mRNA_L-elsbetiae_contig10225.274.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: D7FQI5_ECTSI (PseudoU_synth_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQI5_ECTSI) HSP 1 Score: 736 bits (1900), Expect = 3.160e-258 Identity = 390/599 (65.11%), Postives = 433/599 (72.29%), Query Frame = 1 Query: 1 VPMEGVRAWLDEINAALDRIFDG--RGAVRVLGRMVVPPNFHAEIHAKRRRYEYLIPAWMLDETVQGPWSAEQRAGKDIIPLLRRLRGKGLKPFGHCSGDHSGRRRRCPLWHNFSATALPHSPSSLRRLYRFFAMDVVQSS----------RRGEDYVLLSINGDAFMSQQVRGMVALAVAGARGLVSAADIAACIDPKRQEDLLPVPLAPAVPCWLAEVGYTQWQTRLGVKGGGLCMSPGAEQRACLPLEGWSDEASRSKAADFRRSVVDSAALWWEDRQGGVSWLREVLVPGALKLRRELDASEERAA-ASGDNA---------AVGEXXXXXXXXXXLGGATSKLSAEEISSLEEAPAPYLKVLELLREADASGSWPYSTASRSLVILGDEGDRAD----------------VGAGPDAGLTRRRAET----AEDGGDLDAGDAAXXXXXQRVGAGGSG---------SFTLGSFPPPCPPPRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGCEGIAG 1644 VP EG+R WLD+ NAALD DG R A+R+LGRM VP FHAEIHAKRRRYEYL+PAWMLDET +GPW R +++IPLLRRLR +GL+PFGHC+G+H G RRRCPLWHNFSA+ALPHSPSSLRRL+RF+AM+V+QSS G DYV LSINGDAFMSQQVRGMVALAVAGARGL+SA IAA IDP RQEDLLPVPLAPA PC LAEVGY+ WQ RLGV G G+CMSPGAEQR C PLEGWSDEASRS+ A FRR V+DSAA WWE+R GGV WL++VL PGA+KL RE+ S+ RA GD + G G + LSAE++SSLEEAP Y KVL LLREA ASG WP STASRSLVI G+ GDRAD G D+ T E A G+ +A A Q SFTLG+FPPPCPPPRGNRLF LARAAFELEAALLP+RPPSTTIAVNRNA+FKPHVDSG+GAGQS+SLIVGLGDY RGELVVEGEE DIRY PLEFNGWTQRHWTRPF GERYSLVWFTPKGCEGI+G Sbjct: 194 VPQEGIRKWLDDTNAALDNS-DGNAREAIRLLGRMAVPSTFHAEIHAKRRRYEYLLPAWMLDETAEGPWEGPPRGQENLIPLLRRLRARGLRPFGHCNGEHDGTRRRCPLWHNFSASALPHSPSSLRRLFRFYAMEVIQSSPSSSQGGDAGASGADYVCLSINGDAFMSQQVRGMVALAVAGARGLISAEGIAATIDPTRQEDLLPVPLAPAAPCSLAEVGYSGWQMRLGVGGQGVCMSPGAEQRGCRPLEGWSDEASRSEGARFRRQVLDSAARWWEERDGGVGWLKDVLQPGAVKLGREVQVSDMRAGDLEGDRSNEGRGEEDGCGGRSGSRDESRRGAGADGAPLSAEDLSSLEEAPVLYAKVLGLLREASASGQWPTSTASRSLVIFGERGDRADEMCSGTGRSKQTDLAGCAKGRDSDKTALAEEAPPAMARTVGEENASAATEPDGQQXXXXXXXXXXXXXXXXXSFTLGAFPPPCPPPRGNRLFAELARAAFELEAALLPERPPSTTIAVNRNARFKPHVDSGSGAGQSRSLIVGLGDYVRGELVVEGEEADIRYRPLEFNGWTQRHWTRPFSGERYSLVWFTPKGCEGISG 791
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: B7FNZ7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FNZ7_PHATC) HSP 1 Score: 282 bits (721), Expect = 3.430e-82 Identity = 180/477 (37.74%), Postives = 257/477 (53.88%), Query Frame = 1 Query: 289 GDHSGRRRRCPLWHNFSATALPHSPSSLRRLYRFF-------------AMDVVQSSRRGEDYVLLSINGDAFMSQQVRGMVALAVAGARGLVSAADIAACIDPKRQEDLLPVPLAPAVPCWLAEVGYTQWQTRLGVKGGGLCMSPGAEQRACLPLEGWSDEASRSKAADFRRSV-VDSAALWW---EDRQGGV----SWLREVLVPGALKLRRELDASEERAAASGDNAAVGEXXXXXXXXXXLGGATSKLSAEEISSLEEA-PAPYLKVLELLREADASGSWPYSTASRSLVILGD--EGDRADVGAGPDAGLTRRRAETAEDGGDLDAGDAAXXXXXQRVGAGGSGSFTLGSFP-PPCPPPRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGCEGIAG 1644 G + RR+R +HNF+ + L H + RRL R + + + Q++ +++LS++GD F++ QV +V L +A ++G++ D C+ + L+ P AP + E Y + G C + +++ + +GW+D+ + K +++ V D+AA W ED++G + W +EVL P A++ + +L + + N GGA ++ I+S+E A P+ + KVL LR+AD SG WP +T R LV++ EG ++G A + D + G SGSF++G+ P C P+GN LFP L RAAFELE AL P+R PS+TIA+NRNAQF+PH DSGAGAGQS SLIVGLG Y GELVVEGE+ DIRY LEFNGW QRHWT PF GER+SLVWFTPKGCEG+ G Sbjct: 336 GQNVLRRKR---YHNFTPSVLAHDFLAYRRLDRIYHRATLRFSQSTKGVLTLSQNAETKRPFLVLSLSGDIFLTGQVCRIVGLFIALSKGVIDE-DFCDCVFDEAYPHLVSTPAAPTTGMYAGEAYYMSME--------GKCKAVLTPRKSTIFQDGWNDDKTLQKVYSWQQRVRADAAAAWMALGEDKEGRLLAERDWTKEVLEPWAIRAKEQLKEYRQWKMSKKTNVL----------HATTGGAETRALEPPIASIETAIPSLFEKVLRYLRDADKSGFWPSTTPKRQLVMVSTVVEGKSESCDNPFESGAMPASLSVAHMKARSNKIDKSSAYIYVEGEGGASGSFSVGAMPGEACTQPKGNELFPELMRAAFELEIALCPNREPSSTIAINRNAQFRPHTDSGAGAGQSSSLIVGLGSYSGGELVVEGEQKDIRYRALEFNGWKQRHWTMPFHGERFSLVWFTPKGCEGVRG 790
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: A0A835YK11_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK11_9STRA) HSP 1 Score: 277 bits (709), Expect = 3.820e-81 Identity = 227/623 (36.44%), Postives = 288/623 (46.23%), Query Frame = 1 Query: 16 VRAWLDEINAALDRIFDGRGAVRVLGRMVVPPNFHAEIHAKRRRYEYLIPAWMLDETVQGPWSA------EQRA--GK-DIIPLLRRLRGKGLKPFGHCSGDHSGRRRRCPLWHNFSATALPHSPSSLRRLYRFFAMDVVQSSRRGEDYVLLSINGDAFMSQQVRGMVALAVAGARGLVSAADIAACIDPKRQEDLLPVPLAPAVPCWLAEVGYTQWQT-RLGVK---------------------------GGGLCMSPGAEQRACLPLEGWSDEASRSKAADFRRSVVDSAALWWEDRQGGVSWLREVLVPGALKLRRELDASEERAAASGDNAAVGEXXXXXXXXXXLGGATSKLSAEEISSLEEAPAPYLKVLELLREADASGSWPYSTASRSLVI-------LGDEGDRADVGAGPDAG---LTRRRAETAEDGGDLDAGDAAXXXXXQ--------------------------------------RVGAGGSGSFTLGSFPPPCPPPRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGC 1629 +R L ++NA L R VRVLG M V +FHAE A+RRRY+YL+P +L S+ +QRA G+ D+ +++R++ + +G D GRR C HNF A+ P P + RRL+RF D ++ RG V+LS+ +AF+SQQ R MV L +A ARG + I A +D + E + P APA LAEVGY+ + + G+ W E+ G W+ L LR L +R S A G LS E ++L AP Y +VL LLREADASG WP S+ R VI +G+E + + A L + T+ G + AG + XXXXX R G GSF++G P C PRGN LFP L RAAFELE L+P+R PS+TIA+NR+AQF+PH DSGAG+GQS SLIVGLGDY GELVVEG E DIRY PLEFNGWTQRHWT PF GERYSLVWFTPK Sbjct: 113 LRGSLSDVNARLPR------GVRVLGHMEVGVDFHAERMARRRRYDYLLPLSLLRGAADSGGSSAHSSDQQQRAECGEGDVAAVMQRIKPLLRRFYG--GTDQRGRRVCC---HNFCASTAPTEPIATRRLFRFKHTD--SAALRGRACVVLSVTCNAFLSQQARRMVGLLIACARGALPPDAIDAALDAQYTEHMAVAPAAPACGVHLAEVGYSPAHSDKFGLSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEEEEHWGSKWVDGPLQESLPALRAFL----QRWRDSKQLAQSGPPQPPL-----------SLSPAEAAALPPAPEVYARVLRLLREADASGLWPDSSKGRQTVIANGAAAAVGEEDESEEQVPAEAAAVELLVPAQLATSGPGATVAAGISTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAG----GSFSVGRMPATCAVPRGNDLFPELMRAAFELERVLMPNRTPSSTIAINRHAQFRPHKDSGAGSGQSLSLIVGLGDYAGGELVVEGVECDIRYRPLEFNGWTQRHWTLPFRGERYSLVWFTPKSA 703
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: A0A1Z5JI73_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JI73_FISSO) HSP 1 Score: 270 bits (690), Expect = 2.330e-78 Identity = 182/472 (38.56%), Postives = 245/472 (51.91%), Query Frame = 1 Query: 304 RRRRCPLWHNFSATALPHSPSSLRRLYRFFAMDVVQSSRRGEDYVLLSINGDAFMSQQVRGMVALAVAGARGLVSAADIAACIDPKRQEDLLPVPLAPAVPCWLAEVGYTQWQTRLGVKGGGLCMSPGAEQRACLPLEGWSDEASRSKAADFRRSVVDSAALWWE----DRQGGV----SWLREVLVPGALKLRRELDASEERAAASGDNAAVGEXXXXXXXXXXLGGATSKLSAEEISSL--------EEAPAPYLKVLELLREADASGSWPYSTASRSLVILGDEGDRADVGAGPDAGLTRRRAETAEDGGDLDAGDAAXXXXXQRVGA--------GGSGSFTLGSFPPP-CPPPRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGCEGIAG 1644 +RRR +HNF+ + + H + RR+ R + ++ +++LS+ GD F+ QV ++ + +A ARGLV D+ C+ ++ L+P P AP++ E Y W+ ++ +SP R EGW+D + + ++ V + A W D G + W VL P + + ++L+ + AS S+ SA E+S L PA + KVL LREADASG WP +T R +V++ D A + L A DA A QR A G SGSF++G+ P C P+GN LFP L +AAFELE L PDR PS+TIA+NRNAQF+PH DSGAGAGQS SLIVGLG Y GELVVEGE+ DIRY +EFNGWTQRHWT PF GER+SLVWFTPKGCEG+ G Sbjct: 272 KRRR---FHNFTPSCMAHEYVAYRRMDRVYHRATIRFDGERRPFLVLSLTGDLFLHGQVCRVIGVFLALARGLVDQ-DMVECLFDEKYGSLIPTPAAPSMGMIAGEAYYVNWEGKVKA-----VLSPRIADRFS---EGWNDANTIKRYEYWKDLVRERVARAWLTGGFDEDGRLLAEREWTETVLEPWSQRANQQLEEYRQWKQASL--------------------VVSRKSAAEVSELIPSLNLVDPTVPAVFEKVLRCLREADASGLWPSTTPKRQMVMISS---LTDPNATDEDFLPNSLA---------DAHGKAKNNKGQRSSAYIFAEGEGGASGSFSVGAMPGDRCIQPKGNSLFPELMKAAFELEMVLRPDREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYAGGELVVEGEKKDIRYKAVEFNGWTQRHWTMPFKGERFSLVWFTPKGCEGVHG 699
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: A0A7S2LQZ1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQZ1_9STRA) HSP 1 Score: 263 bits (671), Expect = 2.110e-77 Identity = 179/468 (38.25%), Postives = 237/468 (50.64%), Query Frame = 1 Query: 304 RRRRCPLWHNFSATALPHSPSSLRRLYRFFAMDVVQSSRRGED------------YVLLSINGDAFMSQQVRGMVALAVAGARGLVSAADIAACIDPKRQEDLLPVPLAPAVPCWLAEVGYTQWQTRLGVKGGGLCMSPGAEQRACLPLEGWSDEASRSKAADFRRSVV-DSAALWWEDRQGGVS-------WLREVLVPGALKLRRELDASEERAAASGDNAAVGEXXXXXXXXXXLGGATSKLSAEEISSLEEAPAPYLKVLELLREADASGSWPYSTASRSLVILGDEGDRADVGAGPDAGLTRRRAETAEDGGDLDAGDAAXXXXXQRVGAGG-SGSFTLGSFPPPCPPPRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGCEGIAG 1644 RR+R +HNFS L H + RRL R + ++ +D +V+ S+ GD F+ QQ R ++ L +A RG + DI + + L+ PLAP++ E Y ++ RL M A + +G++DE + + SV+ D A W+ D G WL VL P A K R ELD A G + +S P Y+K L+LLREADA+G+WP ++A R LV+L D + LT R + ++ + G GG SGSF++G P P+GN FP L +AAFELE AL PDR PS+TIA+NRNAQF+PH D GAGAGQS SLIV +G++ GEL+VEGE+ DIRYN +EFNGW QRHWT PF GERYSLVWFTPKGCEG+ G Sbjct: 98 RRKR---FHNFSPNVLAHDFLAYRRLDRIYHRGTIRLDSTTQDGSESVLHTGSRPFVVFSLTGDLFLYQQARRVIGLLIAILRGCIDI-DILDLVFDENYAHLVSAPLAPSLGLMQGEATYMTYEGRLN-------MVLNARRTRAFS-KGFNDEDVVTSVEQWEESVLKDIAKGWYLDGTGANGQLNAERDWLETVLYPWAKKARDELDNYRRWKA----------------------GELASSLPPVVSVGTSVPDVYVKCLQLLREADANGAWPDTSAQRQLVMLSTPNDESLT-----TSLTAARMAAKTNN-----SESRSCAYSFKEGEGGASGSFSVGIMPDRSSQPKGNLQFPQLVKAAFELERALFPDREPSSTIAINRNAQFRPHTDKGAGAGQSTSLIVAMGNFVGGELMVEGEKKDIRYNGIEFNGWKQRHWTLPFKGERYSLVWFTPKGCEGMRG 521
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: A0A7S2Y9F9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9F9_9STRA) HSP 1 Score: 261 bits (666), Expect = 1.510e-76 Identity = 184/495 (37.17%), Postives = 251/495 (50.71%), Query Frame = 1 Query: 304 RRRRCPLWHNFSATALPHSPSSLRRLYRFFAMDVVQ--------------------------SSRRGEDYVLLSINGDAFMSQQVRGMVALAVAGARGLVSAADIAACIDPKRQEDLLPVPLAPAVPCWLAEVGYTQWQTRLGVKGGGLCMSPGAEQRACLPLEGWSDEASRSKAADFRRSVVDSAALWW------EDRQGG-----VSWLREVLVPGALKLRRELDASEERAAASGDNAAVGEXXXXXXXXXXLGGATSKLSAEEI---SSLEEA-PAPYLKVLELLREADASGSWPYSTASRSLVILGDEGDRADVG----AGPDAGLTRRRAETAEDGGDLDAGDAAXXXXXQRVGAGG-SGSFTLGSFP-PPCPP-PRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGCEGIAG 1644 RRRR +HNF+ + + H S RRL R ++ +S++ +++LS++ D F++ QV +V L VA ARGL+ D C+ + L+P P AP + + + Y W+ + +SP R P GW+D A+ + ++ V A W +D G W +L+P A K R+ L + + G + S++ + I SSL+ P + +VL LL+EAD SGSWP +T R LV++ + D G + P + ++ + D G GG SGSF++GS P CP P+ N LFP L +AAFELE AL PDR PS+TIA+NRNAQF+PH DSG+GAGQS SLIVG+G Y GELVVEGE+ DIRY +EFNGWTQRHWT PF+GERYSLVWFTPKGCEGI G Sbjct: 64 RRRR---YHNFTPSVMAHEYLSYRRLDRVHHRATLRFDPRDNATTACFSENTSVHNPQQQHSNSQQQRPFMVLSLSADLFLTGQVPRVVGLFVALARGLIDK-DFVECVFDENYLHLVPTPPAPLIGMYSKDAFYMSWEGKAK-----SVLSPRQTDR--YP-GGWNDTATLQRVEAWQARVRQHAVQQWNAKGDNQDASNGRLVLEQEWTESILLPWAEKARKHLQDYRQWKSLQGKTPLSDS-------------SISQMVSNNIISNSSLDPTVPKVFQRVLSLLQEADKSGSWPSTTPKRQLVMVSNHVDSGKDGDKDTSNPFQSYQQPKSLSVAHMKAKSNRDIRSSAYEFEEGQGGASGSFSVGSMPGEQCPQQPKANSLFPQLMKAAFELEVALCPDREPSSTIAINRNAQFRPHTDSGSGAGQSTSLIVGIGTYSGGELVVEGEQKDIRYKAIEFNGWTQRHWTMPFVGERYSLVWFTPKGCEGIRG 533
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: B8C5S1_THAPS (PseudoU_synth_1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5S1_THAPS) HSP 1 Score: 266 bits (680), Expect = 2.770e-76 Identity = 182/481 (37.84%), Postives = 253/481 (52.60%), Query Frame = 1 Query: 304 RRRRCPLWHNFSATALPHSPSSLRRLYRFFAMDVVQSSR----------------------RGEDYVLLSINGDAFMSQQVRGMVALAVAGARGLVSAADIAACIDPKRQEDLLPVPLAPAVPCWLAEVGYTQWQTRLGVKGGGLCMSPGAEQRACLPLE-GWSDEASRSKAADFRRSVV-DSAALW-WED--RQGGVS----WLREVLVPGALKLRRELDASEERAAASGDNAAVGEXXXXXXXXXXLGGATSKLSAEEISSLEE-APAPYLKVLELLREADASGSWPYSTASRSLVILGDEGDRADVGAGPDA-GLTRRRAETAEDGGDLDAGDAAXXXXXQRVGAGGSGSFTLGSFPP-PCPPPRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGCEGIAG 1644 RR+R +HNFS L H + RRL R + V+ + +++ S+ GD F+ +Q R ++ L +A RG++ + +I C+ + +L+P P AP+ E Y W+ RL +SP R C + GW++E S + S+V D AA W W + G ++ WL +VL P A K R LD A +++A+ G ++ +SS++ P Y KVL LR AD+SG+WP +T R LV++ + V A + +++ + D G+ G SGSF++G+ P C P+GN LFP L +AAFELE AL P R PS+TIA+NRNAQF+PH D+GAGAGQS SLIVGLGDY GEL+VEG + DIRYNP+EFNGW QRHWT PF GER+SLVWFTPKGC+G+ G Sbjct: 348 RRKR---FHNFSPNTLAHDYLAYRRLDRIYHRGTVRLEDSPSTGVVEEQPSAPSNESTAIVKNRPFLVFSLTGDVFLHEQARRVIGLLIAICRGVIDS-EIIECMFDEEYANLVPAPPAPSCGLVAGESTYMTWEGRLKT-----ILSP----RRCDRYDKGWNEEEVVSAVELWEESLVRDVAAGWLWNGVTKDGRLNAENYWLDDVLNPWATKTRVILDDYRRWKTAKEESSAID-------------GTLAESLLPPVSSIDTMVPELYAKVLYHLRLADSSGNWPTTTPKRQLVMVSTSNGESQVKPLSVAMHVAKKKNDLRSDAYTFQEGEG-----------GASGSFSVGAMPGGQCEQPKGNILFPELVKAAFELEVALCPGREPSSTIAINRNAQFRPHTDNGAGAGQSTSLIVGLGDYVGGELMVEGAKKDIRYNPIEFNGWKQRHWTLPFRGERFSLVWFTPKGCDGVRG 791
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: A0A448ZRN1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRN1_9STRA) HSP 1 Score: 244 bits (624), Expect = 3.630e-68 Identity = 167/461 (36.23%), Postives = 234/461 (50.76%), Query Frame = 1 Query: 325 WHNFSATALPHSPSSLRRLYRFFAMDVV------QSSRRGEDYVLLSINGDAFMSQQVRGMVALAVAGARGLVSAADIAACIDPKRQEDLLPVPLAPAVPCWLAEVGYTQWQTRLGVKGGGLCMSPGAEQRACLPLEGWSDEASRSKAADFRRSVVDSAALWWE----DRQGGV----SWLREVLVPGALKLRREL-DASEERAAASGDNAAVGEXXXXXXXXXXLGGATSKLSAEEISSLEEA-PAPYLKVLELLREADASGSWPYSTASRSLVILGDEGDRADVGAGPD----AGLTRRRAETAEDGGDLDAGDAAXXXXXQRVGAGGSGSFTLGSFPP-PCPPPRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGCEGIAG 1644 +HNF+ + H + RRL R + + +S + Y++LS++GD F++ Q ++ + VA GL+ + C+ + L+P P AP +EV Y + + +S R EGW++EA+ + D++ V W+ D QG + W +VL+P A K + L D + + + E A +I ++ P Y VL LR+ DASG WP +++ R LV++ + G G + A L +R E G +A + GA SGSF++G P P+ N +FP L +AAF LE L PDR PS+TIAVNRNAQF+PH DSGAGAGQS SLIVGLG Y GEL+VEG++ DIRY +EF+GW QRHWT PF GERYSLVWFTPKGCEG+ G Sbjct: 371 YHNFTEKLMAHEYLTYRRLDRIYHRSTLKFPMESESKMKTTSYMILSMSGDMFLTGQTSRLIGVIVALGNGLIDR-EFIDCVFDENYPHLVPTPPAPHFGVVSSEVQYANQEGKTR-----RILSARMSDRY---TEGWNNEATIRRVKDWQNEVYKYVDSKWKKDGRDEQGRLRSEQEWTEKVLLPWAEKAKEHLEDYKRWKKKQHQSSHDLSESSAKHDSHTESSYAPESSRIPQIEPIDPTVPEVYKDVLHHLRKLDASGEWPMTSSKRQLVMVSSSDGVKENGKGTESLALACLKAKRNELT--------GSSAYSFAEGQGGA--SGSFSVGIMPGGDKKQPKANSMFPDLVKAAFLLETKLFPDREPSSTIAVNRNAQFRPHTDSGAGAGQSTSLIVGLGTYGGGELMVEGDKHDIRYKAIEFDGWKQRHWTMPFKGERYSLVWFTPKGCEGMKG 812
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: A0A7S4ELS6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELS6_9STRA) HSP 1 Score: 244 bits (624), Expect = 4.310e-68 Identity = 168/472 (35.59%), Postives = 243/472 (51.48%), Query Frame = 1 Query: 313 RCPLWHNFSATALPHSPSSLRRLYRFFAM----------DVVQSSRRGEDYVLLSINGDAFMSQQVRGMVALAVAGARGLVSAADIAACIDPKRQEDLLPVPLAPAVPCWLAEVGYTQWQTRLGVKGGGLCMSPGAEQRACLPLEGWSDEASRSKAADFRRSVVDSAALWWE----DRQGGVS----WLREVLVPGALKLRRELDASEERAAASGDNAAVGEXXXXXXXXXXLGGATSKLSAE-----EISSLEE-APAPYLKVLELLREADASGSWPYSTASRSLVILGDE--GDRADVGAGPDA-GLTRRRAETAEDGGDLDAGDAAXXXXXQRVGAGGSGSFTLGSFPPPCPP-PRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGCEGIAG 1644 +C +HNF+ + H + RR+ R + + +S+ Y++LS++GD F++ Q +V + VA G++ + C+ + L+P P AP +EV Y + R +SP R EGW +E + + D+++ V W+ D G + W VL+P A K +R L+ + + ++ + GA S + E +I ++ AP Y VL LR+ D SG WP +++ R +V++ + GD D +GP + + +A+ E A + GA SGSF++G P P+ N +FP L RAAFELE L P+R PS+TIA+NRNAQF+PH DSGAGAGQS SLIVGLG Y GEL+VEG++ DIRY LEF+GW QRHWT PF GER+SLVWFTPKGCEG+ G Sbjct: 370 KCRRYHNFTEKLMAHDYLTSRRVDRIYHRATLKFPMKNCEAPESTTENTTYMVLSMSGDVFLTGQACRLVGVIVALGNGMIDP-EFIDCVFDEDYPHLIPTPPAPHYGMVSSEVHYANQEGRTK-----RILSPRMSTRY---KEGWCNETTIRRMKDWQKEVYKFVDSKWKKNGRDESGRLKSEQEWTENVLLPWADKAKRHLE--DYKRWKKNQEQSLTKPNFSLASTKEASGAASSSAPELPPAPQIEPIDPTAPDIYHDVLSHLRKLDKSGEWPSTSSKRQIVMVSNSATGDLNDKNSGPGSLAIACAKAKRNEQ-----TKSCAYSFVEGQGGA--SGSFSVGIMPGGLQKQPKANSMFPDLVRAAFELETKLFPEREPSSTIAINRNAQFRPHTDSGAGAGQSTSLIVGLGTYDGGELMVEGDQHDIRYKALEFDGWKQRHWTMPFNGERFSLVWFTPKGCEGMKG 823
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Match: A0A7S2SC44_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SC44_9STRA) HSP 1 Score: 224 bits (572), Expect = 1.170e-66 Identity = 117/214 (54.67%), Postives = 145/214 (67.76%), Query Frame = 1 Query: 1006 EAPAPYLKVLELLREADASGSWPYSTASRSLVILGDEGDRADVGAGPDAGLTRRRAETAEDGGDLDAGDAAXXXXXQRVGAGGSGSFTLGSFPP-PCPPPRGNRLFPALARAAFELEAALLPDRPPSTTIAVNRNAQFKPHVDSGAGAGQSKSLIVGLGDYRRGELVVEGEEVDIRYNPLEFNGWTQRHWTRPFLGERYSLVWFTPKGCEGIAG 1644 + P Y KVL LLR+AD S WP +T R LV++ D + A L + ++ ++G A + G SGSF++G+ P C P+GN LFP L +AAFELE AL P+R PS+TIAVNRNAQF+PHVD+GAGAGQS SLIVG+G Y GEL+VEG++ DIRY +EFNGWTQRHWT PF+GERYSLVWFTPKGCEG+ G Sbjct: 17 KVPLLYEKVLNLLRKADTSELWPTTTPKRQLVMISTNEDEKENDTCLSAALIKAQS---------NSGTRASAYTFKEGQGGASGSFSVGAMPGVQCEQPKGNTLFPELMKAAFELEIALCPNREPSSTIAVNRNAQFRPHVDNGAGAGQSTSLIVGMGTYVGGELMVEGKKHDIRYEAIEFNGWTQRHWTLPFVGERYSLVWFTPKGCEGVHG 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10225.274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10225.274.1 >prot_L-elsbetiae_contig10225.274.1 ID=prot_L-elsbetiae_contig10225.274.1|Name=mRNA_L-elsbetiae_contig10225.274.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=546bp MEGVRAWLDEINAALDRIFDGRGAVRVLGRMVVPPNFHAEIHAKRRRYEYback to top mRNA from alignment at L-elsbetiae_contig10225:1001..3068+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10225.274.1 ID=mRNA_L-elsbetiae_contig10225.274.1|Name=mRNA_L-elsbetiae_contig10225.274.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2068bp|location=Sequence derived from alignment at L-elsbetiae_contig10225:1001..3068+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10225:1001..3068+ >mRNA_L-elsbetiae_contig10225.274.1 ID=mRNA_L-elsbetiae_contig10225.274.1|Name=mRNA_L-elsbetiae_contig10225.274.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3276bp|location=Sequence derived from alignment at L-elsbetiae_contig10225:1001..3068+ (Laminarionema elsbetiae ELsaHSoW15)back to top |