mRNA_L-digitata_M_contig10159.3.2 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: A0A6H5JT97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT97_9PHAE) HSP 1 Score: 445 bits (1145), Expect = 2.380e-148 Identity = 295/425 (69.41%), Postives = 322/425 (75.76%), Query Frame = 1
Query: 193 IATTNKGGAGAVADTTTAVKIDLLDSFQELRKSWPKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYDKAAGSPDTGGSPP-RQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSFWSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAIHYDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVSSAGSGEPAAAHGAEIAGLKDVKCSRGGGQGGXXXXXXXXXXXXXXXXXXXXSEEGFPIGMPDLDMYAFLPADEQMSCAQAAPCVRFLLGA 1464
+ T G GA A +T+ I+LLD F++LR SWPK+MARL DP+L D+RR+ELWEIMC GGD LRQRFAW IPDERALRI++HFGP+VEIGSGLGYWA LLRARGVD NAYDK AG+PDT + P R K + + G K+ E G DE PSFW KV EGGPDVLEE CNE RSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQ+PWGRTTS +CQEELASKFHCILKVPLP WPHSRDTLTVWKRH+FC+I YDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + G K K + G G+ XXXXXXXXXXXX S EG PIGM D+DMYAF+P DE M CAQAAPC RFLL A
Sbjct: 16 VGATAAGADGAGAKSTS---IELLDKFKKLRASWPKEMARLLDPSLPDERRSELWEIMCSGGDVLRQRFAWAIPDERALRIIKHFGPIVEIGSGLGYWAKLLRARGVDINAYDKVAGTPDTASAAPDSSRTKGKSTSKDAKVKSAAEGVVKEDADEGGGDE--TPSFWIKVNEGGPDVLEEPCNEGRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKRHSFCSIQYDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDREANGKGR--------------KGGKKAEGSGKX-XXXXXXXXXXXXSSGSDDFGSIEGLPIGMLDVDMYAFVPEDETMPCAQAAPCARFLLDA 420
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: D8LFK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK6_ECTSI) HSP 1 Score: 439 bits (1130), Expect = 2.140e-135 Identity = 257/409 (62.84%), Postives = 285/409 (69.68%), Query Frame = 1
Query: 253 IDLLDSFQELRKSWPKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYDKAAGSPDTGGSPP-----RQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSFWSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAIHYDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESVSSAGSGEPAAAHGAEIAGLKDVKCSRGGGQGGXXXXXXXXXXXXXXXXXXXXSEEGFPIGMPDLDMYAFLPADEQMSCAQAAPCVRFLLGA 1464
I+LLD F++LR SWPK+MARL DP+L D+RR+ELWEIMC GGD LRQRFAW IPDERALRI++HFGP+VE+GSGLGYWA LLRARGVD N YDK AG+PDT + P + + K +K + A DG K+ E G E APSFW KV EGGPDVLEE CNE RSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQ+PWGRTTS +CQEELASKFHCILKVPLP WPHSRDTLTVWKRH+FC+I YDD X XXXXXXXXXXXX + +S+ G HG K XXXXXXXXXX S EG PIGM D+DMYAF+P DE+M CAQAAPC RFLL A
Sbjct: 34 IELLDEFKKLRASWPKEMARLLDPSLPDERRSELWEIMCSGGDVLRQRFAWAIPDERALRIIKHFGPIVEVGSGLGYWAKLLRARGVDINPYDKVAGTPDTASAAPDSSQTKGKSTSKDAKVKSAAEGDG----KEDADEGGGGE--APSFWIKVNEGGPDVLEEPCNEDRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQSPWGRTTSQECQEELASKFHCILKVPLPSWPHSRDTLTVWKRHSFCSIQYDDDDDSDXNEAXXXXXXXXXXXXAQGKEPGE----------------KGKNSSPKGVSGDGHGXXXXXRKGXXXXXXXXXXXXXXXXXXXXXRSSSGSDDFGSIEGLPIGMLDVDMYAFVPEDERMPCAQAAPCARFLLDA 420
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: A0A1V9YVH9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVH9_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.960e-58 Identity = 105/247 (42.51%), Postives = 149/247 (60.32%), Query Frame = 1
Query: 295 PKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYDKAAGSPDTGGSPPRQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSFWSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAI 1035
PK+M RLFDP+L D +R EL+EI+ D + +++W IPDERALRI++H+GP+VE+G+G GYW LL+ RGVD +D +P GE+K +++ +++E+ W +VE+G P+VL E + R+L LCYPDDFE ES+ L CL + GD +IH+GE G +V + PWGRT++ + Q LA+ FH +L+VPLP W S DTLTVWKR C +
Sbjct: 31 PKEMNRLFDPSLDDTKREELFEIL---DDSVASKYSWAIPDERALRIIKHYGPIVEMGAGSGYWGRLLQLRGVDIKCFDL--------------HVP---------------GEEKGDVSDEDDEDEQVRMTWMEVEQGTPEVLPE--YKDRTLLLCYPDDFEDSEESMALECLDNYTGDTIIHIGEWLGQTVCLPE---PWGRTSAPEFQTRLAAVFHKVLQVPLPSWHSSMDTLTVWKRTKTCIV 240
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: A0A024UED4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UED4_9STRA) HSP 1 Score: 207 bits (526), Expect = 4.060e-58 Identity = 113/268 (42.16%), Postives = 160/268 (59.70%), Query Frame = 1
Query: 235 TTTAVKIDLLDSFQELRKSWPKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYDKAAGSPDTGGSPPRQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSF-WSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAI 1035
T TA LD ++ +KS PK+MAR+FDP L D+ R EL+ + D + +++W IPDERALRI++H+GP+VEIG+G GYW LL+ RGVD +D L G +S A +D ++++ D +++P W +VE+G P+VL + N R+L LCYPDD+E ES+ CL+ + G+ VIH+GELFG ++ + PWGRT+S + Q LA+ FH IL+VPL W S DTLTVWKR C +
Sbjct: 15 TLTATCNPYLDFYRSFQKSQPKEMARIFDPDLDDETREELFNAV---DDNVAAKYSWAIPDERALRIIKHYGPIVEIGAGTGYWGRLLQLRGVDIKCFD----------------LHVPGDESANGADSDDASDEER-------DVDDSPRMTWLEVEQGTPEVLTKHKN--RTLLLCYPDDYEDSDESMAEACLNYYTGEYVIHIGELFGHTLCLPE---PWGRTSSPEFQTRLAAVFHKILQVPLHSWHSSVDTLTVWKRTKTCIV 251
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: A0A1V9YJ57_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJ57_9STRA) HSP 1 Score: 204 bits (519), Expect = 3.100e-57 Identity = 104/258 (40.31%), Postives = 153/258 (59.30%), Query Frame = 1
Query: 262 LDSFQELRKSWPKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYDKAAGSPDTGGSPPRQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSFWSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAI 1035
LD +++ PK+M R+FDP L D++R EL+ ++ D + +++W IPDERALRI++H+GP+VE+G+G GYW LL+ RGVD +D +P G E K ++ ++ EE W V++G P+VL++ + KR+L LCYPDDFE ES+ L CL+ + GD +IHVGE G +V + PWGRT++ + Q +L++ FH +L+VPLP W S DTLTVWKR C +
Sbjct: 19 LDFYRDFEAKQPKEMPRIFDPELDDEKREELFNLL---DDSVAAKYSWAIPDERALRIIKHYGPIVEMGAGSGYWGRLLQLRGVDVKCFDL--------------HVP--------------GTESAKDESDDEDEAEEERMTWMDVQQGTPEVLKK--HSKRTLLLCYPDDFEDSEESMALECLNNYTGDTIIHVGEWLGQTVCLPE---PWGRTSAPEFQTQLSAVFHKVLQVPLPSWHSSIDTLTVWKRTKTCIV 240
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: W4G0Y3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0Y3_9STRA) HSP 1 Score: 203 bits (517), Expect = 8.130e-57 Identity = 114/265 (43.02%), Postives = 152/265 (57.36%), Query Frame = 1
Query: 241 TAVKIDLLDSFQELRKSWPKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYDKAAGSPDTGGSPPRQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSFWSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAI 1035
TA LD ++ +KS PKDMARLFDP L DD R EL+ ++ D++ +++W IPDERALRI++H+GP+VEIG+G GYW LL+ RGVD +D L G + DG GE E W VE+G P+VL +KR+L LCYPDD+E ES+ CL+ + G+ VIH+GELFG ++ + PWGRT+S + Q LA+ FH +L+VPL W S DTLTVWKR C +
Sbjct: 18 TATCNPYLDFYRTFQKSQPKDMARLFDPDLDDDTREELFNLV---DDKVAAKYSWAIPDERALRIIKHYGPIVEIGAGTGYWGRLLQLRGVDVKCFD----------------LHVPGEEG------DGAGEXXXXXXEP------ERMTWLDVEQGTPEVLSR--FKKRTLLLCYPDDYEDSEESMAEACLNNYTGEYVIHIGELFGHTLCLPE---PWGRTSSPEFQTRLAAVFHKVLQVPLNSWHSSVDTLTVWKRTKTCIV 246
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: A0A6A5AE36_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AE36_9STRA) HSP 1 Score: 201 bits (510), Expect = 5.190e-56 Identity = 112/266 (42.11%), Postives = 151/266 (56.77%), Query Frame = 1
Query: 241 TAVKIDLLDSFQELRKSWPKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYDKAAGSPDTGGSPPRQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSF-WSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAI 1035
TA LD ++ +KS PKDMARLFDP L DD R EL+ ++ D++ +++W IPDERALRI++H+GP+VEIG+G GYW LL+ RGVD +D +P GE+ E E W VE+G P+VL +KR+L LCYPDD+E ES+ CL+ + G+ VIH+GELFG ++ + PWGRT+S + Q LA+ FH +L+VPL W S DTLTVWKR C +
Sbjct: 18 TATCNPYLDFYRTFQKSQPKDMARLFDPDLDDDTREELFNLV---DDKVAAKYSWAIPDERALRIIKHYGPIVEIGAGTGYWGRLLQLRGVDVKCFDL--------------HVP---------------GEEGDDAGEXXXXXXEPERMTWLDVEQGTPEVLSR--FKKRTLLLCYPDDYEDSEESMAEACLNNYTGEYVIHIGELFGHTLCLPE---PWGRTSSPEFQTRLAAVFHKVLQVPLNSWHSSVDTLTVWKRTKTCIV 246
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: A0A485KIU8_9STRA (Aste57867_7875 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIU8_9STRA) HSP 1 Score: 199 bits (507), Expect = 2.190e-55 Identity = 106/263 (40.30%), Postives = 146/263 (55.51%), Query Frame = 1
Query: 262 LDSFQELRKSWPKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYD-----KAAGSPDTGGSPPRQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSFWSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAI 1035
L+ F+ +KS PKDM RLFDP L D+ R L+ ++ D + +++W IPDERALR+++H+GP+VEIG+G GYW LL+ RGVD +D D ++L +K W V++G P+VL++ KRSL LCYPDD+E ES+ L CL+ + GD VIH+GELFG ++ + PWGRT+S D Q LA+ FH +L+VPL W S D LTVWKR C +
Sbjct: 27 LEFFRSFQKSQPKDMDRLFDPDLDDEVRENLFNLV---DDNIASKYSWAIPDERALRVIKHYGPIVEIGAGTGYWGRLLQLRGVDIKCFDLHVPGDGVSDDDASXXXXXEKLERK--------------------------------TWIHVQKGTPEVLKK--LNKRSLLLCYPDDYEDSEESMALECLNNYTGDTVIHIGELFGHTLCLPE---PWGRTSSPDFQIRLAAVFHKVLQVPLNSWHSSMDALTVWKRTKTCIV 249
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: A0A067CHL3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHL3_SAPPC) HSP 1 Score: 197 bits (502), Expect = 1.050e-54 Identity = 108/267 (40.45%), Postives = 150/267 (56.18%), Query Frame = 1
Query: 235 TTTAVKIDLLDSFQELRKSWPKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYDKAAGSPDTGGSPPRQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSFWSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAI 1035
T TA LD +++ PK+MARLFDP L D+ R EL+ ++ D + +++W IPDERALRI++H+GPVVE+G+G GYW LL+ RGVD +D +P GT + K+ E W V++G P VL++ + KR+L LCYPDDFE ES+ CL+ F GD +IH+GE G +V + PWGRT++ + Q L++ FH +L+VPLP W S DTLTVWKR C +
Sbjct: 10 TLTATSNPYLDFYRDFEAKQPKEMARLFDPELDDETREELFNLL---DDNVAAKYSWAIPDERALRIIKHYGPVVEMGAGSGYWGRLLQLRGVDVKCFDL--------------HVP------GTASA------KQDSXXXXXXXXAEERMTWLDVQQGTPKVLKK--HSKRTLLLCYPDDFEDSEESMANECLNHFTGDTIIHIGEWLGQTVCLPE---PWGRTSAPEFQTRLSAVFHKVLQVPLPSWHSSIDTLTVWKRTKTCIM 242
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Match: A0A6G0WNX8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNX8_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.910e-54 Identity = 105/258 (40.70%), Postives = 147/258 (56.98%), Query Frame = 1
Query: 262 LDSFQELRKSWPKDMARLFDPALSDDRRAELWEIMCEGGDRLRQRFAWGIPDERALRIVEHFGPVVEIGSGLGYWAMLLRARGVDFNAYDKAAGSPDTGGSPPRQRLPQKGSKSGTPAGTDGGGEKKKKLAEAGEDEEEAPSFWSKVEEGGPDVLEEECNEKRSLFLCYPDDFEGETESLGLRCLHAFEGDVVIHVGELFGDSVSMTPGQTPWGRTTSSDCQEELASKFHCILKVPLPRWPHSRDTLTVWKRHAFCAI 1035
L+ F +K PK+M RLFDP L D+ R L+ + D + +++W +PDERALRI++H+GP+VE+G+G GYW LL+ RGVD +D +P GE+K W VE+G P+VL++ ++KR+L LCYPDD+E ES+ L CL+ + GD VIH+GELFG ++ + PWGRT+S + Q LA+ FH +L+VPLP W S DTLTVWKR C +
Sbjct: 29 LEYFTSFQKKQPKEMDRLFDPDLDDETRETLFNSV---DDSIASKYSWAVPDERALRIIKHYGPIVEMGAGTGYWGRLLQLRGVDIKCFDL--------------HVP---------------GEEKXXXXXXXXX---XXRTWMTVEKGTPEVLKK--HKKRTLMLCYPDDYEDSEESMSLECLNNYSGDTVIHIGELFGHTLCLPE---PWGRTSSPEFQMRLAAVFHKVLQVPLPSWHSSMDTLTVWKRTKTCIV 246 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10159.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig10159.3.2 >prot_L-digitata_M_contig10159.3.2 ID=prot_L-digitata_M_contig10159.3.2|Name=mRNA_L-digitata_M_contig10159.3.2|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=461bp MPSSRNAKRRRKQTAGSTTSDDAGPGTDGIATTNKGGAGAVADTTTAVKIback to top mRNA from alignment at L-digitata_M_contig10159:1738..7641- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig10159.3.2 ID=mRNA_L-digitata_M_contig10159.3.2|Name=mRNA_L-digitata_M_contig10159.3.2|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=5904bp|location=Sequence derived from alignment at L-digitata_M_contig10159:1738..7641- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig10159:1738..7641- >mRNA_L-digitata_M_contig10159.3.2 ID=mRNA_L-digitata_M_contig10159.3.2|Name=mRNA_L-digitata_M_contig10159.3.2|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1383bp|location=Sequence derived from alignment at L-digitata_M_contig10159:1738..7641- (Laminaria digitata LdigPH10_18mv male)back to top |