mRNA_L-digitata_M_contig98371.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig98371.1.1
Unique NamemRNA_L-digitata_M_contig98371.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: A0A220W4S0_9SPHN (Protein translocase subunit SecA n=6 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A220W4S0_9SPHN)

HSP 1 Score: 582 bits (1500), Expect = 2.660e-200
Identity = 297/323 (91.95%), Postives = 311/323 (96.28%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSELLSDFLNKEGVKH+VLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIE+EL +ME+GP++ KAIAKIEEEVRALRE VREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDA+TVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLK R +DVLNL PD DSW+QEDAVEPE+IETRI++MADADF AK A V+AE PGVW+ IEKSILLELLDH
Sbjct:  446 IEKSELLSDFLNKEGVKHNVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEEELGDMEEGPERDKAIAKIEEEVRALREEVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDADTVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKTRVQDVLNLTPDIDSWLQEDAVEPELIETRIAEMADADFAAKKAQVDAEKPGVWEDIEKSILLELLDH 768          
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: A0A6H2DHI5_9SPHN (Protein translocase subunit SecA n=4 Tax=root TaxID=1 RepID=A0A6H2DHI5_9SPHN)

HSP 1 Score: 565 bits (1457), Expect = 9.920e-194
Identity = 292/323 (90.40%), Postives = 305/323 (94.43%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSELLSDFL KE V HSVLNARFHEQEA IVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEM+DGP+K KAIAKIEEEVRALRE VR AGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNA+VADACPPGSYPEQW+I+ LK R  +VL L+PD D WMQED ++PE+IETRIS+MADADFEAK A V+A NPGVW+QIEKSILLELLDH
Sbjct:  452 IEKSELLSDFLKKEDVVHSVLNARFHEQEARIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMDDGPEKDKAIAKIEEEVRALREEVRAAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAIVADACPPGSYPEQWNIDQLKERVEEVLALKPDIDKWMQEDTLDPEIIETRISEMADADFEAKKADVDANNPGVWEQIEKSILLELLDH 774          
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: A0A1N6FX29_9SPHN (Protein translocase subunit SecA n=1 Tax=Parasphingorhabdus marina DSM 22363 TaxID=1123272 RepID=A0A1N6FX29_9SPHN)

HSP 1 Score: 549 bits (1415), Expect = 1.620e-187
Identity = 285/323 (88.24%), Postives = 298/323 (92.26%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSELLSDFL KEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDEL +MEDG +K KAIAKIEEEVRALRE VR AGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQR+EIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDI  LK R  +VL LEPD DSWM E+ +EPE+IETRIS+MAD +F  K+  +E   P +W+QIEKSILLE LDH
Sbjct:  446 IEKSELLSDFLEKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELGDMEDGSEKDKAIAKIEEEVRALREEVRAAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRAEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIPMLKTRVEEVLGLEPDLDSWMTEETLEPEIIETRISEMADDEFNRKVKEIE---PDIWKQIEKSILLESLDH 765          
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: UPI001E3E4672 (preprotein translocase subunit SecA n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=UPI001E3E4672)

HSP 1 Score: 536 bits (1380), Expect = 2.760e-182
Identity = 277/323 (85.76%), Postives = 297/323 (91.95%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSELLSDFL KE V H+VLNARFHEQEAHIVAQAG+PGAVTIATNMAGRGTDIQLGGNIDFRIE EL++ME+GP++ KA+AKIEEEVR LRE VREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMR ET NA+VAD+CPPGSYPEQWDI+ LK R  +V  L PD D+WMQEDAVEPE++ETRI+++ADADF AK   VE  +P +W QIEKSILLE LDH
Sbjct:  446 IEKSELLSDFLKKEDVTHNVLNARFHEQEAHIVAQAGAPGAVTIATNMAGRGTDIQLGGNIDFRIEQELADMEEGPERDKAVAKIEEEVRVLREQVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRLETANAVVADSCPPGSYPEQWDIDLLKKRVEEVFGLTPDIDAWMQEDAVEPEILETRIAELADADFNAK---VEQIDPEIWVQIEKSILLESLDH 765          
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: SECA_ERYLH (Protein translocase subunit SecA n=1 Tax=Erythrobacter litoralis (strain HTCC2594) TaxID=314225 RepID=SECA_ERYLH)

HSP 1 Score: 489 bits (1258), Expect = 7.580e-164
Identity = 248/323 (76.78%), Postives = 280/323 (86.69%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSELLS FL+KEGVKH+VLNARFHE EAHIVAQAG  GAVTIATNMAGRGTDIQLGGN++FRIEDEL +MEDGP++  AI +I+ EV+A RE V EAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFG +T+FAKMMN NLEDGEAIG KWLSKAIETAQKKVEARNY+ RKQVVEYDDVMNDQRKVIYEQR+EIMD+E V DVV DMRH+T+NA+V  ACPPGSYPEQWDIEGLK R  +VL L P FD WM+E+ +EPE+ E RI ++AD   E K+AA +   P +W+++EK ILL+ LDH
Sbjct:  446 IEKSELLSQFLDKEGVKHAVLNARFHESEAHIVAQAGRLGAVTIATNMAGRGTDIQLGGNVEFRIEDELKDMEDGPEREAAIERIKAEVKAEREKVLEAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGPDTLFAKMMNSNLEDGEAIGSKWLSKAIETAQKKVEARNYDIRKQVVEYDDVMNDQRKVIYEQRAEIMDSEAVDDVVVDMRHDTINALVTTACPPGSYPEQWDIEGLKERVEEVLGLAPPFDQWMEEEQIEPEIFEERIRELADKAMEEKIAATD---PAMWKRVEKGILLDRLDH 765          
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: A0A419QZC4_9SPHN (Protein translocase subunit SecA n=2 Tax=Tsuneonella TaxID=2800686 RepID=A0A419QZC4_9SPHN)

HSP 1 Score: 485 bits (1248), Expect = 2.660e-162
Identity = 247/323 (76.47%), Postives = 278/323 (86.07%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSELLSDFL+KEGVKHS+LNARFHE+EAHIVAQAG  GAVTIATNMAGRGTDIQLGGN+DFRIEDELS+M +GP++  AI +IEEEV A +  V+EAGGLFVL TERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFG +T+FA+MMN NLEDGEAIG KWLSKAIETAQKKVEARNY+ RKQVVEYDDVMNDQRKVIYEQR+EIMD+E V DVV DMRH+TVN +V +ACPPGSYPEQW++ GLK R  +VL L P  D W+QED VEPEM+E R+  M+D     K+A +E   P VWQ++EK ILLE LDH
Sbjct:  446 IEKSELLSDFLDKEGVKHSILNARFHEREAHIVAQAGRLGAVTIATNMAGRGTDIQLGGNVDFRIEDELSDMPEGPERDAAIRRIEEEVAAEKAKVKEAGGLFVLATERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGPDTLFARMMNSNLEDGEAIGSKWLSKAIETAQKKVEARNYDIRKQVVEYDDVMNDQRKVIYEQRAEIMDSEAVSDVVVDMRHDTVNTIVGEACPPGSYPEQWNVAGLKERVEEVLGLTPPIDDWLQEDHVEPEMLEERLVQMSDEVMNGKIAEIE---PDVWQRLEKQILLERLDH 765          
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: A0A2D5HH82_9SPHN (Protein translocase subunit SecA (Fragment) n=5 Tax=Novosphingobium TaxID=165696 RepID=A0A2D5HH82_9SPHN)

HSP 1 Score: 478 bits (1230), Expect = 2.470e-161
Identity = 238/323 (73.68%), Postives = 280/323 (86.69%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSELLSDFLNKEGVKHSVLNARFHE EAHIVAQAG  GAVT+ATNMAGRGTDIQLGGN +FR +DEL +M +GP++ +AIA+I+ EV   ++ V +AGGL V+GTERHESRRIDNQLRGRSGRQGDPGLS+FYLCLEDDLLRIFG +T+F+KMMN NL+DGEAIG KWLSKAIETAQKKVEARNYE RKQVVEYDDVMNDQRKVIYEQR++IMDAE V DVV DMRH+T+NA+VADACP GSYPE WD+EGLK R RDVL ++P  ++W+ ED ++PE++E RI++MADA    KM     ++P +W+Q+EKSILL+ LDH
Sbjct:  446 IEKSELLSDFLNKEGVKHSVLNARFHESEAHIVAQAGRLGAVTVATNMAGRGTDIQLGGNFEFRTDDELRDMPEGPEREEAIARIKMEVAEEKQKVLDAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGLSKFYLCLEDDLLRIFGPDTLFSKMMNSNLQDGEAIGSKWLSKAIETAQKKVEARNYEVRKQVVEYDDVMNDQRKVIYEQRADIMDAEAVDDVVVDMRHDTINALVADACPQGSYPEHWDVEGLKERVRDVLAIDPPIETWVDEDGIDPEIVEQRITEMADAHMNEKMGK---DDPSIWRQVEKSILLDRLDH 765          
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: UPI00082C7EF3 (preprotein translocase subunit SecA n=1 Tax=Croceicoccus estronivorus TaxID=1172626 RepID=UPI00082C7EF3)

HSP 1 Score: 482 bits (1241), Expect = 2.980e-161
Identity = 240/323 (74.30%), Postives = 283/323 (87.62%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSELLSDFL KEGVKH+VLNARFHE EAHIVAQAG  GAVTIATNMAGRGTDIQLGGN++FRI+DEL +M +GP++  A+ +++EE+ A ++ V +AGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFG +T+F+KMMN NL DGEAIG +WLSKAIETAQKKVEARNY+ RKQVVEYDDVMNDQRKVIYEQR+EIMD+E V DVV DMRH+TVN +V +ACPPGSYPEQWDI GLK R  DV+ L+P F+ WM+EDA+EPE++E RI D+ADA  +AK+A+ +    G+W+Q+EKS+LL+ LDH
Sbjct:  446 IEKSELLSDFLRKEGVKHAVLNARFHEMEAHIVAQAGRLGAVTIATNMAGRGTDIQLGGNLEFRIDDELKDMPEGPERDTAVERLKEEIAAEKQKVLDAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGPDTLFSKMMNANLADGEAIGSRWLSKAIETAQKKVEARNYDVRKQVVEYDDVMNDQRKVIYEQRAEIMDSEAVDDVVVDMRHDTVNFLVGEACPPGSYPEQWDIAGLKERVDDVMGLQPPFEEWMEEDALEPELLEERIRDLADAKMDAKIASGDV---GIWRQVEKSVLLDRLDH 765          
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: A0A520WYQ1_9SPHN (Protein translocase subunit SecA n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A520WYQ1_9SPHN)

HSP 1 Score: 482 bits (1240), Expect = 3.890e-161
Identity = 243/323 (75.23%), Postives = 277/323 (85.76%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSELLS FL KEGVKH+VLNARFHE EAHIVAQAG  GAVTIATNMAGRGTDIQLGGNI+FRI DELS+MEDGP++  A+ +I  EV A R+ V+EAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFG +T+FA+MMN NLEDGEAIG KWLSKAIETAQKKVEARNY+ RKQVVE+DDVMNDQRKVIYEQR+EIMD+E V DVV DMRH+T+NA+V  +CPPGSYPEQWD+ GLK R  +VL + P  D WM+ED++EPE+ E RI   ADA  +AK+AA +   P VW+++EK ILL+ LDH
Sbjct:  446 IEKSELLSQFLEKEGVKHAVLNARFHESEAHIVAQAGRLGAVTIATNMAGRGTDIQLGGNIEFRINDELSDMEDGPERDAAVERITAEVEAERQKVKEAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGPDTLFARMMNSNLEDGEAIGSKWLSKAIETAQKKVEARNYDVRKQVVEFDDVMNDQRKVIYEQRAEIMDSEAVDDVVVDMRHDTINALVTQSCPPGSYPEQWDVAGLKERVEEVLGMTPPIDQWMEEDSIEPEVFEERIRTEADAQMDAKIAATD---PAVWRRVEKGILLDRLDH 765          
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Match: UPI001F315273 (preprotein translocase subunit SecA n=1 Tax=Erythrobacter sp. SDW2 TaxID=2907154 RepID=UPI001F315273)

HSP 1 Score: 481 bits (1238), Expect = 7.760e-161
Identity = 246/323 (76.16%), Postives = 279/323 (86.38%), Query Frame = 1
Query:    1 IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAGRGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTETMFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVMNDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWDIEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAAVEAENPGVWQQIEKSILLELLDH 969
            IEKSE LS FL+ EGVKH+VLNARFHE EAHIVAQAG  GAVTIATNMAGRGTDIQLGGN++FRI+DEL +MEDGP++ +AI +I+ EVRA RE V  AGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFG +T+FA+MMN NL DGEAIG KWLSKAIETAQKKVEARNY+ RKQVVEYDDVMNDQRKVIYEQR+EIMD+E V DVV DMRH+T+N +V +ACPPGSYPEQW+IEGLK R  +VL L P FD WMQE+A+EPE+ E RI  MA+   EAK+A ++   PG W+++EKSILLE LDH
Sbjct:  446 IEKSEKLSKFLDVEGVKHAVLNARFHESEAHIVAQAGRLGAVTIATNMAGRGTDIQLGGNLEFRIDDELRDMEDGPEREEAIERIKAEVRAEREKVLAAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGPDTLFARMMNSNLADGEAIGSKWLSKAIETAQKKVEARNYDIRKQVVEYDDVMNDQRKVIYEQRAEIMDSEAVDDVVIDMRHDTINTLVGEACPPGSYPEQWNIEGLKTRVEEVLGLTPPFDEWMQEEAIEPEIFEERIVAMANERMEAKIANID---PGTWKRVEKSILLERLDH 765          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig98371.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A220W4S0_9SPHN2.660e-20091.95Protein translocase subunit SecA n=6 Tax=Sphingomo... [more]
A0A6H2DHI5_9SPHN9.920e-19490.40Protein translocase subunit SecA n=4 Tax=root TaxI... [more]
A0A1N6FX29_9SPHN1.620e-18788.24Protein translocase subunit SecA n=1 Tax=Parasphin... [more]
UPI001E3E46722.760e-18285.76preprotein translocase subunit SecA n=2 Tax=Sphing... [more]
SECA_ERYLH7.580e-16476.78Protein translocase subunit SecA n=1 Tax=Erythroba... [more]
A0A419QZC4_9SPHN2.660e-16276.47Protein translocase subunit SecA n=2 Tax=Tsuneonel... [more]
A0A2D5HH82_9SPHN2.470e-16173.68Protein translocase subunit SecA (Fragment) n=5 Ta... [more]
UPI00082C7EF32.980e-16174.30preprotein translocase subunit SecA n=1 Tax=Crocei... [more]
A0A520WYQ1_9SPHN3.890e-16175.23Protein translocase subunit SecA n=2 Tax=Sphingomo... [more]
UPI001F3152737.760e-16176.16preprotein translocase subunit SecA n=1 Tax=Erythr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig98371contigL-digitata_M_contig98371:2..970 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog314225.ELI_05095
Preferred namesecA
PFAMsSEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW
Model size969
Max annot lvl204457|Sphingomonadales
KEGG koko:K03070
KEGG TC3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.24e-164
EggNOG OGsCOG0653@1|root,COG0653@2|Bacteria,1MUJZ@1224|Proteobacteria,2TTBF@28211|Alphaproteobacteria,2K1MX@204457|Sphingomonadales
DescriptionPart of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
Cds size969
COG categoryU
BRITEko00000,ko00001,ko00002,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682408640.8076932-CDS-L-digitata_M_contig98371:1..9701682408640.8076932-CDS-L-digitata_M_contig98371:1..970Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig98371 2..970 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig98371.1.1prot_L-digitata_M_contig98371.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig98371 2..970 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig98371.1.1

>prot_L-digitata_M_contig98371.1.1 ID=prot_L-digitata_M_contig98371.1.1|Name=mRNA_L-digitata_M_contig98371.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=323bp
IEKSELLSDFLNKEGVKHSVLNARFHEQEAHIVAQAGSPGAVTIATNMAG
RGTDIQLGGNIDFRIEDELSEMEDGPDKAKAIAKIEEEVRALRETVREAG
GLFVLGTERHESRRIDNQLRGRSGRQGDPGLSRFYLCLEDDLLRIFGTET
MFAKMMNKNLEDGEAIGGKWLSKAIETAQKKVEARNYEARKQVVEYDDVM
NDQRKVIYEQRSEIMDAETVGDVVEDMRHETVNAMVADACPPGSYPEQWD
IEGLKARTRDVLNLEPDFDSWMQEDAVEPEMIETRISDMADADFEAKMAA
VEAENPGVWQQIEKSILLELLDH
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mRNA from alignment at L-digitata_M_contig98371:2..970-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig98371.1.1 ID=mRNA_L-digitata_M_contig98371.1.1|Name=mRNA_L-digitata_M_contig98371.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=969bp|location=Sequence derived from alignment at L-digitata_M_contig98371:2..970- (Laminaria digitata LdigPH10_18mv male)
ATCGAGAAGTCCGAACTGCTCTCCGACTTCCTCAACAAGGAAGGGGTGAA GCACAGTGTTCTGAATGCCCGCTTCCACGAGCAGGAGGCTCATATCGTGG CACAGGCCGGCTCTCCCGGAGCCGTGACAATTGCCACCAACATGGCGGGG CGTGGTACCGATATCCAACTCGGCGGGAATATCGACTTCCGGATCGAGGA CGAACTGTCTGAAATGGAAGATGGTCCGGATAAGGCCAAGGCGATTGCCA AGATCGAGGAAGAAGTGCGGGCGCTGCGCGAGACGGTTCGGGAAGCTGGA GGCCTGTTCGTGCTCGGCACCGAACGTCACGAAAGCCGGCGGATCGACAA CCAGTTGCGCGGCCGTTCGGGCCGTCAGGGCGACCCCGGTCTCAGCCGTT TCTATCTCTGTCTCGAGGATGATCTGCTGCGTATCTTCGGCACCGAGACC ATGTTCGCCAAGATGATGAACAAGAATCTCGAGGACGGCGAGGCGATTGG CGGCAAGTGGCTGTCCAAAGCCATTGAAACAGCCCAGAAAAAGGTTGAAG CGCGCAACTATGAAGCGCGCAAGCAAGTCGTCGAATATGATGACGTGATG AACGACCAGCGCAAGGTGATCTATGAGCAGCGCTCCGAAATCATGGACGC GGAAACGGTCGGCGATGTCGTCGAGGACATGCGGCACGAAACGGTTAACG CGATGGTGGCCGATGCCTGCCCGCCGGGCAGCTATCCGGAACAATGGGAT ATCGAAGGCCTGAAGGCCCGGACTCGGGACGTGCTCAATCTCGAGCCCGA TTTCGACAGCTGGATGCAGGAAGACGCGGTCGAGCCGGAAATGATCGAAA CCCGTATCTCCGATATGGCTGATGCCGATTTCGAGGCCAAAATGGCTGCG GTCGAAGCCGAAAACCCCGGCGTCTGGCAACAGATCGAGAAATCGATTCT GCTCGAACTGCTCGACCAT
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Coding sequence (CDS) from alignment at L-digitata_M_contig98371:2..970-

>mRNA_L-digitata_M_contig98371.1.1 ID=mRNA_L-digitata_M_contig98371.1.1|Name=mRNA_L-digitata_M_contig98371.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=969bp|location=Sequence derived from alignment at L-digitata_M_contig98371:2..970- (Laminaria digitata LdigPH10_18mv male)
ATCGAGAAGTCCGAACTGCTCTCCGACTTCCTCAACAAGGAAGGGGTGAA
GCACAGTGTTCTGAATGCCCGCTTCCACGAGCAGGAGGCTCATATCGTGG
CACAGGCCGGCTCTCCCGGAGCCGTGACAATTGCCACCAACATGGCGGGG
CGTGGTACCGATATCCAACTCGGCGGGAATATCGACTTCCGGATCGAGGA
CGAACTGTCTGAAATGGAAGATGGTCCGGATAAGGCCAAGGCGATTGCCA
AGATCGAGGAAGAAGTGCGGGCGCTGCGCGAGACGGTTCGGGAAGCTGGA
GGCCTGTTCGTGCTCGGCACCGAACGTCACGAAAGCCGGCGGATCGACAA
CCAGTTGCGCGGCCGTTCGGGCCGTCAGGGCGACCCCGGTCTCAGCCGTT
TCTATCTCTGTCTCGAGGATGATCTGCTGCGTATCTTCGGCACCGAGACC
ATGTTCGCCAAGATGATGAACAAGAATCTCGAGGACGGCGAGGCGATTGG
CGGCAAGTGGCTGTCCAAAGCCATTGAAACAGCCCAGAAAAAGGTTGAAG
CGCGCAACTATGAAGCGCGCAAGCAAGTCGTCGAATATGATGACGTGATG
AACGACCAGCGCAAGGTGATCTATGAGCAGCGCTCCGAAATCATGGACGC
GGAAACGGTCGGCGATGTCGTCGAGGACATGCGGCACGAAACGGTTAACG
CGATGGTGGCCGATGCCTGCCCGCCGGGCAGCTATCCGGAACAATGGGAT
ATCGAAGGCCTGAAGGCCCGGACTCGGGACGTGCTCAATCTCGAGCCCGA
TTTCGACAGCTGGATGCAGGAAGACGCGGTCGAGCCGGAAATGATCGAAA
CCCGTATCTCCGATATGGCTGATGCCGATTTCGAGGCCAAAATGGCTGCG
GTCGAAGCCGAAAACCCCGGCGTCTGGCAACAGATCGAGAAATCGATTCT
GCTCGAACTGCTCGACCAT
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