prot_L-digitata_M_contig99131.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig99131.1.1
Unique Nameprot_L-digitata_M_contig99131.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length278
Homology
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: A0A520NR13_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NR13_9PROT)

HSP 1 Score: 498 bits (1283), Expect = 4.130e-172
Identity = 255/274 (93.07%), Postives = 264/274 (96.35%), Query Frame = 0
Query:    5 ADSTDTQPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            ADS DTQPYRVLARKYRPSDF+SLIGQEAMVQTLSNAI SGRLAHAFILTGVRGVGKT+TARIIA+ALNC+G DGNGE TAEPCGVCENCV+I+EDRHVDVMEMDAASRTGV+DIRELIDGVLYRPVSARYK+YIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFA I+E EGA I RGAIGLIA AADGSVRDGLSLLDQAIAHSGPETEI EDIVRDMLGVAERVQVFDLFEQLMKGEI
Sbjct:    2 ADSPDTQPYRVLARKYRPSDFTSLIGQEAMVQTLSNAIVSGRLAHAFILTGVRGVGKTTTARIIAKALNCSGTDGNGEATAEPCGVCENCVSISEDRHVDVMEMDAASRTGVEDIRELIDGVLYRPVSARYKVYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFALISEKEGANITRGAIGLIAHAADGSVRDGLSLLDQAIAHSGPETEIGEDIVRDMLGVAERVQVFDLFEQLMKGEI 275          
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: A0A2D7FMI2_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FMI2_9PROT)

HSP 1 Score: 492 bits (1267), Expect = 2.930e-169
Identity = 258/281 (91.81%), Postives = 263/281 (93.59%), Query Frame = 0
Query:    1 MAEAADS---TDTQPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            M EA D+   T+ Q YRVLARKYRPS+F SLIGQEAMVQTLSNAI SGRLAHAFILTGVRGVGKTSTARIIARALNC G DGNG PTA+PCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLV HFARIAETE A I RGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINE IVRDMLGVAERVQVFDLFEQLMK E+
Sbjct:    1 MVEAPDTDNPTEAQSYRVLARKYRPSNFVSLIGQEAMVQTLSNAITSGRLAHAFILTGVRGVGKTSTARIIARALNCIGTDGNGGPTAQPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVAHFARIAETEDAAITRGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEHIVRDMLGVAERVQVFDLFEQLMKAEV 281          
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: A0A2D8G4L3_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G4L3_9PROT)

HSP 1 Score: 457 bits (1176), Expect = 5.210e-156
Identity = 235/274 (85.77%), Postives = 247/274 (90.15%), Query Frame = 0
Query:    5 ADSTDTQPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            A +  TQPYRVLARKYRPSDF SLIGQEAMVQTLSNAIA GRLAHAFILTGVRGVGKT+TARIIA+ALNC G DGNG  T+ PCGVCENC++I EDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYK+YIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQR DLR VKF V VDHF  ++  E A IA GA GLIARAADGSVRDGLSLLDQAIAHSGPETEI+ED VR+MLGV ERVQVFDLFE LM G+I
Sbjct:    2 AXNPSTQPYRVLARKYRPSDFDSLIGQEAMVQTLSNAIALGRLAHAFILTGVRGVGKTTTARIIAKALNCIGPDGNGGATSAPCGVCENCLSITEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKVYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRXDLRXVKFQVXVDHFTELSSKENANIAPGAXGLIARAADGSVRDGLSLLDQAIAHSGPETEISEDTVREMLGVVERVQVFDLFEYLMAGDI 275          
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: A0A2S6Q5K5_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q5K5_9PROT)

HSP 1 Score: 457 bits (1175), Expect = 7.850e-156
Identity = 233/274 (85.04%), Postives = 255/274 (93.07%), Query Frame = 0
Query:    5 ADSTDTQPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            ADS D QPYRVLARKYRP DF+SLIGQEAMVQTLSNAIAS RLAHAFILTGVRGVGKT+TARIIA+ALNCTGADG GE TAEPCGVC+ C++IAEDR+VDVMEMDAASRTGV+DIRELIDGVLYRPVSAR+KIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRR+ F +LV+HF+ I+E EGA I   A+ LIARAADGSVRDGLSLLDQA+AHSG E EI E++VR+MLGVAERV+VFDLF+QLM+GEI
Sbjct:    2 ADSPDNQPYRVLARKYRPRDFTSLIGQEAMVQTLSNAIASHRLAHAFILTGVRGVGKTTTARIIAKALNCTGADGAGEATAEPCGVCDFCLSIAEDRNVDVMEMDAASRTGVEDIRELIDGVLYRPVSARFKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRINFSMLVEHFSEISEKEGANITPSALSLIARAADGSVRDGLSLLDQAMAHSGSEAEIGEELVREMLGVAERVKVFDLFDQLMRGEI 275          
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: A0A2N3Q0L0_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Telmatospirillum siberiense TaxID=382514 RepID=A0A2N3Q0L0_9PROT)

HSP 1 Score: 419 bits (1076), Expect = 4.030e-141
Identity = 215/273 (78.75%), Postives = 239/273 (87.55%), Query Frame = 0
Query:    6 DSTDTQPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            DS+ T PYRVLARKYRP+DF+ LIGQEAMV+TLSNAI SGRLAHAF+LTGVRGVGKT+TARIIARALNC G DG G PT EPCGVCE+C AIAEDRHVDV+EMDAASRTGV+DIRELIDGV YRP SAR+KIYIIDEVHMLS  AFNALLKTLEEPPEHVKFIFATTEIR++PVTVLSRCQRFDLRRV  DVL  HFA IAE EGA I   A+ LI RAADGSVRDGLSLLDQAIAH   +  ++E+ VRDMLG+A+R +VFDLF+ +MKG++
Sbjct:    3 DSSATSPYRVLARKYRPADFAGLIGQEAMVRTLSNAIQSGRLAHAFVLTGVRGVGKTTTARIIARALNCVGVDGQGGPTTEPCGVCEHCRAIAEDRHVDVLEMDAASRTGVNDIRELIDGVRYRPTSARFKIYIIDEVHMLSTAAFNALLKTLEEPPEHVKFIFATTEIRKIPVTVLSRCQRFDLRRVDMDVLNAHFAAIAEKEGAVIDPAALALICRAADGSVRDGLSLLDQAIAHGAGQ--VSEEQVRDMLGLADRARVFDLFDSVMKGDL 273          
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: A0A6N7F7A0_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F7A0_9PROT)

HSP 1 Score: 416 bits (1069), Expect = 5.350e-140
Identity = 212/275 (77.09%), Postives = 240/275 (87.27%), Query Frame = 0
Query:    6 DSTDTQPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPET--EINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            DS   QPYRVLARKYRP+ F+ LIGQEAMV+TL+NAIA+ RL HAF+LTGVRG+GKTSTARIIARALNC G DG G PTA PCG CE+CV+IAEDRHVDV+EMDAASRTGV+DIRELIDGV YRP SARYKIYIIDEVHMLS  AFNALLKTLEEPPEHVKF+FATTEIR+VPVTVLSRCQRFDLRRV   VLV HFA IAE EGA +A GA+GLIARAADGSVRDGLSL+DQAIAH+G E   E+ E +VRDMLG+A+  +++DL++ LM+G +
Sbjct:    3 DSAQPQPYRVLARKYRPTTFAGLIGQEAMVRTLTNAIAADRLPHAFVLTGVRGIGKTSTARIIARALNCVGPDGAGGPTAAPCGQCEHCVSIAEDRHVDVLEMDAASRTGVNDIRELIDGVRYRPTSARYKIYIIDEVHMLSTAAFNALLKTLEEPPEHVKFVFATTEIRKVPVTVLSRCQRFDLRRVDAGVLVRHFASIAEQEGAKVAEGALGLIARAADGSVRDGLSLMDQAIAHAGMEDGGEVTETLVRDMLGLADGERIYDLYDALMRGAV 277          
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: A0A1E5QC64_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Magnetovibrio blakemorei TaxID=28181 RepID=A0A1E5QC64_9PROT)

HSP 1 Score: 414 bits (1064), Expect = 2.960e-139
Identity = 207/268 (77.24%), Postives = 238/268 (88.81%), Query Frame = 0
Query:   11 QPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            + YRVLARKYRP+DF +LIGQ A+V+TL+NAI SGRLAHAF+LTGVRGVGKT+TARIIARALNC GADG G  TAEPCGVC+NC AIAEDRHVDVMEMDAASRTGVDDIRE+I+GV Y+PVSARYK+YIIDEVHMLS+NAFNALLKTLEEPPEHVKFIFATTEIR+VPVTVLSRCQRFDLRR+  D L  HF  I E EGA+++ GA+ LI+RAADGSVRDGLSLLDQAIAH+  + E+ ED VRDMLG+A+R + FDL + +MKG++
Sbjct:   12 EEYRVLARKYRPTDFHTLIGQNALVRTLTNAIQSGRLAHAFMLTGVRGVGKTTTARIIARALNCIGADGQGGETAEPCGVCQNCTAIAEDRHVDVMEMDAASRTGVDDIREIIEGVRYKPVSARYKVYIIDEVHMLSKNAFNALLKTLEEPPEHVKFIFATTEIRKVPVTVLSRCQRFDLRRIDMDTLSAHFKGIVEKEGASVSEGALSLISRAADGSVRDGLSLLDQAIAHT--QGEVGEDAVRDMLGLADRARTFDLLDAVMKGDV 277          
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: A0A7C9UXA3_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Magnetospirillum aberrantis SpK TaxID=908842 RepID=A0A7C9UXA3_9PROT)

HSP 1 Score: 409 bits (1052), Expect = 1.180e-137
Identity = 211/273 (77.29%), Postives = 239/273 (87.55%), Query Frame = 0
Query:    6 DSTDTQPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            DS    PYRVLARKYRP+DF+SLIGQEAMV+TL+NAI SGRLAHAF+LTGVRGVGKT+TARIIARALNC G DG+G PT +PCGVCE+C AIAEDRHVD++EMDAASRTGV+DIRE+I+GV YRP SAR+K+YIIDEVHMLS  AFNALLKTLEEPPEHVKF+FATTEIR++PVTVLSRCQRFDLRRV  DVL  HFA IAE E A I   A+ LIARAADGSVRDGLSLLDQAI+H G  T ++E  VRDMLG+A+R +VFDLFEQ+MKG +
Sbjct:    3 DSPAPAPYRVLARKYRPTDFTSLIGQEAMVRTLTNAIQSGRLAHAFVLTGVRGVGKTTTARIIARALNCVGPDGHGGPTIDPCGVCEHCRAIAEDRHVDILEMDAASRTGVNDIREIIEGVRYRPTSARFKVYIIDEVHMLSTAAFNALLKTLEEPPEHVKFVFATTEIRKIPVTVLSRCQRFDLRRVDMDVLAKHFAGIAEQENARIEEAALKLIARAADGSVRDGLSLLDQAISH-GAGT-VSEAQVRDMLGLADRARVFDLFEQVMKGAV 273          
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: UPI001982B32C (DNA polymerase III subunit gamma/tau n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=UPI001982B32C)

HSP 1 Score: 409 bits (1051), Expect = 1.570e-137
Identity = 209/273 (76.56%), Postives = 237/273 (86.81%), Query Frame = 0
Query:    6 DSTDTQPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            D+    PYRVLARKYRP+DFS+LIGQEAMV+TLSNAI SGRLAHAF+LTGVRGVGKT+TARIIARALNC G DG G PT EPCGVC+NC AIAEDRHVD++EMDAASRTG++DIRE+I+GV YRP SAR+KIYIIDEVHMLS  AFNALLKTLEEPPEHVKF+FATTEIR++PVTVLSRCQRFDLRRV+ DVL  HFA IA  E A I  GA+ LIARAADGSVRDGLSLLDQAI+H      ++E  VRDMLG+A+R +VFDLFE +MKG++
Sbjct:    3 DTPKPAPYRVLARKYRPTDFSALIGQEAMVRTLSNAIQSGRLAHAFVLTGVRGVGKTTTARIIARALNCIGPDGKGGPTIEPCGVCDNCRAIAEDRHVDILEMDAASRTGINDIREIIEGVRYRPTSARFKIYIIDEVHMLSTAAFNALLKTLEEPPEHVKFVFATTEIRKIPVTVLSRCQRFDLRRVEIDVLTKHFAGIAAKEDANIEDGALKLIARAADGSVRDGLSLLDQAISHGAGV--VSEAQVRDMLGLADRARVFDLFEHVMKGQM 273          
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Match: A0A6J4FWM4_9PROT (DNA polymerase III subunit gamma/tau n=1 Tax=Magnetospirillum sp. UT-4 TaxID=2681467 RepID=A0A6J4FWM4_9PROT)

HSP 1 Score: 408 bits (1048), Expect = 3.610e-137
Identity = 208/267 (77.90%), Postives = 240/267 (89.89%), Query Frame = 0
Query:   12 PYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHAFILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAEDRHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNAFNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVDHFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEINEDIVRDMLGVAERVQVFDLFEQLMKGEI 278
            PYRVLARKYRP+DF++LIGQEAMV+TL+NAI +GRLAHAF+LTGVRGVGKT+TARIIARALNC G DG+G PT +PCGVCE+C AIAEDRHVD++EMDAASRTGV+DIRE+I+GV YRP SAR+K+YIIDEVHMLS  AFNALLKTLEEPPEHVKF+FATTEIR++PVTVLSRCQRFDLRRV+ +VL  HFA IAE E A I  GA+ LIARAADGSVRDGLSLLDQAI+H G  T ++E  VRDMLG+A+R +VFDLFE++MKGEI
Sbjct:    8 PYRVLARKYRPTDFATLIGQEAMVRTLTNAIQTGRLAHAFVLTGVRGVGKTTTARIIARALNCVGPDGHGGPTIDPCGVCEHCKAIAEDRHVDILEMDAASRTGVNDIREIIEGVRYRPTSARFKVYIIDEVHMLSTQAFNALLKTLEEPPEHVKFVFATTEIRKIPVTVLSRCQRFDLRRVEMEVLAAHFAGIAEKEQAAIEPGALRLIARAADGSVRDGLSLLDQAISH-GAGT-VSEAQVRDMLGLADRARVFDLFERVMKGEI 272          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig99131.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A520NR13_9PROT4.130e-17293.07DNA polymerase III subunit gamma/tau n=1 Tax=Rhodo... [more]
A0A2D7FMI2_9PROT2.930e-16991.81DNA polymerase III subunit gamma/tau n=1 Tax=Rhodo... [more]
A0A2D8G4L3_9PROT5.210e-15685.77DNA polymerase III subunit gamma/tau n=1 Tax=Alpha... [more]
A0A2S6Q5K5_9PROT7.850e-15685.04DNA polymerase III subunit gamma/tau n=1 Tax=Alpha... [more]
A0A2N3Q0L0_9PROT4.030e-14178.75DNA polymerase III subunit gamma/tau n=1 Tax=Telma... [more]
A0A6N7F7A0_9PROT5.350e-14077.09DNA polymerase III subunit gamma/tau n=1 Tax=Alpha... [more]
A0A1E5QC64_9PROT2.960e-13977.24DNA polymerase III subunit gamma/tau n=1 Tax=Magne... [more]
A0A7C9UXA3_9PROT1.180e-13777.29DNA polymerase III subunit gamma/tau n=1 Tax=Magne... [more]
UPI001982B32C1.570e-13776.56DNA polymerase III subunit gamma/tau n=1 Tax=Rhodo... [more]
A0A6J4FWM4_9PROT3.610e-13777.90DNA polymerase III subunit gamma/tau n=1 Tax=Magne... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 47..194
e-value: 1.8E-8
score: 44.2
NoneNo IPR availablePFAMPF13177DNA_pol3_delta2coord: 30..193
e-value: 2.2E-41
score: 141.6
NoneNo IPR availableGENE3D1.10.8.60coord: 194..259
e-value: 3.9E-20
score: 73.1
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 13..276
NoneNo IPR availablePANTHERPTHR11669:SF0PROTEIN STICHEL-LIKE 2coord: 13..276
NoneNo IPR availableCDDcd00009AAAcoord: 29..187
e-value: 7.48211E-12
score: 60.2375
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 5..192
e-value: 2.0E-67
score: 228.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 42..237
IPR012763DNA polymerase III, subunit gamma/ tau, N-terminalTIGRFAMTIGR02397TIGR02397coord: 13..277
e-value: 2.3E-116
score: 386.9
IPR045085DNA polymerase III, subunit gamma/tau, helical lid domainCDDcd18137HLD_clamp_pol_III_gamma_taucoord: 193..259
e-value: 8.86382E-21
score: 81.7822

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig99131contigL-digitata_M_contig99131:126..959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig99131.1.1mRNA_L-digitata_M_contig99131.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig99131 126..959 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig99131.1.1 ID=prot_L-digitata_M_contig99131.1.1|Name=mRNA_L-digitata_M_contig99131.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=278bp
MAEAADSTDTQPYRVLARKYRPSDFSSLIGQEAMVQTLSNAIASGRLAHA
FILTGVRGVGKTSTARIIARALNCTGADGNGEPTAEPCGVCENCVAIAED
RHVDVMEMDAASRTGVDDIRELIDGVLYRPVSARYKIYIIDEVHMLSRNA
FNALLKTLEEPPEHVKFIFATTEIRRVPVTVLSRCQRFDLRRVKFDVLVD
HFARIAETEGATIARGAIGLIARAADGSVRDGLSLLDQAIAHSGPETEIN
EDIVRDMLGVAERVQVFDLFEQLMKGEI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
IPR012763DNA_pol_III_sug/sutau_N
IPR045085HLD_clamp_pol_III_gamma_tau