prot_L-digitata_M_contig99656.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: A0A6H5L9Y2_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Y2_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.000e-32 Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0
Query: 1 QVPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
QVPVNIKRLVWNAQKMFQIKP GESDMSPTYVIRR RE+CEGLSVVTGEDSLS+EAQ NATMLFKILV
Sbjct: 1014 QVPVNIKRLVWNAQKMFQIKPYGESDMSPTYVIRRVRELCEGLSVVTGEDSLSVEAQSNATMLFKILV 1081
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: D8LRY3_ECTSI (DNA-directed RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY3_ECTSI) HSP 1 Score: 123 bits (309), Expect = 3.060e-31 Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 0
Query: 1 QVPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
QVPVNIKRLVWN+QKMFQIK GESDMSPTYVIRR RE+CEGLSVVTGEDSLS+EAQ NATMLFKILV
Sbjct: 1013 QVPVNIKRLVWNSQKMFQIKSYGESDMSPTYVIRRVRELCEGLSVVTGEDSLSVEAQSNATMLFKILV 1080
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: Q1ACV3_ACEPM (DNA-directed RNA polymerase (Fragment) n=1 Tax=Acer palmatum TaxID=66201 RepID=Q1ACV3_ACEPM) HSP 1 Score: 76.6 bits (187), Expect = 2.090e-15 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 2 VPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
+PVN+KRL+WNAQK F++ P SDM P V+ ++ E L VV G+D+LS+EAQ+NAT+ F IL+
Sbjct: 127 MPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAIDKLQERLKVVPGDDALSVEAQKNATLFFNILL 193
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: A0A6P9E4T1_JUGRE (DNA-directed RNA polymerase subunit n=133 Tax=Magnoliopsida TaxID=3398 RepID=A0A6P9E4T1_JUGRE) HSP 1 Score: 78.2 bits (191), Expect = 2.760e-15 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 2 VPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
+PVN+KRL+WNAQK+F+I P SDM P ++ ++ E L VV GED LS+EAQ+NAT+ F IL+
Sbjct: 975 LPVNLKRLIWNAQKIFKIDPRRHSDMHPMEIVEAVDKLQERLKVVPGEDLLSVEAQKNATLFFSILL 1041
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: A0A426XDW5_ENSVE (DNA-directed RNA polymerase (Fragment) n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426XDW5_ENSVE) HSP 1 Score: 77.8 bits (190), Expect = 3.740e-15 Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 1 QVPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
Q+PVN+KRL+WNAQK F+I P SDM P ++ ++ E L VV G+D LS EAQRNAT+LF IL+
Sbjct: 211 QMPVNLKRLIWNAQKTFKIDPRRPSDMHPMEIVDAVDKLQERLKVVAGDDFLSTEAQRNATLLFGILL 278
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: V4SDF7_CITCL (DNA-directed RNA polymerase subunit n=7 Tax=Sapindales TaxID=41937 RepID=V4SDF7_CITCL) HSP 1 Score: 77.4 bits (189), Expect = 5.160e-15 Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 0
Query: 2 VPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
+PVN+KRL+WNAQK F++ P SDM P V+ ++ E L VV GED LS+EAQ+NAT+ F IL+
Sbjct: 975 LPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVPGEDPLSVEAQKNATLFFNILL 1041
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: A1YIC1_BLAEM (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Blastocladiella emersonii TaxID=4808 RepID=A1YIC1_BLAEM) HSP 1 Score: 77.0 bits (188), Expect = 6.990e-15 Identity = 31/67 (46.27%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 2 VPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
+P N+ R++WNAQ +F+I S++ P YV+++ R +C+GL V+ G D +S+EAQRNAT+L + LV
Sbjct: 884 LPCNLNRIIWNAQNLFKIDKSKPSNLHPDYVVKKVRALCDGLVVIPGTDKISVEAQRNATLLMQALV 950
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: A1YIC2_9FUNG (DNA-directed RNA polymerase subunit (Fragment) n=2 Tax=Coelomomyces stegomyiae TaxID=143960 RepID=A1YIC2_9FUNG) HSP 1 Score: 76.6 bits (187), Expect = 9.550e-15 Identity = 30/67 (44.78%), Postives = 52/67 (77.61%), Query Frame = 0
Query: 2 VPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
+P+N+KR++WNAQ +F+I S++ P YV+ + R +C+ L+V+ G+D +S+EAQ+NAT+L +IL+
Sbjct: 893 LPMNLKRIIWNAQNLFKIDKQRPSNLHPDYVVNQVRGLCDKLTVIRGDDKISLEAQKNATLLTQILI 959
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: A0A1V9Z1K8_9STRA (DNA-directed RNA polymerase subunit n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z1K8_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 9.630e-15 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 0
Query: 1 QVPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
QVPVNIKRLV NAQ++F I S + P ++I R++C + VV G+D+LSIEAQ NAT+LF+ILV
Sbjct: 1027 QVPVNIKRLVQNAQQLFSISTLHPSTLHPRHIIEGVRDLCREIIVVKGDDNLSIEAQENATLLFQILV 1094
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Match: A0A804I6Z0_MUSAM (DNA-directed RNA polymerase subunit n=2 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804I6Z0_MUSAM) HSP 1 Score: 76.3 bits (186), Expect = 1.310e-14 Identity = 37/67 (55.22%), Postives = 49/67 (73.13%), Query Frame = 0
Query: 2 VPVNIKRLVWNAQKMFQIKPDGESDMSPTYVIRRTREVCEGLSVVTGEDSLSIEAQRNATMLFKILV 68
+PVN+KRL+WNAQK F+I P SDM P ++ ++ E L VV G+D LS+EAQRNAT+LF IL+
Sbjct: 976 MPVNLKRLIWNAQKTFKIDPRRPSDMHPMEIVDAVDKLQERLKVVPGDDFLSMEAQRNATLLFGILL 1042 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99656.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-digitata_M_contig99656.1.1 ID=prot_L-digitata_M_contig99656.1.1|Name=mRNA_L-digitata_M_contig99656.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=68bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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