|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-27_000040.1 |
| Exons | 2 |
| Model size | 1347 |
| Cds size | 1341 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815253.2950091-UTR-L-elsbetiae_contig1023:1410..1416 | 1622815253.2950091-UTR-L-elsbetiae_contig1023:1410..1416 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1023 1411..1416 + |
| 1691682797.7558858-UTR-L-elsbetiae_contig1023:1410..1416 | 1691682797.7558858-UTR-L-elsbetiae_contig1023:1410..1416 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1023 1411..1416 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815253.3101418-CDS-L-elsbetiae_contig1023:1416..2094 | 1622815253.3101418-CDS-L-elsbetiae_contig1023:1416..2094 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1023 1417..2094 + |
| 1691682797.7674928-CDS-L-elsbetiae_contig1023:1416..2094 | 1691682797.7674928-CDS-L-elsbetiae_contig1023:1416..2094 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1023 1417..2094 + |
| 1622815253.3214457-CDS-L-elsbetiae_contig1023:2584..3247 | 1622815253.3214457-CDS-L-elsbetiae_contig1023:2584..3247 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1023 2585..3247 + |
| 1691682797.7784224-CDS-L-elsbetiae_contig1023:2584..3247 | 1691682797.7784224-CDS-L-elsbetiae_contig1023:2584..3247 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1023 2585..3247 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1023.277.1 >prot_L-elsbetiae_contig1023.277.1 ID=prot_L-elsbetiae_contig1023.277.1|Name=mRNA_L-elsbetiae_contig1023.277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=447bp
MQLCPQRKRRTRTTASTGLRSLNSTKTRRQGGESGADNGTLVSTATSGAN
QHQHRSTAPQTAREHTEEPPLQAPPPHDVKNTASRQGLDGDKDSASCSER
LGDDRAQNENEDCIVVITASDGRVACTNCQRWFSSDRVGVHQNICKRVNP
PSARDTSKREQGGTASSKKAKFTSSRVESRRRKSGRSTVGETHAAARTRW
GRGRSVGGEKSSIKDHHPIDDARDIMYFGSNDRVRRGSPPAQTQVDTTAT
PRAPPRGNNSPSSCAQYRGSSFSSSSSSLGLEESCPPQTEKQRQQRKKQH
RRRRVSPRWKESWDNHRHARRPFSATNPLSSSKDMTPLAPVEGPGKRVFV
GRAVSTSCSPVRLRRSSASTAAAAEVRPAGNEGHARRGGVAGIGGGGGSE
VVLARSSTDISRRGAASGGVGTERLSGGMVGFFSPSGDRMRVRLLK* back to topmRNA from alignment at L-elsbetiae_contig1023:1411..3247+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1023.277.1 ID=mRNA_L-elsbetiae_contig1023.277.1|Name=mRNA_L-elsbetiae_contig1023.277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1837bp|location=Sequence derived from alignment at L-elsbetiae_contig1023:1411..3247+ (Laminarionema elsbetiae ELsaHSoW15)
GTGCATATGCAACTTTGCCCGCAGCGCAAAAGGCGAACGCGGACCACTGC
AAGTACAGGGCTGCGATCGCTAAATTCCACGAAGACGCGGCGGCAGGGCG
GAGAAAGCGGAGCCGATAACGGCACTCTTGTCTCGACAGCCACTTCGGGG
GCAAATCAACATCAACACCGCTCGACCGCGCCTCAAACAGCTCGCGAACA
CACCGAAGAACCCCCCCTCCAGGCACCACCACCTCATGATGTCAAAAACA
CTGCGTCTAGGCAGGGACTTGACGGCGACAAGGATAGCGCCAGCTGCAGC
GAACGCCTCGGGGATGACCGTGCACAAAATGAAAATGAAGATTGCATCGT
CGTGATCACCGCAAGCGACGGACGAGTAGCCTGCACAAACTGCCAGCGTT
GGTTTTCCTCGGACAGGGTAGGCGTGCATCAAAATATATGCAAGCGGGTC
AACCCGCCCTCCGCTCGAGACACAAGCAAAAGGGAACAGGGCGGGACAGC
TAGCAGCAAGAAGGCCAAATTTACATCTTCCCGTGTCGAGTCTCGCCGGC
GGAAATCAGGCCGTTCCACTGTCGGCGAAACCCATGCGGCGGCGAGGACG
CGCTGGGGGCGGGGGCGCTCAGTGGGTGGAGAAAAAAGCAGCATCAAGGA
TCACCATCCCATTGATGATGCACGAGACATAATGGTGATTAAGTAGCACG
CGTCTAGGCGGGCATGAGTCGGCAGGTAGTTTTGATTGCAAAGGCAACCG
CTCTTGCCTGCACGAAATATGTTCAAAACGGCCATGTGCGCTGGCCGTTG
TAAAGTTTCGCATGTAAATTGTTGCGATGGTTACACTTCGGATGTGGTGT
CCACGTCAGCAATTTCGAGCCCACCTGCACTCACCATAGATGCAGCAGAC
GGCGGGCCTTTCGTCCTCTTCTCGCTCACCTTTCCAGCTGCAGCCTTCAT
ACCTGTCTGCCTGTTTACTTGCCTGTCGGTCTGTCTGTCTACGTACCTTA
GGTCTTCAATTATCCCAACGCCGTTTGTGAGGCTTACCTTTTCCATAATA
GTCGTCTCGTCCCACACCATACATTCGTTTCGGTATGGCGCCACTGAGAC
TCTGGCTCGTTGCTCACAGCCTGAATCAACTACCCGCGCTGCTTGCCCTT
GTTCCGCCTGGCCCACACCGACAGTACTTTGGCAGCAACGATCGAGTGCG
GAGGGGATCGCCCCCCGCCCAAACCCAGGTGGACACCACGGCGACCCCAA
GAGCACCACCACGAGGAAACAACTCCCCTTCATCATGCGCACAGTACCGA
GGAAGTTCCTTCAGCAGCAGCAGCAGCAGCCTCGGCCTGGAGGAATCATG
CCCCCCCCAGACCGAGAAGCAGCGCCAGCAGCGAAAAAAACAACATCGCC
GACGGAGAGTATCGCCGCGCTGGAAGGAGAGCTGGGACAATCACCGGCAC
GCTCGCCGCCCTTTCAGTGCCACGAACCCGCTGTCTTCTTCGAAGGATAT
GACGCCGTTGGCCCCGGTGGAGGGCCCCGGGAAGAGGGTTTTCGTCGGGC
GCGCCGTGTCAACGAGTTGTTCCCCTGTCAGGCTACGACGTAGCAGTGCG
AGCACCGCCGCTGCAGCAGAAGTGCGACCAGCTGGGAACGAAGGGCACGC
TCGCCGGGGTGGTGTCGCCGGCATCGGGGGCGGTGGTGGAAGTGAAGTGG
TGCTCGCGCGAAGCTCGACGGACATTTCAAGGCGAGGCGCCGCAAGCGGA
GGAGTTGGGACCGAGAGACTATCAGGCGGGATGGTGGGGTTCTTCTCCCC
TTCCGGGGATAGGATGCGGGTTCGACTGCTCAAGTAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1023:1411..3247+ >mRNA_L-elsbetiae_contig1023.277.1 ID=mRNA_L-elsbetiae_contig1023.277.1|Name=mRNA_L-elsbetiae_contig1023.277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2682bp|location=Sequence derived from alignment at L-elsbetiae_contig1023:1411..3247+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAACTTTGCCCGCAGCGCAAAAGGCGAACGCGGACCACTGCAAGTAC
AGGGCTGCGATCGCTAAATTCCACGAAGACGCGGCGGCAGGGCGGAGAAA
GCGGAGCCGATAACGGCACTCTTGTCTCGACAGCCACTTCGGGGGCAAAT
CAACATCAACACCGCTCGACCGCGCCTCAAACAGCTCGCGAACACACCGA
AGAACCCCCCCTCCAGGCACCACCACCTCATGATGTCAAAAACACTGCGT
CTAGGCAGGGACTTGACGGCGACAAGGATAGCGCCAGCTGCAGCGAACGC
CTCGGGGATGACCGTGCACAAAATGAAAATGAAGATTGCATCGTCGTGAT
CACCGCAAGCGACGGACGAGTAGCCTGCACAAACTGCCAGCGTTGGTTTT
CCTCGGACAGGGTAGGCGTGCATCAAAATATATGCAAGCGGGTCAACCCG
CCCTCCGCTCGAGACACAAGCAAAAGGGAACAGGGCGGGACAGCTAGCAG
CAAGAAGGCCAAATTTACATCTTCCCGTGTCGAGTCTCGCCGGCGGAAAT
CAGGCCGTTCCACTGTCGGCGAAACCCATGCGGCGGCGAGGACGCGCTGG
GGGCGGGGGCGCTCAGTGGGTGGAGAAAAAAGCAGCATCAAGGATCACCA
TCCCATTGATGATGCACGAGACATAATGATGCAACTTTGCCCGCAGCGCA
AAAGGCGAACGCGGACCACTGCAAGTACAGGGCTGCGATCGCTAAATTCC
ACGAAGACGCGGCGGCAGGGCGGAGAAAGCGGAGCCGATAACGGCACTCT
TGTCTCGACAGCCACTTCGGGGGCAAATCAACATCAACACCGCTCGACCG
CGCCTCAAACAGCTCGCGAACACACCGAAGAACCCCCCCTCCAGGCACCA
CCACCTCATGATGTCAAAAACACTGCGTCTAGGCAGGGACTTGACGGCGA
CAAGGATAGCGCCAGCTGCAGCGAACGCCTCGGGGATGACCGTGCACAAA
ATGAAAATGAAGATTGCATCGTCGTGATCACCGCAAGCGACGGACGAGTA
GCCTGCACAAACTGCCAGCGTTGGTTTTCCTCGGACAGGGTAGGCGTGCA
TCAAAATATATGCAAGCGGGTCAACCCGCCCTCCGCTCGAGACACAAGCA
AAAGGGAACAGGGCGGGACAGCTAGCAGCAAGAAGGCCAAATTTACATCT
TCCCGTGTCGAGTCTCGCCGGCGGAAATCAGGCCGTTCCACTGTCGGCGA
AACCCATGCGGCGGCGAGGACGCGCTGGGGGCGGGGGCGCTCAGTGGGTG
GAGAAAAAAGCAGCATCAAGGATCACCATCCCATTGATGATGCACGAGAC
ATAATGTACTTTGGCAGCAACGATCGAGTGCGGAGGGGATCGCCCCCCGC
CCAAACCCAGGTGGACACCACGGCGACCCCAAGAGCACCACCACGAGGAA
ACAACTCCCCTTCATCATGCGCACAGTACCGAGGAAGTTCCTTCAGCAGC
AGCAGCAGCAGCCTCGGCCTGGAGGAATCATGCCCCCCCCAGACCGAGAA
GCAGCGCCAGCAGCGAAAAAAACAACATCGCCGACGGAGAGTATCGCCGC
GCTGGAAGGAGAGCTGGGACAATCACCGGCACGCTCGCCGCCCTTTCAGT
GCCACGAACCCGCTGTCTTCTTCGAAGGATATGACGCCGTTGGCCCCGGT
GGAGGGCCCCGGGAAGAGGGTTTTCGTCGGGCGCGCCGTGTCAACGAGTT
GTTCCCCTGTCAGGCTACGACGTAGCAGTGCGAGCACCGCCGCTGCAGCA
GAAGTGCGACCAGCTGGGAACGAAGGGCACGCTCGCCGGGGTGGTGTCGC
CGGCATCGGGGGCGGTGGTGGAAGTGAAGTGGTGCTCGCGCGAAGCTCGA
CGGACATTTCAAGGCGAGGCGCCGCAAGCGGAGGAGTTGGGACCGAGAGA
CTATCAGGCGGGATGGTGGGGTTCTTCTCCCCTTCCGGGGATAGGATGCG
GGTTCGACTGCTCAAGTAGTACTTTGGCAGCAACGATCGAGTGCGGAGGG
GATCGCCCCCCGCCCAAACCCAGGTGGACACCACGGCGACCCCAAGAGCA
CCACCACGAGGAAACAACTCCCCTTCATCATGCGCACAGTACCGAGGAAG
TTCCTTCAGCAGCAGCAGCAGCAGCCTCGGCCTGGAGGAATCATGCCCCC
CCCAGACCGAGAAGCAGCGCCAGCAGCGAAAAAAACAACATCGCCGACGG
AGAGTATCGCCGCGCTGGAAGGAGAGCTGGGACAATCACCGGCACGCTCG
CCGCCCTTTCAGTGCCACGAACCCGCTGTCTTCTTCGAAGGATATGACGC
CGTTGGCCCCGGTGGAGGGCCCCGGGAAGAGGGTTTTCGTCGGGCGCGCC
GTGTCAACGAGTTGTTCCCCTGTCAGGCTACGACGTAGCAGTGCGAGCAC
CGCCGCTGCAGCAGAAGTGCGACCAGCTGGGAACGAAGGGCACGCTCGCC
GGGGTGGTGTCGCCGGCATCGGGGGCGGTGGTGGAAGTGAAGTGGTGCTC
GCGCGAAGCTCGACGGACATTTCAAGGCGAGGCGCCGCAAGCGGAGGAGT
TGGGACCGAGAGACTATCAGGCGGGATGGTGGGGTTCTTCTCCCCTTCCG
GGGATAGGATGCGGGTTCGACTGCTCAAGTAG back to top
|