GADDSAETV----INELMATTADELEQYQQIDRERMASE 546
            KGLSNV MQLRKVCNHPYLF  + +P D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+                                                                                DRAHRIGQK+EVRVFRLVT+SPVEE+I++RATDK+NM  LVVEAGKFN  SK AER+A+LE+L++   EE       G DDS+  +    INE+MA T +EL  Y +ID ERM  E
Sbjct:  810 KGLSNVLMQLRKVCNHPYLFQVNGYPLDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNAPDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILARATDKMNMNNLVVEAGKFNNRSKEAERRALLESLIKMESEEAAANAANGEDDSSTVLLDDEINEMMALTDEELALYHRIDTERMQRE 1068          
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: A0A024GRN0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRN0_9STRA)

HSP 1 Score: 186 bits (473), Expect = 4.880e-51
Identity = 123/262 (46.95%), Postives = 142/262 (54.20%), Query Frame = 1
Query:   40 KGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEGGADDSAE--TV-----------INELMATTADELEQYQQIDRERMASE 546
            KGLSNV MQLRKVCNHPYLF    +P D DL+RSSGKFELLDRMLPKLKA GHR+LMFSQMT+                                                                                DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRAT+KLNM  LVVEAGKFN  SK AER+AMLE+L+R   EE  A+ + +  TV           INELMA T +EL  YQ++D ER  S+
Sbjct:  769 KGLSNVLMQLRKVCNHPYLFQPQGYPIDFDLVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHILEDYFQYRGFTYLRLDGSTSADEREQRMFMFNASDSPHFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATNKLNMNNLVVEAGKFNNRSKEAERRAMLESLIRMEAEEAAANANGDGNTVDEGLSVLENDEINELMALTEEELALYQRMDHERDRSD 1030          
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Match: D0NZU0_PHYIT (Chromatin structure-remodeling complex subunit snf21-like protein n=19 Tax=Phytophthora TaxID=4783 RepID=D0NZU0_PHYIT)

HSP 1 Score: 186 bits (472), Expect = 6.660e-51
Identity = 120/267 (44.94%), Postives = 145/267 (54.31%), Query Frame = 1
Query:   16 QGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGKFELLDRMLPKLKAGGHRILMFSQMTR--------------------------------------------------------------------------------DRAHRIGQKHEVRVFRLVTDSPVEERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEG-----GADDSAETV----INELMATTADELEQYQQIDRERMASEA 549
            +G    + KGLSNV MQLRKVCNHPYLF  + +  D D++RSSGKFELLDRMLPKLKA GHR+LMFSQMT+                                                                                DRAHRIGQK+EVRVFRLVT+SPVEE+I+SRATDK+NM  LVVEAGKFN  SK AER+AMLE+L++   EE      G D+S+  +    INE+MA T +EL  Y ++D ER A E+
Sbjct:  763 KGKAKYTSKGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLMFSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFNASDSPFFIFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPVEEKILSRATDKMNMNNLVVEAGKFNNKSKEAERRAMLESLIKMEQEEAAHAAHGDDESSNVLLDDEINEMMALTDEELALYHRLDDERKARES 1029          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10284.327.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ67_ECTSI9.940e-11388.15Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JCX1_9PHAE1.790e-7152.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S3UZW3_HETAK2.130e-5442.76Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
G5AI53_PHYSP1.070e-5347.10Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
M4C5P4_HYAAE4.020e-5245.90Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VBP2_9STRA4.110e-5246.72Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A6G0P1J6_9STRA1.040e-5144.85Chromatin structure-remodeling complex subunit n=2... [more]
A0A8K1C7Y6_PYTOL1.940e-5146.33Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GRN0_9STRA4.880e-5146.95Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
D0NZU0_PHYIT6.660e-5144.94Chromatin structure-remodeling complex subunit snf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10284contigL-elsbetiae_contig10284:448..6289 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score345.9
Seed ortholog evalue1.3e-92
Seed eggNOG ortholog2880.D8LJ67
KEGG koko:K11647,ko:K11756,ko:K11757,ko:K11786,ko:K15192
KEGG Pathwayko04714,ko05225,map04714,map05225
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006338,GO:0006355,GO:0006357,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0010959,GO:0016043,GO:0016462,GO:0016514,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032991,GO:0034756,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043269,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0050789,GO:0050794,GO:0051049,GO:0051171,GO:0051252,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0070035,GO:0070603,GO:0071103,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140097,GO:1900390,GO:1900393,GO:1900400,GO:1901265,GO:1901363,GO:1902494,GO:1903506,GO:1904949,GO:2000112,GO:2001141
EggNOG free text desc.aortic smooth muscle cell differentiation
EggNOG OGsCOG0553@1,KOG0386@2759
Ec32 ortholog descriptionSNF2-related bromodomain protein
Ec32 orthologEc-02_004940.1
COG Functional cat.KL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021,ko03036
Exons5
Model size606
Cds size606
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10284.327.1prot_L-elsbetiae_contig10284.327.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10284 448..6289 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815257.4779313-CDS-L-elsbetiae_contig10284:447..5731622815257.4779313-CDS-L-elsbetiae_contig10284:447..573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 448..573 +
1691682800.3553681-CDS-L-elsbetiae_contig10284:447..5731691682800.3553681-CDS-L-elsbetiae_contig10284:447..573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 448..573 +
1622815257.4900286-CDS-L-elsbetiae_contig10284:1468..15701622815257.4900286-CDS-L-elsbetiae_contig10284:1468..1570Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 1469..1570 +
1691682800.368632-CDS-L-elsbetiae_contig10284:1468..15701691682800.368632-CDS-L-elsbetiae_contig10284:1468..1570Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 1469..1570 +
1622815257.5030224-CDS-L-elsbetiae_contig10284:3569..37391622815257.5030224-CDS-L-elsbetiae_contig10284:3569..3739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 3570..3739 +
1691682800.3786306-CDS-L-elsbetiae_contig10284:3569..37391691682800.3786306-CDS-L-elsbetiae_contig10284:3569..3739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 3570..3739 +
1622815257.5129917-CDS-L-elsbetiae_contig10284:4714..47841622815257.5129917-CDS-L-elsbetiae_contig10284:4714..4784Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 4715..4784 +
1691682800.3870072-CDS-L-elsbetiae_contig10284:4714..47841691682800.3870072-CDS-L-elsbetiae_contig10284:4714..4784Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 4715..4784 +
1622815257.5221863-CDS-L-elsbetiae_contig10284:6151..62891622815257.5221863-CDS-L-elsbetiae_contig10284:6151..6289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 6152..6289 +
1691682800.395428-CDS-L-elsbetiae_contig10284:6151..62891691682800.395428-CDS-L-elsbetiae_contig10284:6151..6289Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10284 6152..6289 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10284.327.1

>prot_L-elsbetiae_contig10284.327.1 ID=prot_L-elsbetiae_contig10284.327.1|Name=mRNA_L-elsbetiae_contig10284.327.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
GPAALQGIGSASGKGLSNVFMQLRKVCNHPYLFFDDRWPSDLDLIRSSGK
FELLDRMLPKLKAGGHRILMFSQMTRDRAHRIGQKHEVRVFRLVTDSPVE
ERIISRATDKLNMTGLVVEAGKFNRDSKAAERKAMLETLLREMDEEGGAD
DSAETVINELMATTADELEQYQQIDRERMASEANMARKKGLRRWNRLMPA
DE
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mRNA from alignment at L-elsbetiae_contig10284:448..6289+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10284.327.1 ID=mRNA_L-elsbetiae_contig10284.327.1|Name=mRNA_L-elsbetiae_contig10284.327.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5842bp|location=Sequence derived from alignment at L-elsbetiae_contig10284:448..6289+ (Laminarionema elsbetiae ELsaHSoW15)
GGTCCCGCTGCGTTGCAGGGTATCGGCAGCGCCTCCGGGAAGGGCCTGAG CAACGTCTTCATGCAGCTGCGGAAGGTTTGCAACCACCCCTACCTCTTCT TCGACGACAGATGGCCGTCGGATCTGGTGGGTCGCGCGTGGCGTCTGTTT TGAGTGTTTCCGTGTTGTTTTTGTACATCCCCTCACAACCGACGTAGTTA TTCATTTGCGGGTGCAATTCCTTATCTAAATATGTAGGAGAAAAATCACT CGAGGAGAGTTTCTCTCGACAAGTTGTGGGTGTTCTCGTCTCGATATATA CCGCTTAATGCAGCACCCGCCTTCATTCGCGGTGTTGTTGCATAACGACG GATCTAACAAGCCATTAGGTGAACCAATTAAAAGCACATGTGAATAGAAC AAATTAAAAGCAAATTTTCGAACAAGCCATTAACCTGCTGTAAGCGTTGT CGTCGTTGTCGTCATTCGGTGCAGTTGGTCGTGGTGGAGGTGTTGGGGCG TTGCGTTTGAGATAAAGAACCGCCGTGCTGACCACATTTGAGTGTTGACA TCGTTTTTTTCATATACCATGGTATACAACATACACACATAGGGCCTACG ATGCTCATGTACCACCGTTTTGATTGGAAGTATCCAAGTCCGAAAAAGTT CCAAAGTGTGCGAGATTGGTGAGCATGGCGTGTCTACGCTTTATGGACGC GGAGTCGTGCCACCCAGACACACGTGGTTGACGAAATGCAAGCACAGCAG CAGCAGCGGCGTGTGCTGCAAATGTCTACATGGGGTGGAACACGGTGTGA AGCCAGGGCGTGGATGCAGTGGAAACAATCTTGACGTGGACGTGGAACCA GCCGCCCAGCGCTGACGAAAACATCAACATATGTCAGACGAGATACGCCA TATGTAGCATCCTCAACAACTCAAACAACAACAACAGCAACAACAACAAC AACAACAACAACAACAACAACAACAACAACAATGACAATGACGACAACAA TACTACACCACACCGCAACAGGACTTGATCCGGAGCTCGGGGAAGTTCGA GCTCCTGGACCGAATGCTGCCCAAGCTCAAGGCGGGAGGGCACCGAATCC TCATGTTCAGCCAGATGACAAGGGTGAGAAAGGAAAAGGGAGAACCAGAC ATTGGCGTACAACCAAGACAAAATGGCGTGTCGAGAGTCGAGAAGACTAC TTGTTGTGCATCCAGACAGTCAAACGATCTTCATTTCGTTCTTTCGGCGG GAGGAGGGGGGACAACAGTGGATAGGCGCCGAGAGTGGATACATAGGACT AGTTGATGACGGGACTACTGTGAATGGACTATGAATGAAGGACCAGGCTG CCTTTGGTTCGGCAAATAGGGCAAACAATCACCGAAACGATCGCCGTGCT CGGTGACCCGAGGTGGTGGCCGGCGAAGCCACGCAGAAGGCTATACGGGG GGGTATGTGGCCCCCAAGGCACGCAAGAAGGGTCCATGGAAGAGCATGAC AGACGACGTACATATGCATGTACCATAAGAAAGTGGCCGGAAACGTTGTA GTGGTGCCTGCTCGTACTCTAAATAAAATCAACGTCGCCCCCTGCAAAGC ACCCTGGCTGCTAAGGAATTGTTTTCCGTATGGACAAGGCAGACAAGCAG GAAATACATGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCTTCTCCCT CCTCGCCCCCCTCNNNNNNNNNNAAAACACCCTCGGTTGTAAGGAATTGT TTTCCCCTTGGGCAAGACCACAAAACAGGATATATCCACCCCCCCCCCCC CCCCTACCCTCCCACACTTCAACGCCCCCCCCATCCCGCCTACAGGCCAT GGACATCCTGGAAGACTTCTTCACGTTCCGCGGGTACTCCTACCTCCGCC TCGACGGGGCCACGTCCTCCGATGAGCGGGAGAAGCGGATGGCCCGGTTT AACGCACCGGACTCGCCGTACTTCGTCTTCGTGCTCTCCACCAGGGCCGG GGGCCTGGGGCTCAACCTTGCCACGGCCGACACGGTCATTCTTTTCGACA GCGACTGGAACCCCATGATGGATATGCAGGCGCAGGTGTGTGTGTAGGTG TGTGTGTAGGTGTGTAGGTGTGTGTGTGCGTGTGTGTGTGTGTGTAGGTG TGTAGGTGTGCGTGTGCGTGTGTGCGTGTGTGTGTGCGCGCGCGCGCGTG TTTCTACTCTTTCGTGTTGTTGTCTTGAGGGGATGAGGGCGTGTGTGGAG GGTGTGTGGAGGGTGACGCGTCTTCGGTTGTTGCTTGGTTTTTGTGTGCT TTTCGTATTTTCTGTTCTGGGTGTTGTGTTTTTTTTGTCTTATTGTTGGT TGGTTTGCCTAATACTAAAGATCATGGGTGCCAAATCTACATACATGTTT ACCTCGTGAGAAAAGATGGCACGCGAGAAAATACACAGCAACATCGGTCT GTGGTTCGCTTCATGGCAAATATACTTCGAAATACAAATTTATTTGTCCG TGCGAGCGGGCACTAACGGGCTGTCAGCAATCATTTTGTGCGAGTATGTC TTGGACGAGTAGGTTGTTTTTCTGCTCGCTTCGCCAAATATTACGTCGCT GTATGGAATACCGTTTGAACCCCATATCGAGTCCTTGCTCTAGTGTGGGG TAGGTTCCATCTTTGATTCATTGTTTATTTTTTAGAAGGGGGTTAGTATG CCTACAACAGTCCCTCTGGAACGACTTTTTCGCAGACTGGACGTACGTAA GTAGACTGCTGACATTTGTATACATTAATTAAATTACACACGCAGACACA CACATGGTGCCCACGTGGCGGTCTCTGTCGTGATGCAACAAGACCAAAAA CGCCCCCACGTGAACGGCCGACAAGCTTTCCCCTCCTTCCCCGGACAAGC GAGAGGAGTTTGTCTCTGCTGCACTCCTGTACCGACCGACTGCCCTTTCC ATCTATCTCTCTCCTGCCACACGCACGCCACAACTCACTTTTGAAACCAA CCCCGGCCGCCGTCTTATGGATTATCCACCTGGGGTTGTTGGCTGCGTTG GTTGATGGACATTCGAACCCAGGACCGTGCCCACCGCATCGGGCAGAAGC ATGAGGTTCGCGTGTTTCGGTTGGTGACTGACAGTCCCGTGGAGGAGCGC ATTATCTCCAGGGCCACGGACAAGCTCAACATGACCGGGCTCGTTGTCGA GGCCGGGAAGTTCAACCGGGACTCCAAGGCGGCGGAGAGAAAGTGAGCTG CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGCT GTTGTTGTTGCTGCTGCTGCTGCTGCTATTACTGCTGTTGCTGTTGTTGT TGCTGCTGCTGCTGCTGCTGCTATCGCTGCCGTTGCTGTTGTTGCTGCTG CTGCTGCTGCTGTGATTCGGCTTCCTGTTGTTGCGGTGGCGTCGTCGGTG TGACCTAAAATAGTACCATCTGGCACCACTTGATGCTACAAGTACTACGT GGGAATCAGGTTCTCGTTGTCTCGGTGCCGTCGCCAGTGGTCTATATGGG TACCTGACGACATCAGCAGTTTATTGAGCACGTTCATTGGCAGCGAATAA GTATGAGTACGCCCCGTCGGTTGTCAACAACCCTGCGGGCCATTGACGGT TTCAAGAGCTTGGCAGCGGCAAGCAGCGAAACCGGACAAATTCCAAGAAC AAGCGTGTACGCCCCCCCCCTCCCCCCCTGCCCCTCCCCGCGGCGCCCCA TTCACAACCCCCCGCGTCCCCTCCGGTGTGTGCGGTTCTGTCTATTTAGC TCTGTTTGACTTTCGAAGACTCTGTTTTGGTTCGCGTCATGTCCGCGAGA CTCTTCCCAGAACGGAGGGTTTGCCCTATTTTAGTACTACGTGCGTGCAT TCATGCAATGTGCCGGTCGCCATTGCCACGGCGGTGCGCGTGCGTTTTTT GCTTTATTTTGTTCCAGAGAGCGGGATGACGAAGATGCTGCTCGGGAGAG GGTCACCCTCACGCTTGCATCCTCGATCGAACAGACCCTTCTGCGCTTTT GCATTATTTTTTTCCAGAGGGATCGATGCTTTATTTATGTAGCCACTTAT CGGCAGAGGTACATTTTCGTACCCTCGCGTTGTAGGTACTACATTGTAGT AACCTCAGACATAAACGACCCTTTGTGTTTCGCGCTTGGTTTTGCTTTGC TTTGCTTTTTTCCCCAGAGCGATGCTCGAGACTCTTCTGCGGGAAATGGA CGAAGAAGGGGGTGCCGATGACAGCGCCGAGACCGTGGTGCACGACAACG ACCAGGCATGGCCATACAAACCAATACCGAGTCAAAAAAAAGGAAAAGCA TCCCCCCAAATCAAAGAAAGATGTCCCACGGAGCCCCCGTATTCACCACG GAGCCCGCTATAGCGCAAGTCTCCGATTAAGTTTCTTGTGTCGCGACAGC AACACGACTACATGGTGTGTCTTTATTTAGGCATGGAAAACGAAAACGAA ATGCTTTTGTATGTATACGACAAGCGCATGCAGATCCCGACACATGTAGT CTCTTGTGTCTGCGTGCTCGCTGTTGGTCTCTGCGTCGTCGTTACTACTG CTGTAAGTAGTGGCTTGTGTAGATAATTATTTGGCACCGACAGAACCGGT GTGCACCGAAAAAAAGAGCTCAGGTGTGTTGTTCAGCTGTTCGTAGTGCT ACATCCGTACGGCACGTCGAAGAAGCGTCGATCAAAGCAAAAGAGGCGTT TTTTTTTCCTCACCATTCAATTGAAGGGTGGCTTTCACAAACTCTGGCTA AACCCACAACCCACCCCGTGTTACGTACTGGTAGGTTGGGCTTCCTAAAG TCTATGAAACCAAAAGATGAATTAATCTCGAACGTGTCGGAACTGAGATG CATACTGTAAGTCTAAGTTTGAAGCCAAGCTAGTCAACTGACCATGGCAA CGATCAAGGACGAATTGTAGGCAAAAAATACAGCGAAAATATATATATAT TCAAGGGCCCAAACCCAGATACCGTTATCATGCGAGTCATCGCACCCCCC CCGTACCGATTTTCAAAAGCTCGATTACTCTTCAACGAAGAGGGTGCCCA CACCAAATGGCACTTTTTTAGAGACAGCTCTGGACGTGATCGTCCCAATG CCACCCTGTTCGATGCCGGCACCCCCCTTCGGCAAGGTGTAATCGAGCTT TGATAATCGTTAGGGGGGGGTGCGATGGCTCGCATGATTACGGTAGGTCA TCGAGTTGATTGTTCAATGAGCGGTTTTCCGTTGGCAAATATCGAGAAGA AAACATGCTTCAATGTGGTGGCTGGTACCTAAAAGAGGGCGGCTTGATAG CAAGCCTGCTACCGACCTCGTTTGGCGCACTTCCAACTAGCAAACAAAAT ACGGGGGGGGGGGGAAAGGTGTGGCACACAGACAAAGAACAGAGCAAAGG ATTGGGCAGCAGCTGTCAACAGAACTACCTCTAGAAGTTACTGCGAACAC ACACGAGTGTTCCAATGAACAAAGACAAGCGCCACTTTCCCTCTTCTCTA TATTTGTAGGTGCTGAATTACTTTGTCCTCTGAAAGCGAAACGAAATGAA CAAGATTTGGGATTCGCAATTTTTTGGAAAATGCGCGACCTTTCATTCGG CCAGATTAACGAGCTCATGGCCACCACTGCGGACGAGCTCGAGCAGTACC AGCAGATCGACAGGGAGAGGATGGCGTCGGAGGCGAACATGGCCCGCAAG AAGGGCCTCAGGAGGTGGAACCGCCTCATGCCCGCGGACGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10284:448..6289+

>mRNA_L-elsbetiae_contig10284.327.1 ID=mRNA_L-elsbetiae_contig10284.327.1|Name=mRNA_L-elsbetiae_contig10284.327.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig10284:448..6289+ (Laminarionema elsbetiae ELsaHSoW15)
GGTCCCGCTGCGTTGCAGGGTATCGGCAGCGCCTCCGGGAAGGGCCTGAG
CAACGTCTTCATGCAGCTGCGGAAGGTTTGCAACCACCCCTACCTCTTCT
TCGACGACAGATGGCCGTCGGATCTGGGTCCCGCTGCGTTGCAGGGTATC
GGCAGCGCCTCCGGGAAGGGCCTGAGCAACGTCTTCATGCAGCTGCGGAA
GGTTTGCAACCACCCCTACCTCTTCTTCGACGACAGATGGCCGTCGGATC
TGGACTTGATCCGGAGCTCGGGGAAGTTCGAGCTCCTGGACCGAATGCTG
CCCAAGCTCAAGGCGGGAGGGCACCGAATCCTCATGTTCAGCCAGATGAC
AAGGGACTTGATCCGGAGCTCGGGGAAGTTCGAGCTCCTGGACCGAATGC
TGCCCAAGCTCAAGGCGGGAGGGCACCGAATCCTCATGTTCAGCCAGATG
ACAAGGGACCGTGCCCACCGCATCGGGCAGAAGCATGAGGTTCGCGTGTT
TCGGTTGGTGACTGACAGTCCCGTGGAGGAGCGCATTATCTCCAGGGCCA
CGGACAAGCTCAACATGACCGGGCTCGTTGTCGAGGCCGGGAAGTTCAAC
CGGGACTCCAAGGCGGCGGAGAGAAAGACCGTGCCCACCGCATCGGGCAG
AAGCATGAGGTTCGCGTGTTTCGGTTGGTGACTGACAGTCCCGTGGAGGA
GCGCATTATCTCCAGGGCCACGGACAAGCTCAACATGACCGGGCTCGTTG
TCGAGGCCGGGAAGTTCAACCGGGACTCCAAGGCGGCGGAGAGAAAAGCG
ATGCTCGAGACTCTTCTGCGGGAAATGGACGAAGAAGGGGGTGCCGATGA
CAGCGCCGAGACCGTGAGCGATGCTCGAGACTCTTCTGCGGGAAATGGAC
GAAGAAGGGGGTGCCGATGACAGCGCCGAGACCGTGATTAACGAGCTCAT
GGCCACCACTGCGGACGAGCTCGAGCAGTACCAGCAGATCGACAGGGAGA
GGATGGCGTCGGAGGCGAACATGGCCCGCAAGAAGGGCCTCAGGAGGTGG
AACCGCCTCATGCCCGCGGACGAGATTAACGAGCTCATGGCCACCACTGC
GGACGAGCTCGAGCAGTACCAGCAGATCGACAGGGAGAGGATGGCGTCGG
AGGCGAACATGGCCCGCAAGAAGGGCCTCAGGAGGTGGAACCGCCTCATG
CCCGCGGACGAG
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