mRNA_L-digitata_M_contig101374.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A059E8I8_9PROT (Enoyl-CoA hydratase n=7 Tax=root TaxID=1 RepID=A0A059E8I8_9PROT) HSP 1 Score: 385 bits (988), Expect = 2.400e-132 Identity = 192/194 (98.97%), Postives = 192/194 (98.97%), Query Frame = 3
Query: 345 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLE DDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMI ADEAFRIGLVEQVVADADFDSACQDLADR
Sbjct: 1 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLETDDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMIRADEAFRIGLVEQVVADADFDSACQDLADR 194
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A059E7B3_9PROT (Enoyl-CoA hydratase n=2 Tax=Hyphomonas TaxID=85 RepID=A0A059E7B3_9PROT) HSP 1 Score: 345 bits (885), Expect = 1.100e-116 Identity = 171/194 (88.14%), Postives = 179/194 (92.27%), Query Frame = 3
Query: 345 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
MSE LVLRQD DGLATLTLNRPDKLNSLTVGMF+ELR HVLDL+ DDS+ CV+LRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIA+++ARFGDTHAKWALTPIWGMSQRLPRRVG+ATAKRLMFTADMI A EAFRIGL EQVVA FD AC LA R
Sbjct: 1 MSEALVLRQDNDGLATLTLNRPDKLNSLTVGMFQELRRHVLDLQKDDSIGCVVLRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIASDTARFGDTHAKWALTPIWGMSQRLPRRVGVATAKRLMFTADMIDAQEAFRIGLAEQVVAADRFDEACDALARR 194
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A062U466_9PROT (Enoyl-CoA hydratase n=3 Tax=Hyphomonas TaxID=85 RepID=A0A062U466_9PROT) HSP 1 Score: 330 bits (846), Expect = 8.930e-111 Identity = 161/188 (85.64%), Postives = 176/188 (93.62%), Query Frame = 3
Query: 357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLA 920
LVLRQDKDGLATLTLNRPDKLN+LTVG+FRELR +VLD++ DDSV+CV+LRGAGKCFSAGHDL DIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFI+AAESARFGDTHAKWALTP+WGMSQRLPRRVGIATAKRLMFTA+M A EA RIGL E V D++FD+A ++LA
Sbjct: 4 LVLRQDKDGLATLTLNRPDKLNALTVGVFRELRQNVLDIQTDDSVHCVVLRGAGKCFSAGHDLADIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIVAAESARFGDTHAKWALTPVWGMSQRLPRRVGIATAKRLMFTAEMFGAAEAHRIGLAEHVYPDSEFDAAVENLA 191
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A069E5U6_9PROT (Enoyl-CoA hydratase/isomerase n=8 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A069E5U6_9PROT) HSP 1 Score: 325 bits (834), Expect = 6.140e-109 Identity = 164/194 (84.54%), Postives = 174/194 (89.69%), Query Frame = 3
Query: 345 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
MS+ LV R+D DG A LTLNRPDKLN+LTVGMFRELR HV DL DD+V+CVILRGAGKCFSAGHDL DIAEGE VPS GWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFI+AAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTA+MI A+EAFRIGL E VV DA+FDSA LA +
Sbjct: 1 MSDTLVTREDHDGCAILTLNRPDKLNALTVGMFRELRAHVSDLYKDDTVSCVILRGAGKCFSAGHDLADIAEGEAVPSRGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIMAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTAEMIGAEEAFRIGLAEMVVPDAEFDSAILKLAQQ 194
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A059G5S1_9PROT (Enoyl-CoA hydratase/isomerase n=2 Tax=Hyphomonas TaxID=85 RepID=A0A059G5S1_9PROT) HSP 1 Score: 323 bits (829), Expect = 2.870e-108 Identity = 156/190 (82.11%), Postives = 174/190 (91.58%), Query Frame = 3
Query: 357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
LVLR+D+DGLA LTLNRPDKLNSLTVG+FRELR HV+DL++DD++ CV+LRGAG+CFSAGHDLGDIAEGEKVPSPGWHSETLR++E LPKPVIAAVHGHCYTGALEVALAADFIIAAESA+FGDTHAKWAL PIWGMSQRLPRRVGIATAKRLMFTA+M A EA RIGL EQVV DA+FD + +A +
Sbjct: 4 LVLREDRDGLAVLTLNRPDKLNSLTVGVFRELREHVIDLKSDDTIGCVVLRGAGRCFSAGHDLGDIAEGEKVPSPGWHSETLRMLETLPKPVIAAVHGHCYTGALEVALAADFIIAAESAKFGDTHAKWALAPIWGMSQRLPRRVGIATAKRLMFTAEMFGAAEALRIGLAEQVVPDAEFDVSIDAMAQK 193
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A059FUP4_9PROT (Enoyl-CoA hydratase/isomerase n=1 Tax=Hyphomonas johnsonii MHS-2 TaxID=1280950 RepID=A0A059FUP4_9PROT) HSP 1 Score: 318 bits (814), Expect = 5.440e-106 Identity = 156/190 (82.11%), Postives = 171/190 (90.00%), Query Frame = 3
Query: 357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
LV R D++GLA LTLNRPDKLN+LTVGMFRELR H + L+ DDS+ CV+LRGAG+CFSAGHDLGDIAEGE VPSPGWHSETLRL+E LPKPVIAAVHGHCYTGALEVALAADFIIAAESA+FGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTA++I A EAFRIGL EQVV DA FD+A +A +
Sbjct: 4 LVTRDDRNGLAILTLNRPDKLNALTVGMFRELRAHAIALKKDDSIGCVVLRGAGRCFSAGHDLGDIAEGEAVPSPGWHSETLRLLETLPKPVIAAVHGHCYTGALEVALAADFIIAAESAKFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTAELIGAAEAFRIGLAEQVVPDAGFDAAIDAMAQQ 193
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A062VH01_9PROT (Enoyl-CoA hydratase/isomerase n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A062VH01_9PROT) HSP 1 Score: 314 bits (804), Expect = 1.860e-104 Identity = 156/188 (82.98%), Postives = 168/188 (89.36%), Query Frame = 3
Query: 357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLA 920
+VLR+D+DGLA LTLNRPDKLNSLTVGMF ELR HVL L DDS+ CV+LRGAG+CFSAGHDL DIAEGE VPS GWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESA+FGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTA+M A EA R+GL E VV DA+FD+A +A
Sbjct: 3 VVLREDRDGLAILTLNRPDKLNSLTVGMFEELRKHVLALYKDDSIGCVVLRGAGRCFSAGHDLADIAEGEAVPSRGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESAKFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTAEMFGAAEAHRMGLAELVVPDAEFDAAIDGIA 190
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0Y8D8_9GAMM (Enoyl-CoA hydratase/isomerase n=1 Tax=marine gamma proteobacterium HTCC2143 TaxID=247633 RepID=A0Y8D8_9GAMM) HSP 1 Score: 313 bits (803), Expect = 2.920e-104 Identity = 154/190 (81.05%), Postives = 170/190 (89.47%), Query Frame = 3
Query: 357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
LV+R DKDG A LTLNRPDKLNSLTVG+F+ELR H+LDL AD +++C++LRGAGKCFSAGHDLGDIAEGE+VPS GWHSETLRLME+LPKPVIAAVHGHCYTGALEVALAADFIIAA++ARFGDTHAKWALTP+WGMSQRLPRRVGIATAKRLMFTADMI ADEA RIGL E V FD+ + LA R
Sbjct: 8 LVIRNDKDGCAWLTLNRPDKLNSLTVGVFKELRGHILDLRADKNIHCIVLRGAGKCFSAGHDLGDIAEGEEVPSRGWHSETLRLMEKLPKPVIAAVHGHCYTGALEVALAADFIIAADNARFGDTHAKWALTPVWGMSQRLPRRVGIATAKRLMFTADMIGADEAVRIGLAEYAVPLDKFDAEVEALARR 197
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A0F2RJ18_9PROT (Enoyl-CoA hydratase n=1 Tax=Hyphomonas sp. BRH_c22 TaxID=1629710 RepID=A0A0F2RJ18_9PROT) HSP 1 Score: 313 bits (801), Expect = 5.120e-104 Identity = 152/188 (80.85%), Postives = 171/188 (90.96%), Query Frame = 3
Query: 357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLA 920
LV R+DKDGLA LTLNRPDKLNSLTVGMFRELR H + L+ D+++ CV+LRGAG+CFSAGHDLGDIAEGEKVPSPGWHSETLR++E LP+PVIAAVHGHCYTGALEVALAADFIIAA++A+FGDTHAKWALTPIWGMSQRLPRRVG+ATAKRLMFTA+MI+A EA RIGL EQVV +FD+A LA
Sbjct: 4 LVTREDKDGLALLTLNRPDKLNSLTVGMFRELRAHAIALKKDETIGCVVLRGAGRCFSAGHDLGDIAEGEKVPSPGWHSETLRMLETLPQPVIAAVHGHCYTGALEVALAADFIIAADTAKFGDTHAKWALTPIWGMSQRLPRRVGVATAKRLMFTAEMINAAEALRIGLAEQVVPADEFDAAIDALA 191
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: UPI001F20F1B0 (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Sulfitobacter sp. M220 TaxID=2675333 RepID=UPI001F20F1B0) HSP 1 Score: 310 bits (795), Expect = 4.030e-103 Identity = 153/194 (78.87%), Postives = 170/194 (87.63%), Query Frame = 3
Query: 345 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
MSE LVLR+DKDG A LTLNRP+KLNSLTV +F+ELR H++DL DD++ CV+LRGAGKCFSAGHDLGDIAEGE VPS GWHSETLRLME+LPKPVIAAVHGHCYTGALEVALAADFI+A+ +ARFGDTHAKWALTP+WGMSQRLPRRVGIATAKRLMFTADMI A+EA RIGL E VV FD+ + L R
Sbjct: 1 MSE-LVLREDKDGWAVLTLNRPEKLNSLTVSLFKELRQHIIDLRDDDAIRCVVLRGAGKCFSAGHDLGDIAEGEDVPSAGWHSETLRLMEKLPKPVIAAVHGHCYTGALEVALAADFIVASATARFGDTHAKWALTPVWGMSQRLPRRVGIATAKRLMFTADMIDANEAVRIGLAEYVVPPDQFDAEIEQLVAR 193 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101374.1.1 >prot_L-digitata_M_contig101374.1.1 ID=prot_L-digitata_M_contig101374.1.1|Name=mRNA_L-digitata_M_contig101374.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=194bp MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNback to top mRNA from alignment at L-digitata_M_contig101374:3..928- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101374.1.1 ID=mRNA_L-digitata_M_contig101374.1.1|Name=mRNA_L-digitata_M_contig101374.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=926bp|location=Sequence derived from alignment at L-digitata_M_contig101374:3..928- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101374:3..928- >mRNA_L-digitata_M_contig101374.1.1 ID=mRNA_L-digitata_M_contig101374.1.1|Name=mRNA_L-digitata_M_contig101374.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=582bp|location=Sequence derived from alignment at L-digitata_M_contig101374:3..928- (Laminaria digitata LdigPH10_18mv male)back to top |