mRNA_L-elsbetiae_contig10250.295.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10250.295.1 vs. uniprot
Match: D8LKM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM2_ECTSI) HSP 1 Score: 366 bits (939), Expect = 7.370e-117 Identity = 187/213 (87.79%), Postives = 194/213 (91.08%), Query Frame = 1 Query: 16 MRSGVPLVVLSLYLGTQSLSCLVYEGVTDCALKNSGTRHVNYSLGTLYVMWMLFRHLTGSNAKQVMLFRLRAHQSYAVVFSFLSTMYSLYEYAAQGIPYRNNTSNLMADLVIFLCWFLSIVTIINAAPREHTPAIMYLSTVIPDTTLQIESLEVAPDGAFTENDRRRLSLGPLSRDHGPLGRMLRETGRPLSESYRG-APEGGSPRGTGAFTH 651 M SGVPLV LSLYLGTQSLSCLVYEGVTDCALKNSGTRH+NYSLG LYVMWMLFRHLTGSNAKQVMLFRLR HQSYAVVFSFLSTMYSLYEYAA+GIPYRN S LMADL+IFL WFLSIVTIINAAPREHTPAIMYLSTVIPDTTLQIESLEVAPDGAFTENDR+RLSLGPLSRD GPLGRMLRETGRPL+ SYRG E GS + F+H Sbjct: 1 MSSGVPLVCLSLYLGTQSLSCLVYEGVTDCALKNSGTRHLNYSLGNLYVMWMLFRHLTGSNAKQVMLFRLRNHQSYAVVFSFLSTMYSLYEYAAKGIPYRNPASELMADLIIFLFWFLSIVTIINAAPREHTPAIMYLSTVIPDTTLQIESLEVAPDGAFTENDRKRLSLGPLSRDQGPLGRMLRETGRPLNASYRGYTQEMGSQHDSAIFSH 213 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10250.295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10250.295.1 >prot_L-elsbetiae_contig10250.295.1 ID=prot_L-elsbetiae_contig10250.295.1|Name=mRNA_L-elsbetiae_contig10250.295.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=212bp MRSGVPLVVLSLYLGTQSLSCLVYEGVTDCALKNSGTRHVNYSLGTLYVMback to top mRNA from alignment at L-elsbetiae_contig10250:307..6284- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10250.295.1 ID=mRNA_L-elsbetiae_contig10250.295.1|Name=mRNA_L-elsbetiae_contig10250.295.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5978bp|location=Sequence derived from alignment at L-elsbetiae_contig10250:307..6284- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10250:307..6284- >mRNA_L-elsbetiae_contig10250.295.1 ID=mRNA_L-elsbetiae_contig10250.295.1|Name=mRNA_L-elsbetiae_contig10250.295.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1272bp|location=Sequence derived from alignment at L-elsbetiae_contig10250:307..6284- (Laminarionema elsbetiae ELsaHSoW15)back to top |