mRNA_L-elsbetiae_contig10006.55.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10006.55.1
Unique NamemRNA_L-elsbetiae_contig10006.55.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10006.55.1 vs. uniprot
Match: A0A6H5JTH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH2_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 3.570e-75
Identity = 171/380 (45.00%), Postives = 221/380 (58.16%), Query Frame = 1
Query:    4 VLGKGGRTEQVDAGDGLGRGILMHAARSNHVETFREVLRMCREDS-----------GGRNEEEHSEPTLSVPAATDARLVLEA----DILGMNCLHHAAEAGCFEVLKEVFDIFQEAGKETYKADNARRTPLMLVLRNESRCDQDE-----------LKLKFDILYKGWEDSPHDSGANTRKKGWMTPSSVPPQCPPVSGKTKAIETQAVTELMHAARGGLASLELALSYHPLNIKRDG-GDFTVDLDEALAVEVELENGVWGKSTSTDNAVWGRALLLAAAAKLGDVDVISQILNAIEKGKFSL-KRGEDAKIVSLPEVASLANDEPMALPINEEVKNTIEAISDRYLSVFSYAIMSGRTDAVKLINDLVLRTFRGDTE 1059
            VLGKG   +Q +  DGLGRGILMHAARSNHVE F+EVL  CRE +           GG+ E    +   +  A+ DA L+L+     D +G NCLHHAAEAG + VL EV ++     +E   AD   RTP+M VLRN+S   Q +           L+ K   LY+   D+    G   R  GWM PS VP   P V  K + ++T+AVTEL+HAARGGL SLELAL+  PL  +      FTV LD+ALAV + ++     +   T    WG ALLLAAAAKLG +DV+  +L AI+KGKF+L KR E+ +   L +V   A+   + LP  + V+  + AI  R  SVFSYAI+SGRTDA++L+ DLV   F   TE
Sbjct:  127 VLGKGELVQQFELVDGLGRGILMHAARSNHVENFKEVLNGCREVADCMLPHDKPTVGGQTESLDPQLPATDTASADAGLLLQVLGKVDRMGKNCLHHAAEAGSYAVLDEVVELCGSLYEEMNTADIMGRTPIMYVLRNDSCRGQAQQGPTLTLREQSLRKKLYELYEALPDATCTRGTPVRT-GWMKPSRVPAPIPTVPKKNR-VDTRAVTELIHAARGGLVSLELALNELPLASRNSTESGFTVALDDALAVNITIDKAQEEQFHRTK--AWGWALLLAAAAKLGGIDVLYHVLLAIKKGKFNLVKRSENDRDFRLAKVERPADGGRVELPRGDRVQAAVRAIKTRAKSVFSYAILSGRTDAMELVYDLVRGLFGNYTE 502          
BLAST of mRNA_L-elsbetiae_contig10006.55.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 9.570e-73
Identity = 174/383 (45.43%), Postives = 223/383 (58.22%), Query Frame = 1
Query:    4 VLGKGGRTEQVDAGDGLGRGILMHAARSNHVETFREVLRMCREDS-----------GGRNEEEHSEPTLSVPAATDARLVLE----ADILGMNCLHHAAEAGCFEVLKEVFDIFQEAGKETYKADNARRTPLMLVLRNESRCDQDE-----------LKLKFDILYKGWEDS--PHDSGANTRKKGWMTPSSVPPQCPPVSGKTKAIETQAVTELMHAARGGLASLELALSYHPLNIKRDG-GDFTVDLDEALAVEVELENGVWGKSTSTDNAVWGRALLLAAAAKLGDVDVISQILNAIEKGKFSL-KRGEDAKIVSLPEVASLANDEPMALPINEEVKNTIEAISDRYLSVFSYAIMSGRTDAVKLINDLVLRTFRGDTEE 1062
            VLGKG   +Q +  DGLGRGILMHAARSNHV+ F+EV   CRE +           GG+ E    +   +  A+ D  L+ E    AD +G NCLHHAAEAG + VL EV  +     +E   AD   RTP+M VLRN+S   Q++           L+ KF  LY+  +D+  P D+   T   GWM PS VPP    V   T+ ++T+AVTELMHAARGGL SLELAL+  PL  +    G FTV LD ALAV + + N    +  S     WG ALLLAAAAKLGD+DV+  +L AI+KGKF+L K GE+     L +V   A    + LP  + V+  + AI+ R  SVFSYAI+SGRTDA++L+ DLV   F   T +
Sbjct:  116 VLGKGELVQQFELVDGLGRGILMHAARSNHVDNFKEVFNRCREVADRMRPHDEPTVGGQTESLDPQLPATDTASADIGLLREVLGKADRIGKNCLHHAAEAGSYAVLHEVVKLCCSVYEEMNTADIMGRTPIMYVLRNDSCRGQEQQGSTLALKEESLRKKFHELYEALQDATCPQDTPVKT---GWMEPSRVPPPSLAVPKGTR-VDTRAVTELMHAARGGLVSLELALNKLPLASRNIAEGGFTVALDNALAVNMTIGNT---QEQSHRTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFTLVKHGENDHDFRLAKVERPAGGGWVELPRGDRVQEAVRAINTRGKSVFSYAILSGRTDAMELVYDLVRGLFGDKTSQ 491          
BLAST of mRNA_L-elsbetiae_contig10006.55.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 6.280e-70
Identity = 172/390 (44.10%), Postives = 223/390 (57.18%), Query Frame = 1
Query:    4 VLGKGGRTEQVDAGDGLGRGILMHAARSNHVETFREVLRMCREDS--------------GGRNE-----------EEHSEPTLSVPAATDARLVLE-----ADILGMNCLHHAAEAGCFEVLKEVFDIFQEAGKETYKADNARRTPLMLVLRN-------ESRCDQDELKLKFDILYKGWEDSPHDSGANTRKKGWMTPSSVPPQCPPVSGKTKAIETQAVTELMHAARGGLASLELALSYHPLNIKRDGGD-FTVDLDEALAVEVELENGVWGKSTSTDN--AVWGRALLLAAAAKLGDVDVISQILNAIEKGKFSLKRGEDAKIVSLPEVASLANDEPMALPINEEVKNTIEAISDRYLSVFSYAIMSGRTDAVKLINDLVLRTFRGD 1053
            VLGKGG  EQ +A DGLGRGILMHAARSNHV+TF++V   CR+ +               GR E           E  S+ T   P  +   L+L       D  GM CLHHAAEAG  EVL EV         +   +D + RTP+MLVLRN       E  C Q +L+ KF IL+      P  +    R  GWM PS + PQ  P   +T  +ET+AVTEL+HAARGG+ SLELAL+    N K D  D F V LD ALAVEV ++ G W +S    +   +WGRALLLAAAA+LGDVDV+  +L AIE  +F L+  +DA    LPE     ++ P A+P++ +++  +  I+ R +S+FS AI+S R +AV+LI DLV+R F  D
Sbjct:  123 VLGKGGVIEQFEALDGLGRGILMHAARSNHVDTFKDVFDKCRKAAESVRLHDQSNAVANDGRIEIPEVPLYGFRGERPSDSTTQTPEKSSNSLLLREVLGTVDRKGMTCLHHAAEAGSSEVLCEVVKECGSHWADLGASDRSGRTPIMLVLRNAFCCEGEEHTCRQTDLEDKFGILFDEIPLEPIRATGGHRYIGWMQPSRIQPQRLPAPKQTP-VETRAVTELIHAARGGVVSLELALNKALPNSKTDSEDGFKVHLDSALAVEVCID-GSWRQSQDDHHRTVIWGRALLLAAAARLGDVDVLYHVLVAIEDDEFFLE-ADDAGKFRLPERPIPVDETPTAIPVSNKLREVLGMINSRNVSLFSLAILSRRHEAVELIFDLVVRLFGED 509          
BLAST of mRNA_L-elsbetiae_contig10006.55.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.350e-47
Identity = 143/367 (38.96%), Postives = 198/367 (53.95%), Query Frame = 1
Query:    4 VLGKGGRTEQVDAGDGLGRGILMHAARSNHVETFREVL----RMCREDSGGRNEEEHSEPTLSVPAATDARLVLEADILGMNCLHHAAEAGCFEVLKEVFDIFQEAGKETY-KADNARRTPLMLVLRNESRCDQ--DELKLKFDILYK------GWEDSP---HDSGANTRKKGWMTPSSVPPQCPPVSGKTKAIETQAVTELMHAARGGLASLELALSYHPLNIKR--DGGDFTVDLDEALAVEVELENGVWGKSTSTDNAVWGRALLLAAAAKLGDVDVISQILNAIEKGKFSLKRGEDAKIVSLPEVASLANDEPMALPIN--EEVKNTIEAISDRYLSVFSYAIMSGRTDAVKLINDLVLRTF 1044
             LGKGG  EQ+ A DG GR +LMHAARSN+ + + E++    ++    S G  E++H                      GMNCLHHAAEAGC EVL +V   + +AG  +Y + DN  RTP+M VL + SR ++  D L+ KF +LY       G +D     HD G    K+GWM  + VP Q   +S   +  + + VTELMHAARGGL SLELAL+  PL   R  DG   ++ LD AL VE   +     +        WG+ LLLAAAA+ GD+DV+  +L AI+  KF+ +   D   +   E + LA      LP    E+V+  +  +S    S+FS AI+SG+T AVK +  L+++ F
Sbjct:  132 ALGKGGLLEQLGAVDGEGRTMLMHAARSNNSDAYDEIVGIYFKVVPLTSSGYTEKDHK---------------------GMNCLHHAAEAGCSEVLGKVIKKYSDAGGSSYAERDNNNRTPVMCVLSDASREERADDSLRDKFTLLYSNMSTTCGEQDEKVCTHDGGH--AKQGWMEMTDVPTQ--QISRSEEISKARGVTELMHAARGGLVSLELALN-EPLPSSRLEDG---SISLDGALNVEA-CDEPASDEPRWEPQPAWGKGLLLAAAAERGDIDVLHVVLTAIKDNKFTKEPNTDRFTLRKQE-SRLAE-----LPYGDGEKVRTVVREMSKGGKSLFSEAILSGQTVAVKHVYRLIVKLF 462          
BLAST of mRNA_L-elsbetiae_contig10006.55.1 vs. uniprot
Match: A0A6H5JNN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN7_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 3.320e-47
Identity = 143/365 (39.18%), Postives = 192/365 (52.60%), Query Frame = 1
Query:    4 VLGKGGRTEQVDAGDGLGRGILMHAARSNHVETFREVLRMCREDSGGRNEEEHSEPTLSVPAATDARLVLEADILGMNCLHHAAEAGCFEVLKEVFDIFQEAGKETY-KADNARRTPLMLVLRNESRCDQ--DELKLKFDILYKGW--------EDSPHDSGANTRKKGWMTPSSVPPQCPPVSGKTKAIETQA--VTELMHAARGGLASLELALSYHPLNIKRDGGDFTVDLDEALAVEVELENGVWGKSTSTDNAVWGRALLLAAAAKLGDVDVISQILNAIEKGKFSLKRGEDAKIVSLPEVASLANDEPMALPINEEVKNTIEAISDRYLSVFSYAIMSGRTDAVKLINDLVLRTFRGDTE 1059
             LGKGG  EQ++A DG GR +LMHAARSN    F E++ +                + +VP  +        D  GMNCLHHAAEAGC EVL +V   + +AG  +Y + DN  RTP+M VL + +R  +  D L  KF +LY           E    D G +  K+GWM  + V  Q   +S K+  I  +A  VTELMHAARGGL SLELAL+  PL   R   D ++ LD AL V+   +     K        WG+ LLLAAAA+ GD+DV+  +L AI+ G F+ K   D   +   E           LP  E VK  +  +S    S+FS AI+SGRT AV+ +  L+++ F G+T+
Sbjct:  140 ALGKGGLIEQLEAVDGEGRTMLMHAARSNDGNAFDEIVGIY---------------SKAVPLTSSDYTA--KDRKGMNCLHHAAEAGCSEVLGKVIKKYSDAGGSSYAERDNNNRTPVMYVLSDATRDVRAGDSLLKKFTLLYSNMPTTCGKQDEKVSVDPGEHA-KEGWMEMTDVLTQRIQIS-KSHEITRKARGVTELMHAARGGLGSLELALN-EPLPSSRLA-DGSISLDIALNVKA-CDEAASDKPRWEPQPAWGKGLLLAAAAERGDIDVLHIVLTAIQDGVFTKKPNADRFTLRRHE------GRRAGLPFGENVKTVVREMSKGGKSLFSQAILSGRTVAVEHVYLLIVKLF-GETD 475          
BLAST of mRNA_L-elsbetiae_contig10006.55.1 vs. uniprot
Match: D7FNX3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX3_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 1.150e-34
Identity = 121/350 (34.57%), Postives = 172/350 (49.14%), Query Frame = 1
Query:    4 VLGKGGRTEQVDAGDGLGRGILMHAARSNHVETFREVLRMCREDSGGRNEEEHSEPTLSVPA----ATDARLVLEADILGMNCLHHAAEAGCFEVLKEVFDIFQEAG---KETYKADNARRTPLMLVLRNE--SRCDQDELKLKFDILYKGWEDSPHDSGANTRKKGWMTPSSVPPQCPPVSGKTKAIETQAVTELMHAARGGLASLELALSYHPLNI--KRDGGDFTVDLDEALAVEVELENGVWGKSTSTDNAVWGRALLLAAAAKLGDVDVISQILNAIEKGKFSLKRGEDAKIVSLPEVASLANDEPMALPINEE---VKNTIEAISDRYLSVFSYAIMSGRTDAV 1011
            VLG+GG  EQV A DG+GR ++M+AAR N VE F  V  M            H + T S        + +  + + D    N LHHAAEAGC +VL EV  + +      K  +K D    TPL  VLR +      +DE++ KF+ L+            ++ K  +M P  V P   P  G+T  +   AVTEL+HAARGGL SL+L L+   L    ++      V ++EAL V V+ + G        +   WG  +LLAAAAK G VDV+  +++AI+ G F            + +V+  A D+  A    +E   V   IEAI     S+F  A++SG+ +AV
Sbjct:  140 VLGRGGLVEQVAARDGMGRTVVMYAARGNDVEVFHRVWNMYH----------HHQRTFSAAGEGLGGSPSGALTKVDHTERNVLHHAAEAGCLDVLCEVLLLVRRISGDSKTMHKPDKNGLTPLHHVLRAKYGEPEGRDEIRPKFEKLW-----------LHSNKGSFMVPRRVMPM--PCVGRT-GVAVMAVTELIHAARGGLPSLKLVLAKIRLMKFWRKKPDSAVVTVNEALRVTVDGKKGDEDTPGQGELDAWGWGMLLAAAAKGGHVDVLETVVHAIKTGSF------------VEDVSERAADQGQATNTCQELEPVDRAIEAILSSGSSLFGLAVLSGKVEAV 453          
BLAST of mRNA_L-elsbetiae_contig10006.55.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 9.720e-24
Identity = 114/388 (29.38%), Postives = 168/388 (43.30%), Query Frame = 1
Query:    4 VLGKGGRTEQVDAGDGLGRGILMHAARSNHVETFREVLRMCR----------EDSGGRNEEEHSEPTLSVPAATDARLVLEADILGMNCLHHAAEAGCFEVLKEVFDIFQEAGKET----YKADNARRTPLMLVLR---NESRCDQD-----ELKLKFDILYKGWEDSPHDSGANTRKKGWMTPSSVPPQCPPVSGKTKAIETQAVTELMHAARGGLASLELALSYHPLNIKRDG--GDFTVDLDEALAVEV-ELENG-------------VWGKSTSTDNAVWGRALLLAAAAKLGDVDVISQILNAIEKGKFSLKRGEDAKIVSLPEVASLANDEPMALPINEE---VKNTIEAISDRYLSVFSYAIMSGRTDAVKLINDLVLRTF 1044
             LGKGG  EQ+ A D LGR I+M+AAR N V+ F+   +M            E  GG        P++++P         + D  G N LHHAAEAGC +V+ E+  + +     T    +K D    TPL  +LR    E     D     E   KF+ L+               K  +M    V P   P  G+  A+   A+T+++HAARGGL SL+L L+   L     G   +  V ++EAL V V E   G                     +   WG  +LL AAAK G VDV+  +++AI+ G F            +  ++    D+   +  NEE   V   +EAI      +F  A++SG+ +AV  +   + + +
Sbjct:  124 ALGKGGLVEQIAASDDLGRNIVMYAARGNSVDVFKRAWKMYHYHQRTFASPVEGWGGA-------PSITLP---------KVDYTGRNLLHHAAEAGCLDVIHEILLMVRNLSDSTNVTMHKPDKNGLTPLHHLLRAKYGEPEVPDDIEDPAEFPQKFEKLW-----------FYGSKGSFMARRKVMPL--PRDGRA-AVAVSAITDVIHAARGGLPSLQLILAKICLTKCWQGKPNNTVVTIEEALCVAVHETMEGEDEXXXXXXXXXXXXXXXXXXELDAWGWGMLLTAAAKGGHVDVLEHVVHAIKTGSF------------VEGLSDRNADQRHTVYTNEELQRVDRAVEAIVSSGSYLFGQAVLSGKAEAVLWVYQFLAQRY 469          
BLAST of mRNA_L-elsbetiae_contig10006.55.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.360e-22
Identity = 112/378 (29.63%), Postives = 162/378 (42.86%), Query Frame = 1
Query:    4 VLGKGGRTEQVDAGDGLGRGILMHAARSNHVETFREVLRMCREDSGGRNEEEHSEPTLSVPAATDARLVLEADILGMNCLHHAAEAGCFEVLKEVF----DIFQEAGKETYKADNARRTPLMLVLR---NESRCDQD-----ELKLKFDILYKGWEDSPHDSGANTRKKGWMTPSSVPPQCPPVSGKTKAIETQAVTELMHAARGGLASLELALSYHPLNIKRDG--GDFTVDLDEALAVEV-ELENG-------------VWGKSTSTDNAVWGRALLLAAAAKLGDVDVISQILNAIEKGKFSLKRGEDAKIVSLPEVASLANDEPMALPINEE---VKNTIEAISDRYLSVFSYAIMSGRTDAVKLINDLVLRTF 1044
             LGKGG  EQ+ A D LGR I+M+AAR N V+ F+   +M        ++   S P      A    L  + D  G N LHHAAEAGC +VL E+      +   A    +K D    TPL  +LR    E     D     E   KF+ L   W      S    RK   +          P  G+   +   A+T+++HAARGGL SL+L L+   L     G   +  V ++EAL V V E   G                     +   WG  +LLAAAAK G VDV+  +++AI+ G F            +  ++    D+   +  N+E   V   +EAI      +F  A++SG+ + V  +   + + +
Sbjct:  115 ALGKGGLVEQIAASDDLGRNIVMYAARGNSVDVFKRAWKMYH-----YHQRTFSSPVEGWGGAPSITLT-KVDYTGRNLLHHAAEAGCLDVLNEILLMVRKLSDSANGTMHKPDKNGLTPLHHLLRAKYGEPEVPGDIEDPAEFPQKFEKL---WLYGSKGSFMARRKVMAL----------PRDGRAD-VAVSAITDVIHAARGGLPSLQLILAKICLTKFWQGKPNNTVVTIEEALCVAVHETMEGEDEXXXXXXXXXXXXXXXXXXELDAWGWGMLLAAAAKGGHVDVLEHVVHAIKTGSF------------VEGLSDRNADQLHTVYTNQELQRVDRAVEAIVSSGSYLFGQAVLSGKVEVVLWVYQFLAQRY 460          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10006.55.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JTH2_9PHAE3.570e-7545.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH99_ECTSI9.570e-7345.43Ankyrin Repeat Transient Receptor Potential Channe... [more]
D8LHA0_ECTSI6.280e-7044.10Transient Receptor Potential Channel. Partial sequ... [more]
D8LH97_ECTSI1.350e-4738.96Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JNN7_9PHAE3.320e-4739.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNX3_ECTSI1.150e-3434.57Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JB40_9PHAE9.720e-2429.38Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FX79_ECTSI1.360e-2229.63Ankyrin Repeat Transient Receptor Potential Channe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10006contigL-elsbetiae_contig10006:1298..2681 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score258.1
Seed ortholog evalue6.2e-66
Seed eggNOG ortholog2880.D8LH99
Hectar predicted targeting categoryother localisation
EggNOG free text desc.calcium ion transmembrane transport
EggNOG OGsKOG3676@1,KOG3676@2759
Ec32 ortholog descriptionTransient Receptor Potential Channel. Partial sequence
Ec32 orthologEc-24_001110.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1080
Cds size1080
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815234.8494108-CDS-L-elsbetiae_contig10006:1297..15581622815234.8494108-CDS-L-elsbetiae_contig10006:1297..1558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10006 1298..1558 -
1691682786.0117342-CDS-L-elsbetiae_contig10006:1297..15581691682786.0117342-CDS-L-elsbetiae_contig10006:1297..1558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10006 1298..1558 -
1622815234.86026-CDS-L-elsbetiae_contig10006:1862..26811622815234.86026-CDS-L-elsbetiae_contig10006:1862..2681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10006 1863..2681 -
1691682786.029618-CDS-L-elsbetiae_contig10006:1862..26811691682786.029618-CDS-L-elsbetiae_contig10006:1862..2681Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10006 1863..2681 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10006.55.1prot_L-elsbetiae_contig10006.55.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10006 1298..2681 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10006.55.1

>prot_L-elsbetiae_contig10006.55.1 ID=prot_L-elsbetiae_contig10006.55.1|Name=mRNA_L-elsbetiae_contig10006.55.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=360bp
MVLGKGGRTEQVDAGDGLGRGILMHAARSNHVETFREVLRMCREDSGGRN
EEEHSEPTLSVPAATDARLVLEADILGMNCLHHAAEAGCFEVLKEVFDIF
QEAGKETYKADNARRTPLMLVLRNESRCDQDELKLKFDILYKGWEDSPHD
SGANTRKKGWMTPSSVPPQCPPVSGKTKAIETQAVTELMHAARGGLASLE
LALSYHPLNIKRDGGDFTVDLDEALAVEVELENGVWGKSTSTDNAVWGRA
LLLAAAAKLGDVDVISQILNAIEKGKFSLKRGEDAKIVSLPEVASLANDE
PMALPINEEVKNTIEAISDRYLSVFSYAIMSGRTDAVKLINDLVLRTFRG
DTEELLEKV*
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mRNA from alignment at L-elsbetiae_contig10006:1298..2681-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10006.55.1 ID=mRNA_L-elsbetiae_contig10006.55.1|Name=mRNA_L-elsbetiae_contig10006.55.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1384bp|location=Sequence derived from alignment at L-elsbetiae_contig10006:1298..2681- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTTCTCGGTAAGGGCGGGCGTACGGAGCAGGTGGACGCTGGGGATGG GCTTGGTAGGGGGATCCTCATGCACGCGGCACGGAGCAACCACGTCGAAA CCTTCAGAGAGGTGCTTCGTATGTGCAGGGAGGACAGCGGTGGCCGGAAT GAGGAGGAGCACTCCGAGCCAACTCTTTCGGTGCCGGCGGCCACTGATGC GCGGCTGGTGCTTGAGGCCGACATCCTCGGCATGAACTGCCTCCACCACG CCGCCGAAGCGGGTTGTTTCGAGGTGCTGAAAGAGGTGTTCGACATTTTC CAGGAGGCGGGGAAAGAGACCTACAAGGCGGACAACGCTAGGCGCACCCC GCTCATGCTGGTCCTGAGGAACGAATCTCGCTGCGATCAAGACGAGCTGA AACTTAAATTCGACATACTTTACAAGGGTTGGGAAGATTCGCCGCATGAT TCAGGAGCAAACACCAGGAAAAAAGGGTGGATGACCCCGAGCTCCGTGCC ACCGCAGTGCCCGCCGGTTTCGGGGAAGACGAAGGCCATCGAGACTCAAG CGGTAACGGAACTGATGCATGCCGCCCGAGGCGGCTTGGCGTCTTTGGAG CTAGCCCTCAGCTATCATCCACTGAACATCAAGAGGGATGGCGGAGATTT CACGGTGGACCTCGACGAGGCGCTCGCGGTTGAAGTTGAATTGGAGAATG GAGTTTGGGGGAAGTCGACCTCAACCGACAACGCCGTGTGGGGAAGGGCT CTGTTGTTGGCGGCGGCCGCAAAACTCGGCGACGTGGATGTAATTTCTCA GATCCTGAATGCCATCGAGGTCGGTCGGAACTGCTGTATGGGGGAGGTGG TTCATTTCAATCTTGCAATCTGGTTAAGGCCTTGTGGTTTGATGGTTTGC CAATAAATATCGAGGCTGGGGTTTGACTGAATATTCTGAAAATCAAGCCT GGGTTCATATGTACCATACACCCCAAATGGCGCATTGGTCAGCATCGAAT TCTTGTCCTTTCGCACAACAACCTGCTCGTTTTTCTTGAAACAAACAAGA AACGAGGGATGGGATCAAGTGGAAACCAATTGAGATGTTCTGTCGCGCAC TGCTGTTAATGTGTTCATCACAGAAAGGGAAATTCAGCCTGAAGCGAGGA GAAGACGCCAAAATAGTCAGCCTCCCCGAGGTAGCAAGTCTGGCGAACGA CGAACCGATGGCGTTGCCGATAAACGAGGAAGTGAAGAACACCATCGAGG CGATCAGCGACCGCTACTTATCCGTGTTTTCGTACGCGATCATGTCCGGC CGTACGGACGCCGTGAAGCTCATCAACGACCTCGTACTCCGCACCTTTCG CGGCGATACAGAGGAGCTATTAGAAAAGGTGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10006:1298..2681-

>mRNA_L-elsbetiae_contig10006.55.1 ID=mRNA_L-elsbetiae_contig10006.55.1|Name=mRNA_L-elsbetiae_contig10006.55.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2160bp|location=Sequence derived from alignment at L-elsbetiae_contig10006:1298..2681- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTTCTCGGTAAGGGCGGGCGTACGGAGCAGGTGGACGCTGGGGATGG
GCTTGGTAGGGGGATCCTCATGCACGCGGCACGGAGCAACCACGTCGAAA
CCTTCAGAGAGGTGCTTCGTATGTGCAGGGAGGACAGCGGTGGCCGGAAT
GAGGAGGAGCACTCCGAGCCAACTCTTTCGGTGCCGGCGGCCACTGATGC
GCGGCTGGTGCTTGAGGCCGACATCCTCGGCATGAACTGCCTCCACCACG
CCGCCGAAGCGGGTTGTTTCGAGGTGCTGAAAGAGGTGTTCGACATTTTC
CAGGAGGCGGGGAAAGAGACCTACAAGGCGGACAACGCTAGGCGCACCCC
GCTCATGCTGGTCCTGAGGAACGAATCTCGCTGCGATCAAGACGAGCTGA
AACTTAAATTCGACATACTTTACAAGGGTTGGGAAGATTCGCCGCATGAT
TCAGGAGCAAACACCAGGAAAAAAGGGTGGATGACCCCGAGCTCCGTGCC
ACCGCAGTGCCCGCCGGTTTCGGGGAAGACGAAGGCCATCGAGACTCAAG
CGGTAACGGAACTGATGCATGCCGCCCGAGGCGGCTTGGCGTCTTTGGAG
CTAGCCCTCAGCTATCATCCACTGAACATCAAGAGGGATGGCGGAGATTT
CACGGTGGACCTCGACGAGGCGCTCGCGGTTGAAGTTGAATTGGAGAATG
GAGTTTGGGGGAAGTCGACCTCAACCGACAACGCCGTGTGGGGAAGGGCT
CTGTTGTTGGCGGCGGCCGCAAAACTCGGCGACGTGGATGTAATTTCTCA
GATCCTGAATGCCATCGAGATGGTTCTCGGTAAGGGCGGGCGTACGGAGC
AGGTGGACGCTGGGGATGGGCTTGGTAGGGGGATCCTCATGCACGCGGCA
CGGAGCAACCACGTCGAAACCTTCAGAGAGGTGCTTCGTATGTGCAGGGA
GGACAGCGGTGGCCGGAATGAGGAGGAGCACTCCGAGCCAACTCTTTCGG
TGCCGGCGGCCACTGATGCGCGGCTGGTGCTTGAGGCCGACATCCTCGGC
ATGAACTGCCTCCACCACGCCGCCGAAGCGGGTTGTTTCGAGGTGCTGAA
AGAGGTGTTCGACATTTTCCAGGAGGCGGGGAAAGAGACCTACAAGGCGG
ACAACGCTAGGCGCACCCCGCTCATGCTGGTCCTGAGGAACGAATCTCGC
TGCGATCAAGACGAGCTGAAACTTAAATTCGACATACTTTACAAGGGTTG
GGAAGATTCGCCGCATGATTCAGGAGCAAACACCAGGAAAAAAGGGTGGA
TGACCCCGAGCTCCGTGCCACCGCAGTGCCCGCCGGTTTCGGGGAAGACG
AAGGCCATCGAGACTCAAGCGGTAACGGAACTGATGCATGCCGCCCGAGG
CGGCTTGGCGTCTTTGGAGCTAGCCCTCAGCTATCATCCACTGAACATCA
AGAGGGATGGCGGAGATTTCACGGTGGACCTCGACGAGGCGCTCGCGGTT
GAAGTTGAATTGGAGAATGGAGTTTGGGGGAAGTCGACCTCAACCGACAA
CGCCGTGTGGGGAAGGGCTCTGTTGTTGGCGGCGGCCGCAAAACTCGGCG
ACGTGGATGTAATTTCTCAGATCCTGAATGCCATCGAGAAAGGGAAATTC
AGCCTGAAGCGAGGAGAAGACGCCAAAATAGTCAGCCTCCCCGAGGTAGC
AAGTCTGGCGAACGACGAACCGATGGCGTTGCCGATAAACGAGGAAGTGA
AGAACACCATCGAGGCGATCAGCGACCGCTACTTATCCGTGTTTTCGTAC
GCGATCATGTCCGGCCGTACGGACGCCGTGAAGCTCATCAACGACCTCGT
ACTCCGCACCTTTCGCGGCGATACAGAGGAGCTATTAGAAAAGGTGTGAA
AAGGGAAATTCAGCCTGAAGCGAGGAGAAGACGCCAAAATAGTCAGCCTC
CCCGAGGTAGCAAGTCTGGCGAACGACGAACCGATGGCGTTGCCGATAAA
CGAGGAAGTGAAGAACACCATCGAGGCGATCAGCGACCGCTACTTATCCG
TGTTTTCGTACGCGATCATGTCCGGCCGTACGGACGCCGTGAAGCTCATC
AACGACCTCGTACTCCGCACCTTTCGCGGCGATACAGAGGAGCTATTAGA
AAAGGTGTGA
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