mRNA_L-elsbetiae_contig10215.262.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10215.262.1
Unique NamemRNA_L-elsbetiae_contig10215.262.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: A0A6H5KZU9_9PHAE (Protein O-GlcNAc transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZU9_9PHAE)

HSP 1 Score: 392 bits (1006), Expect = 5.660e-126
Identity = 190/211 (90.05%), Postives = 199/211 (94.31%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTLLPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDEQV 633
            VKCYALSANDDSVWRRKIEGESEHFCDVS LQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAP+Q       VSY+GFCGTLGADY+QYMIADE +VP ESRRFYTE +LYMPHSYFVNDHKQSARYVLDRTLLPTRA+YGVPEDRFVLCNFNQLYKMDP+IFSTWMSVLKRVP AVLWLLRFPPAGEANIRMEARKRGVR+EQ+
Sbjct:  648 VKCYALSANDDSVWRRKIEGESEHFCDVSGLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPLQ-------VSYMGFCGTLGADYMQYMIADEIIVPRESRRFYTENILYMPHSYFVNDHKQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVPNAVLWLLRFPPAGEANIRMEARKRGVREEQL 851          
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: A0A2P4Y2W6_9STRA (UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2W6_9STRA)

HSP 1 Score: 310 bits (794), Expect = 1.730e-102
Identity = 146/209 (69.86%), Postives = 169/209 (80.86%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTLLPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDE 627
            V CYA S +D S+WR++I G  EHF D+ +L NGD AR I+ DGI IL+NLNGYTKGARNEIFALQPAPVQ       VSY+GFCGTLGADYIQYM+ D T+VPPE RRF+TEK + MPHSYFVNDHKQSA+ VLD    PTRA YGVPED+FV CNFNQ+YK+DP  F+TWM++LKRVP +VLWLLRFPP  EANIR EAR RGV+D+
Sbjct:   15 VFCYATSPDDGSIWRKQISGSVEHFTDICALSNGDAARTIYVDGIHILVNLNGYTKGARNEIFALQPAPVQ-------VSYMGFCGTLGADYIQYMVGDATVVPPEYRRFFTEKQINMPHSYFVNDHKQSAQEVLDTEKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQ 216          
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: K3X4T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4T5_GLOUD)

HSP 1 Score: 307 bits (787), Expect = 3.510e-100
Identity = 143/211 (67.77%), Postives = 172/211 (81.52%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTLLPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDEQV 633
            V CY+ + +D SVWRRKI  E EHF D+S + NGD ARLIH+DGI ILINLNGYTKGARNEIFAL+PAPVQ       VSY+GFCGTLGADYIQYM+ D T+VP E RR+++EK+++MPHSYFVNDHKQSAR VLD    PTRA YGVPED+FV CNFNQ+YK+DP  F+TWM++LKRVP ++LWLLRFPP  EANIR EA+ RG++  ++
Sbjct:  125 VFCYSTTPDDGSVWRRKIASEVEHFKDISMISNGDAARLIHSDGIHILINLNGYTKGARNEIFALKPAPVQ-------VSYMGFCGTLGADYIQYMVGDATVVPKEHRRYFSEKIIHMPHSYFVNDHKQSARDVLDVEKCPTRAHYGVPEDKFVFCNFNQVYKIDPQTFTTWMNILKRVPNSILWLLRFPPIAEANIRAEAKARGIKSHRL 328          
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: A0A7S2BCC6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCC6_9STRA)

HSP 1 Score: 304 bits (779), Expect = 1.250e-97
Identity = 143/215 (66.51%), Postives = 179/215 (83.26%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPES--RRFYTEKLLYMPHSYFVNDHKQSARYVLDRT--LLPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDEQV 633
            V CYAL+++D SVWR+K+EGE+E F D+S+L + D ARLIH+DG+ +L+NLNGYTKGARNEIFAL+PAP+Q       +SY+GFCGT+GA+YIQYMIAD  ++P E   +R+Y+EK+ YMPHSYFVNDH+QS+RY+LD T     TRA YGVPED+FV CNFNQLYK+DP+IF  W SVLKRV  ++LWLLRFPPAGEANIR EARKRGV++EQ+
Sbjct:  228 VTCYALTSSDMSVWRKKVEGEAECFRDISALTHDDAARLIHSDGVHVLVNLNGYTKGARNEIFALRPAPIQ-------ISYMGFCGTMGAEYIQYMIADPHVIPREDAHQRYYSEKIAYMPHSYFVNDHRQSSRYILDETDSEQKTRADYGVPEDKFVYCNFNQLYKIDPAIFDVWCSVLKRVENSILWLLRFPPAGEANIRAEARKRGVKEEQI 435          
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: A0A3R7HUL3_9STRA (Protein O-GlcNAc transferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A3R7HUL3_9STRA)

HSP 1 Score: 311 bits (798), Expect = 3.910e-97
Identity = 148/209 (70.81%), Postives = 169/209 (80.86%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTLLPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDE 627
            V CYA S +D SVWR+KI    EHF D+ +L NGD AR IHADGI +LINLNGYTKGARNEIFALQPAPVQ       VSY+GFCGTLGADYIQYM+ D T+VPPE RR++TEK + MPHSYFVNDHKQSAR VLD    P+RA YGVPED+FV CNFNQ+YK+DP  F+TWM++LKRVP +VLWLLRFPP  EANIR EAR RGV+D+
Sbjct:  538 VFCYATSPDDGSVWRQKISNSIEHFTDICALSNGDAARTIHADGIHVLINLNGYTKGARNEIFALQPAPVQ-------VSYMGFCGTLGADYIQYMVGDATVVPPEYRRYFTEKQINMPHSYFVNDHKQSARDVLDTEKCPSRADYGVPEDKFVFCNFNQVYKIDPLTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQ 739          
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: D0NXA5_PHYIT (Protein O-GlcNAc transferase n=2 Tax=Phytophthora TaxID=4783 RepID=D0NXA5_PHYIT)

HSP 1 Score: 311 bits (798), Expect = 5.610e-97
Identity = 146/209 (69.86%), Postives = 169/209 (80.86%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTLLPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDE 627
            V CYA S +D S+WR++I G  EHF D+ +L NGD AR IHADGI +L+NLNGYTKGARNEIFALQPAPVQ       VSY+GFCGTLGADYI YM+ D T+VPPE RR++TEK + MPHSYFVNDHKQSAR VLD    PTRA YGVPED+FV CNFNQ+YK+DP  F+TWM++LKRVP +VLWLLRFPP  EANIR EAR RGV+D+
Sbjct:  602 VFCYATSPDDGSIWRKQISGSVEHFVDICALSNGDAARTIHADGIHVLVNLNGYTKGARNEIFALQPAPVQ-------VSYMGFCGTLGADYIHYMVGDATVVPPEYRRYFTEKQINMPHSYFVNDHKQSARDVLDTEKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQ 803          
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: A0A835ZDI7_9STRA (Protein O-GlcNAc transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI7_9STRA)

HSP 1 Score: 311 bits (796), Expect = 7.400e-97
Identity = 149/215 (69.30%), Postives = 173/215 (80.47%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTL----LPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDEQV 633
            V CYALSAND+SVWR+KIE E E   D+S+LQ GD ARLIHADGID+LINLNGYTKGARNEIFALQPAPVQ       V+Y+GFCGT+GAD+IQYM+AD  ++PPE+R  YTE LLYMPHSYFVNDH+QSAR+ L+         TRA YGVP+D+FV CNFNQ+YK+DP  F  WM VL+RVP ++LWLLRFPPAGEANIR EA KRGV D Q+
Sbjct:  583 VTCYALSANDNSVWRQKIEAEVEQMRDISALQPGDAARLIHADGIDVLINLNGYTKGARNEIFALQPAPVQ-------VAYMGFCGTMGADFIQYMVADREVIPPEARTHYTEALLYMPHSYFVNDHRQSARFALEAGAGGAPALTRAQYGVPDDKFVFCNFNQIYKIDPDTFDIWMRVLRRVPNSILWLLRFPPAGEANIRAEAHKRGVTDAQL 790          
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: M4BYK0_HYAAE (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYK0_HYAAE)

HSP 1 Score: 311 bits (797), Expect = 1.320e-96
Identity = 147/209 (70.33%), Postives = 169/209 (80.86%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTLLPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDE 627
            V CYA S +D S+WR++I G  EHF D+ +L NGD AR IHAD I IL+NLNGYTKGARNEIFALQPAPVQ       VSY+GFCGTLGADYIQYM+ D T+VPPE RRF+TEK + MPHSYFVNDHKQSAR VLD +  PTRA YGVPED+FV CNFNQ+YK+DP  F+TWM++LKRVP +VLWLLRFPP  EANIR EAR RG+ D+
Sbjct:  601 VFCYATSPDDGSIWRKQIAGSVEHFVDICALSNGDAARTIHADDIHILVNLNGYTKGARNEIFALQPAPVQ-------VSYMGFCGTLGADYIQYMVGDATVVPPEYRRFFTEKQINMPHSYFVNDHKQSARDVLDTSKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPDSVLWLLRFPPIAEANIRAEARARGIEDQ 802          
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: A0A0W8DU52_PHYNI (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=20 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DU52_PHYNI)

HSP 1 Score: 311 bits (796), Expect = 1.700e-96
Identity = 147/209 (70.33%), Postives = 169/209 (80.86%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTLLPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDE 627
            V CYA S +D S+WR++I    EHF D+ +L NGD AR IHADGI IL+NLNGYTKGARNEIFALQPAPVQ       VSY+GFCGTLGADYIQYM+ D T+VPPE RR++TEK + MPHSYFVNDHKQSAR VLD    PTRA YGVPED+FV CNFNQ+YK+DP  F+TWM++LKRVP +VLWLLRFPP  EANIR EAR RGV+D+
Sbjct:  596 VFCYATSPDDGSIWRKQISTSVEHFVDICALSNGDAARTIHADGIHILVNLNGYTKGARNEIFALQPAPVQ-------VSYMGFCGTLGADYIQYMVGDATVVPPEYRRYFTEKQINMPHSYFVNDHKQSARDVLDTDKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQ 797          
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Match: A0A8K1FGH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH6_PYTOL)

HSP 1 Score: 308 bits (789), Expect = 9.430e-96
Identity = 143/211 (67.77%), Postives = 173/211 (81.99%), Query Frame = 1
Query:    1 VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADETLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTLLPTRASYGVPEDRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRMEARKRGVRDEQV 633
            V CY+ + +D S+WRRKI GE EHF DVS + NGD A+LIHADGI IL+NLNGYTKGARNEIFAL+PAP+Q       VSY+GFCGTLGADY+QYMI D  +VPPE RR+++EK++ MPHSYFVNDHKQSAR VLD    P+RA YGVPED+FV CNFNQ+YK+DP+ F TWM+VLKRVP ++LWLLRFPP  EAN+R EAR +GV+D ++
Sbjct:  605 VFCYSTTPDDGSIWRRKIMGEVEHFKDVSMMNNGDAAKLIHADGIHILVNLNGYTKGARNEIFALKPAPIQ-------VSYMGFCGTLGADYVQYMIGDAVVVPPEHRRYFSEKIINMPHSYFVNDHKQSARDVLDVEKCPSRAHYGVPEDKFVFCNFNQVYKIDPATFRTWMNVLKRVPNSILWLLRFPPLAEANLRAEARAQGVKDNRL 808          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10215.262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZU9_9PHAE5.660e-12690.05Protein O-GlcNAc transferase n=2 Tax=Ectocarpus Ta... [more]
A0A2P4Y2W6_9STRA1.730e-10269.86UDP-N-acetylglucosamine-peptide N-acetylglucosamin... [more]
K3X4T5_GLOUD3.510e-10067.77Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2BCC6_9STRA1.250e-9766.51Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A3R7HUL3_9STRA3.910e-9770.81Protein O-GlcNAc transferase n=4 Tax=Phytophthora ... [more]
D0NXA5_PHYIT5.610e-9769.86Protein O-GlcNAc transferase n=2 Tax=Phytophthora ... [more]
A0A835ZDI7_9STRA7.400e-9769.30Protein O-GlcNAc transferase n=1 Tax=Tribonema min... [more]
M4BYK0_HYAAE1.320e-9670.33Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
A0A0W8DU52_PHYNI1.700e-9670.33Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
A0A8K1FGH6_PYTOL9.430e-9667.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10215contigL-elsbetiae_contig10215:1314..4449 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score397.1
Seed ortholog evalue5e-108
Seed eggNOG ortholog2880.D7FX68
KEGG rclassRC00005,RC00059
KEGG koko:K09667
KEGG ReactionR09304,R09676
KEGG Pathwayko00514,ko04931,map00514,map04931
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.protein N-acetylglucosaminyltransferase activity
EggNOG OGsCOG3914@1,KOG4626@2759
EC2.4.1.255
COG Functional cat.O
CAZyGT41
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko03036
Exons4
Model size633
Cds size633
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10215.262.1prot_L-elsbetiae_contig10215.262.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10215 1314..4449 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815252.4879563-CDS-L-elsbetiae_contig10215:1313..15591622815252.4879563-CDS-L-elsbetiae_contig10215:1313..1559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10215 1314..1559 -
1691682797.321085-CDS-L-elsbetiae_contig10215:1313..15591691682797.321085-CDS-L-elsbetiae_contig10215:1313..1559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10215 1314..1559 -
1622815252.5026686-CDS-L-elsbetiae_contig10215:2346..24991622815252.5026686-CDS-L-elsbetiae_contig10215:2346..2499Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10215 2347..2499 -
1691682797.3328135-CDS-L-elsbetiae_contig10215:2346..24991691682797.3328135-CDS-L-elsbetiae_contig10215:2346..2499Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10215 2347..2499 -
1622815252.5129035-CDS-L-elsbetiae_contig10215:2954..30921622815252.5129035-CDS-L-elsbetiae_contig10215:2954..3092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10215 2955..3092 -
1691682797.3500242-CDS-L-elsbetiae_contig10215:2954..30921691682797.3500242-CDS-L-elsbetiae_contig10215:2954..3092Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10215 2955..3092 -
1622815252.5229988-CDS-L-elsbetiae_contig10215:4353..44491622815252.5229988-CDS-L-elsbetiae_contig10215:4353..4449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10215 4354..4449 -
1691682797.3636549-CDS-L-elsbetiae_contig10215:4353..44491691682797.3636549-CDS-L-elsbetiae_contig10215:4353..4449Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10215 4354..4449 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10215.262.1

>prot_L-elsbetiae_contig10215.262.1 ID=prot_L-elsbetiae_contig10215.262.1|Name=mRNA_L-elsbetiae_contig10215.262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
VKCYALSANDDSVWRRKIEGESEHFCDVSSLQNGDVARLIHADGIDILIN
LNGYTKGARNEIFALQPAPVQARNTSLIVSYLGFCGTLGADYIQYMIADE
TLVPPESRRFYTEKLLYMPHSYFVNDHKQSARYVLDRTLLPTRASYGVPE
DRFVLCNFNQLYKMDPSIFSTWMSVLKRVPKAVLWLLRFPPAGEANIRME
ARKRGVRDEQV
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mRNA from alignment at L-elsbetiae_contig10215:1314..4449-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10215.262.1 ID=mRNA_L-elsbetiae_contig10215.262.1|Name=mRNA_L-elsbetiae_contig10215.262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3136bp|location=Sequence derived from alignment at L-elsbetiae_contig10215:1314..4449- (Laminarionema elsbetiae ELsaHSoW15)
GTGAAGTGCTACGCTCTCTCGGCGAACGACGACAGCGTGTGGAGACGCAA GATTGAGGGCGAGTCGGAGCACTTCTGCGACGTGTCTAGCCTGCAGGTGC GTGCCAGAGGGAGAGAGAGCGAAGGGTGGAACTAACTCTGCCCAGAGGGG GAGGTGATATCTTGTGTCGTCATAGATAAACGAATGCTTGCGTGCGCCAC GCAGCGAACTGAACGCACGCTACTGCTCTCTCTAAACACGAAGAGGTGAT ATATGTCGTGAAAAAAGCGTGGTCGCGCTAAATAGAGTGAAATCGCCGTG GAGTCGTTGCTTTTGATTGCGACCGCGAGCAGGGGTCAGGGGCGAGTTGA TTGATGTACGTACCGTAGGTGACACACACAAGATACCACCCCCCTCGGGC AGATTTCAAAGCTCGATTCCTCCGCAGCAAGAAAGTGCCAGTGCCGAAAG GGGAGTGGCGTTGGAAAGATCTAGTGGAGCGCTATCCGAAAACAGGTTTC TTGGTGCTGGTATGCACCTTCTTCGTTACGGAGTAGTGGAGCTCTAAAAG TCGGTCCAGGGGGTGTGGTATCTTGTGTCACCTATCCTACGGCACGGTGT TGTTCTCTCACAGCATGGGATGGTTGACAGCCAGAGATGGGGACGCATTT TCTCGTTGAATGCTGCTGTGTGTGCGTGTGTGTGCATGTGTGTGTGTGTG TATTTTCCCTCCCATTATTGGCTGATTCGTCGTCTGGTCCACTGGCCCCC TTCCTCCACTACGACTATTCAACCCCCCCTCTCGGCATATACAGGGGGGG GGGGGGGGGGGGGGTGGACCCCCTCCTGCGGTGCCTGCCTGTGATGTTTT TATCGCGAGCAGGGTTCAGCACTCCCCACCCTCGTCAACAATGATGTCGA AGCATTATTTGTGTGTGTGTGTGTGTGTGTGTGTTGAGGTTTTTGCCGAT ACGCTAGCGAGCACGTTTTCATCCCATCGCATCCTGTTCATGCTGTGGTT GGTGCCCGTTCTCTTTCCGCGCCCCTACCGAGACGGCGATGACTCCTCTA TTACGCGCACGGTGACCCACGCAGTCCTGGCACGATGGTGATTTGTGTTT TCGATAGAAATGCACCATTCATTTGACTATTTTTGAGTGTTTTTTACCCG TTCTTTTTTTATTTTGGGTGCATATGCCCTCACGTACATACATAAAGAAA CTATTCTGTATGGTATGTTTTTATTCTCTCTCTTATTTTTCGCCTGTCTG TTCCTACGGATACCCATATGTTTGTTTATTTTTTGGTGCGCAATTTTACC AGATCGATTTACGTATAGATTTTAACTGTTTTTGTGTGCTTCGGTCCGCT GTCTTAGAACGGGGACGTGGCGAGGCTCATCCACGCCGACGGGATCGACA TCCTCATCAACCTGAACGGCTACACCAAGGGGGCACGGAACGAGATCTTC GCCCTCCAGCCCGCCCCCGTACAGGCGAGAAACACCTCTTTAATTGTGTC ACTTTGCTCCGGCTGGAGAGTTTTTTATTTTGAGCATCTACTGTAAATGT CATTGGGACTTGGTGATTATTCTATAATCAAAGAGAGACGGGAAGAGACA GGGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAAAGTCGAGGAGAGAGAAAACTAGTGACCAAGCTGCGAA ATGTCGCGGGTCGTCTATAATAGCGCGGCCTTATTACAAATGGCAGTGGA CATTATTACTGCAGGATAGGGGCGCCGCTTTGCCCTCTCTCACTCAAGGC CCTCAACGAGTGAAGAAAAGCCTGTGAGCTTCGAGCGCCGCATATCGGGC TTGTTGTGATTGTGTTGTCAGCGAAGTTGTATGCATGTACTGTATGTATG TACAACGCGCCTCATCGATTCTGTCGACCATGCCCTGTCGGCGGGCGCAG GTGTCGTACCTGGGGTTCTGCGGTACTCTCGGCGCGGACTACATCCAGTA CATGATCGCCGACGAGACGCTCGTGCCGCCGGAGAGCCGGCGTTTCTACA CGGAGAAGCTGCTGTACATGCCGCACTCGTACTTCGTCAACGACCACAAG CAGGTGGGAGAGATAATAGAGGTAATAGGGAGAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAACATGGAGTTAATCTCTTTTTTTTCACATTTTTTC AGCGCTCGATATTGGGCTGCTTGCCACGAGGGCATCTTGCCAGAGTACTG AACCGTGGTCACACGGAAGGGTTCCTCACTCCGAGGCCTCCGCTTCCCAC CTTCTGCGGTGCTTGCCTAAGGTTTTGTCGCGAGCAGGGTTTAGTCGTCC GTTTCCCTCGTCAACGGTGAGGTCTAAGTTGGTGTACTCACGCTACGTAA CTACAGTACACGCCCTTTTATATCGTCAGGAGCCGCCCTCCCATGATTAT TAATATTGGGTGCCTTTTTGCCTGTTCCGGAGCCCGGAATACCGAACAGG ACGCGCGCGATCAGTCTGTAGCCCTCCAGATAAACGCACGGCGTTCTTCT ACAGCAGTACTACGAGACTAGATCGAGTCCTGAGTTATTACCCGGCTACA TACCGACATCTCACACACCTTCCTTCCTTTTCTCTCCTCCCTCCCCCCCC ACCCCCCCCACCCCTCCTCACCGGACGTATTTACTTCCGGCGGCTCTGCG ATGGCTCAACCTGCCATCACCACGGGCGTCGATATCGCCATCGACGACGA CGACGACAACAACAACAACACCAACACCGGCACGACGAAACACCAACACG AACATGCCCAAAATAACGGAAACGCAACACACACACGGAACCCCCCCACC ACCACCACCACACACGGAACACGCGGAACACACACCGCAGTCCGCTCGGT ACGTCCTGGACCGCACGCTCCTGCCTACCCGCGCGTCGTACGGCGTACCG GAGGACCGTTTCGTGCTGTGCAACTTCAACCAGCTCTACAAGATGGACCC GAGCATATTCTCCACGTGGATGTCGGTGCTCAAGCGGGTGCCCAAGGCGG TGCTGTGGCTCCTGAGGTTTCCCCCCGCGGGCGAGGCGAACATCAGGATG GAGGCCCGGAAGAGAGGCGTCCGGGACGAGCAGGTC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10215:1314..4449-

>mRNA_L-elsbetiae_contig10215.262.1 ID=mRNA_L-elsbetiae_contig10215.262.1|Name=mRNA_L-elsbetiae_contig10215.262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig10215:1314..4449- (Laminarionema elsbetiae ELsaHSoW15)
GTGAAGTGCTACGCTCTCTCGGCGAACGACGACAGCGTGTGGAGACGCAA
GATTGAGGGCGAGTCGGAGCACTTCTGCGACGTGTCTAGCCTGCAGGTGA
AGTGCTACGCTCTCTCGGCGAACGACGACAGCGTGTGGAGACGCAAGATT
GAGGGCGAGTCGGAGCACTTCTGCGACGTGTCTAGCCTGCAGAACGGGGA
CGTGGCGAGGCTCATCCACGCCGACGGGATCGACATCCTCATCAACCTGA
ACGGCTACACCAAGGGGGCACGGAACGAGATCTTCGCCCTCCAGCCCGCC
CCCGTACAGGCGAGAAACACCTCTTTAATTAACGGGGACGTGGCGAGGCT
CATCCACGCCGACGGGATCGACATCCTCATCAACCTGAACGGCTACACCA
AGGGGGCACGGAACGAGATCTTCGCCCTCCAGCCCGCCCCCGTACAGGCG
AGAAACACCTCTTTAATTGTGTCGTACCTGGGGTTCTGCGGTACTCTCGG
CGCGGACTACATCCAGTACATGATCGCCGACGAGACGCTCGTGCCGCCGG
AGAGCCGGCGTTTCTACACGGAGAAGCTGCTGTACATGCCGCACTCGTAC
TTCGTCAACGACCACAAGCAGGTGTCGTACCTGGGGTTCTGCGGTACTCT
CGGCGCGGACTACATCCAGTACATGATCGCCGACGAGACGCTCGTGCCGC
CGGAGAGCCGGCGTTTCTACACGGAGAAGCTGCTGTACATGCCGCACTCG
TACTTCGTCAACGACCACAAGCAGTCCGCTCGGTACGTCCTGGACCGCAC
GCTCCTGCCTACCCGCGCGTCGTACGGCGTACCGGAGGACCGTTTCGTGC
TGTGCAACTTCAACCAGCTCTACAAGATGGACCCGAGCATATTCTCCACG
TGGATGTCGGTGCTCAAGCGGGTGCCCAAGGCGGTGCTGTGGCTCCTGAG
GTTTCCCCCCGCGGGCGAGGCGAACATCAGGATGGAGGCCCGGAAGAGAG
GCGTCCGGGACGAGCAGGTCTCCGCTCGGTACGTCCTGGACCGCACGCTC
CTGCCTACCCGCGCGTCGTACGGCGTACCGGAGGACCGTTTCGTGCTGTG
CAACTTCAACCAGCTCTACAAGATGGACCCGAGCATATTCTCCACGTGGA
TGTCGGTGCTCAAGCGGGTGCCCAAGGCGGTGCTGTGGCTCCTGAGGTTT
CCCCCCGCGGGCGAGGCGAACATCAGGATGGAGGCCCGGAAGAGAGGCGT
CCGGGACGAGCAGGTC
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