mRNA_L-elsbetiae_contig10.36.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10.36.1
Unique NamemRNA_L-elsbetiae_contig10.36.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: M2VYX9_GALSU (H(+)-transporting two-sector ATPase n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VYX9_GALSU)

HSP 1 Score: 679 bits (1752), Expect = 7.820e-240
Identity = 365/543 (67.22%), Postives = 416/543 (76.61%), Query Frame = 1 
Query:    1 VIDAVFSSGILPKIYNALEVQSKEGPIICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPV---------------VDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT----------------------QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV------KF-----------------------------SMGLNIRVIAPDGLIWDTTADGVVLPSLTGQLGILTGHAPLITSLEIGILRIKENSKWTPIIVLGGFAVIQNDEVLVLISGVEEVIKEDYDKAKEILVKA 1413
            VID  F +G LPKIYNA+ +  K   I CEVQQLLGDNRVRA+AM++TDGLQRG+  ID  S I+VPV               VD L   + +  LPIHR +P FT LETKP+IFETGIKV+DLLAPY+RGGKIGLFGGAGVGKTVLIMELINNIAK+HGGVSVFGGVGERT                      +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRD NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMGALQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLA+KGIYPAVDPLDSTSTMLQP IVGDEHY TAQ VKE LQRYKELQDIIAILG+DELSEEDRL V RARKIERFLSQPFFVAEV      K+                              MGLNIRVIAPD ++W+  A+ ++LP+ TGQLGIL+GHAPL+++L+IG++R++  + WT I++ GGFA ++NDE+++L++G EE    + DKA + L+++
Sbjct:   18 VIDIEFPNGKLPKIYNAITINHKNKTITCEVQQLLGDNRVRAVAMNSTDGLQRGIEAIDTGSAITVPVGKCTLGRIFNVLGEPVDELGAILTDTKLPIHRSSPLFTQLETKPSIFETGIKVIDLLAPYKRGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFGGVGERTREGNDLYVEMKESKVINENNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDNNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGALQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPQIVGDEHYATAQRVKENLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLKESINGFKMILNGELDDLPEQAFYLVEMGLNIRVIAPDRIVWNAKAEEIILPTSTGQLGILSGHAPLLSALDIGVMRVRIKNNWTSIVLFGGFAEVENDEIIILVNGAEEASVINLDKANKDLIES 560
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: ATPB_FUCVE (ATP synthase subunit beta, chloroplastic n=207 Tax=Phaeophyceae TaxID=2870 RepID=ATPB_FUCVE)

HSP 1 Score: 655 bits (1689), Expect = 3.540e-232
Identity = 350/406 (86.21%), Postives = 359/406 (88.42%), Query Frame = 1 
Query:    1 VIDAVFSSGILPKIYNALEVQSKEGPIICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPV---------------VDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT----------------------QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV 1107
            VIDAVFSSG+LPKIYNALEV+ K+GPIICEVQQLLGDNRVRAI+MSATDGLQRGV V D  +PISVPV               +DNL D+   ETLPIHR APAFTDLET+PAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT                      +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV
Sbjct:   19 VIDAVFSSGVLPKIYNALEVEGKDGPIICEVQQLLGDNRVRAISMSATDGLQRGVKVYDTKAPISVPVGKTTLGRIFNVLGQPIDNLGDTPSNETLPIHRSAPAFTDLETRPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV 424
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: A0A1Y3BU36_HELAN (H(+)-transporting two-sector ATPase n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A1Y3BU36_HELAN)

HSP 1 Score: 640 bits (1651), Expect = 1.370e-225
Identity = 345/512 (67.38%), Postives = 404/512 (78.91%), Query Frame = 1 
Query:    1 VIDAVFSSGILPKIYNALEVQSKEGPIICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPVVDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAE-------VKFS-MGLNIRVIAPDGLIWDTTADGVVLPSLTGQLGILTGHAPLITSLEIGILRIKENSKWTPIIVLGGFAVIQNDEVLVLISGVEEVIKEDYDKAKEILVKAKKNLDSAKTTKEIIDASQELKIASAKVKAFKFI 1512
            V+D  F  G +P IYNAL              QLLG+NRVRA+AMSATDGL RG+ VID  +P+SVPVV+ L+D     T PIHR APAF  L+TK +IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+N+QDVLLF+DNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG+LQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVGDEHY+TAQ VK+TLQRYKELQDIIAILG+DELSEEDRL V RARK+       F   E        +F  M LN+ V+ P+ ++WD+    ++L + +GQ+G+L  HAP+ T+++IGILRI+ N +W  + ++GGFA I N+E+ VL++  E+    D  +A++ L  A+  L  A+  ++ I+A+  L+ A  +V+A   I
Sbjct:   29 VLDVAFPPGKMPNIYNALV-------------QLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVVERLSDEFSTTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKLSVSYHNLFSYGEGYELRNGEQFEEMTLNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEAALRKAEGKRQTIEANLALRRARTRVEAINAI 527
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: ATPB_DICDH (ATP synthase subunit beta, chloroplastic n=3 Tax=Phaeophyceae TaxID=2870 RepID=ATPB_DICDH)

HSP 1 Score: 631 bits (1628), Expect = 7.920e-223
Identity = 342/407 (84.03%), Postives = 353/407 (86.73%), Query Frame = 1 
Query:    1 VIDAVFSSGILPKIYNALEVQSKEGP-IICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPV---------------VDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT----------------------QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV 1107
            VIDAVFS+G LPKIYNALEV+SK+G  IICEVQQL  DNRVRAIAMSATDGLQRGV VID  +PI VPV               VDN+    GE+ LPIHRPAP+FTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT                      +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDIN+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP+IVG EHY TAQLVK+TLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV
Sbjct:   23 VIDAVFSAGQLPKIYNALEVKSKDGTTIICEVQQLFNDNRVRAIAMSATDGLQRGVEVIDTQAPILVPVGKATLGRIFNVLGQTVDNIEIGTGEDRLPIHRPAPSFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINRQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPVIVGSEHYDTAQLVKKTLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV 429
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: A0A371II26_MUCPR (NADH-ubiquinone oxidoreductase chain 3 (Fragment) n=67 Tax=fabids TaxID=91835 RepID=A0A371II26_MUCPR)

HSP 1 Score: 645 bits (1663), Expect = 3.270e-221
Identity = 360/588 (61.22%), Postives = 424/588 (72.11%), Query Frame = 1 
Query:    1 VIDAVFSSGILPKIYNALEVQSKEGP-----IICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPV---------------VDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT----------------------QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV------KF----------------------------------------SMGLNIRVIAPDGLIWDTTADGVVLPSLTGQLGILTGHAPLITSLEIGILRIKENSKWTPIIVLGGFAVIQNDEVLVLISGVEEVIKEDYDKAKEILVKAKKNLDSAKTTKEIIDASQELKIASAKVKA 1500
            V+D  F  G +P IYNAL V+ ++       + CEVQQLLG+NRVRA+AMSATDGL RG+ VID  +P+SVPV               +DNL       T PIHR APAF  L+TK +IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT                      +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+N+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG+LQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHY+TAQ VK+TLQRYKELQDIIAILG+DELSEEDRL V RARKIERFLSQPFFVAEV      K+                                         M LN+ V+ P+ ++WD+    ++LP+ +GQ+G+L  HAP+ ++++IGILRI+   +W  + ++GGFA I N+E+ VL++  E+    D  +A++ L  A+ NL+ A+  ++ I+A+  L+ A  +V+A
Sbjct:   30 VLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDDLPEQAFYLVGYKLRNGEQIEEMTLNLCVLTPNRIVWDSEVKEIILPTNSGQIGVLPNHAPIASAVDIGILRIRLKDQWLTMALMGGFARINNNEITVLVNDAEKGSDIDLQEAQQTLEIAEDNLNKAEGKRQTIEANLALRRARTRVEA 617
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: A0A835CYH8_9MAGN (Multifunctional fusion protein n=12 Tax=Mesangiospermae TaxID=1437183 RepID=A0A835CYH8_9MAGN)

HSP 1 Score: 631 bits (1628), Expect = 4.210e-221
Identity = 359/563 (63.77%), Postives = 416/563 (73.89%), Query Frame = 1 
Query:    1 VIDAVFSSGILPKIYNALEVQSKEGP-----IICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPV---------------VDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT----------------------QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV-KFSMGLNI---RVIAPDGLIWDTTADG-------------VVLPSLTGQLGILTGHAPLITSLEIGILRIKENSKWTPIIVLGGFAVIQNDEVLVLISGVEEVIKEDYDKAKEILVKAKKNLDSAKTTKEIIDASQELKIASAKVKAFKFI 1512
            V+D  F  G +P IYNAL V+ ++       + CEVQQLLG+NRVRA+AMSATDGL RG+ VID  +P+SVPV               VDNL       T PIHR APAF  L+TK +IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT                      +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+N+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG+LQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHY+ AQ VK+TLQRYKELQDIIAILG+DELSEEDRL V RARKIERFLSQPFFVAEV   S G  +     I    LI     DG             ++L + +GQ+G+L  HAP+ T+++IGILRI+ N +W  + ++GGFA I N+E+++L++  E+    D  +A+  L  A+ +L  A+  ++ I+A+  L+ A  +V+A   I
Sbjct:   30 VLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGLEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEIIILVNDAEKGSDIDPQEAQRTLEIAEASLRRAEGKRQTIEANLALRRARTRVEAIDVI 592
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: A0A7S6U9Y1_9STRA (ATP synthase subunit beta, chloroplastic n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6U9Y1_9STRA)

HSP 1 Score: 623 bits (1606), Expect = 1.460e-219
Identity = 333/406 (82.02%), Postives = 348/406 (85.71%), Query Frame = 1 
Query:    1 VIDAVFSSGILPKIYNALEVQSKEGPIICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPV---------------VDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT----------------------QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV 1107
            V+D  F SGILPKIYNAL++++    IICEVQQLLGDN+VRA++MSATDGLQR V V+D  +PI+VPV               VDNL D    ETLPIHRPAP FTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT                      +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMG LQERITST QGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHYKTAQ+VKETLQRYKELQDIIAILGIDELSE+DRLVV RARKIERFLSQPFFVAEV
Sbjct:   19 VVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIREDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGVLQERITSTTQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYKTAQVVKETLQRYKELQDIIAILGIDELSEDDRLVVARARKIERFLSQPFFVAEV 424
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: A0A5C7GQB8_9ROSI (Multifunctional fusion protein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A5C7GQB8_9ROSI)

HSP 1 Score: 627 bits (1616), Expect = 6.880e-217
Identity = 353/554 (63.72%), Postives = 414/554 (74.73%), Query Frame = 1 
Query:   31 LPKIYNALEVQSKEGP-----IICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPV---------------VDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT----------------------QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV------KFSMGL-----NIRVIA-------PDGLIWDTTADGVVLPSLTGQLGILTGHAPLITSLEIGILRIKENSKWTPIIVLGGFAVIQNDEVLVLISGVEEVIKEDYDKAKEILVKAKKNLDSAKTTKEIIDASQELKIASAKVKAFKFI 1512
            +P IYNAL V+ ++       + CEVQQLLG+NRVRA+AMSATDGL RG+ VID  +P+SVPV               VDNL       T PIH+ APAF  L+TK +IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT                      +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+N+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG+LQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHY+TAQ VK+TLQRYKELQDIIAILG+DELSEEDRL V RARKIERFLSQPFFVAEV      K+ +GL       ++I        P+   +      ++L + +GQ+G+L  HAP+ T+++IGILRI+ N +W  + ++GGFA I N+E+ VL++  E+    D  +A++ L  A+  L  A++ ++ I+A+  L+ A  +V+    I
Sbjct:    1 MPNIYNALIVKGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGIEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKY-VGLAETIRGFKLILSGELDRLPEQAFYLVEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRFNDQWLTMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEAGLRKAESKRQTIEANLALRRARTRVEVLNVI 553
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: A0A4S4DD71_CAMSI (NADH-ubiquinone oxidoreductase chain 3 n=2 Tax=Magnoliopsida TaxID=3398 RepID=A0A4S4DD71_CAMSI)

HSP 1 Score: 623 bits (1606), Expect = 1.120e-216
Identity = 352/536 (65.67%), Postives = 400/536 (74.63%), Query Frame = 1 
Query:    1 VIDAVFSSGILPKIYNALEVQSKEGP-----IICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPV---------------VDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT----------------------QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV-KFSMGLNI---RVIAPDGLIWDTTADG-------------VVLPSLTGQLGILTGHAPLITSLEIGILRIKENSKWTPIIVLGGFAVIQNDEVLVLISGVEEVIKEDYDKAKEILVKAKKNLDS 1431
            V+D VF  G +P IYNAL V+ ++       + CEVQQLLG+NRVRA+AMSATDGL RG+ VID  +P+SVPV               VDNL       T PIHR APAF  L+TK +IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT                      +SKVALVYGQMNEPPGARMRVGLTAL+MAEYFRD+N+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG+LQERITST +GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHY+TAQ VK+TLQRYKELQDIIAILG+DELSEEDRL V RARKIERFLSQPFFVAEV   S G  +     I    LI     DG             +VL + +GQ+G+L  HA + T+++IG+LRI+ N +W  + ++GGFA I N+E+ +L +  E     D  +A++ L  A+ NL +
Sbjct:   30 VLDVVFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALSMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVEVKEIVLSTNSGQIGVLPNHASIATAVDIGLLRIRHNDQWLTVALMGGFARISNNEITILGNDAEMSTDIDPQEAQQALEIAEANLSA 565
[Close]
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Match: A0A5N6L849_9ROSI (H(+)-transporting two-sector ATPase n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A5N6L849_9ROSI)

HSP 1 Score: 615 bits (1587), Expect = 5.670e-215
Identity = 350/531 (65.91%), Postives = 396/531 (74.58%), Query Frame = 1 
Query:   79 IICEVQQLLGDNRVRAIAMSATDGLQRGVPVIDLDSPISVPV---------------VDNLADSVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT----------------------QSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVVDRARKIERFLSQPFFVAEV-KFSMGLNI---RVIAPDGLIWDTTADG------------VVLPSLTGQLGILTGHAPLITSLEIGILRIKENSKWTPIIVLGGFAVIQNDEVLVLISGVEEVIKEDYDKAKEILVKAKKNLDSAKTTKEIIDASQELKIASAKVKAFKFI 1512
            + CEVQQLLG NRVRA+AMSATDGL RG+ VID  + +SVPV               VDNL       T PIHR APAF  L+TK +IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT                      +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRD+N+QDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTL TEMG LQERITST  GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQP IVG+EHY+TAQ VK+TLQRYKELQDIIAILG+DELSEEDRL V RARKIERFLSQPFFVAEV   S G  +     I    LI     DG            ++L + +GQ+GIL  HAP+ T+++IGILRI  N +W  + ++GGFA I N+E+ +L++  E+    D  +A++ L  A+ NL  A+  ++ I+A+  L+ A  +V+A   I
Sbjct:   57 VTCEVQQLLGKNRVRAVAMSATDGLTRGMEVIDTGASLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKSGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVVKEIILSTNSGQIGILPNHAPIATAVDIGILRICLNDQWITMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQQTLEIAEANLSKAEGKRQTIEANLALRRARTRVEAITMI 587
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M2VYX9_GALSU7.820e-24067.22H(+)-transporting two-sector ATPase n=2 Tax=Galdie... [more]
ATPB_FUCVE3.540e-23286.21ATP synthase subunit beta, chloroplastic n=207 Tax... [more]
A0A1Y3BU36_HELAN1.370e-22567.38H(+)-transporting two-sector ATPase n=1 Tax=Helian... [more]
ATPB_DICDH7.920e-22384.03ATP synthase subunit beta, chloroplastic n=3 Tax=P... [more]
A0A371II26_MUCPR3.270e-22161.22NADH-ubiquinone oxidoreductase chain 3 (Fragment) ... [more]
A0A835CYH8_9MAGN4.210e-22163.77Multifunctional fusion protein n=12 Tax=Mesangiosp... [more]
A0A7S6U9Y1_9STRA1.460e-21982.02ATP synthase subunit beta, chloroplastic n=2 Tax=S... [more]
A0A5C7GQB8_9ROSI6.880e-21763.72Multifunctional fusion protein n=2 Tax=Mesangiospe... [more]
A0A4S4DD71_CAMSI1.120e-21665.67NADH-ubiquinone oxidoreductase chain 3 n=2 Tax=Mag... [more]
A0A5N6L849_9ROSI5.670e-21565.91H(+)-transporting two-sector ATPase n=3 Tax=Pentap... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10contigL-elsbetiae_contig10:63422..65211 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score681.8
Seed ortholog evalue2.5e-193
Seed eggNOG ortholog130081.XP_005705031.1
Preferred nameATP5D
KEGG koko:K02112,ko:K02114,ko:K02133,ko:K02134,ko:K14573
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko00195,ko01100,ko03008,ko04714,ko05010,ko05012,ko05016,map00190,map00195,map01100,map03008,map04714,map05010,map05012,map05016
KEGG ModuleM00157,M00158
Hectar predicted targeting categoryother localisation
GOsGO:0000275,GO:0002376,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005754,GO:0005756,GO:0005759,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008150,GO:0008152,GO:0008270,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009544,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009814,GO:0009817,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010287,GO:0010319,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016043,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031976,GO:0031977,GO:0031984,GO:0032991,GO:0033178,GO:0034220,GO:0034357,GO:0034641,GO:0034654,GO:0042221,GO:0042407,GO:0042623,GO:0042625,GO:0042626,GO:0042651,GO:0042776,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0044877,GO:0045087,GO:0045259,GO:0045261,GO:0045267,GO:0045269,GO:0046034,GO:0046390,GO:0046483,GO:0046688,GO:0046689,GO:0046872,GO:0046907,GO:0046914,GO:0046933,GO:0050832,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0055035,GO:0055085,GO:0055086,GO:0061024,GO:0070013,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098542,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098807,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542
EggNOG free text desc.proton-transporting ATP synthase activity, rotational mechanism
EggNOG OGsCOG0055@1,COG0355@1,KOG1350@2759,KOG1758@2759
EC3.6.3.14
COG Functional cat.C
BiGG ReactioniMM904.YDL004W,iND750.YDL004W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko01000,ko03009
Exons4
Model size1515
Cds size1515
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10.36.1prot_L-elsbetiae_contig10.36.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10 63422..65211 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815232.9267337-CDS-L-elsbetiae_contig10:63421..638301622815232.9267337-CDS-L-elsbetiae_contig10:63421..63830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 63422..63830 -
1691682784.374565-CDS-L-elsbetiae_contig10:63421..638301691682784.374565-CDS-L-elsbetiae_contig10:63421..63830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 63422..63830 -
1622815232.939006-CDS-L-elsbetiae_contig10:63994..646281622815232.939006-CDS-L-elsbetiae_contig10:63994..64628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 63995..64628 -
1691682784.3849924-CDS-L-elsbetiae_contig10:63994..646281691682784.3849924-CDS-L-elsbetiae_contig10:63994..64628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 63995..64628 -
1622815232.9483597-CDS-L-elsbetiae_contig10:64694..649611622815232.9483597-CDS-L-elsbetiae_contig10:64694..64961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 64695..64961 -
1691682784.3931165-CDS-L-elsbetiae_contig10:64694..649611691682784.3931165-CDS-L-elsbetiae_contig10:64694..64961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 64695..64961 -
1622815232.961757-CDS-L-elsbetiae_contig10:65006..652111622815232.961757-CDS-L-elsbetiae_contig10:65006..65211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 65007..65211 -
1691682784.4086397-CDS-L-elsbetiae_contig10:65006..652111691682784.4086397-CDS-L-elsbetiae_contig10:65006..65211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 65007..65211 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10.36.1

>prot_L-elsbetiae_contig10.36.1 ID=prot_L-elsbetiae_contig10.36.1|Name=mRNA_L-elsbetiae_contig10.36.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=505bp
VIDAVFSSGILPKIYNALEVQSKEGPIICEVQQLLGDNRVRAIAMSATDG
LQRGVPVIDLDSPISVPVVDNLADSVGEETLPIHRPAPAFTDLETKPAIF
ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVF
GGVGERTQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLF
IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTEMGALQERITSTNQGSI
TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDST
STMLQPLIVGDEHYKTAQLVKETLQRYKELQDIIAILGIDELSEEDRLVV
DRARKIERFLSQPFFVAEVKFSMGLNIRVIAPDGLIWDTTADGVVLPSLT
GQLGILTGHAPLITSLEIGILRIKENSKWTPIIVLGGFAVIQNDEVLVLI
SGVEEVIKEDYDKAKEILVKAKKNLDSAKTTKEIIDASQELKIASAKVKA
FKFI*
back to top

mRNA from alignment at L-elsbetiae_contig10:63422..65211-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10.36.1 ID=mRNA_L-elsbetiae_contig10.36.1|Name=mRNA_L-elsbetiae_contig10.36.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1790bp|location=Sequence derived from alignment at L-elsbetiae_contig10:63422..65211- (Laminarionema elsbetiae ELsaHSoW15)
GTTATCGATGCAGTCTTTTCTTCAGGTATTTTACCAAAAATTTATAACGC
ACTTGAGGTACAAAGTAAAGAGGGTCCAATTATTTGTGAAGTACAACAAT
TATTAGGAGATAATCGAGTTCGTGCTATTGCAATGAGTGCTACTGATGGT
TTACAAAGAGGAGTACCCGTTATTGATCTAGATTCTCCAATTTCAGTCCC
TGTTGGTAAAGCAACATTAGGTCGTATCTTTAATGTTTTAGGTCAACCAG
TAGATAATTTAGCTGACAGCGTAGGAGAAGAAACATTACCTATTCATAGA
CCTGCCCCAGCATTTACGGATCTTGAAACTAAACCTGCTATTTTTGAAAC
TGGTATTAAAGTAGTAGACTTATTAGCACCCTACCGTAGAGGTGGCAAAA
TTGGTCTATTTGGCGGTGCGGGAGTAGGTAAAACCGTATTAATTATGGAA
CTAATTAATAATATTGCTAAAGCACATGGTGGTGTTTCAGTTTTTGGTGG
AGTAGGTGAACGAACACGTGAAGGGAATGATTTATATATGGAAATGAAAG
AATCAGGTGTAATTAACGAAAAAAGCTTATTAGAATCTAAAGTAGCTTTA
GTTTATGGTCAAATGAATGAGCCACCTGGTGCACGTATGCGTGTTGGACT
AACTGCCTTAACAATGGCTGAATATTTCCGTGATATTAATAAACAAGATG
TTTTATTATTTATTGATAACATTTTTAGATTTGTACAAGCTGGATCAGAG
GTTTCAGCATTATTAGGGCGTATGCCTTCAGCTGTAGGATATCAACCGAC
ACTAGGTACTGAGATGGGTGCTTTACAAGAGCGTATAACTTCAACTAATC
AAGGCTCAATTACTTCTATTCAAGCCGTTTATGTACCTGCGGATGATTTA
ACTGATCCTGCCCCAGCAACTACTTTTGCTCACTTAGATGCAACAACTGT
ATTATCAAGAGGTCTAGCAGCTAAAGGAATATACCCAGCAGTGGACCCTT
TAGATTCAACTTCAACGATGTTACAACCTTTAATTGTTGGTGATGAGCAT
TATAAAACAGCTCAGCTAGTTAAGGAAACATTACAACGTTACAAAGAATT
ACAAGATATTATTGCGATTTTAGGAATTGATGAGTTATCAGAGGAAGATC
GTTTAGTTGTAGATCGTGCTCGAAAAATCGAGCGATTCTTATCTCAACCA
TTCTTTGTTGCAGAAGTGTTTACTGGTTCACCTGGGAAATATGTAGACTT
AGAAAACACGATTAAAGGTTTTAATATGATTTTAGGTGGAGAATTAGATG
ATTTACCTGAACAAGCTTTTTATCTAGTTGGTGATATTAATGAAGCAATC
TCTAAAGCAAAAACTTTTAAAAATTAATTAGGAAATTTTCAATGGGTTTA
AATATTCGTGTTATTGCACCTGATGGGCTAATATGGGATACTACTGCTGA
TGGCGTGGTTCTACCTAGTCTTACAGGTCAATTAGGTATACTTACAGGTC
ATGCACCTTTAATTACTTCGTTAGAGATTGGAATTCTTCGAATAAAAGAG
AATTCTAAATGGACACCAATTATTGTATTAGGAGGCTTCGCTGTAATCCA
AAATGATGAAGTTTTAGTTTTAATTAGTGGTGTCGAAGAAGTAATAAAGG
AAGATTATGATAAAGCAAAAGAAATCTTGGTAAAAGCAAAAAAGAATTTA
GATTCTGCTAAAACGACAAAAGAAATAATTGATGCTTCACAAGAGCTAAA
AATAGCATCAGCTAAAGTTAAAGCTTTTAAATTTATATAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig10:63422..65211-

>mRNA_L-elsbetiae_contig10.36.1 ID=mRNA_L-elsbetiae_contig10.36.1|Name=mRNA_L-elsbetiae_contig10.36.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3030bp|location=Sequence derived from alignment at L-elsbetiae_contig10:63422..65211- (Laminarionema elsbetiae ELsaHSoW15)
GTTATCGATGCAGTCTTTTCTTCAGGTATTTTACCAAAAATTTATAACGC
ACTTGAGGTACAAAGTAAAGAGGGTCCAATTATTTGTGAAGTACAACAAT
TATTAGGAGATAATCGAGTTCGTGCTATTGCAATGAGTGCTACTGATGGT
TTACAAAGAGGAGTACCCGTTATTGATCTAGATTCTCCAATTTCAGTCCC
TGTTGGTTATCGATGCAGTCTTTTCTTCAGGTATTTTACCAAAAATTTAT
AACGCACTTGAGGTACAAAGTAAAGAGGGTCCAATTATTTGTGAAGTACA
ACAATTATTAGGAGATAATCGAGTTCGTGCTATTGCAATGAGTGCTACTG
ATGGTTTACAAAGAGGAGTACCCGTTATTGATCTAGATTCTCCAATTTCA
GTCCCTGTTGTAGATAATTTAGCTGACAGCGTAGGAGAAGAAACATTACC
TATTCATAGACCTGCCCCAGCATTTACGGATCTTGAAACTAAACCTGCTA
TTTTTGAAACTGGTATTAAAGTAGTAGACTTATTAGCACCCTACCGTAGA
GGTGGCAAAATTGGTCTATTTGGCGGTGCGGGAGTAGGTAAAACCGTATT
AATTATGGAACTAATTAATAATATTGCTAAAGCACATGGTGGTGTTTCAG
TTTTTGGTGGAGTAGGTGAACGAACACTAGATAATTTAGCTGACAGCGTA
GGAGAAGAAACATTACCTATTCATAGACCTGCCCCAGCATTTACGGATCT
TGAAACTAAACCTGCTATTTTTGAAACTGGTATTAAAGTAGTAGACTTAT
TAGCACCCTACCGTAGAGGTGGCAAAATTGGTCTATTTGGCGGTGCGGGA
GTAGGTAAAACCGTATTAATTATGGAACTAATTAATAATATTGCTAAAGC
ACATGGTGGTGTTTCAGTTTTTGGTGGAGTAGGTGAACGAACACAATCTA
AAGTAGCTTTAGTTTATGGTCAAATGAATGAGCCACCTGGTGCACGTATG
CGTGTTGGACTAACTGCCTTAACAATGGCTGAATATTTCCGTGATATTAA
TAAACAAGATGTTTTATTATTTATTGATAACATTTTTAGATTTGTACAAG
CTGGATCAGAGGTTTCAGCATTATTAGGGCGTATGCCTTCAGCTGTAGGA
TATCAACCGACACTAGGTACTGAGATGGGTGCTTTACAAGAGCGTATAAC
TTCAACTAATCAAGGCTCAATTACTTCTATTCAAGCCGTTTATGTACCTG
CGGATGATTTAACTGATCCTGCCCCAGCAACTACTTTTGCTCACTTAGAT
GCAACAACTGTATTATCAAGAGGTCTAGCAGCTAAAGGAATATACCCAGC
AGTGGACCCTTTAGATTCAACTTCAACGATGTTACAACCTTTAATTGTTG
GTGATGAGCATTATAAAACAGCTCAGCTAGTTAAGGAAACATTACAACGT
TACAAAGAATTACAAGATATTATTGCGATTTTAGGAATTGATGAGTTATC
AGAGGAAGATCGTTTAGTTGTAGATCGTGCTCGAAAAATCGAGCGATTCT
TATCTCAACCATTCTTTGTTGCAGAAGTAATCTAAAGTAGCTTTAGTTTA
TGGTCAAATGAATGAGCCACCTGGTGCACGTATGCGTGTTGGACTAACTG
CCTTAACAATGGCTGAATATTTCCGTGATATTAATAAACAAGATGTTTTA
TTATTTATTGATAACATTTTTAGATTTGTACAAGCTGGATCAGAGGTTTC
AGCATTATTAGGGCGTATGCCTTCAGCTGTAGGATATCAACCGACACTAG
GTACTGAGATGGGTGCTTTACAAGAGCGTATAACTTCAACTAATCAAGGC
TCAATTACTTCTATTCAAGCCGTTTATGTACCTGCGGATGATTTAACTGA
TCCTGCCCCAGCAACTACTTTTGCTCACTTAGATGCAACAACTGTATTAT
CAAGAGGTCTAGCAGCTAAAGGAATATACCCAGCAGTGGACCCTTTAGAT
TCAACTTCAACGATGTTACAACCTTTAATTGTTGGTGATGAGCATTATAA
AACAGCTCAGCTAGTTAAGGAAACATTACAACGTTACAAAGAATTACAAG
ATATTATTGCGATTTTAGGAATTGATGAGTTATCAGAGGAAGATCGTTTA
GTTGTAGATCGTGCTCGAAAAATCGAGCGATTCTTATCTCAACCATTCTT
TGTTGCAGAAGTGAAATTTTCAATGGGTTTAAATATTCGTGTTATTGCAC
CTGATGGGCTAATATGGGATACTACTGCTGATGGCGTGGTTCTACCTAGT
CTTACAGGTCAATTAGGTATACTTACAGGTCATGCACCTTTAATTACTTC
GTTAGAGATTGGAATTCTTCGAATAAAAGAGAATTCTAAATGGACACCAA
TTATTGTATTAGGAGGCTTCGCTGTAATCCAAAATGATGAAGTTTTAGTT
TTAATTAGTGGTGTCGAAGAAGTAATAAAGGAAGATTATGATAAAGCAAA
AGAAATCTTGGTAAAAGCAAAAAAGAATTTAGATTCTGCTAAAACGACAA
AAGAAATAATTGATGCTTCACAAGAGCTAAAAATAGCATCAGCTAAAGTT
AAAGCTTTTAAATTTATATAGGAAATTTTCAATGGGTTTAAATATTCGTG
TTATTGCACCTGATGGGCTAATATGGGATACTACTGCTGATGGCGTGGTT
CTACCTAGTCTTACAGGTCAATTAGGTATACTTACAGGTCATGCACCTTT
AATTACTTCGTTAGAGATTGGAATTCTTCGAATAAAAGAGAATTCTAAAT
GGACACCAATTATTGTATTAGGAGGCTTCGCTGTAATCCAAAATGATGAA
GTTTTAGTTTTAATTAGTGGTGTCGAAGAAGTAATAAAGGAAGATTATGA
TAAAGCAAAAGAAATCTTGGTAAAAGCAAAAAAGAATTTAGATTCTGCTA
AAACGACAAAAGAAATAATTGATGCTTCACAAGAGCTAAAAATAGCATCA
GCTAAAGTTAAAGCTTTTAAATTTATATAG
back to top