prot_L-digitata_M_contig9897.1.1 (polypeptide) Laminaria digitata LdigPH10_18mv male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-digitata_M_contig9897.1.1
Unique Nameprot_L-digitata_M_contig9897.1.1
Typepolypeptide
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Sequence length118
Homology
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BLAST of mRNA_L-digitata_M_contig9897.1.1 vs. uniprot
Match: D8LRY9_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.230e-8
Identity = 23/27 (85.19%), Postives = 27/27 (100.00%), Query Frame = 0 
Query:    1 MFNVKGRRCVNPECTRTPVYGKAGDPH 27
            MFNVKGRRC++PECTRTPVYG++GDPH
Sbjct:  630 MFNVKGRRCIHPECTRTPVYGRSGDPH 656
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig9897.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRY9_ECTSI2.230e-885.19EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY9... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 9..43
e-value: 9.0E-7
score: 29.4
coord: 47..81
e-value: 7.4E-9
score: 36.0
NoneNo IPR availableGENE3D6.10.140.110coord: 27..87
e-value: 1.3E-6
score: 30.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig9897contigL-digitata_M_contig9897:590..9190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig9897.1.1mRNA_L-digitata_M_contig9897.1.1Laminaria digitata LdigPH10_18mv malemRNAL-digitata_M_contig9897 575..9255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-digitata_M_contig9897.1.1 ID=prot_L-digitata_M_contig9897.1.1|Name=mRNA_L-digitata_M_contig9897.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=118bp
MFNVKGRRCVNPECTRTPVYGKAGDPHPTYCAAHKLTEMVDIKNPTCREP
TCFRQPSFGSSEDRKATYCASHMLKGMVNVRRMIASTKSSSKVGAAAAAA
AAAAAAAASKGPHHGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys