mRNA_L-elsbetiae_contig10196.243.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10196.243.1
Unique NamemRNA_L-elsbetiae_contig10196.243.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: D8LTJ2_ECTSI (Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTJ2_ECTSI)

HSP 1 Score: 397 bits (1020), Expect = 4.920e-135
Identity = 192/202 (95.05%), Postives = 197/202 (97.52%), Query Frame = 1 
Query:    1 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALDQKHKRERDLALNPSYGGGTTLDIADQRARQQRTGGCCW 606
            VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLA  +AMDG+ GVDKTRV+KWCEMQGMGHIETSAKDGTGVEVAMQAVAVLAL+QK KRERDLALNPS GGGTTLD+ADQRARQQRTGGCCW
Sbjct:  164 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLATGLAMDGIHGVDKTRVMKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALEQKRKRERDLALNPSLGGGTTLDLADQRARQQRTGGCCW 365
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: A0A7S2RVV0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVV0_9STRA)

HSP 1 Score: 213 bits (541), Expect = 7.300e-64
Identity = 104/201 (51.74%), Postives = 139/201 (69.15%), Query Frame = 1 
Query:    1 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALDQKHKRERDLA-LNPSYGGGTTLDIADQRARQQRTGGC 600
            VGKTSLM+R+    F++ RR T GADF +K +    Q ++LQIWDTAGQERFH G+LG  F+RGA+AALLVYD   A SF+QV  WR E+L R+DV P DFP+VV+GNKVD+     MDG+ GVDK  V +WC   G GHIETSAKDGTGV+VAM+A+  LAL ++    + +A +N   G   +++++    + + + GC
Sbjct:   17 VGKTSLMRRFCKNSFSEARRATTGADFSSKRMSFAGQEVMLQIWDTAGQERFHHGTLGGAFYRGADAALLVYDATSASSFKQVENWRSEVLSRIDVAPGDFPLVVVGNKVDMEGNTPMDGIHGVDKAAVTEWCRAHGTGHIETSAKDGTGVQVAMEAIGTLALARRKAGVQRIARMNSLTGAKDSVNLSTSFRKGETSSGC 217
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: F0Y7J9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7J9_AURAN)

HSP 1 Score: 180 bits (457), Expect = 4.200e-52
Identity = 99/202 (49.01%), Postives = 131/202 (64.85%), Query Frame = 1 
Query:    1 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALDQKHKRERDLALNPSYGGGTTLDIADQRARQ-QRTGGCC 603
            VGKTSL+ ++  G FT  RR T GADF +K +  GD+ + L IWDTAGQERFH G+LG  F+RGA+AALLVYD     +FEQ+ MWR ELL R+D  P +FP+VV+GNKVD+ +       +  ++  V++WC   G+G   TSAKDGTGV VAM+AVA+LAL+ K +R+   A  P     T + + +  AR   R   CC
Sbjct:   21 VGKTSLLMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAGQERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRELLQRIDGPPEEFPVVVVGNKVDVPNK-----TREHEQAAVVRWCRDLGIGLCLTSAKDGTGVAVAMEAVAMLALENKRRRQ---AAEPEQKRQTVV-LDELHARPVARDASCC 213
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: A0A482SWX8_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWX8_9ARCH)

HSP 1 Score: 172 bits (437), Expect = 2.780e-49
Identity = 93/177 (52.54%), Postives = 120/177 (67.80%), Query Frame = 1 
Query:   13 SLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALDQKHKRERDLALNPSYGG 543
            S   R+A G F+  RRPT+G+DF TK++V  D  + LQIWDTAGQERF+ GS+GS FFRGA+ ALLVYDV    S EQ+A WREE L R   D + FP+VVIGNK+D+ + + ++  + VD + V+ WC     GHIETSAKDG GVE AM A+  LAL+    R+R   +N + GG
Sbjct:    9 SSFDRFATGRFSGLRRPTVGSDFQTKKMVVHDVEVTLQIWDTAGQERFNQGSIGSAFFRGAHGALLVYDVNDEKSIEQIAQWREECLSRQLEDEY-FPMVVIGNKIDVREKIPVE--RRVDVSGVLTWCREHSYGHIETSAKDGHGVEAAMLAITGLALENMRNRQRR-NVNAAMGG 181
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: A0A8J2S8J0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8J0_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.730e-46
Identity = 93/202 (46.04%), Postives = 123/202 (60.89%), Query Frame = 1 
Query:    1 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALDQKHKRERDLALNPSYGGGTTLDIADQRARQQR-TGGCC 603
            VGK+SL++RY    F   RR T+GADF +K +  G++ + L IWDTAGQERFH G++G  F+RGA+ ALLVYD     +F QV +WR ELL R+D  P  FPIV +GNK+DL      D     D+     WC   G+G +  SA DGTGV VAM+AVA LAL+ K +R+      P      +L + D  AR++R +  CC
Sbjct:   70 VGKSSLLERYTKNSFRPERRVTLGADFASKVIEVGEERVRLVIWDTAGQERFHHGTIGGAFYRGADGALLVYDTTDFATFAQVELWRRELLQRVD-GPEAFPIVCVGNKMDLPCPTRSD-----DEKAAEAWCAAHGVGLLFASACDGTGVAVAMEAVAALALENKKRRQALGVTKPP-----SLSLDDLHAREKRGSSNCC 260
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: A0A7S3K3U1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U1_9STRA)

HSP 1 Score: 157 bits (398), Expect = 3.310e-43
Identity = 87/171 (50.88%), Postives = 112/171 (65.50%), Query Frame = 1 
Query:    1 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQ--PMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQGMGHIETSAKDGTGVEVAMQAVAVLALDQKHKR 507
            VGKTSL+ ++  G F   RR T GADF ++ V+E DQ   + L IWDTAGQERFH G+LG+ F+RGA+ ALLVYD     SFEQ+ MWR ELL R+   P +FP+VV+GNK+D+         +  +   V KWC   G+G   TSAKDGTGV  AM+A+A LA + K +R
Sbjct:   22 VGKTSLLTQFIHGRFDSTRRATTGADFASR-VLEIDQGRKIRLVIWDTAGQERFHHGTLGNAFYRGADGALLVYDTTDIRSFEQIEMWRGELLQRVQGPPDEFPVVVVGNKIDIPSE-----TRDSEFAAVQKWCRDLGIGICLTSAKDGTGVLAAMEAIAHLAYEAKQRR 186
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: A0A7S3H9L0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9L0_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.250e-42
Identity = 93/205 (45.37%), Postives = 126/205 (61.46%), Query Frame = 1 
Query:    1 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQG---MGHIETSAKDGTGVEVAMQAVAVLALDQKHKRERDLALNPSYGGGTTLDIADQRARQQRTGGCC 603
            VGKTSLM +Y    F+   + TIGADF+TKEV+  D+ + LQIWDTAGQERF   SLG  F+RGA+A +LV+D+    SFEQ+  WREE L + +  DP +F  VVIGNKVD       +  + V K++V +WC+ QG   + + ETSAKD T VEVA    A  AL Q    + D+ +        T++++ Q A  + +GGCC
Sbjct:   19 VGKTSLMNQYVNQRFSSQYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQ--SLGVAFYRGADACILVHDITAEKSFEQLNSWREEFLAQANPRDPDNFSFVVIGNKVD------KESERRVPKSKVTQWCKSQGPKPIPYFETSAKDATKVEVAFLEAAQAALHQD-SADSDVFIPD------TINLSKQTAPAKSSGGCC 208
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: A0A0C2XM57_AMAMK (Uncharacterized protein n=4 Tax=Agaricales TaxID=5338 RepID=A0A0C2XM57_AMAMK)

HSP 1 Score: 150 bits (379), Expect = 1.380e-40
Identity = 80/172 (46.51%), Postives = 113/172 (65.70%), Query Frame = 1 
Query:    1 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQG-MGHIETSAKDGTGVEVAMQAVAVLALDQKHKRE 510
            VGKTSLM +Y    F++  + TIGADF+TKEV+  D+P+ +Q+WDTAGQERF   SLG  F+RGA+  +LVYDV  + SFE +  WR+E L++    DP +FP VV+GNK+D+ +       + V + R + WC+ +G + + ETSAKD   VE A Q VA  AL Q+ + +
Sbjct:   16 VGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRPVTMQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGNKIDVEE-----NKRQVTQKRAMTWCQSKGNIPYFETSAKDAINVEQAFQTVAKNALQQEAEEQ 180
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: A0A0D6EQY3_SPOSA (SPOSA6832_04189-mRNA-1:cds (Fragment) n=4 Tax=Sporidiobolaceae TaxID=1799696 RepID=A0A0D6EQY3_SPOSA)

HSP 1 Score: 149 bits (376), Expect = 4.090e-40
Identity = 80/173 (46.24%), Postives = 114/173 (65.90%), Query Frame = 1 
Query:    1 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQG-MGHIETSAKDGTGVEVAMQAVAVLALDQKHKRER 513
            VGKTSLM +Y    F++  + TIGADF+TKEV+  D+ + +Q+WDTAGQERF   SLG  F+RGA+  +LVYDV  + SFE +  WR+E L++    DP +FP VV+GNK+D+ D+  M     V + R + WC+ +G + + ETSAK+ T VE A QA    AL Q+ + ++
Sbjct:   19 VGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTAGQERFQ--SLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPRDPENFPFVVLGNKIDVEDSKRM-----VSQKRAMTWCQSKGNIPYFETSAKEATNVEQAFQAACRNALQQEAEADQ 184
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BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Match: D2VAL1_NAEGR (Rab family small GTPase n=2 Tax=Naegleria TaxID=5761 RepID=D2VAL1_NAEGR)

HSP 1 Score: 149 bits (375), Expect = 5.280e-40
Identity = 87/203 (42.86%), Postives = 122/203 (60.10%), Query Frame = 1 
Query:    1 VGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDV-DPHDFPIVVIGNKVDLADAMAMDGVQGVDKTRVIKWCEMQG-MGHIETSAKDGTGVEVAMQAVAVLALDQKHKRERDLALNPSYGGGTTLDIADQRARQQRTGGCC 603
            VGKTSLM +Y    F++  + TIGADF+TKEV+  D+ + +QIWDTAGQERF   SLG  F+RGA++ +LV+D   A +FE +  WR+E L++    DP +FP VVI NK+DL   +       V + R + WC+ +G + + E SAK+GT VE A Q +A  AL     +E D    P  GG +  +  D+   Q +  GCC
Sbjct:   19 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQ--SLGVAFYRGADSCVLVFDATVAKTFENINSWRDEFLIQAGPPDPDNFPFVVIANKIDLDQRI-------VPQKRALAWCKAKGNIPYFECSAKEGTNVEQAFQTIARNALG----KEED---TPYTGGQSITEFPDEP--QPKKSGCC 203
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10196.243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTJ2_ECTSI4.920e-13595.05Rab7L, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2RVV0_9STRA7.300e-6451.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0Y7J9_AURAN4.200e-5249.01Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482SWX8_9ARCH2.780e-4952.54GTP-binding protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A8J2S8J0_9STRA2.730e-4646.04Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3K3U1_9STRA3.310e-4350.88Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3H9L0_9STRA1.250e-4245.37Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A0C2XM57_AMAMK1.380e-4046.51Uncharacterized protein n=4 Tax=Agaricales TaxID=5... [more]
A0A0D6EQY3_SPOSA4.090e-4046.24SPOSA6832_04189-mRNA-1:cds (Fragment) n=4 Tax=Spor... [more]
D2VAL1_NAEGR5.280e-4042.86Rab family small GTPase n=2 Tax=Naegleria TaxID=57... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10196contigL-elsbetiae_contig10196:773..5085 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.3
Seed ortholog evalue8.3e-105
Seed eggNOG ortholog2880.D8LTJ2
KEGG koko:K07897
KEGG Pathwayko04137,ko04138,ko04140,ko04144,ko04145,ko05132,ko05146,ko05152,map04137,map04138,map04140,map04144,map04145,map05132,map05146,map05152
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0394@1,KOG0394@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Ec32 ortholog descriptionRab7L, RAB family GTPase
Ec32 orthologEc-02_005820.1
Exons5
Model size1008
Cds size591
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815249.989137-UTR-L-elsbetiae_contig10196:772..11711622815249.989137-UTR-L-elsbetiae_contig10196:772..1171Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10196 773..1171 -
1691682795.6650069-UTR-L-elsbetiae_contig10196:772..11711691682795.6650069-UTR-L-elsbetiae_contig10196:772..1171Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10196 773..1171 -
1622815250.066457-UTR-L-elsbetiae_contig10196:5067..50851622815250.066457-UTR-L-elsbetiae_contig10196:5067..5085Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10196 5068..5085 -
1691682795.724513-UTR-L-elsbetiae_contig10196:5067..50851691682795.724513-UTR-L-elsbetiae_contig10196:5067..5085Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10196 5068..5085 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815250.0048575-CDS-L-elsbetiae_contig10196:1171..13721622815250.0048575-CDS-L-elsbetiae_contig10196:1171..1372Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 1172..1372 -
1691682795.67633-CDS-L-elsbetiae_contig10196:1171..13721691682795.67633-CDS-L-elsbetiae_contig10196:1171..1372Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 1172..1372 -
1622815250.0168843-CDS-L-elsbetiae_contig10196:1909..19901622815250.0168843-CDS-L-elsbetiae_contig10196:1909..1990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 1910..1990 -
1691682795.6844897-CDS-L-elsbetiae_contig10196:1909..19901691682795.6844897-CDS-L-elsbetiae_contig10196:1909..1990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 1910..1990 -
1622815250.0318995-CDS-L-elsbetiae_contig10196:2335..24161622815250.0318995-CDS-L-elsbetiae_contig10196:2335..2416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 2336..2416 -
1691682795.6922367-CDS-L-elsbetiae_contig10196:2335..24161691682795.6922367-CDS-L-elsbetiae_contig10196:2335..2416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 2336..2416 -
1622815250.0450966-CDS-L-elsbetiae_contig10196:4461..45811622815250.0450966-CDS-L-elsbetiae_contig10196:4461..4581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 4462..4581 -
1691682795.701968-CDS-L-elsbetiae_contig10196:4461..45811691682795.701968-CDS-L-elsbetiae_contig10196:4461..4581Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 4462..4581 -
1622815250.0549314-CDS-L-elsbetiae_contig10196:4959..50671622815250.0549314-CDS-L-elsbetiae_contig10196:4959..5067Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 4960..5067 -
1691682795.7144341-CDS-L-elsbetiae_contig10196:4959..50671691682795.7144341-CDS-L-elsbetiae_contig10196:4959..5067Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10196 4960..5067 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10196.243.1prot_L-elsbetiae_contig10196.243.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10196 1172..5067 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10196.243.1

>prot_L-elsbetiae_contig10196.243.1 ID=prot_L-elsbetiae_contig10196.243.1|Name=mRNA_L-elsbetiae_contig10196.243.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp
MKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIWDTAGQERFHGGS
LGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHDFPIVVI
GNKVDLADAMAMDGVQGVDKTRVIKWCEMQGMGHIETSAKDGTGVEVAMQ
AVAVLALDQKHKRERDLALNPSYGGGTTLDIADQRARQQRTGGCCW*
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mRNA from alignment at L-elsbetiae_contig10196:773..5085-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10196.243.1 ID=mRNA_L-elsbetiae_contig10196.243.1|Name=mRNA_L-elsbetiae_contig10196.243.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4313bp|location=Sequence derived from alignment at L-elsbetiae_contig10196:773..5085- (Laminarionema elsbetiae ELsaHSoW15)
GTTGGGAAGACGAGCCTAATGAAGAGATACGCCGCCGGTGACTTCACGGA
CTACCGACGGCCGACCATTGGGGCGGATTTCATGACCAAGGAGGTCGTGG
AGGGGGACCAGCCGATGCTTCTGCAGGTATTTCAAGGGGCTGGCCGTCGT
CGAGGCTAATGTTGCAAGCACGTAGGGGGGGGGGGGTCATCGGTGTTGAT
CGGGCCCCCTGGCTGGATGAGGCGAGAGCCCCGTGATTCAAGAGCCTTTC
TTCACTTGGCTTGCGACAGAGGGCCGCCACCTCGAACAGCTCCCTCGTGT
CCTGTTCTCCACCCGACGAGACCAGATTCGCTCCCTCCTTAAGGGCGACG
GGCTGGTTCCAGCCCGTGCCCCGCCACAACGCCCCGCCGGTGGGCGTCGT
TTTCCGTATAAATGTATATCCGGCTGATTTACCCAAGTACATGACCTGTT
CTTACGTTGTGTTCGTCGTTTGCCCTCTTTTTTTGCCCTTGCACGCCGAC
ACAGATATGGGACACCGCAGGGCAGGAGCGGTTCCACGGGGGCTCATTGG
GGTCGGGGTTCTTCCGAGGGGCCAACGCCGCCCTGTTGGTGTACGACGTT
GCCTGCGCGGTGTCGTTCGAGCAGGTATGTATGTATGCATGCATGCATGT
ACCCTATACGTGTGACACGGCCGTGACGTCATGCCCGCAAGACAGCCAAA
CATGAGCCTTCGTGCGGGCGGGAGGGAGGGACGTCGCGAGAGCGCGAGAG
CCCCCCTCTCTACTAGTACACCGTACGAATGCGTACATCTGCGTAGAAGT
CGGCTCCTACGGGGGTGAGATGACTTTTCGCGGCCCGAGATATCGGGCCG
CGAAAATCCTCGATTTTGGGAAAGCCCCCCCCTCTCTACGACAGCAGCCT
TCGCAAGTTTTTACAGTAAGAAATCATATGGGATAAGTTATGGAAATGGC
TAATGGGGGGTCGGTTTGGGGTTAGGGGTAGGGTTAGGGTTACGGAACCC
CTGTCTATTATTTCCTATATATGTATATAGACAGGAGTTCTTCACGAAGA
CGGCCCCTCTACGAAAACCCAATTTTCGGAAAGCCCCCCCTCTCTACGAG
TACACCCACCGTAAGGCCAATTGTTATGGGAGCAGATTTGGAATCCAGGA
TTCCCATTCGCTGGGGGCACGCAGATGAAGTGAGAATCGCTCTTTTTTGC
TCAGGGCTCGCCTCCCAGACATCCGTTTGCAGCCTAACCAACAGGAATGT
GTGCTCCAATGGCGTTACTGCGTCTCGGAGCCAACTTTGGGGAGCAACGG
TGAGGTGCTGGCCTCACACGCTTTGAAACCAAAGGATTCCAAATTGGAAT
CGCGGAGTTTTCCCTGTTGGGAAAATCGCCCGGATTCCAACGCGAAATTC
CAGTTTGGAATTCTTGGGTTTCAAAGCGTGTGAGGCCAGCACCTCACCGT
TGCTCCCCAAACTTAGCTCTGAGACAGTCACACCATTGGAGCACACATCC
CTGTTGGTTGGGCTGCAAACGGATGTCTGGGAGGCGAGCCCTGAGCAAAA
AAGAGCAATCCTCAGCCAAAACAATTTCGTCTGCGTGCCCCCAGTGGATT
GGAATCCTGGATTCCAATCTGCTCCCATAACATTTGGCCTAAGGATGCGA
AAATAGGTTCGCACGGGGGTGCGATAACTTTCCGCGGTGCGGCCCGACAT
CTCAGCACCTTGGCCGGGGCCGCGAAAACCCGATCTTCGGAAAGGCCTCG
TCGGGATCTTTCCGGTAACACCCTCTCAGACGTTGGCACCCTCCCTCCCT
CCCCATTTGCCAAGATATCGCGCCGCGAAAAACTATCGAAACTCCTGTGC
GAGAGCCTTCGCGCCCTTACGGTACATTAGGCATAATAGAGGCGGGGGCA
CGGCCTCTATGCCCCCATATTTTCCACTTTTTTTTTTTTTAATGTGAAGA
TAACAACAACCCACGAACGGATTCGATCTGGGTTTCTCGCGGTCGGTGCG
GTCGGTACTTTCTCGCGGTCGGTGCGGTCGGTACACTTTCTCGCGGTCGG
TGCAGTCGGTACTTTCTCGCGGTCGGTGCGGTCGGTACACTTTCTCGCGG
TCGGTGCGGTCGGTACTTTCTCGCGGTCGGTGCTTTAGCGGATTATGGAA
GCCCTCGGGCGTCCCCGCGCGCGTAACCGCAGTTAATAGTAGACCCACGC
ACGCGTTGGGGCTGGGTGGATGGGTCGCGTTAGCTTCCTGGAGACGCAGC
AGAGATGCATACCTAGGACGGTCGAAGCCCGCAGGAGGTAGATAAAATGT
TTGTGCCTGCGCTGCACTGCACTGCACTGCACTGCACTGCACTGCACTGC
ACTGCACTGCGCTGCTGCACTGCACCAGTTGCGCGAGGCAAGCTGCTCAG
CTGCAACGCTGGCCCATGGCGGGCTCGTGCCGCCATGTCCCCTTTTCGGA
GAGTGGCCAGGGGTGTGTGCGTCGAGTGAGAACATCCGAATACCGCTTCA
GGGACAATTTTCCTAAAGATGAATAAATATTTATATTCCCTCCCAATTAA
TCTCCTTCCCCGTCTGGAACACGCGTGCTTCACACATATGCACCCTCTTG
GGGTTCTGTCTTTTCTTTTTTTGTTTTTTGGTGGGTTTTCGTCTCACCGC
TGTTTTGCGGCACGTCAAGGTGGCCATGTGGCGAGAAGAACTGCTGGTCC
GCCTGGACGTCGACCCGCACGACTTCCCCATCGTTGTCATCGGGAACAAG
GTGCGAGGCCAGGTCCGGCTACTGCCGGCTTCTACCGGTACTGCTGCAGT
GCTGCTTTACGCCGACGAAATGCTGTGCACTCGCACCTTGATTTCAATTA
ATGTCTCAAATGTCAGCAGTCTACGTCCAGTCTGTGAAAAAGTCGTGCCA
GAGGGACTGTCGCGAGATCCACGACTCTTGTCTGTTATTTTCGGCTGGGT
AAACGGGTAAAGTTCCATAGTTGGTCTCTTGTGCCGTGGTGCTAAATAGA
CCCTCGCTGTGGAGTTGTGGTTTTTAATGCGAAGACAAACAACACACCTT
GCCACACTGTCGTGTCTCTTCGTGGCCGTGATTTGCCTACCAAAGGTCGA
TTTGGCGGATGCCATGGCGATGGATGGAGTGCAGGGAGTGGACAAGACCC
GAGTCATAAAGTGGTGCGAGATGCAGGTATGTGCCTGCAAACACACATAC
ATACCGCATCTTGTCCTTGGCCATGTCGTCAATCAATGGGTTGAAATGAA
CCCCCTCCTCGTCGCCGTTTGTTCCGGTTCCTGCCCGCGAGTCGCGCGTG
TTTGGTGTATTTATTGCTTTTGGTATAGGTACGTCCGCGTAGGGGGCTCC
GCTGAACCGCTGCAGGCAAGCCGCAGAAGCAGTTATTTCTCCCCGCACGG
CGGAAATATTAGTTTTTGTGTTTCCGCCGCCAAGACAGCTGTCTTGGGCG
GCGGTGCGTGTCGTGCTACTCTGTACATGTATTTTCATACGTCCCAGCGC
AGTTTTTGTGTGCGGTGTTACCGTACCGCCTACCGCATCCCCCCTTCTTG
CGGACGGTGCGCTTCGTGTCGTGCTACTCTGTACATGTACTTCCATACGT
CCCAGCGCCGTCTTTGTGTGCGGCGTCACGCCCGCCTACCCCGCCCCCCC
CCGCCCGCCCCTATTAACTCTTTTGATCGCTGCTGCTGTACATGGGGTGT
CTCTTTGCCTCAGGGCATGGGCCACATCGAGACTAGCGCCAAGGATGGGA
CTGGCGTGGAGGTAGCCATGCAGGCGGTGGCGGTGCTGGCCTTGGACCAG
AAGCACAAGCGGGAGCGAGACTTGGCGCTGAACCCTTCCTACGGGGGCGG
GACGACGCTCGACATCGCCGACCAGCGCGCGCGGCAGCAGAGAACTGGCG
GGTGTTGCTGGTGAAACCCGCGCCGCGTTGCGCCGAACCGGACCGAACCG
AACCGGGGAAGGGCGGAGGGGGAAGATGTGAGGCTTGGTCTTTTCTCGTG
TGAGAAGGGAAAGGGTGATGCGTAAGGTCACTCTGTAGGGTCCGGTCTGC
CCCGGGAGCTGCAGGTCGGTTTTCCGGGGAGGGTGGGGGCTAGAGGAGGA
GAGCTGCGCTGGTCGTAGACCGCTTGCTCCCCTTGTGTGTGTAGTACATA
TAAGGTGGACGCAAAGGTGTTCGAGCGTCACGGTGGTGACGTGTACGGTA
AGGGACATGCTTTGTATGGAGTGGTTTTTGTCTTGCTCTGCTTGCACTCG
CGGTGTGAATAAATTACTTATACGGTGTCTAGGTATAAAATGTTTTATGA
TTTTTTCGTCGCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10196:773..5085-

>mRNA_L-elsbetiae_contig10196.243.1 ID=mRNA_L-elsbetiae_contig10196.243.1|Name=mRNA_L-elsbetiae_contig10196.243.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1182bp|location=Sequence derived from alignment at L-elsbetiae_contig10196:773..5085- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGAGATACGCCGCCGGTGACTTCACGGACTACCGACGGCCGACCAT
TGGGGCGGATTTCATGACCAAGGAGGTCGTGGAGGGGGACCAGCCGATGC
TTCTGCAGATGAAGAGATACGCCGCCGGTGACTTCACGGACTACCGACGG
CCGACCATTGGGGCGGATTTCATGACCAAGGAGGTCGTGGAGGGGGACCA
GCCGATGCTTCTGCAGATATGGGACACCGCAGGGCAGGAGCGGTTCCACG
GGGGCTCATTGGGGTCGGGGTTCTTCCGAGGGGCCAACGCCGCCCTGTTG
GTGTACGACGTTGCCTGCGCGGTGTCGTTCGAGCAGATATGGGACACCGC
AGGGCAGGAGCGGTTCCACGGGGGCTCATTGGGGTCGGGGTTCTTCCGAG
GGGCCAACGCCGCCCTGTTGGTGTACGACGTTGCCTGCGCGGTGTCGTTC
GAGCAGGTGGCCATGTGGCGAGAAGAACTGCTGGTCCGCCTGGACGTCGA
CCCGCACGACTTCCCCATCGTTGTCATCGGGAACAAGGTGGCCATGTGGC
GAGAAGAACTGCTGGTCCGCCTGGACGTCGACCCGCACGACTTCCCCATC
GTTGTCATCGGGAACAAGGTCGATTTGGCGGATGCCATGGCGATGGATGG
AGTGCAGGGAGTGGACAAGACCCGAGTCATAAAGTGGTGCGAGATGCAGG
TCGATTTGGCGGATGCCATGGCGATGGATGGAGTGCAGGGAGTGGACAAG
ACCCGAGTCATAAAGTGGTGCGAGATGCAGGGCATGGGCCACATCGAGAC
TAGCGCCAAGGATGGGACTGGCGTGGAGGTAGCCATGCAGGCGGTGGCGG
TGCTGGCCTTGGACCAGAAGCACAAGCGGGAGCGAGACTTGGCGCTGAAC
CCTTCCTACGGGGGCGGGACGACGCTCGACATCGCCGACCAGCGCGCGCG
GCAGCAGAGAACTGGCGGGTGTTGCTGGTGAGGCATGGGCCACATCGAGA
CTAGCGCCAAGGATGGGACTGGCGTGGAGGTAGCCATGCAGGCGGTGGCG
GTGCTGGCCTTGGACCAGAAGCACAAGCGGGAGCGAGACTTGGCGCTGAA
CCCTTCCTACGGGGGCGGGACGACGCTCGACATCGCCGACCAGCGCGCGC
GGCAGCAGAGAACTGGCGGGTGTTGCTGGTGA
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