mRNA_L-elsbetiae_contig10011.59.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10011.59.1
Unique NamemRNA_L-elsbetiae_contig10011.59.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.990e-70
Identity = 108/133 (81.20%), Postives = 121/133 (90.98%), Query Frame = 1
Query:   16 SQIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAVNGKR 414
            ++IECF DNPGILMYGNMCVVYTTGIWLLLAS+ ELPVSTTHSTIGGIVGMAMTYRGADCVVW+EE + FP++ GI+ IVASWV+SPVLS  IAVALFLFMRTFVLRSP+S +R+I VFPFLV ATIAVNG +
Sbjct:    3 AKIECFTDNPGILMYGNMCVVYTTGIWLLLASYFELPVSTTHSTIGGIVGMAMTYRGADCVVWYEEADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHQRAIVVFPFLVTATIAVNGNK 135          
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 2.050e-67
Identity = 104/130 (80.00%), Postives = 117/130 (90.00%), Query Frame = 1
Query:   16 SQIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAVN 405
            + IECFEDNPGILMYGNMCVVYTTGIWLLLASF ELPVSTTHST+GGIVGMAMTYRGADCVVW+EE + FP++ G++ IVASW +SP+ S  IAVALFLFMRTFVLRSP++ KR+I VFPFLV ATIAVN
Sbjct:   87 ADIECFEDNPGILMYGNMCVVYTTGIWLLLASFFELPVSTTHSTVGGIVGMAMTYRGADCVVWYEEADLFPYLKGVSAIVASWALSPLFSAVIAVALFLFMRTFVLRSPDAHKRAINVFPFLVTATIAVN 216          
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 8.260e-67
Identity = 105/130 (80.77%), Postives = 116/130 (89.23%), Query Frame = 1
Query:   16 SQIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAVN 405
            +  ECFEDNPGILMYGNMCVVYTTG WLLLASF ELPVSTTHSTIGGIVGMA+TYRG DCVVW+E+ + FP++ GI+ IVASWV+SPVLS  IAVALFLFMRTFVLRSP+S KR+I VFPFLV ATIAVN
Sbjct:   88 ADTECFEDNPGILMYGNMCVVYTTGFWLLLASFFELPVSTTHSTIGGIVGMAITYRGPDCVVWYEKADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHKRAIVVFPFLVTATIAVN 217          
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 9.320e-61
Identity = 95/129 (73.64%), Postives = 110/129 (85.27%), Query Frame = 1
Query:   19 QIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAVN 405
            Q+ CF DNPGILMYGNMCVVYT+G WLLLASF ELPVSTTH+T+GGIVGMAMTYRGADCVVW+EE E FP++ G++ IVASW +SPVLS  IAVAL+ FMRTFVLR+  S K++I +FP LV  TIAVN
Sbjct:   96 QVGCFVDNPGILMYGNMCVVYTSGFWLLLASFFELPVSTTHATVGGIVGMAMTYRGADCVVWYEEAEFFPYLKGVSAIVASWALSPVLSAVIAVALYFFMRTFVLRADQSQKKAINIFPCLVTVTIAVN 224          
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: D8LJQ4_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ4_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.450e-56
Identity = 81/136 (59.56%), Postives = 108/136 (79.41%), Query Frame = 1
Query:    4 SLFFSQIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAVNGK 411
            +L   ++ECF DNPG+LMYG MCVVYTTG+WLLLAS+L LPVSTTH+TIG ++GM + Y GA CVVWF+E+++FP+V G+A I  SWV+SP+ SG +++ +FL +R FVLRSPN+  RS  VFP LV+  I V+G+
Sbjct:   23 TLLKPKVECFLDNPGVLMYGMMCVVYTTGMWLLLASYLALPVSTTHATIGAMIGMTVVYGGAGCVVWFQESDSFPYVKGVAAIAVSWVLSPIFSGIVSLLVFLTVRAFVLRSPNAFGRSFWVFPILVMVAITVDGE 158          
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 5.650e-56
Identity = 89/129 (68.99%), Postives = 102/129 (79.07%), Query Frame = 1
Query:   16 SQIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAV 402
            + IECF DNPGILMYGNMCVVYT GIWLLLASF ELPVSTTHSTIGGIVGM MTYRGADCVVW+EE + FP++ G+  IV SW + PVLSG +A  LF  +R  VLRS ++  RS+ VFP LV  TIA+
Sbjct:   88 ADIECFTDNPGILMYGNMCVVYTNGIWLLLASFFELPVSTTHSTIGGIVGMTMTYRGADCVVWYEEADHFPYIKGVFAIVVSWALFPVLSGVVATLLFFVVRALVLRSEHALNRSMIVFPLLVTVTIAI 216          
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: D8LJQ6_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ6_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 2.380e-53
Identity = 84/129 (65.12%), Postives = 104/129 (80.62%), Query Frame = 1
Query:   19 QIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAVN 405
             +ECF DNPGILMYG MCVVYTTG+WLLLAS+LELPVSTTHSTIG I+GMA+ Y G+ CVVW++E++ FP+  G+A I  SWV+SP+ SG  ++ +FL +R FVLRSPN+  RS  VFP LV+ TIAVN
Sbjct:   49 NVECFLDNPGILMYGMMCVVYTTGMWLLLASYLELPVSTTHSTIGAIIGMAVAYAGSGCVVWYQESDIFPYFKGVAAIAVSWVLSPIFSGVASLLVFLTVRAFVLRSPNAFGRSFWVFPVLVMVTIAVN 177          
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: D8LJP9_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP9_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.320e-47
Identity = 72/131 (54.96%), Postives = 97/131 (74.05%), Query Frame = 1
Query:   19 QIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAVNGK 411
            Q+ CF DNPG+LMYG MCV+YTT +WLLLAS+LELPVS T STI  IVGM + Y G  CVVW  E+E FP   G+  I+  W++SP+++G  +  +FL +RTFVLRSP++ +RS  VFP LV+  +A++G+
Sbjct:    6 QVSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRACVVWHRESEHFPGFQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALDGE 136          
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: A0A7R9T173_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A0A7R9T173_9CHLO)

HSP 1 Score: 154 bits (388), Expect = 1.400e-44
Identity = 64/127 (50.39%), Postives = 95/127 (74.80%), Query Frame = 1
Query:   25 ECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAVN 405
            +CF D+PG+LMYG +CV+++  IWL++ASFLE+PVSTTHS +GG++GM M  RG+ CVVW  +++TFP++ G+A IV SW++SP++SG  +   FL +R  V+RS NS  R+   FP L+  T+ +N
Sbjct:   16 DCFNDDPGLLMYGCLCVIFSVAIWLVVASFLEMPVSTTHSCVGGMIGMTMVARGSSCVVWSAKSDTFPYIKGVAAIVVSWLLSPIVSGGFSFVFFLTLRALVMRSQNSYARARLAFPVLLACTLIIN 142          
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Match: A0A6S9IV20_HETAK (Phosphate transporter n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IV20_HETAK)

HSP 1 Score: 159 bits (401), Expect = 1.660e-43
Identity = 70/129 (54.26%), Postives = 97/129 (75.19%), Query Frame = 1
Query:   16 SQIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTIGGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAVALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAV 402
            + I+CF D+  +LMYG  CV++ TG+WLLLA+FL++PVSTTHS +GGI+GM +  +G  CVVW  +T+TFP+V G++ IV SW +SP+ SG  A ALFLF RTF+LRS NS  R+I  +P L+ +TI +
Sbjct:   86 ADIDCFMDDGPVLMYGMCCVIFCTGLWLLLATFLKMPVSTTHSVVGGIIGMTIAAKGGSCVVWHADTDTFPYVKGVSAIVVSWFLSPIFSGVGAAALFLFCRTFILRSENSYNRAIYFYPLLLGSTITL 214          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10011.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNL8_9PHAE1.990e-7081.20Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A6H5JNE7_9PHAE2.050e-6780.00Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G0K9_ECTSI8.260e-6780.77Phosphate transporter n=2 Tax=Ectocarpus siliculos... [more]
D7FWT9_ECTSI9.320e-6173.64Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D8LJQ4_ECTSI1.450e-5659.56High affinity phosphate transporter n=1 Tax=Ectoca... [more]
D7FZJ7_ECTSI5.650e-5668.99Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D8LJQ6_ECTSI2.380e-5365.12Phosphate transporter n=1 Tax=Ectocarpus siliculos... [more]
D8LJP9_ECTSI1.320e-4754.96High affinity phosphate transporter n=1 Tax=Ectoca... [more]
A0A7R9T173_9CHLO1.400e-4450.39Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A6S9IV20_HETAK1.660e-4354.26Phosphate transporter n=3 Tax=Heterosigma akashiwo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10011contigL-elsbetiae_contig10011:2065..2846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.5
Seed ortholog evalue2.6e-55
Seed eggNOG ortholog2880.D7G0K8
Preferred namePHO89
KEGG koko:K01280,ko:K03306,ko:K14640
KEGG TC2.A.20,2.A.20.2
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005315,GO:0005436,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006817,GO:0006820,GO:0008150,GO:0008324,GO:0012505,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015319,GO:0015370,GO:0015672,GO:0015698,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0035435,GO:0035725,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098661,GO:0098662
EggNOG free text desc.inorganic phosphate transmembrane transporter activity
EggNOG OGsCOG0306@1,KOG2493@2759
EC3.4.14.10
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko02000,ko03110
Exons2
Model size438
Cds size438
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815235.3250437-CDS-L-elsbetiae_contig10011:2064..23011622815235.3250437-CDS-L-elsbetiae_contig10011:2064..2301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10011 2065..2301 +
1691682786.5107849-CDS-L-elsbetiae_contig10011:2064..23011691682786.5107849-CDS-L-elsbetiae_contig10011:2064..2301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10011 2065..2301 +
1622815235.3358119-CDS-L-elsbetiae_contig10011:2645..28461622815235.3358119-CDS-L-elsbetiae_contig10011:2645..2846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10011 2646..2846 +
1691682786.5507777-CDS-L-elsbetiae_contig10011:2645..28461691682786.5507777-CDS-L-elsbetiae_contig10011:2645..2846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10011 2646..2846 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10011.59.1prot_L-elsbetiae_contig10011.59.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10011 2065..2846 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10011.59.1

>prot_L-elsbetiae_contig10011.59.1 ID=prot_L-elsbetiae_contig10011.59.1|Name=mRNA_L-elsbetiae_contig10011.59.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp
VSLFFSQIECFEDNPGILMYGNMCVVYTTGIWLLLASFLELPVSTTHSTI
GGIVGMAMTYRGADCVVWFEETETFPFVDGIAGIVASWVISPVLSGFIAV
ALFLFMRTFVLRSPNSAKRSIAVFPFLVIATIAVNGKRVNVLCGC*
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mRNA from alignment at L-elsbetiae_contig10011:2065..2846+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10011.59.1 ID=mRNA_L-elsbetiae_contig10011.59.1|Name=mRNA_L-elsbetiae_contig10011.59.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=782bp|location=Sequence derived from alignment at L-elsbetiae_contig10011:2065..2846+ (Laminarionema elsbetiae ELsaHSoW15)
GTTTCATTGTTCTTTTCTCAGATCGAGTGCTTCGAGGACAACCCGGGCAT CCTCATGTACGGCAACATGTGCGTCGTGTACACCACCGGAATCTGGCTCC TACTGGCGTCCTTCCTCGAGCTGCCCGTGTCCACCACTCACTCCACCATC GGAGGCATCGTCGGGATGGCCATGACCTACCGTGGCGCCGACTGCGTCGT GTGGTTCGAGGAGACCGAGACTTTCCCCTTTGTGGACGTGAGTACGCCCT TACATCTTTACCTACCTGTGGAACCGTTGCTGTCAACCTGAAACCGGGCC TTGATCTGTGGAACCGTTGCTGTCAACTTGAAACTGGGCCTTGACCGATC GGTCTGTACTTCGGTGTTGTAAAATCGTCATCGCATGCCGTATGTATATG CACGATAAAATGCATGTTTTTCACACCTACCGATCGATGCTCACCATCCT CAAATCAGGCTATTGTATGATTCATCCACAACCCTCTTTTCTACGTACCA CGCCTCCGCCTTGCTGCTCCCGAACAAACAATCTTTCCCATCAATCGAAT GGCACCGATCGACTGATTGGGCGAATCACAGGGTATTGCCGGCATCGTGG CCTCTTGGGTGATCTCCCCCGTTCTGTCGGGGTTCATCGCCGTTGCCCTG TTCCTGTTCATGAGGACCTTCGTGCTGCGGTCGCCCAACTCCGCTAAGAG ATCCATCGCCGTCTTCCCCTTCCTGGTGATCGCTACCATCGCCGTCAACG GTAAGCGAGTGAACGTCTTGTGTGGGTGTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10011:2065..2846+

>mRNA_L-elsbetiae_contig10011.59.1 ID=mRNA_L-elsbetiae_contig10011.59.1|Name=mRNA_L-elsbetiae_contig10011.59.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig10011:2065..2846+ (Laminarionema elsbetiae ELsaHSoW15)
GTTTCATTGTTCTTTTCTCAGATCGAGTGCTTCGAGGACAACCCGGGCAT
CCTCATGTACGGCAACATGTGCGTCGTGTACACCACCGGAATCTGGCTCC
TACTGGCGTCCTTCCTCGAGCTGCCCGTGTCCACCACTCACTCCACCATC
GGAGGCATCGTCGGGATGGCCATGACCTACCGTGGCGCCGACTGCGTCGT
GTGGTTCGAGGAGACCGAGACTTTCCCCTTTGTGGACGTTTCATTGTTCT
TTTCTCAGATCGAGTGCTTCGAGGACAACCCGGGCATCCTCATGTACGGC
AACATGTGCGTCGTGTACACCACCGGAATCTGGCTCCTACTGGCGTCCTT
CCTCGAGCTGCCCGTGTCCACCACTCACTCCACCATCGGAGGCATCGTCG
GGATGGCCATGACCTACCGTGGCGCCGACTGCGTCGTGTGGTTCGAGGAG
ACCGAGACTTTCCCCTTTGTGGACGGTATTGCCGGCATCGTGGCCTCTTG
GGTGATCTCCCCCGTTCTGTCGGGGTTCATCGCCGTTGCCCTGTTCCTGT
TCATGAGGACCTTCGTGCTGCGGTCGCCCAACTCCGCTAAGAGATCCATC
GCCGTCTTCCCCTTCCTGGTGATCGCTACCATCGCCGTCAACGGTAAGCG
AGTGAACGTCTTGTGTGGGTGTTGAGGTATTGCCGGCATCGTGGCCTCTT
GGGTGATCTCCCCCGTTCTGTCGGGGTTCATCGCCGTTGCCCTGTTCCTG
TTCATGAGGACCTTCGTGCTGCGGTCGCCCAACTCCGCTAAGAGATCCAT
CGCCGTCTTCCCCTTCCTGGTGATCGCTACCATCGCCGTCAACGGTAAGC
GAGTGAACGTCTTGTGTGGGTGTTGA
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