mRNA_L-digitata_M_contig101361.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A2D7FKH1_9PROT (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FKH1_9PROT) HSP 1 Score: 523 bits (1348), Expect = 5.860e-182 Identity = 264/306 (86.27%), Postives = 286/306 (93.46%), Query Frame = 1
Query: 1 PVDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELARAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAAHYDTS 918
PVDRDAL RM+N+MI+RGPDGEG W++++ RTGFAHRRLSIIDL+DSGAQPMQMDGGRL+ITYNGEIYNFR LRAEL+QQGRRFRSESDTEVLLHLYDRDGA MVE LRGMFAFAI+D KQ VFLARDGFGIKPLYYANDG+TLRFASQVKALLAGG IDT PSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMW+DA GA P+++FDVT EL RA++ PEQ+S E+LR ALLDTLQHHLVADVPVGAFLSAGLDSATIVAL AELQP+ALRSVTLAFEEFDNTEFDEAALAEKIA+HYDTS
Sbjct: 16 PVDRDALLRMSNSMISRGPDGEGNWVSENLRTGFAHRRLSIIDLSDSGAQPMQMDGGRLMITYNGEIYNFRELRAELEQQGRRFRSESDTEVLLHLYDRDGAAMVERLRGMFAFAIHDCKKQAVFLARDGFGIKPLYYANDGRTLRFASQVKALLAGGDIDTAPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWVDATGAGEPVKFFDVTHELERASETPEQWSWENLRNALLDTLQHHLVADVPVGAFLSAGLDSATIVALAAELQPNALRSVTLAFEEFDNTEFDEAALAEKIASHYDTS 321
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A2D8PUT0_9PROT (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PUT0_9PROT) HSP 1 Score: 466 bits (1199), Expect = 2.220e-159 Identity = 229/306 (74.84%), Postives = 260/306 (84.97%), Query Frame = 1
Query: 1 PVDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELARAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAAHYDTS 918
PVD D L+RMN+AM+ RGPDG+G W+++D RTGFAHRRLSIIDLT+ G QP Q+ GGR VIT+NGEIYNFR LR ELK QG RF++ SDTEVLLHLY RDG+DMVEHLRGMFAFAI+D KQG+FLARDGFGIKPLYY++DG T RFASQVKALLAG IDT+PSAAG AG YVWG VPEPWT+F IR+LPAG TMWID GAR+P RYFDVT +L A + P ++P+ LR ALLDT +HHLVADVPVGAFLSAGLDSATIV LT+ELQ DALRSVTLAF+EFD T+FDEA LAEKIA HYDT+
Sbjct: 16 PVDIDCLTRMNDAMVPRGPDGDGIWISEDERTGFAHRRLSIIDLTEGGTQPKQLAGGRYVITFNGEIYNFRELRXELKAQGNRFKTNSDTEVLLHLYQRDGSDMVEHLRGMFAFAIFDREKQGIFLARDGFGIKPLYYSDDGGTFRFASQVKALLAGREIDTEPSAAGRAGFYVWGYVPEPWTMFKKIRALPAGCTMWIDHNGARSPARYFDVTWDLEAAMETPASWTPDRLREALLDTXRHHLVADVPVGAFLSAGLDSATIVGLTSELQADALRSVTLAFDEFDGTQFDEATLAEKIARHYDTA 321
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A520NVW7_9PROT (Asparagine synthase (Glutamine-hydrolyzing) n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NVW7_9PROT) HSP 1 Score: 446 bits (1148), Expect = 1.160e-151 Identity = 223/306 (72.88%), Postives = 252/306 (82.35%), Query Frame = 1
Query: 1 PVDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELARAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAAHYDTS 918
PVDR++L RM AMI RGPDG+G W++ + G HRRLSIIDL++ GAQPM +DG RL ITYNGEIYNFRALR EL+ +G +F S SDTEVLLHLYDR G MVE LRGMF+FAI+D K+G+FLARDGFGIKPLYY +DG T RFASQVKALLAGGGID PSAAG AG YVWG VPEPWT+F+NIR+LPAG T+WID G R P RYFDVT L AAD+P ++ LR ALLDTL+HHLVADVPVGAFLSAGLDSATIV LT+E+Q DALRSVTLAF+EFD T+FDEA LAEKIAAHYDTS
Sbjct: 16 PVDRNSLDRMTRAMIPRGPDGDGTWISGENGVGLGHRRLSIIDLSEGGAQPMVLDGNRLSITYNGEIYNFRALREELECEGAKFVSGSDTEVLLHLYDRHGTSMVEKLRGMFSFAIFDRNKRGLFLARDGFGIKPLYYTDDGATFRFASQVKALLAGGGIDNAPSAAGQAGFYVWGYVPEPWTMFENIRALPAGCTLWIDGNGVRTPRRYFDVTDVLQAAADSPSDWAQTELRDALLDTLKHHLVADVPVGAFLSAGLDSATIVGLTSEIQDDALRSVTLAFDEFDGTQFDEATLAEKIAAHYDTS 321
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A2S6QAA3_9PROT (Asparagine synthetase [glutamine-hydrolyzing] 1 n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QAA3_9PROT) HSP 1 Score: 426 bits (1096), Expect = 8.410e-144 Identity = 215/305 (70.49%), Postives = 247/305 (80.98%), Query Frame = 1
Query: 4 VDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELARAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAAHYDTS 918
+D +LSRM++ M RGPDG+G W++ D+R GF+HRRLSIIDL+D G+QPM D GRL ITYNGEIYN+R LR EL+ G F+S SDTEVLLHLYDR G MVE LRGMFAFAI+D K G+ LARDGFGIKPLYY++DG TL FASQVKALLA G IDT PSA G AG YVWG VPEPWT+F++IR+LPAGSTMWID GAR P RYFDVT ELA A ++ LR ALLDTL+HHLVADVPVGAFLSAGLDSATIV LT+E+QP LRSVTLAF+EF+ TEFDEAALAE++A HYDT+
Sbjct: 17 LDSASLSRMSDVMAPRGPDGKGKWISADSRVGFSHRRLSIIDLSDGGSQPMLFDHGRLTITYNGEIYNYRELRRELEASGHSFQSGSDTEVLLHLYDRYGRAMVERLRGMFAFAIHDRKKGGILLARDGFGIKPLYYSDDGTTLWFASQVKALLASGNIDTSPSAPGRAGFYVWGYVPEPWTMFEHIRALPAGSTMWIDGNGARTPQRYFDVTAELAAAEGDSAAWAGADLRDALLDTLRHHLVADVPVGAFLSAGLDSATIVGLTSEIQPKGLRSVTLAFDEFEGTEFDEAALAERVATHYDTA 321
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A2D8G6P3_9PROT (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G6P3_9PROT) HSP 1 Score: 406 bits (1044), Expect = 6.000e-136 Identity = 203/305 (66.56%), Postives = 240/305 (78.69%), Query Frame = 1
Query: 4 VDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELARAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAAHYDTS 918
VD D LSRM AM+ RGP G G W++ + GF HRRLS IDL++ GAQPM ++ GRL IT+NGEIYNFR LRA+LK G F++ SDT VLLHLYDR G MVE +RGMFA AI+D + GVFLARDGFGIKPLYY +DG+++RFASQVKALLAGGG+DT PSAAG AG YVWG VPEPWT+F NI +LPAGST+WI+ G AP RYFDV EL A + + +S + LR ALL+TL++HLVADVPVG FLSAGLDSATIV L +E++ DAL S+TLAFEEF T+FDEAALAEKIA HY T+
Sbjct: 17 VDHDCLSRMTXAMVPRGPXGSGVWISXNKXVGFGHRRLSXIDLSEGGAQPMVLNNGRLAITFNGEIYNFRELRADLKATGHIFKTCSDTXVLLHLYDRYGHAMVERIRGMFALAIHDRERGGVFLARDGFGIKPLYYTDDGKSIRFASQVKALLAGGGLDTSPSAAGHAGFYVWGYVPEPWTMFKNIHALPAGSTLWINKNGHAAPYRYFDVIAELEAADNGSDNWSQDDLRHALLETLKYHLVADVPVGTFLSAGLDSATIVGLASEIKTDALHSITLAFEEFKGTQFDEAALAEKIATHYQTA 321
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A6N7FAJ4_9PROT (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FAJ4_9PROT) HSP 1 Score: 357 bits (916), Expect = 1.420e-116 Identity = 189/301 (62.79%), Postives = 226/301 (75.08%), Query Frame = 1
Query: 1 PVDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELARAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAA 903
PVD L R+++AM ARGPDGEG WLA D R G AHRRLSIIDLTD GAQPM I +NGEIYN+RALR EL G+RF +ESDTEVLLHLY R G +MV LRGMFAFAI+D + GVF+ARD +GIKPLY+A+DG+T+ ASQVKALLAGGGIDT P AG AG ++ G VPEP TL+ I +LP+G ++WID G +P R+FD+T L A +AP F ++LRAAL D++ HHLVADVPVGAFLS+GLDSATIV+L AE + LR+VTLAF+EF T DEA LA +IAA
Sbjct: 16 PVDEARLRRIHDAMAARGPDGEGVWLAGDGRLGMAHRRLSIIDLTDGGAQPMAARDAPCRIVFNGEIYNYRALREELIGAGQRFDTESDTEVLLHLYTRHGPEMVRKLRGMFAFAIWDGVRHGVFMARDPYGIKPLYFADDGRTVACASQVKALLAGGGIDTSPEPAGHAGFFMLGYVPEPHTLYRGIEALPSGGSLWIDTSGRGSPRRWFDLTATLREAGEAP--FDADALRAALEDSVAHHLVADVPVGAFLSSGLDSATIVSLAAERRGADLRTVTLAFDEFRGTSHDEAPLAAEIAA 314
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A2E6GT27_9PROT (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GT27_9PROT) HSP 1 Score: 351 bits (901), Expect = 2.220e-114 Identity = 179/306 (58.50%), Postives = 225/306 (73.53%), Query Frame = 1
Query: 1 PVDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELARAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAAHYDTS 918
P+DR L +++ RGPD EG W++DD R AHRRLSIIDL+D+GAQPM G I YNGEIYN+RALR EL G RS SDTEVLLHLY R G MV+ LRGMFAFAI+D ++G+F+ARD +GIKPLY+A++G TLR ASQVKAL+AGG IDT P+ AG G ++ G VPEP TL+ I+++PAG ++W+D G AP R+FD+T+EL AP + E LRAAL++++QHHLVADVPVG FLSAGLDSA++VAL +E LR+VTL F++F TE DEA LAE +A HY+TS
Sbjct: 16 PIDRTQLDAIHDRQAPRGPDSEGVWISDDNRIAIAHRRLSIIDLSDAGAQPMVSPDGAYRIVYNGEIYNYRALRQELIDSGVELRSNSDTEVLLHLYMRKGPAMVDSLRGMFAFAIWDETRRGIFMARDAYGIKPLYFADNGNTLRVASQVKALVAGGSIDTSPNPAGHVGFFMLGYVPEPHTLYKGIQAIPAGGSLWVDTSGRGAPHRWFDITKELRDVEPAP--YDAEKLRAALVESMQHHLVADVPVGVFLSAGLDSASLVALASEQHGANLRTVTLGFKQFRGTENDEAPLAEVLAKHYETS 319
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A1Z9JEL1_9PROT (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Rhodospirillaceae bacterium TMED167 TaxID=1986863 RepID=A0A1Z9JEL1_9PROT) HSP 1 Score: 348 bits (892), Expect = 5.290e-113 Identity = 186/310 (60.00%), Postives = 226/310 (72.90%), Query Frame = 1
Query: 1 PVDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGG----RLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELA-RAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAAHYDT 915
PV + R+N M ARGPDGEG W ++D R GF HRRL+IID +++GAQPMQ+ GG RLVITYNGEIYN++ LR EL +GR F S SDTEVLLHLYDRDG +MV LRGMFA AI+D KQGVFLARD FGIKPLYYA DG+T R ASQVKALLAGG IDT P G G +++G VPEP TL++ +++LP+GS++WID +GA A YFDV+ LA R+A+ + E L AAL D++ HHLV+DVPVG FLSAGLDSAT+ L +E AL+S+TL F+E DEA LAE+IA Y T
Sbjct: 16 PVAAGEVRRINERMRARGPDGEGEWFSNDRRIGFGHRRLAIIDPSETGAQPMQLAGGDGTPRLVITYNGEIYNYQILRDELTAEGRSFASNSDTEVLLHLYDRDGPEMVHKLRGMFALAIWDVEKQGVFLARDPFGIKPLYYATDGKTFRAASQVKALLAGGQIDTSPDPGGHVGFFMFGYVPEPHTLYNGVKALPSGSSLWIDRKGAPAVRTYFDVSAHLAARSAEVSKSDVLEKLHAALSDSVAHHLVSDVPVGVFLSAGLDSATVTGLASEHTNAALQSMTLQFDELAGGNMDEAPLAEEIATLYQT 325
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A6J4FPA6_9PROT (Asparagine synthetase n=1 Tax=Magnetospirillum sp. UT-4 TaxID=2681467 RepID=A0A6J4FPA6_9PROT) HSP 1 Score: 344 bits (882), Expect = 1.100e-111 Identity = 182/305 (59.67%), Postives = 221/305 (72.46%), Query Frame = 1
Query: 1 PVDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELARAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAAHYDT 915
PVD AL+R +AM+ARGPDG G WLA + R G AHRRL+II+L++SGAQPM GRL I +NGEIYN+RALRA L+ +G FRS SDTEV+L LY R G DM+ LRGMFAFA++D +QG+ LARD GIKPLY A+DG+TLR ASQVKALLAGGGID++P AG AG ++WG VPEP TL+ +IR+LPAGS +W A G A R+FD+ ELA P LRA LLD++ HHL ADVPVG FLSAGLDS T+ AL +E +R++TL F+EF T DE LAE +A HYDT
Sbjct: 15 PVDAAALTRSRDAMVARGPDGAGLWLAPEGRVGLAHRRLAIIELSESGAQPMASSCGRLRIVFNGEIYNYRALRAGLEAEGVAFRSGSDTEVILALYRRHGRDMLPLLRGMFAFALWDEDRQGMLLARDQLGIKPLYVADDGKTLRAASQVKALLAGGGIDSEPDPAGHAGFFLWGHVPEPHTLYRHIRALPAGSWLWAGAGGDVAEGRFFDLGAELANPRGGPAP----GLRAVLLDSMNHHLEADVPVGVFLSAGLDSTTLAALASECAGGRVRTLTLGFDEFAGTAKDEVPLAEAVARHYDT 315
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Match: A0A7C1UI11_9PROT (Asparagine synthase (Glutamine-hydrolyzing) (Fragment) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7C1UI11_9PROT) HSP 1 Score: 340 bits (872), Expect = 4.110e-111 Identity = 177/303 (58.42%), Postives = 216/303 (71.29%), Query Frame = 1
Query: 1 PVDRDALSRMNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLVITYNGEIYNFRALRAELKQQGRRFRSESDTEVLLHLYDRDGADMVEHLRGMFAFAIYDHAKQGVFLARDGFGIKPLYYANDGQTLRFASQVKALLAGGGIDTKPSAAGLAGIYVWGSVPEPWTLFDNIRSLPAGSTMWIDAQGARAPIRYFDVTQELARAADAPEQFSPESLRAALLDTLQHHLVADVPVGAFLSAGLDSATIVALTAELQPDALRSVTLAFEEFDNTEFDEAALAEKIAAHY 909
PV L + +AM++RGPDG G W+ ++ R G HRRLSIIDL+ AQPM +DGGRL ITYNGEIYN+RALR EL+ QGR FR+ SDTEVLLHLYD G M E LRGMFAFA++D +QG+FLARD FG+KPLY A+DG+TLR ASQVKALLAGGG+D P AG G +++GSVPEP TL+ IR LPAG T+W+D G R+FD+ + LA D E +P LR A D++ HHLVADVPVG FLS+G+DSA + L +E L +VTL F+EF+ T DE LAE IAA Y
Sbjct: 16 PVAESELLGIRDAMVSRGPDGAGLWVGEEGRIGLGHRRLSIIDLSTGAAQPMSLDGGRLRITYNGEIYNYRALRRELEDQGRVFRTGSDTEVLLHLYDALGPAMAERLRGMFAFALWDRERQGLFLARDPFGVKPLYVADDGKTLRCASQVKALLAGGGVDRAPDPAGHVGFFLFGSVPEPHTLYAAIRPLPAGGTLWVDRSGTHREGRFFDLGETLAGTED--ETPAPLDLRRAFKDSVFHHLVADVPVGVFLSSGIDSAALTGLASEEHGAGLATVTLGFDEFEGTPRDETPLAETIAALY 316 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101361.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101361.1.1 >prot_L-digitata_M_contig101361.1.1 ID=prot_L-digitata_M_contig101361.1.1|Name=mRNA_L-digitata_M_contig101361.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=297bp MNNAMIARGPDGEGFWLADDARTGFAHRRLSIIDLTDSGAQPMQMDGGRLback to top mRNA from alignment at L-digitata_M_contig101361:2..919- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101361.1.1 ID=mRNA_L-digitata_M_contig101361.1.1|Name=mRNA_L-digitata_M_contig101361.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=918bp|location=Sequence derived from alignment at L-digitata_M_contig101361:2..919- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101361:2..919- >mRNA_L-digitata_M_contig101361.1.1 ID=mRNA_L-digitata_M_contig101361.1.1|Name=mRNA_L-digitata_M_contig101361.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=891bp|location=Sequence derived from alignment at L-digitata_M_contig101361:2..919- (Laminaria digitata LdigPH10_18mv male)back to top |